AlfalfaGEDB | MsG0380013219.01

M. sativa cultivar ZhongmuNo.1 / MsG0380013219.01

KEGG: -
GO: GO:0009405 GO:0045735
PFAM: PF08027

Nr:

Query id	Subject id	identity %	alignment length	mis matches	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013219.01.T02	XP_013459315.1	60.606	66	26	1	66	32	97	4.94E-21	91.3
MsG0380013219.01.T01	XP_013459315.1	62.887	97	36	1	97	1	97	2.90E-36	131
MsG0380013219.01.T03	XP_013459315.1	59.016	61	25	1	61	37	97	1.83E-18	84.3

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013219.01.T01	Q39837	41.573	89	48	2	9	97	1	85	4.47E-16	71.6
MsG0380013219.01.T02	Q39837	45.902	61	32	1	6	66	26	85	4.37E-12	60.1
MsG0380013219.01.T03	Q39837	45.902	61	32	1	1	61	26	85	4.05E-12	60.1

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013219.01.T01	I3T793	62.887	97	36	1	97	1	97	1.39e-36	131
MsG0380013219.01.T02	I3T793	60.606	66	26	1	66	32	97	2.36e-21	91.3
MsG0380013219.01.T03	I3T793	59.016	61	25	1	61	37	97	8.75e-19	84.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048633.01	MsG0380013219.01	0.836225	1.060138e-56	1.327682e-53
MsG0080048652.01	MsG0380013219.01	0.825481	4.578816e-54	4.178453e-51
MsG0080048887.01	MsG0380013219.01	-0.803459	3.451573e-49	1.735429e-46
MsG0080048889.01	MsG0380013219.01	0.813349	2.677224e-51	1.744148e-48
MsG0180000367.01	MsG0380013219.01	0.819094	1.391223e-52	1.060413e-49
MsG0180001079.01	MsG0380013219.01	0.846080	2.719362e-59	4.626496e-56
MsG0180001497.01	MsG0380013219.01	0.809320	2.005343e-50	1.173724e-47
MsG0180001503.01	MsG0380013219.01	0.809236	2.090359e-50	1.220766e-47
MsG0180002808.01	MsG0380013219.01	0.804425	2.173639e-49	1.120313e-46
MsG0180002935.01	MsG0380013219.01	0.806478	8.068968e-50	4.384070e-47
MsG0180003372.01	MsG0380013219.01	0.824599	7.395428e-54	6.581924e-51
MsG0180003375.01	MsG0380013219.01	0.835041	2.113570e-56	2.553879e-53
MsG0180003484.01	MsG0380013219.01	0.846227	2.479174e-59	4.237841e-56
MsG0180004787.01	MsG0380013219.01	-0.810593	1.067015e-50	6.458526e-48
MsG0180005353.01	MsG0380013219.01	0.826532	2.576466e-54	2.422668e-51
MsG0180005757.01	MsG0380013219.01	0.826620	2.454634e-54	2.313939e-51
MsG0180006191.01	MsG0380013219.01	0.801451	8.950897e-49	4.276004e-46
MsG0280010617.01	MsG0380013219.01	0.806089	9.743871e-50	5.241840e-47
MsG0280011267.01	MsG0380013219.01	0.800429	1.447105e-48	6.736869e-46
MsG0280011269.01	MsG0380013219.01	0.828801	7.347028e-55	7.379697e-52
MsG0380012889.01	MsG0380013219.01	0.832492	9.164632e-56	1.026026e-52
MsG0380013212.01	MsG0380013219.01	0.861406	1.049432e-63	2.966468e-60
MsG0380013213.01	MsG0380013219.01	0.888830	4.168849e-73	3.280586e-69
MsG0380013214.01	MsG0380013219.01	0.931220	5.207400e-94	3.240990e-89
MsG0380013219.01	MsG0380013226.01	0.922173	1.386524e-88	5.164069e-84
MsG0380013219.01	MsG0380013239.01	0.908724	1.250502e-81	2.352572e-77
MsG0380013219.01	MsG0380013415.01	0.808809	2.580036e-50	1.489538e-47
MsG0380013219.01	MsG0380014410.01	0.832586	8.684849e-56	9.750417e-53
MsG0380013219.01	MsG0380014642.01	-0.806173	9.353938e-50	5.043042e-47
MsG0380013219.01	MsG0380014735.01	-0.806667	7.360809e-50	4.018396e-47
MsG0380013219.01	MsG0380015660.01	0.808544	2.939192e-50	1.685243e-47
MsG0380013219.01	MsG0380016372.01	0.814063	1.864173e-51	1.238210e-48
MsG0380013219.01	MsG0380016456.01	-0.805384	1.370402e-49	7.239875e-47
MsG0380013219.01	MsG0380017918.01	-0.817079	3.971470e-52	2.863920e-49
MsG0380013219.01	MsG0480018406.01	0.804983	1.662669e-49	8.694198e-47
MsG0380013219.01	MsG0480018439.01	0.806761	7.032181e-50	3.848476e-47
MsG0380013219.01	MsG0480018440.01	0.803091	4.112188e-49	2.048027e-46
MsG0380013219.01	MsG0480018559.01	0.800870	1.176733e-48	5.539650e-46
MsG0380013219.01	MsG0480019666.01	0.834487	2.913043e-56	3.462253e-53
MsG0380013219.01	MsG0480020814.01	0.827106	1.879263e-54	1.796668e-51
MsG0380013219.01	MsG0480021129.01	0.801588	8.390303e-49	4.021880e-46
MsG0380013219.01	MsG0480021133.01	0.820332	7.252457e-53	5.721603e-50
MsG0380013219.01	MsG0480021604.01	0.815232	1.027424e-51	7.043335e-49
MsG0380013219.01	MsG0480022428.01	0.808218	3.450458e-50	1.961568e-47
MsG0380013219.01	MsG0480023067.01	0.809064	2.276339e-50	1.323206e-47
MsG0380013219.01	MsG0480023195.01	0.808326	3.272123e-50	1.865546e-47
MsG0380013219.01	MsG0480023322.01	0.841199	5.490627e-58	8.007550e-55
MsG0380013219.01	MsG0480023429.01	0.808129	3.604191e-50	2.044127e-47
MsG0380013219.01	MsG0580025007.01	0.824722	6.918010e-54	6.178893e-51
MsG0380013219.01	MsG0580025023.01	0.823110	1.652149e-53	1.409519e-50
MsG0380013219.01	MsG0580025024.01	0.813778	2.155053e-51	1.420314e-48
MsG0380013219.01	MsG0580025105.01	-0.812018	5.234641e-51	3.290628e-48
MsG0380013219.01	MsG0580025117.01	0.801084	1.064070e-48	5.036621e-46
MsG0380013219.01	MsG0580025193.01	0.816904	4.348133e-52	3.120532e-49
MsG0380013219.01	MsG0580026148.01	0.840993	6.219115e-58	9.012172e-55
MsG0380013219.01	MsG0580027036.01	0.811883	5.603838e-51	3.509733e-48
MsG0380013219.01	MsG0580027276.01	-0.805557	1.260472e-49	6.688767e-47
MsG0380013219.01	MsG0580028302.01	0.808278	3.349699e-50	1.907364e-47
MsG0380013219.01	MsG0580029518.01	0.819987	8.699325e-53	6.798052e-50
MsG0380013219.01	MsG0680030960.01	0.806535	7.848699e-50	4.270601e-47
MsG0380013219.01	MsG0680031841.01	0.813932	1.992761e-51	1.318848e-48
MsG0380013219.01	MsG0680033467.01	0.813943	1.981091e-51	1.311523e-48
MsG0380013219.01	MsG0680034418.01	0.800748	1.245987e-48	5.847374e-46
MsG0380013219.01	MsG0680034974.01	0.823936	1.059207e-53	9.249661e-51
MsG0380013219.01	MsG0680034978.01	0.821485	3.937466e-53	3.207555e-50
MsG0380013219.01	MsG0780036054.01	0.814771	1.300371e-51	8.803543e-49
MsG0380013219.01	MsG0780036376.01	0.804816	1.801170e-49	9.378634e-47
MsG0380013219.01	MsG0780036649.01	0.802044	6.761721e-49	3.279093e-46
MsG0380013219.01	MsG0780036839.01	0.808786	2.610213e-50	1.506021e-47
MsG0380013219.01	MsG0780036890.01	0.805637	1.212801e-49	6.449252e-47
MsG0380013219.01	MsG0780038305.01	0.815903	7.281935e-52	5.084685e-49
MsG0380013219.01	MsG0780038307.01	0.861432	1.030535e-63	2.915756e-60
MsG0380013219.01	MsG0780038519.01	0.832439	9.447172e-56	1.055969e-52
MsG0380013219.01	MsG0780038722.01	0.800084	1.701397e-48	7.851310e-46
MsG0380013219.01	MsG0780038914.01	0.820623	6.221560e-53	4.947667e-50
MsG0380013219.01	MsG0780039237.01	0.814412	1.560984e-51	1.046746e-48
MsG0380013219.01	MsG0780039431.01	0.834613	2.707997e-56	3.230590e-53
MsG0380013219.01	MsG0780039883.01	0.833234	5.995877e-56	6.862780e-53
MsG0380013219.01	MsG0780039916.01	0.836257	1.040232e-56	1.304040e-53
MsG0380013219.01	MsG0780039923.01	0.835517	1.602473e-56	1.964191e-53
MsG0380013219.01	MsG0780039979.01	0.804175	2.450050e-49	1.254744e-46
MsG0380013219.01	MsG0780040670.01	0.819055	1.419826e-52	1.081081e-49
MsG0380013219.01	MsG0780040977.01	0.813684	2.259714e-51	1.485593e-48
MsG0380013219.01	MsG0780040991.01	0.801715	7.900546e-49	3.799420e-46
MsG0380013219.01	MsG0780041036.01	0.828506	8.655807e-55	8.620890e-52
MsG0380013219.01	MsG0780041100.01	0.803646	3.156537e-49	1.594717e-46
MsG0380013219.01	MsG0780041180.01	0.804064	2.584313e-49	1.319810e-46
MsG0380013219.01	MsG0780041403.01	0.817418	3.331763e-52	2.425126e-49
MsG0380013219.01	MsG0880041978.01	0.807051	6.105428e-50	3.366551e-47
MsG0380013219.01	MsG0880042122.01	0.839642	1.402773e-57	1.949270e-54
MsG0380013219.01	MsG0880042633.01	0.808021	3.800600e-50	2.149332e-47
MsG0380013219.01	MsG0880043530.01	0.819527	1.108565e-52	8.552261e-50
MsG0380013219.01	MsG0880043550.01	0.824489	7.853437e-54	6.966413e-51
MsG0380013219.01	MsG0880044317.01	-0.810348	1.205097e-50	7.246920e-48
MsG0380013219.01	MsG0880045703.01	-0.814833	1.259646e-51	8.542446e-49
MsG0380013219.01	MsG0880045854.01	0.851826	6.889151e-61	1.411787e-57
MsG0380013219.01	MsG0880046402.01	0.800793	1.220060e-48	5.732100e-46
MsG0380013219.01	MsG0880046463.01	0.808106	3.645127e-50	2.066045e-47
MsG0380013219.01	MsG0880046838.01	-0.808394	3.164248e-50	1.807226e-47
MsG0380013219.01	MsG0880046932.01	0.805146	1.536714e-49	8.069442e-47
MsG0380013219.01	MsG0880047450.01	0.800270	1.559168e-48	7.229061e-46
MsG0380013219.01	MsG0880047493.01	0.812684	3.746250e-51	2.397441e-48
MsG0380013219.01	MsG0880047697.01	0.844508	7.239517e-59	1.171344e-55
MsG0380013219.01	MsG0880047714.01	0.832543	8.903903e-56	9.983257e-53
MsG0280007678.01	MsG0380013219.01	0.832091	1.152194e-55	1.274636e-52
MsG0280007786.01	MsG0380013219.01	0.809142	2.190190e-50	1.275834e-47
MsG0280008226.01	MsG0380013219.01	0.828100	1.084275e-54	1.067207e-51
MsG0280008495.01	MsG0380013219.01	0.803288	3.744757e-49	1.874514e-46
MsG0280008659.01	MsG0380013219.01	0.801348	9.393572e-49	4.475904e-46
MsG0280009253.01	MsG0380013219.01	0.813999	1.926142e-51	1.277095e-48
MsG0280010425.01	MsG0380013219.01	0.836441	9.339302e-57	1.177100e-53

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380013219.01.T02	MTR_3g436100	60.606	66	26	0	1	66	32	97	5.99e-25	91.3
MsG0380013219.01.T02	MTR_8g022430	54.098	61	26	2	6	66	34	92	5.08e-16	68.2
MsG0380013219.01.T02	MTR_7g044920	42.424	66	36	1	3	66	29	94	4.51e-15	65.9
MsG0380013219.01.T02	MTR_6g017150	50.820	61	27	2	6	66	35	92	4.69e-15	65.5
MsG0380013219.01.T02	MTR_6g017170	45.902	61	31	2	6	66	34	92	1.40e-11	56.2
MsG0380013219.01.T01	MTR_3g436100	62.887	97	36	0	1	97	1	97	3.52e-40	131
MsG0380013219.01.T01	MTR_8g022430	48.454	97	45	3	1	97	1	92	3.56e-24	90.1
MsG0380013219.01.T01	MTR_5g464350	66.129	62	21	0	1	62	1	62	1.07e-22	84.3
MsG0380013219.01.T01	MTR_5g464490	74.545	55	14	0	1	55	1	55	2.77e-22	83.2
MsG0380013219.01.T01	MTR_7g044920	44.444	99	48	3	1	97	1	94	9.22e-21	81.6
MsG0380013219.01.T01	MTR_6g017150	44.898	98	47	4	1	97	1	92	5.53e-20	79.3
MsG0380013219.01.T01	MTR_0112s0050	63.492	63	22	1	1	63	1	62	4.82e-19	75.1
MsG0380013219.01.T01	MTR_6g017170	44.330	97	49	3	1	97	1	92	5.76e-19	76.6
MsG0380013219.01.T01	MTR_5g464390	60.656	61	24	0	1	61	1	61	1.44e-18	73.9
MsG0380013219.01.T01	MTR_0416s0030	58.462	65	27	0	1	65	1	65	4.59e-18	72.4
MsG0380013219.01.T01	MTR_5g464590	58.730	63	24	2	1	61	1	63	9.69e-18	71.6
MsG0380013219.01.T01	MTR_7g056803	40.816	98	53	3	1	97	1	94	5.07e-17	71.6
MsG0380013219.01.T01	MTR_5g464540	55.385	65	28	1	1	65	1	64	4.72e-16	67.4
MsG0380013219.01.T01	MTR_7g044980	41.237	97	47	5	1	97	1	87	3.45e-15	67.4
MsG0380013219.01.T01	MTR_8g022400	39.175	97	54	3	1	97	1	92	5.47e-15	66.6
MsG0380013219.01.T01	MTR_0093s0090	57.895	57	23	1	1	57	1	56	1.60e-14	63.5
MsG0380013219.01.T01	MTR_8g022420	40.816	98	50	4	1	97	1	91	1.61e-14	65.5
MsG0380013219.01.T01	MTR_3g067540	41.748	103	47	4	1	97	1	96	1.87e-14	65.1
MsG0380013219.01.T01	MTR_3g067555	41.748	103	47	4	1	97	1	96	1.87e-14	65.1
MsG0380013219.01.T01	MTR_7g056817	41.000	100	51	5	1	97	1	95	3.53e-14	64.3
MsG0380013219.01.T01	MTR_3g067430	37.255	102	53	5	1	97	1	96	5.30e-14	63.9
MsG0380013219.01.T01	MTR_3g067437	39.216	102	47	4	1	97	1	92	1.70e-13	62.4
MsG0380013219.01.T01	MTR_3g067270	41.237	97	50	4	1	97	1	90	4.97e-13	61.6
MsG0380013219.01.T01	MTR_3g467750	41.237	97	50	4	1	97	1	90	4.97e-13	61.6
MsG0380013219.01.T01	MTR_6g036620	42.857	98	47	5	1	97	1	90	6.16e-13	61.2
MsG0380013219.01.T01	MTR_0112s0040	83.333	36	5	1	1	35	1	36	1.35e-12	58.2
MsG0380013219.01.T01	MTR_3g438170	80.000	35	7	0	1	35	1	35	2.80e-12	57.0
MsG0380013219.01.T01	MTR_3g438140	80.000	35	7	0	1	35	1	35	2.80e-12	57.0
MsG0380013219.01.T01	MTR_3g067535	39.604	101	50	4	1	97	1	94	2.24e-11	57.0
MsG0380013219.01.T03	MTR_3g436100	59.016	61	25	0	1	61	37	97	2.22e-22	84.3
MsG0380013219.01.T03	MTR_8g022430	54.098	61	26	2	1	61	34	92	5.22e-16	67.8
MsG0380013219.01.T03	MTR_6g017150	50.820	61	27	2	1	61	35	92	4.57e-15	65.5
MsG0380013219.01.T03	MTR_7g044920	42.857	63	34	1	1	61	32	94	3.07e-14	63.5
MsG0380013219.01.T03	MTR_6g017170	45.902	61	31	2	1	61	34	92	1.31e-11	56.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 28 sgRNAs with CRISPR-Local

Find 39 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATATTATGTTCAGAACTAAT+TGG	0.232965	3:+33076783	None:intergenic
CCTAATGCTGATATTGAATA+TGG	0.285356	3:-33076676	MsG0380013219.01.T01:CDS
AGCAGGGAGCTGTCCGTCTC+AGG	0.357261	3:-33076901	MsG0380013219.01.T01:CDS
TTATGTTAAGCTTGCTACTT+TGG	0.363249	3:-33077177	MsG0380013219.01.T01:CDS
AGATTGTAGTTGTATCCCTT+GGG	0.363389	3:-33076832	MsG0380013219.01.T01:CDS
CTGCTTCAACGTTCTTCGTC+TGG	0.376847	3:+33076919	None:intergenic
GAGATTGTAGTTGTATCCCT+TGG	0.382260	3:-33076833	MsG0380013219.01.T01:CDS
CACTTCCCTTCTTGATGCCT+CGG	0.398451	3:+33076719	None:intergenic
CCATATTCAATATCAGCATT+AGG	0.437256	3:+33076676	None:intergenic
CAAGTCAAATATTGAACAAA+AGG	0.441013	3:+33076875	None:intergenic
CAGACGAAGAACGTTGAAGC+AGG	0.486278	3:-33076918	MsG0380013219.01.T01:CDS
CGAGGCATCAAGAAGGGAAG+TGG	0.505162	3:-33076718	MsG0380013219.01.T01:CDS
CTCATGCCGAGGCATCAAGA+AGG	0.570754	3:-33076725	MsG0380013219.01.T01:CDS
GATTGTAGTTGTATCCCTTG+GGG	0.572574	3:-33076831	MsG0380013219.01.T01:CDS
GCAGGGAGCTGTCCGTCTCA+GGG	0.576016	3:-33076900	MsG0380013219.01.T01:CDS
TCATGCCGAGGCATCAAGAA+GGG	0.594673	3:-33076724	MsG0380013219.01.T01:CDS
ATGCTGATATTGAATATGGA+TGG	0.600385	3:-33076672	MsG0380013219.01.T01:CDS
ACAAATATACATACAGAATG+TGG	0.609862	3:+33077139	None:intergenic
ATATTTGACTTGACACCATG+CGG	0.621402	3:-33076864	MsG0380013219.01.T01:CDS
CGTTCTGCTTCATCTACAGA+GGG	0.621559	3:+33076644	None:intergenic
GAACAAAAGGAACCCTGAGA+CGG	0.632996	3:+33076888	None:intergenic
AGACGAAGAACGTTGAAGCA+GGG	0.637674	3:-33076917	MsG0380013219.01.T01:CDS
GAGGCATCAAGAAGGGAAGT+GGG	0.644826	3:-33076717	MsG0380013219.01.T01:CDS
CAATCTCTGAGATTGCCGCA+TGG	0.655920	3:+33076849	None:intergenic
ACGTTCTGCTTCATCTACAG+AGG	0.657683	3:+33076643	None:intergenic
ATTGTAGTTGTATCCCTTGG+GGG	0.670258	3:-33076830	MsG0380013219.01.T01:CDS
ACATAATATGAAGATGATCG+AGG	0.692790	3:-33076769	MsG0380013219.01.T01:CDS
CTTATGCAAAACTCATGCCG+AGG	0.694126	3:-33076736	MsG0380013219.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TATGTATATTTGTTTAACAT+GGG	-	Chr3:33076706-33076725	MsG0380013219.01.T01:CDS	15.0%
!!	ATATTATGTTCAGAACTAAT+TGG	+	Chr3:33077055-33077074	None:intergenic	20.0%
!!	ATCGATATATATTATGTGTT+AGG	-	Chr3:33076741-33076760	MsG0380013219.01.T01:CDS	20.0%
!!	ATGTATATATTACGAAAGTT+TGG	+	Chr3:33076841-33076860	None:intergenic	20.0%
!!	GTATGTATATTTGTTTAACA+TGG	-	Chr3:33076705-33076724	MsG0380013219.01.T01:CDS	20.0%
!	ACAAATATACATACAGAATG+TGG	+	Chr3:33076699-33076718	None:intergenic	25.0%
!	ACACATAATATATATCGATG+AGG	+	Chr3:33076740-33076759	None:intergenic	25.0%
!	CAAGTCAAATATTGAACAAA+AGG	+	Chr3:33076963-33076982	None:intergenic	25.0%
	ACATAATATGAAGATGATCG+AGG	-	Chr3:33077066-33077085	MsG0380013219.01.T01:intron	30.0%
	ATGCTGATATTGAATATGGA+TGG	-	Chr3:33077163-33077182	MsG0380013219.01.T01:CDS	30.0%
	CCATATTCAATATCAGCATT+AGG	+	Chr3:33077162-33077181	None:intergenic	30.0%
	CCTAATGCTGATATTGAATA+TGG	-	Chr3:33077159-33077178	MsG0380013219.01.T01:CDS	30.0%
	TACATTATTCACACGTGTAT+CGG	-	Chr3:33076856-33076875	MsG0380013219.01.T01:CDS	30.0%
!!	TTATGTTAAGCTTGCTACTT+TGG	-	Chr3:33076658-33076677	MsG0380013219.01.T01:CDS	30.0%
	AATGGCAAAGGCAGTTAAAT+TGG	+	Chr3:33076884-33076903	None:intergenic	35.0%
	AGATTGTAGTTGTATCCCTT+GGG	-	Chr3:33077003-33077022	MsG0380013219.01.T01:intron	35.0%
!	GCATGAGTTTTGCATAAGTT+AGG	+	Chr3:33077097-33077116	None:intergenic	35.0%
!!	ATATTTGACTTGACACCATG+CGG	-	Chr3:33076971-33076990	MsG0380013219.01.T01:intron	35.0%
	ACGATTACTGCAAATGGCAA+AGG	+	Chr3:33076896-33076915	None:intergenic	40.0%
	ATTGTAGTTGTATCCCTTGG+GGG	-	Chr3:33077005-33077024	MsG0380013219.01.T01:intron	40.0%
	GAGATTGTAGTTGTATCCCT+TGG	-	Chr3:33077002-33077021	MsG0380013219.01.T01:intron	40.0%
	GATTGTAGTTGTATCCCTTG+GGG	-	Chr3:33077004-33077023	MsG0380013219.01.T01:intron	40.0%
	TACCAAAAAATAGCCCCCAA+GGG	+	Chr3:33077021-33077040	None:intergenic	40.0%
	AGACGAAGAACGTTGAAGCA+GGG	-	Chr3:33076918-33076937	MsG0380013219.01.T01:CDS	45.0%
	CTTATGCAAAACTCATGCCG+AGG	-	Chr3:33077099-33077118	MsG0380013219.01.T01:intron	45.0%
	GAACAAAAGGAACCCTGAGA+CGG	+	Chr3:33076950-33076969	None:intergenic	45.0%
	GTACCAAAAAATAGCCCCCA+AGG	+	Chr3:33077022-33077041	None:intergenic	45.0%
	GTCTGGACGATTACTGCAAA+TGG	+	Chr3:33076902-33076921	None:intergenic	45.0%
!!!	ATCCCTTGGGGGCTATTTTT+TGG	-	Chr3:33077016-33077035	MsG0380013219.01.T01:intron	45.0%
	CACTTCCCTTCTTGATGCCT+CGG	+	Chr3:33077119-33077138	None:intergenic	50.0%
	CAGACGAAGAACGTTGAAGC+AGG	-	Chr3:33076917-33076936	MsG0380013219.01.T01:CDS	50.0%
	CTGCTTCAACGTTCTTCGTC+TGG	+	Chr3:33076919-33076938	None:intergenic	50.0%
!	GAGGCATCAAGAAGGGAAGT+GGG	-	Chr3:33077118-33077137	MsG0380013219.01.T01:intron	50.0%
!	TCATGCCGAGGCATCAAGAA+GGG	-	Chr3:33077111-33077130	MsG0380013219.01.T01:intron	50.0%
!!	CAATCTCTGAGATTGCCGCA+TGG	+	Chr3:33076989-33077008	None:intergenic	50.0%
!	CGAGGCATCAAGAAGGGAAG+TGG	-	Chr3:33077117-33077136	MsG0380013219.01.T01:intron	55.0%
!	CTCATGCCGAGGCATCAAGA+AGG	-	Chr3:33077110-33077129	MsG0380013219.01.T01:intron	55.0%
	AGCAGGGAGCTGTCCGTCTC+AGG	-	Chr3:33076934-33076953	MsG0380013219.01.T01:intron	65.0%
	GCAGGGAGCTGTCCGTCTCA+GGG	-	Chr3:33076935-33076954	MsG0380013219.01.T01:intron	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	33076653	33077204	33076653	ID=MsG0380013219.01;Name=MsG0380013219.01
Chr3	mRNA	33076653	33077204	33076653	ID=MsG0380013219.01.T01;Parent=MsG0380013219.01;Name=MsG0380013219.01.T01;_AED=0.50;_eAED=0.52;_QI=0\|0\|0\|1\|0\|0\|2\|0\|115
Chr3	exon	33077153	33077204	33077153	ID=MsG0380013219.01.T01:exon:6338;Parent=MsG0380013219.01.T01
Chr3	exon	33076653	33076948	33076653	ID=MsG0380013219.01.T01:exon:6339;Parent=MsG0380013219.01.T01
Chr3	CDS	33077153	33077204	33077153	ID=MsG0380013219.01.T01:cds;Parent=MsG0380013219.01.T01
Chr3	CDS	33076653	33076948	33076653	ID=MsG0380013219.01.T01:cds;Parent=MsG0380013219.01.T01
Chr3	mRNA	33076653	33076907	33076653	ID=MsG0380013219.01.T02;Parent=MsG0380013219.01;Name=MsG0380013219.01.T02;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|84
Chr3	exon	33076653	33076907	33076653	ID=MsG0380013219.01.T02:exon:6340;Parent=MsG0380013219.01.T02
Chr3	CDS	33076653	33076907	33076653	ID=MsG0380013219.01.T02:cds;Parent=MsG0380013219.01.T02
Chr3	mRNA	33076653	33076892	33076653	ID=MsG0380013219.01.T03;Parent=MsG0380013219.01;Name=MsG0380013219.01.T03;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|79
Chr3	exon	33076653	33076892	33076653	ID=MsG0380013219.01.T03:exon:6341;Parent=MsG0380013219.01.T03
Chr3	CDS	33076653	33076892	33076653	ID=MsG0380013219.01.T03:cds;Parent=MsG0380013219.01.T03

Gene Sequence

>MsG0380013219.01.T02

TCTCAGGGTTCCTTTTGTTCAATATTTGACTTGACACCATGCGGCAATCTCAGAGATTGTAGTTGTATCCCTTGGGGGCTATTTTTTGGTACTTGCACAAATCCAATTAGTTCTGAACATAATATGAAGATGATCGAGGAACATCCTAACTTATGCAAAACTCATGCCGAGGCATCAAGAAGGGAAGTGGGAACTTTTGTGCTCGTTATCCTAATGCTGATATTGAATATGGATGGTTTTTCCCTCTGTAGATGA

>MsG0380013219.01.T01

ATGACTTATGTTAAGCTTGCTACTTTGGCTGTCTTCATGCTCACCACATTCTTAATCGTCCAGACGAAGAACGTTGAAGCAGGGAGCTGTCCGTCTCAGGGTTCCTTTTGTTCAATATTTGACTTGACACCATGCGGCAATCTCAGAGATTGTAGTTGTATCCCTTGGGGGCTATTTTTTGGTACTTGCACAAATCCAATTAGTTCTGAACATAATATGAAGATGATCGAGGAACATCCTAACTTATGCAAAACTCATGCCGAGGCATCAAGAAGGGAAGTGGGAACTTTTGTGCTCGTTATCCTAATGCTGATATTGAATATGGATGGTTTTTCCCTCTGTAGATGA

>MsG0380013219.01.T03

TGTTCAATATTTGACTTGACACCATGCGGCAATCTCAGAGATTGTAGTTGTATCCCTTGGGGGCTATTTTTTGGTACTTGCACAAATCCAATTAGTTCTGAACATAATATGAAGATGATCGAGGAACATCCTAACTTATGCAAAACTCATGCCGAGGCATCAAGAAGGGAAGTGGGAACTTTTGTGCTCGTTATCCTAATGCTGATATTGAATATGGATGGTTTTTCCCTCTGTAGATGA

Protein sequence

>MsG0380013219.01.T02

SQGSFCSIFDLTPCGNLRDCSCIPWGLFFGTCTNPISSEHNMKMIEEHPNLCKTHAEASRREVGTFVLVILMLILNMDGFSLCR*

>MsG0380013219.01.T01

MTYVKLATLAVFMLTTFLIVQTKNVEAGSCPSQGSFCSIFDLTPCGNLRDCSCIPWGLFFGTCTNPISSEHNMKMIEEHPNLCKTHAEASRREVGTFVLVILMLILNMDGFSLCR*

>MsG0380013219.01.T03

CSIFDLTPCGNLRDCSCIPWGLFFGTCTNPISSEHNMKMIEEHPNLCKTHAEASRREVGTFVLVILMLILNMDGFSLCR*