AlfalfaGEDB | MsG0480020501.01

M. sativa cultivar ZhongmuNo.1 / MsG0480020501.01

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480020501.01.T02	XP_024636833.1	63.95	319	35	6	1	241	1	317	2.23E-120	355
MsG0480020501.01.T01	XP_024636833.1	63.95	319	35	6	1	241	1	317	2.23E-120	355

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480020501.01.T01	A0A396I6X6	63.950	319	35	6	1	241	1	317	1.06e-120	355
MsG0480020501.01.T02	A0A396I6X6	63.950	319	35	6	1	241	1	317	1.06e-120	355

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048727.01	MsG0480020501.01	0.814901	1.216455e-51	8.264564e-49
MsG0080048820.01	MsG0480020501.01	0.804795	1.820122e-49	9.471740e-47
MsG0080048993.01	MsG0480020501.01	0.813318	2.719599e-51	1.770209e-48
MsG0180000489.01	MsG0480020501.01	0.817588	3.050634e-52	2.230725e-49
MsG0180000491.01	MsG0480020501.01	0.804121	2.514367e-49	1.285929e-46
MsG0180000549.01	MsG0480020501.01	0.847042	1.485315e-59	2.606748e-56
MsG0180000792.01	MsG0480020501.01	0.801487	8.797872e-49	4.206806e-46
MsG0180000793.01	MsG0480020501.01	0.846415	2.204215e-59	3.791284e-56
MsG0180000833.01	MsG0480020501.01	0.829386	5.299378e-55	5.415901e-52
MsG0180000834.01	MsG0480020501.01	0.830571	2.724451e-55	2.881493e-52
MsG0180001138.01	MsG0480020501.01	0.813963	1.961137e-51	1.299060e-48
MsG0180003526.01	MsG0480020501.01	0.818678	1.729495e-52	1.303153e-49
MsG0180004017.01	MsG0480020501.01	0.826021	3.409997e-54	3.160257e-51
MsG0180005283.01	MsG0480020501.01	0.815847	7.493166e-52	5.224173e-49
MsG0180005612.01	MsG0480020501.01	0.882755	7.985766e-71	4.925776e-67
MsG0180006136.01	MsG0480020501.01	0.807496	4.913311e-50	2.740842e-47
MsG0180006176.01	MsG0480020501.01	0.810250	1.265211e-50	7.589057e-48
MsG0280006400.01	MsG0480020501.01	0.841217	5.431112e-58	7.924952e-55
MsG0280006401.01	MsG0480020501.01	0.836819	7.481246e-57	9.536675e-54
MsG0380012567.01	MsG0480020501.01	0.805315	1.416745e-49	7.471667e-47
MsG0380012804.01	MsG0480020501.01	0.812429	4.259387e-51	2.707692e-48
MsG0380014909.01	MsG0480020501.01	0.838231	3.252202e-57	4.328024e-54
MsG0480018592.01	MsG0480020501.01	0.808706	2.714178e-50	1.562755e-47
MsG0480018676.01	MsG0480020501.01	0.857988	1.121241e-62	2.818923e-59
MsG0480018910.01	MsG0480020501.01	0.806206	9.207206e-50	4.968173e-47
MsG0480018997.01	MsG0480020501.01	0.821220	4.532439e-53	3.665398e-50
MsG0480019501.01	MsG0480020501.01	0.814510	1.485235e-51	9.985825e-49
MsG0480019641.01	MsG0480020501.01	0.813966	1.958237e-51	1.297275e-48
MsG0480020151.01	MsG0480020501.01	0.817417	3.334064e-52	2.426708e-49
MsG0480020229.01	MsG0480020501.01	0.836706	7.997312e-57	1.015955e-53
MsG0480020473.01	MsG0480020501.01	0.826589	2.496413e-54	2.351172e-51
MsG0480020501.01	MsG0480020502.01	0.919994	2.240107e-87	7.410639e-83
MsG0480020501.01	MsG0480021168.01	0.800828	1.199759e-48	5.642003e-46
MsG0480020501.01	MsG0480021248.01	0.827197	1.786853e-54	1.713065e-51
MsG0480020501.01	MsG0480021795.01	0.826990	2.002981e-54	1.908533e-51
MsG0480020501.01	MsG0480022088.01	0.831518	1.594970e-55	1.735000e-52
MsG0480020501.01	MsG0480022130.01	0.802024	6.825073e-49	3.308162e-46
MsG0480020501.01	MsG0480022161.01	0.863264	2.817924e-64	8.492153e-61
MsG0480020501.01	MsG0480022162.01	0.800738	1.251996e-48	5.874143e-46
MsG0480020501.01	MsG0480023148.01	0.811737	6.026994e-51	3.760379e-48
MsG0480020501.01	MsG0480023166.01	0.822033	2.940478e-53	2.432816e-50
MsG0480020501.01	MsG0480023351.01	0.815916	7.232701e-52	5.052178e-49
MsG0480020501.01	MsG0480023452.01	0.841797	3.820348e-58	5.676320e-55
MsG0480020501.01	MsG0480023704.01	0.803718	3.050143e-49	1.543786e-46
MsG0480020501.01	MsG0480023821.01	0.827633	1.404741e-54	1.363702e-51
MsG0480020501.01	MsG0580024285.01	0.815997	6.937806e-52	4.857180e-49
MsG0480020501.01	MsG0580024487.01	0.806235	9.078771e-50	4.902477e-47
MsG0480020501.01	MsG0580025589.01	0.806079	9.792782e-50	5.266766e-47
MsG0480020501.01	MsG0580026498.01	0.801485	8.807946e-49	4.211348e-46
MsG0480020501.01	MsG0580028306.01	0.803642	3.161783e-49	1.597229e-46
MsG0480020501.01	MsG0580029862.01	0.816090	6.613965e-52	4.642295e-49
MsG0480020501.01	MsG0680030514.01	0.812831	3.478931e-51	2.234743e-48
MsG0480020501.01	MsG0680030516.01	0.814686	1.357967e-51	9.172751e-49
MsG0480020501.01	MsG0680030858.01	0.816414	5.599366e-52	3.964889e-49
MsG0480020501.01	MsG0680030957.01	0.812546	4.016066e-51	2.560867e-48
MsG0480020501.01	MsG0680032160.01	0.835801	1.357677e-56	1.678352e-53
MsG0480020501.01	MsG0680032496.01	0.813515	2.461736e-51	1.611008e-48
MsG0480020501.01	MsG0780036792.01	0.800474	1.417167e-48	6.604573e-46
MsG0480020501.01	MsG0780037351.01	0.815262	1.011778e-51	6.941882e-49
MsG0480020501.01	MsG0780037363.01	0.800509	1.394127e-48	6.503029e-46
MsG0480020501.01	MsG0780038986.01	0.806842	6.760004e-50	3.707450e-47
MsG0480020501.01	MsG0780039230.01	0.813197	2.891404e-51	1.875753e-48
MsG0480020501.01	MsG0780039449.01	0.839961	1.158249e-57	1.625714e-54
MsG0480020501.01	MsG0780039853.01	0.811167	8.017240e-51	4.927160e-48
MsG0480020501.01	MsG0780039988.01	0.820487	6.684751e-53	5.296390e-50
MsG0480020501.01	MsG0780040343.01	0.812517	4.073596e-51	2.595569e-48
MsG0480020501.01	MsG0780040404.01	0.800247	1.576504e-48	7.305055e-46
MsG0480020501.01	MsG0780041129.01	0.801245	9.863007e-49	4.687430e-46
MsG0480020501.01	MsG0780041174.01	0.835925	1.263146e-56	1.567336e-53
MsG0480020501.01	MsG0780041272.01	0.803332	3.666311e-49	1.837374e-46
MsG0480020501.01	MsG0780041385.01	0.800844	1.191265e-48	5.604356e-46
MsG0480020501.01	MsG0780041706.01	0.808543	2.941888e-50	1.686708e-47
MsG0480020501.01	MsG0780041730.01	0.808523	2.970188e-50	1.702101e-47
MsG0480020501.01	MsG0780041778.01	0.819407	1.180155e-52	9.073720e-50
MsG0480020501.01	MsG0780041828.01	0.841909	3.568616e-58	5.321227e-55
MsG0480020501.01	MsG0880041931.01	0.826672	2.385804e-54	2.252413e-51
MsG0480020501.01	MsG0880042044.01	0.807879	4.074205e-50	2.295374e-47
MsG0480020501.01	MsG0880043277.01	0.801943	7.092551e-49	3.430646e-46
MsG0480020501.01	MsG0880043278.01	0.826919	2.082945e-54	1.980730e-51
MsG0480020501.01	MsG0880043497.01	0.816527	5.282138e-52	3.751939e-49
MsG0480020501.01	MsG0880044487.01	0.816819	4.542122e-52	3.252210e-49
MsG0480020501.01	MsG0880044595.01	0.856678	2.735227e-62	6.579397e-59
MsG0480020501.01	MsG0880045224.01	0.818070	2.374012e-52	1.759047e-49
MsG0480020501.01	MsG0880045697.01	0.818040	2.411662e-52	1.785453e-49
MsG0480020501.01	MsG0880046051.01	0.824360	8.419110e-54	7.440507e-51
MsG0480020501.01	MsG0880046764.01	0.809971	1.453565e-50	8.655514e-48
MsG0480020501.01	MsG0880046765.01	0.814720	1.334619e-51	9.023647e-49
MsG0480020501.01	MsG0880046791.01	0.811179	7.969477e-51	4.899503e-48
MsG0480020501.01	MsG0880047112.01	0.805001	1.647906e-49	8.620944e-47
MsG0480020501.01	MsG0880047578.01	0.805719	1.165450e-49	6.210918e-47
MsG0480020501.01	MsG0880047770.01	0.813271	2.784808e-51	1.810287e-48
MsG0380016057.01	MsG0480020501.01	0.822139	2.779950e-53	2.307013e-50
MsG0380016058.01	MsG0480020501.01	0.804702	1.903189e-49	9.879839e-47
MsG0380016530.01	MsG0480020501.01	0.803648	3.153746e-49	1.593370e-46
MsG0380016545.01	MsG0480020501.01	0.815083	1.108825e-51	7.570512e-49
MsG0380016578.01	MsG0480020501.01	0.876268	1.598114e-68	7.698764e-65
MsG0380016580.01	MsG0480020501.01	0.865565	5.383521e-65	1.759610e-61
MsG0380016764.01	MsG0480020501.01	0.809634	1.717123e-50	1.013529e-47
MsG0380016870.01	MsG0480020501.01	0.818101	2.336943e-52	1.733010e-49
MsG0380017509.01	MsG0480020501.01	0.801561	8.496886e-49	4.070307e-46
MsG0380017976.01	MsG0480020501.01	0.800886	1.167622e-48	5.499263e-46
MsG0380018037.01	MsG0480020501.01	0.824269	8.842597e-54	7.794331e-51
MsG0480018108.01	MsG0480020501.01	0.807436	5.059013e-50	2.817626e-47
MsG0480018323.01	MsG0480020501.01	0.805631	1.215823e-49	6.464455e-47
MsG0280006571.01	MsG0480020501.01	0.815431	9.276573e-52	6.394600e-49
MsG0280006706.01	MsG0480020501.01	0.823547	1.306038e-53	1.127971e-50
MsG0280006718.01	MsG0480020501.01	0.818377	2.023262e-52	1.512074e-49
MsG0280006825.01	MsG0480020501.01	0.807384	5.189799e-50	2.886603e-47
MsG0280007800.01	MsG0480020501.01	0.812841	3.461440e-51	2.224129e-48
MsG0280007852.01	MsG0480020501.01	0.802312	5.954475e-49	2.907673e-46
MsG0280007853.01	MsG0480020501.01	0.824889	6.320053e-54	5.671768e-51
MsG0280008227.01	MsG0480020501.01	0.816215	6.203912e-52	4.369378e-49
MsG0280008591.01	MsG0480020501.01	0.806053	9.913028e-50	5.328090e-47
MsG0280008709.01	MsG0480020501.01	0.820969	5.177587e-53	4.158103e-50
MsG0280008922.01	MsG0480020501.01	0.812887	3.381031e-51	2.175283e-48
MsG0280008942.01	MsG0480020501.01	0.806838	6.772312e-50	3.713835e-47
MsG0280009430.01	MsG0480020501.01	0.805977	1.028554e-49	5.517668e-47
MsG0280009431.01	MsG0480020501.01	0.814374	1.591403e-51	1.065992e-48
MsG0280009434.01	MsG0480020501.01	0.806619	7.534038e-50	4.108043e-47
MsG0280009436.01	MsG0480020501.01	0.806647	7.431839e-50	4.055113e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480020501.01.T02	MTR_4g052500	62.046	303	35	6	1	225	1	301	5.74e-107	319
MsG0480020501.01.T01	MTR_4g052500	62.046	303	35	6	1	225	1	301	5.74e-107	319

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480020501.01.T02	AT5G22340	43.798	258	71	7	55	241	69	323	3.44e-54	177
MsG0480020501.01.T02	AT5G22340	39.732	224	61	7	55	207	69	289	5.49e-34	125
MsG0480020501.01.T01	AT5G22340	43.798	258	71	7	55	241	69	323	3.44e-54	177
MsG0480020501.01.T01	AT5G22340	39.732	224	61	7	55	207	69	289	5.49e-34	125

Find 23 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CGTTGTTGTACACTTATTTA+AGG	0.190500	4:+42520332	MsG0480020501.01.T01:three_prime_UTR
CTCAGCCTTCAAAATTCTTC+TGG	0.224073	4:-42519928	None:intergenic
CAGCTTGTGCCAGCCATGTT+TGG	0.234831	4:+42519835	MsG0480020501.01.T01:intron
TTCCCTACATCCTCAAATAT+TGG	0.246136	4:+42519994	MsG0480020501.01.T01:three_prime_UTR
AGCTTGTGCCAGCCATGTTT+GGG	0.359430	4:+42519836	MsG0480020501.01.T01:intron
CATCCAATGTATATTATTAG+AGG	0.371654	4:+42520398	MsG0480020501.01.T01:three_prime_UTR
GAGGTAACTGAATATAAATA+TGG	0.420508	4:+42520417	MsG0480020501.01.T01:three_prime_UTR
TATAGAGACAATAAAGACTT+AGG	0.447368	4:+42519895	MsG0480020501.01.T01:CDS
ATGTAAGTAGTGCTTAGTTC+CGG	0.451394	4:-42520033	None:intergenic
TTCCAATATTTGAGGATGTA+GGG	0.453530	4:-42519996	None:intergenic
TTTCCAATATTTGAGGATGT+AGG	0.459665	4:-42519997	None:intergenic
TGGAAATGACCAGCTGCATC+CGG	0.505977	4:+42520014	MsG0480020501.01.T01:three_prime_UTR
AAAGTTCTAACTCATACCAT+TGG	0.509867	4:-42520144	None:intergenic
TGCTTAGTTCCGGATGCAGC+TGG	0.525733	4:-42520023	None:intergenic
CTGGTCATTTCCAATATTTG+AGG	0.526896	4:-42520004	None:intergenic
AAAAGTCTATTTAAGTCCAA+TGG	0.552860	4:+42520128	MsG0480020501.01.T01:intron
ACAAACATCCCAAACATGGC+TGG	0.556898	4:-42519844	None:intergenic
AAGTTTGTAGATATTCTACA+TGG	0.587136	4:+42520308	MsG0480020501.01.T01:three_prime_UTR
TTACCTCTAATAATATACAT+TGG	0.588813	4:-42520401	None:intergenic
TTATATGCAAATGTTAACAG+TGG	0.619404	4:-42520232	None:intergenic
GTAGACAAACATCCCAAACA+TGG	0.634660	4:-42519848	None:intergenic
AAAGTGTGTTCTGCTGAACA+TGG	0.650543	4:-42519972	None:intergenic
CTTAAATAAGTGTACAACAA+CGG	0.677508	4:-42520331	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAAAATTATACTTAATCAT+TGG	+	Chr4:42517028-42517047	MsG0480020501.01.T01:intron	10.0%
!!	TCAAACTAAAAATAAAATAT+TGG	-	Chr4:42516665-42516684	None:intergenic	10.0%
!!!	TGATTAAGTATAATTTTTTT+AGG	-	Chr4:42517027-42517046	None:intergenic	10.0%
!!!	TTTTATTATTTTTCATAGTA+AGG	+	Chr4:42516813-42516832	MsG0480020501.01.T01:intron	10.0%
!!	AACTAAAAATAAAATATTGG+TGG	-	Chr4:42516662-42516681	None:intergenic	15.0%
!!	ACTAAAAATAAAATATTGGT+GGG	-	Chr4:42516661-42516680	None:intergenic	15.0%
!!	TAAAAAATAAAAAAATCAGC+AGG	-	Chr4:42517920-42517939	None:intergenic	15.0%
!!	TGATCAAATATTAAGTTAAT+TGG	-	Chr4:42519000-42519019	None:intergenic	15.0%
!!!	AAATATTTTATAAGCAGAAT+TGG	+	Chr4:42519302-42519321	MsG0480020501.01.T01:CDS	15.0%
!!!	ATATTTTTGTTATAAGATGA+AGG	-	Chr4:42518240-42518259	None:intergenic	15.0%
!!!	CTACTATTGATTTAATAATA+GGG	+	Chr4:42516240-42516259	MsG0480020501.01.T01:CDS	15.0%
!!!	TATGGTTTTCATTTTTTATT+TGG	+	Chr4:42517563-42517582	MsG0480020501.01.T01:intron	15.0%
!!	AAAATACCAAACTTAAAATG+TGG	-	Chr4:42519621-42519640	None:intergenic	20.0%
!!	AAATATGATTAAAGTCGAAT+GGG	+	Chr4:42518552-42518571	MsG0480020501.01.T01:intron	20.0%
!!	AATGTTACAATGTTGTTAAA+TGG	+	Chr4:42516314-42516333	MsG0480020501.01.T01:intron	20.0%
!!	AATTTAACTAGATTTGTACT+TGG	+	Chr4:42518402-42518421	MsG0480020501.01.T01:intron	20.0%
!!	AGAATAGCTTATGTTAAAAA+AGG	+	Chr4:42516701-42516720	MsG0480020501.01.T01:intron	20.0%
!!	ATGATAAGATTAACTTTAGA+TGG	+	Chr4:42518146-42518165	MsG0480020501.01.T01:intron	20.0%
!!	GAAGAAAAAAAATAATTGAG+CGG	-	Chr4:42518126-42518145	None:intergenic	20.0%
!!	GAATAGCTTATGTTAAAAAA+GGG	+	Chr4:42516702-42516721	MsG0480020501.01.T01:intron	20.0%
!!	GCTTCATATTATAACTTTAA+TGG	+	Chr4:42516789-42516808	MsG0480020501.01.T01:intron	20.0%
!!	TAAATATGATTAAAGTCGAA+TGG	+	Chr4:42518551-42518570	MsG0480020501.01.T01:intron	20.0%
!!	TTACCTCTAATAATATACAT+TGG	-	Chr4:42520404-42520423	None:intergenic	20.0%
!!!	AATTATGTAACAACCTTTTT+TGG	-	Chr4:42516938-42516957	None:intergenic	20.0%
!!!	ACATACTATATGACATTTTT+TGG	-	Chr4:42520069-42520088	None:intergenic	20.0%
!!!	AGTTTACAACTATTTTGTTA+AGG	-	Chr4:42517627-42517646	None:intergenic	20.0%
!!!	ATATTTTTTTGACCAAAACA+AGG	-	Chr4:42519288-42519307	None:intergenic	20.0%
!!!	ATTATGTAACAACCTTTTTT+GGG	-	Chr4:42516937-42516956	None:intergenic	20.0%
!!!	GATATAGCTTTAATCAATAA+GGG	-	Chr4:42516285-42516304	None:intergenic	20.0%
!!!	GCTACTATTGATTTAATAAT+AGG	+	Chr4:42516239-42516258	MsG0480020501.01.T01:CDS	20.0%
!!!	GTTTACAACTATTTTGTTAA+GGG	-	Chr4:42517626-42517645	None:intergenic	20.0%
!!!	TATTTTTTTGACCAAAACAA+GGG	-	Chr4:42519287-42519306	None:intergenic	20.0%
!!!	TGATATAGCTTTAATCAATA+AGG	-	Chr4:42516286-42516305	None:intergenic	20.0%
!!!	TTCTTTTTCATGAATATTTG+AGG	-	Chr4:42519180-42519199	None:intergenic	20.0%
!!!	TTTCATTTTTTATTTGGATC+TGG	+	Chr4:42517569-42517588	MsG0480020501.01.T01:intron	20.0%
!	AAAAAGAAGTCAAAGAAGTA+CGG	+	Chr4:42519192-42519211	MsG0480020501.01.T01:intron	25.0%
!	AAAAGTCTATTTAAGTCCAA+TGG	+	Chr4:42520128-42520147	MsG0480020501.01.T01:intron	25.0%
!	AAACCATTATGATAAGACAT+AGG	-	Chr4:42518181-42518200	None:intergenic	25.0%
!	AAATGTAAAGTTTACCTGTA+CGG	-	Chr4:42518031-42518050	None:intergenic	25.0%
!	AACATCTTGTGTAAAAAAAC+AGG	+	Chr4:42518644-42518663	MsG0480020501.01.T01:intron	25.0%
!	AAGTTTGTAGATATTCTACA+TGG	+	Chr4:42520308-42520327	MsG0480020501.01.T01:three_prime_UTR	25.0%
!	AATATGATTAAAGTCGAATG+GGG	+	Chr4:42518553-42518572	MsG0480020501.01.T01:intron	25.0%
!	ACATCTTGTGTAAAAAAACA+GGG	+	Chr4:42518645-42518664	MsG0480020501.01.T01:intron	25.0%
!	ATCATAGATACTAACAGTAA+TGG	+	Chr4:42517457-42517476	MsG0480020501.01.T01:CDS	25.0%
!	ATTATACTTAATCATTGGCA+TGG	+	Chr4:42517033-42517052	MsG0480020501.01.T01:intron	25.0%
!	CAAGAACTTGTGATTTAATA+TGG	+	Chr4:42517196-42517215	MsG0480020501.01.T01:intron	25.0%
!	CAATAAATATAGAAACTACC+AGG	-	Chr4:42516964-42516983	None:intergenic	25.0%
!	CATCCAATGTATATTATTAG+AGG	+	Chr4:42520398-42520417	MsG0480020501.01.T01:three_prime_UTR	25.0%
!	CTTAAATAAGTGTACAACAA+CGG	-	Chr4:42520334-42520353	None:intergenic	25.0%
!	GAGGTAACTGAATATAAATA+TGG	+	Chr4:42520417-42520436	MsG0480020501.01.T01:three_prime_UTR	25.0%
!	TATAGAGACAATAAAGACTT+AGG	+	Chr4:42519895-42519914	MsG0480020501.01.T01:CDS	25.0%
!	TATCATAGTATCATACAGAT+TGG	-	Chr4:42517797-42517816	None:intergenic	25.0%
!	TCTAGTTAAATTCAACAAGA+CGG	-	Chr4:42518394-42518413	None:intergenic	25.0%
!	TTATATGCAAATGTTAACAG+TGG	-	Chr4:42520235-42520254	None:intergenic	25.0%
!	TTGAAGGATAGAGAATTAAA+CGG	+	Chr4:42517162-42517181	MsG0480020501.01.T01:intron	25.0%
!!	AAATGTTTCTAATGATCTCA+TGG	+	Chr4:42518756-42518775	MsG0480020501.01.T01:intron	25.0%
!!	AATTTCCAGAAGAATTTTGA+AGG	+	Chr4:42519923-42519942	MsG0480020501.01.T01:CDS	25.0%
!!	ACTATTTTGTTAAGGGATAA+TGG	-	Chr4:42517619-42517638	None:intergenic	25.0%
!!	CATTAGAAACATTTGACTTA+GGG	-	Chr4:42518750-42518769	None:intergenic	25.0%
!!	TCATTAGAAACATTTGACTT+AGG	-	Chr4:42518751-42518770	None:intergenic	25.0%
!!	TGTTCTTTATTTGCTAAAGT+CGG	+	Chr4:42517834-42517853	MsG0480020501.01.T01:intron	25.0%
!!	TTTATGCCTACAAATTTGTT+GGG	+	Chr4:42516881-42516900	MsG0480020501.01.T01:intron	25.0%
!!!	AAATCCATAATTTTAGTGAG+TGG	+	Chr4:42517111-42517130	MsG0480020501.01.T01:intron	25.0%
!!!	ATGTAGTACTGGTTTAAAAT+AGG	-	Chr4:42518925-42518944	None:intergenic	25.0%
!!!	CGCATTATACTATTTTAATC+AGG	+	Chr4:42518974-42518993	MsG0480020501.01.T01:intron	25.0%
!!!	TAATTTTTTTAGGTGCTCAA+AGG	-	Chr4:42517017-42517036	None:intergenic	25.0%
!!!	TATATGACATTTTTTGGTAC+AGG	-	Chr4:42520063-42520082	None:intergenic	25.0%
!!!	TGTAGTACTGGTTTAAAATA+GGG	-	Chr4:42518924-42518943	None:intergenic	25.0%
!!!	TTCAAGTTTGTCTTTTTTCT+TGG	+	Chr4:42517680-42517699	MsG0480020501.01.T01:intron	25.0%
	ACAATTCTGCACCAATAAAT+AGG	+	Chr4:42517524-42517543	MsG0480020501.01.T01:CDS	30.0%
	ACACTCCTCTGATTAAAATT+AGG	-	Chr4:42516751-42516770	None:intergenic	30.0%
	ATAAAGCAAATGTTAATGCG+AGG	-	Chr4:42516866-42516885	None:intergenic	30.0%
	ATAGATACTAACAGTAATGG+CGG	+	Chr4:42517460-42517479	MsG0480020501.01.T01:CDS	30.0%
	ATATGATTAAAGTCGAATGG+GGG	+	Chr4:42518554-42518573	MsG0480020501.01.T01:intron	30.0%
	ATTCTTTCGAGAAAACAATC+AGG	+	Chr4:42519348-42519367	MsG0480020501.01.T01:CDS	30.0%
	CGTTGTTGTACACTTATTTA+AGG	+	Chr4:42520332-42520351	MsG0480020501.01.T01:three_prime_UTR	30.0%
	CTACTATAAGTTATGCGATT+GGG	+	Chr4:42518332-42518351	MsG0480020501.01.T01:CDS	30.0%
	CTTTATGCCTACAAATTTGT+TGG	+	Chr4:42516880-42516899	MsG0480020501.01.T01:intron	30.0%
	TACAAATGATAGTTCGTGAT+CGG	-	Chr4:42518520-42518539	None:intergenic	30.0%
	TACACCACTCACTAAAATTA+TGG	-	Chr4:42517118-42517137	None:intergenic	30.0%
	TACTATAAGTTATGCGATTG+GGG	+	Chr4:42518333-42518352	MsG0480020501.01.T01:CDS	30.0%
	TATGTCGAACCAAAAAAACA+CGG	-	Chr4:42520360-42520379	None:intergenic	30.0%
	TCAAAGGATAGAAATAATGG+CGG	-	Chr4:42517001-42517020	None:intergenic	30.0%
	TGACAAGACTAGAAAAACAA+AGG	-	Chr4:42518059-42518078	None:intergenic	30.0%
	TGCTCAAAGGATAGAAATAA+TGG	-	Chr4:42517004-42517023	None:intergenic	30.0%
	TGTCATAGCCAATTTATGAA+AGG	+	Chr4:42516387-42516406	MsG0480020501.01.T01:intron	30.0%
	TTATAGTAGCCTGAAAAGAT+GGG	-	Chr4:42518321-42518340	None:intergenic	30.0%
	TTCCAATATTTGAGGATGTA+GGG	-	Chr4:42519999-42520018	None:intergenic	30.0%
	TTCTTTCGAGAAAACAATCA+GGG	+	Chr4:42519349-42519368	MsG0480020501.01.T01:CDS	30.0%
	TTGCAATAACAAACCTGAAA+AGG	-	Chr4:42518360-42518379	None:intergenic	30.0%
	TTGCCTATGTCTTATCATAA+TGG	+	Chr4:42518175-42518194	MsG0480020501.01.T01:intron	30.0%
	TTGTGATTTAATATGGCGAA+TGG	+	Chr4:42517203-42517222	MsG0480020501.01.T01:intron	30.0%
	TTGTGTAAAAAAACAGGGTA+AGG	+	Chr4:42518650-42518669	MsG0480020501.01.T01:intron	30.0%
	TTTCCAATATTTGAGGATGT+AGG	-	Chr4:42520000-42520019	None:intergenic	30.0%
!	AAAGTTCTAACTCATACCAT+TGG	-	Chr4:42520147-42520166	None:intergenic	30.0%
!	ACACATGTATGATGTTTCTA+TGG	-	Chr4:42519487-42519506	None:intergenic	30.0%
!	ATCCTATGTTTTCATGTCAT+TGG	+	Chr4:42517057-42517076	MsG0480020501.01.T01:intron	30.0%
!	CCAACCATTTAAAATTCACT+AGG	-	Chr4:42518897-42518916	None:intergenic	30.0%
!	CCTAGTGAATTTTAAATGGT+TGG	+	Chr4:42518894-42518913	MsG0480020501.01.T01:intron	30.0%
!	GAAGCCTAGTGAATTTTAAA+TGG	+	Chr4:42518890-42518909	MsG0480020501.01.T01:intron	30.0%
!	GAATTGAAAGGTGTAACAAT+TGG	-	Chr4:42516126-42516145	None:intergenic	30.0%
!	GTATTTTATCAACGACTTGT+TGG	+	Chr4:42519448-42519467	MsG0480020501.01.T01:CDS	30.0%
!	TCAATCTTCGTTGCTTATTT+TGG	+	Chr4:42519066-42519085	MsG0480020501.01.T01:intron	30.0%
!	TGTCTTGCAAACATTTTTGA+AGG	+	Chr4:42517146-42517165	MsG0480020501.01.T01:intron	30.0%
!	TTTTCTCGAAAGAATCACTA+AGG	-	Chr4:42519343-42519362	None:intergenic	30.0%
!!	AAGCTCCTAATTTTAATCAG+AGG	+	Chr4:42516743-42516762	MsG0480020501.01.T01:intron	30.0%
!!	ATTTTAATGCCCATCTTTTC+AGG	+	Chr4:42518309-42518328	MsG0480020501.01.T01:intron	30.0%
!!	TTACACAAGATGTTGTTTCT+AGG	-	Chr4:42518638-42518657	None:intergenic	30.0%
!!!	AACGATCCACATTTTAAGTT+TGG	+	Chr4:42519612-42519631	MsG0480020501.01.T01:intron	30.0%
	AAATAGGAAGATGACTGCAA+AGG	+	Chr4:42517540-42517559	MsG0480020501.01.T01:CDS	35.0%
	AGAATTACTACTTCTCTCTG+TGG	+	Chr4:42517963-42517982	MsG0480020501.01.T01:CDS	35.0%
	ATCATGATAATTGCTCTCTG+TGG	+	Chr4:42519016-42519035	MsG0480020501.01.T01:intron	35.0%
	ATGTAAGTAGTGCTTAGTTC+CGG	-	Chr4:42520036-42520055	None:intergenic	35.0%
	ATGTTGTTAAATGGATGCCA+TGG	+	Chr4:42516323-42516342	MsG0480020501.01.T01:intron	35.0%
	ATTTGCAACTTACACCATGA+TGG	-	Chr4:42518212-42518231	None:intergenic	35.0%
	ATTTGGCTATTGTCACAATG+TGG	+	Chr4:42516460-42516479	MsG0480020501.01.T01:intron	35.0%
	CAAAAACCTCACTTTCTTGA+GGG	+	Chr4:42519516-42519535	MsG0480020501.01.T01:intron	35.0%
	CTGGTCATTTCCAATATTTG+AGG	-	Chr4:42520007-42520026	None:intergenic	35.0%
	CTTATAGTAGCCTGAAAAGA+TGG	-	Chr4:42518322-42518341	None:intergenic	35.0%
	GAATTACTACTTCTCTCTGT+GGG	+	Chr4:42517964-42517983	MsG0480020501.01.T01:CDS	35.0%
	GCAGGAATCCTTTCATAAAT+TGG	-	Chr4:42516398-42516417	None:intergenic	35.0%
	GCAGTCATCTTCCTATTTAT+TGG	-	Chr4:42517538-42517557	None:intergenic	35.0%
	GCTACTATAAGTTATGCGAT+TGG	+	Chr4:42518331-42518350	MsG0480020501.01.T01:CDS	35.0%
	GCTTTAATCAATAAGGGCAA+GGG	-	Chr4:42516279-42516298	None:intergenic	35.0%
	GGTTGTTACATAATTCAACC+TGG	+	Chr4:42516943-42516962	MsG0480020501.01.T01:intron	35.0%
	TATGATTAAAGTCGAATGGG+GGG	+	Chr4:42518555-42518574	MsG0480020501.01.T01:intron	35.0%
	TATTTGAGGAACAGTTTCAC+TGG	-	Chr4:42519166-42519185	None:intergenic	35.0%
	TCAAAAACCTCACTTTCTTG+AGG	+	Chr4:42519515-42519534	MsG0480020501.01.T01:intron	35.0%
	TCAACTATCGTTTAACACGT+TGG	+	Chr4:42519784-42519803	MsG0480020501.01.T01:intron	35.0%
	TCATGATAATTGCTCTCTGT+GGG	+	Chr4:42519017-42519036	MsG0480020501.01.T01:intron	35.0%
	TCTTTCGAGAAAACAATCAG+GGG	+	Chr4:42519350-42519369	MsG0480020501.01.T01:CDS	35.0%
	TGCCAATGACATGAAAACAT+AGG	-	Chr4:42517062-42517081	None:intergenic	35.0%
	TGTATGTAGAAAAAGCGGTT+GGG	-	Chr4:42516175-42516194	None:intergenic	35.0%
	TTAAACCAGTACTACATGTG+TGG	+	Chr4:42518928-42518947	MsG0480020501.01.T01:intron	35.0%
	TTAATCCACACATGTAGTAC+TGG	-	Chr4:42518936-42518955	None:intergenic	35.0%
	TTATGTTAAAAAAGGGCCTC+TGG	+	Chr4:42516709-42516728	MsG0480020501.01.T01:intron	35.0%
	TTCCCTACATCCTCAAATAT+TGG	+	Chr4:42519994-42520013	MsG0480020501.01.T01:three_prime_UTR	35.0%
	TTGGGAAAGGAGAAAATGAA+GGG	-	Chr4:42516157-42516176	None:intergenic	35.0%
!	AAAAACAAGGCTTTTGCATG+AGG	+	Chr4:42516550-42516569	MsG0480020501.01.T01:intron	35.0%
!	AGCTTTAATCAATAAGGGCA+AGG	-	Chr4:42516280-42516299	None:intergenic	35.0%
!	AGTAAAGCGCTTTCAAGAAA+GGG	-	Chr4:42519762-42519781	None:intergenic	35.0%
!	CGAATGGATTTCAGAAATTC+TGG	+	Chr4:42517219-42517238	MsG0480020501.01.T01:intron	35.0%
!	TAGTAAAGCGCTTTCAAGAA+AGG	-	Chr4:42519763-42519782	None:intergenic	35.0%
!	TGGTTTAACTTTCACCATCA+TGG	+	Chr4:42518195-42518214	MsG0480020501.01.T01:intron	35.0%
!	TGTGTTTGGTTTCTTTGATC+AGG	+	Chr4:42517397-42517416	MsG0480020501.01.T01:intron	35.0%
!!	AGTATTGAGCGTGTAAGTTT+TGG	+	Chr4:42517338-42517357	MsG0480020501.01.T01:intron	35.0%
!!!	AATGGTATGGCGGATTTTTT+TGG	+	Chr4:42516360-42516379	MsG0480020501.01.T01:intron	35.0%
!!!	CATGCAAAAGCCTTGTTTTT+GGG	-	Chr4:42516550-42516569	None:intergenic	35.0%
!!!	CTTGATAGTTTTTTCCGTAC+AGG	+	Chr4:42518014-42518033	MsG0480020501.01.T01:intron	35.0%
!!!	TCATGCAAAAGCCTTGTTTT+TGG	-	Chr4:42516551-42516570	None:intergenic	35.0%
!!!	TTTAAGGCACCGTGTTTTTT+TGG	+	Chr4:42520348-42520367	MsG0480020501.01.T01:three_prime_UTR	35.0%
	AAAGTCCATAAATTGCTGCC+GGG	-	Chr4:42519412-42519431	None:intergenic	40.0%
	AAAGTGTGTTCTGCTGAACA+TGG	-	Chr4:42519975-42519994	None:intergenic	40.0%
	ACCTTTGAGCTAGTAAAGCA+AGG	+	Chr4:42516627-42516646	MsG0480020501.01.T01:intron	40.0%
	AGAACATACTGAGTCAAGAG+AGG	-	Chr4:42517820-42517839	None:intergenic	40.0%
	AGCAAAACATACATGCCTTG+AGG	-	Chr4:42517869-42517888	None:intergenic	40.0%
	AGCTCTTAGTGATGAAACAG+AGG	-	Chr4:42516201-42516220	None:intergenic	40.0%
	AGTACCCAAGAGTGGTTATT+AGG	+	Chr4:42517499-42517518	MsG0480020501.01.T01:CDS	40.0%
	ATCGTTCGATCTTGATCCAA+CGG	-	Chr4:42519598-42519617	None:intergenic	40.0%
	ATGTCTTTGTAGCATGCATG+TGG	+	Chr4:42520258-42520277	MsG0480020501.01.T01:intron	40.0%
	CAAAGTCCATAAATTGCTGC+CGG	-	Chr4:42519413-42519432	None:intergenic	40.0%
	CAATCCAAAGAAACTGAACG+CGG	+	Chr4:42517764-42517783	MsG0480020501.01.T01:intron	40.0%
	CAATGCCCAACAAATAGAAC+AGG	+	Chr4:42517275-42517294	MsG0480020501.01.T01:CDS	40.0%
	CATGTTGATACAAGAGCTGA+AGG	-	Chr4:42519131-42519150	None:intergenic	40.0%
	CCACTCTTCAAACCCAAAAA+AGG	+	Chr4:42516922-42516941	MsG0480020501.01.T01:intron	40.0%
	CCTTTGAGCTAGTAAAGCAA+GGG	+	Chr4:42516628-42516647	MsG0480020501.01.T01:intron	40.0%
	CGTACAATACACCAATCGAT+GGG	+	Chr4:42518676-42518695	MsG0480020501.01.T01:intron	40.0%
	CTAAATCCCTCAAGAAAGTG+AGG	-	Chr4:42519525-42519544	None:intergenic	40.0%
	CTCAGCCTTCAAAATTCTTC+TGG	-	Chr4:42519931-42519950	None:intergenic	40.0%
	CTCTTAGTGATGAAACAGAG+GGG	-	Chr4:42516199-42516218	None:intergenic	40.0%
	GCAATAGCGTGTTTATATGG+CGG	+	Chr4:42516437-42516456	MsG0480020501.01.T01:intron	40.0%
	GCAGCAATAGCGTGTTTATA+TGG	+	Chr4:42516434-42516453	MsG0480020501.01.T01:intron	40.0%
	GCTCTTAGTGATGAAACAGA+GGG	-	Chr4:42516200-42516219	None:intergenic	40.0%
	GGCAGCAATTTATGGACTTT+GGG	+	Chr4:42519412-42519431	MsG0480020501.01.T01:CDS	40.0%
	GTAGACAAACATCCCAAACA+TGG	-	Chr4:42519851-42519870	None:intergenic	40.0%
	GTATAGCACTTTCATCTCCA+AGG	+	Chr4:42519378-42519397	MsG0480020501.01.T01:CDS	40.0%
	GTCACCTAATAACCACTCTT+GGG	-	Chr4:42517506-42517525	None:intergenic	40.0%
	GTGTATGTAGAAAAAGCGGT+TGG	-	Chr4:42516176-42516195	None:intergenic	40.0%
	GTTAACAACAGAACGCTAAC+TGG	-	Chr4:42519254-42519273	None:intergenic	40.0%
	GTTGGGAAAGGAGAAAATGA+AGG	-	Chr4:42516158-42516177	None:intergenic	40.0%
	GTTGGTCGTTGGATCAAAAT+CGG	-	Chr4:42519688-42519707	None:intergenic	40.0%
	TACTAGCTCAAAGGTTGGAT+CGG	-	Chr4:42516622-42516641	None:intergenic	40.0%
	TAGCACACAATAGCATTGCA+GGG	+	Chr4:42516596-42516615	MsG0480020501.01.T01:intron	40.0%
	TCGCACCTGTTCTATTTGTT+GGG	-	Chr4:42517283-42517302	None:intergenic	40.0%
	TCTCTTTGACCGAGTAATCA+AGG	+	Chr4:42516491-42516510	MsG0480020501.01.T01:intron	40.0%
	TCTTAGTGATGAAACAGAGG+GGG	-	Chr4:42516198-42516217	None:intergenic	40.0%
	TGCTTTACTAGCTCAAAGGT+TGG	-	Chr4:42516627-42516646	None:intergenic	40.0%
	TGGGAAAGGAGAAAATGAAG+GGG	-	Chr4:42516156-42516175	None:intergenic	40.0%
	TGTCACCTAATAACCACTCT+TGG	-	Chr4:42517507-42517526	None:intergenic	40.0%
	TTAGCACACAATAGCATTGC+AGG	+	Chr4:42516595-42516614	MsG0480020501.01.T01:intron	40.0%
	TTATGAAAGGATTCCTGCCA+TGG	+	Chr4:42516400-42516419	MsG0480020501.01.T01:intron	40.0%
	TTATGCAGTCAGAACATCGT+TGG	-	Chr4:42519706-42519725	None:intergenic	40.0%
	TTCGCACCTGTTCTATTTGT+TGG	-	Chr4:42517284-42517303	None:intergenic	40.0%
	TTTAGTGAGTGGTGTAGATG+AGG	+	Chr4:42517122-42517141	MsG0480020501.01.T01:intron	40.0%
!	AACTTTCAAGTACCCAAGAG+TGG	+	Chr4:42517491-42517510	MsG0480020501.01.T01:CDS	40.0%
!	AGCTTTAACCATTAGACCAG+AGG	-	Chr4:42516728-42516747	None:intergenic	40.0%
!	AGGAGAAAATGAAGGGGTTT+TGG	-	Chr4:42516150-42516169	None:intergenic	40.0%
!	GAGAAAATGAAGGGGTTTTG+GGG	-	Chr4:42516148-42516167	None:intergenic	40.0%
!	GGAGAAAATGAAGGGGTTTT+GGG	-	Chr4:42516149-42516168	None:intergenic	40.0%
!	TGTTTCTGCTGAGAGCTAAT+TGG	+	Chr4:42517085-42517104	MsG0480020501.01.T01:intron	40.0%
!!	AAGAATTTTGAAGGCTGAGG+TGG	+	Chr4:42519932-42519951	MsG0480020501.01.T01:exon	40.0%
!!	CAGAAGAATTTTGAAGGCTG+AGG	+	Chr4:42519929-42519948	MsG0480020501.01.T01:exon	40.0%
!!	CATTCGCTTATCCCTTGTTT+TGG	+	Chr4:42519273-42519292	MsG0480020501.01.T01:CDS	40.0%
!!!	CAACGACTTGTTGGATTTTC+AGG	+	Chr4:42519457-42519476	MsG0480020501.01.T01:CDS	40.0%
!!!	CCTTTTTTGGGTTTGAAGAG+TGG	-	Chr4:42516925-42516944	None:intergenic	40.0%
	AAAAAGGGCCTCTGGTCTAA+TGG	+	Chr4:42516717-42516736	MsG0480020501.01.T01:intron	45.0%
	AAACACGCTATTGCTGCCTA+TGG	-	Chr4:42516431-42516450	None:intergenic	45.0%
	AATCAAGGTAGCTGAGCATG+AGG	+	Chr4:42516506-42516525	MsG0480020501.01.T01:intron	45.0%
	ACAAACATCCCAAACATGGC+TGG	-	Chr4:42519847-42519866	None:intergenic	45.0%
	AGTCGGTAACACTTACCTCA+AGG	+	Chr4:42517851-42517870	MsG0480020501.01.T01:intron	45.0%
	AGTGTTAGCAACACACTCTG+TGG	+	Chr4:42516766-42516785	MsG0480020501.01.T01:intron	45.0%
	CAAGGTCGTGACTGCATTAA+TGG	-	Chr4:42519571-42519590	None:intergenic	45.0%
	CACCTCAAGTCCCAAAAACA+AGG	+	Chr4:42516537-42516556	MsG0480020501.01.T01:intron	45.0%
	CATTAATGCAGTCACGACCT+TGG	+	Chr4:42519569-42519588	MsG0480020501.01.T01:intron	45.0%
	CCAAACACAGAATTCGCAAC+TGG	-	Chr4:42517386-42517405	None:intergenic	45.0%
	CCAGTTGCGAATTCTGTGTT+TGG	+	Chr4:42517383-42517402	MsG0480020501.01.T01:intron	45.0%
	CCCTTGCTTTACTAGCTCAA+AGG	-	Chr4:42516631-42516650	None:intergenic	45.0%
	CGGCAGCAATTTATGGACTT+TGG	+	Chr4:42519411-42519430	MsG0480020501.01.T01:CDS	45.0%
	CTACTTCTCTCTGTGGGTAT+TGG	+	Chr4:42517970-42517989	MsG0480020501.01.T01:intron	45.0%
	GAGAAAACAATCAGGGGTAG+TGG	+	Chr4:42519356-42519375	MsG0480020501.01.T01:CDS	45.0%
	GCGCTTTCAAGAAAGGGATT+TGG	-	Chr4:42519756-42519775	None:intergenic	45.0%
	GCGTACAATACACCAATCGA+TGG	+	Chr4:42518675-42518694	MsG0480020501.01.T01:intron	45.0%
	GCTCAGCTACCTTGATTACT+CGG	-	Chr4:42516503-42516522	None:intergenic	45.0%
	GGAAGATGACTGCAAAGGTA+TGG	+	Chr4:42517545-42517564	MsG0480020501.01.T01:CDS	45.0%
	GTAGAAAAAGCGGTTGGGAA+AGG	-	Chr4:42516170-42516189	None:intergenic	45.0%
	GTGTTAGCAACACACTCTGT+GGG	+	Chr4:42516767-42516786	MsG0480020501.01.T01:intron	45.0%
	GTTGTTGTCACGTGACTGAA+AGG	+	Chr4:42518598-42518617	MsG0480020501.01.T01:intron	45.0%
	TTCGCAACTGGATTCGTACA+AGG	-	Chr4:42517374-42517393	None:intergenic	45.0%
	TTGACCGCGTTCAGTTTCTT+TGG	-	Chr4:42517771-42517790	None:intergenic	45.0%
!	AACAAGGCTTTTGCATGAGG+TGG	+	Chr4:42516553-42516572	MsG0480020501.01.T01:intron	45.0%
!	GGGGGTGTATGTAGAAAAAG+CGG	-	Chr4:42516180-42516199	None:intergenic	45.0%
!	GGTATTGGATTGGGTTGTAG+CGG	+	Chr4:42517985-42518004	MsG0480020501.01.T01:intron	45.0%
!!	CTCTCTGTGGGTATTGGATT+GGG	+	Chr4:42517976-42517995	MsG0480020501.01.T01:intron	45.0%
!!	GCGTGTTTATATGGCGGATT+TGG	+	Chr4:42516443-42516462	MsG0480020501.01.T01:intron	45.0%
!!	TCTCTCTGTGGGTATTGGAT+TGG	+	Chr4:42517975-42517994	MsG0480020501.01.T01:intron	45.0%
!!	TGCCTACAAATTTGTTGGGC+CGG	+	Chr4:42516885-42516904	MsG0480020501.01.T01:intron	45.0%
!!!	AGCCTTGTTTTTGGGACTTG+AGG	-	Chr4:42516542-42516561	None:intergenic	45.0%
!!!	AGGGGTTTTGGGGAATTGAA+AGG	-	Chr4:42516138-42516157	None:intergenic	45.0%
!!!	TGTTTTTGGGACTTGAGGTG+AGG	-	Chr4:42516537-42516556	None:intergenic	45.0%
	ACTAAAGCTCCTGCATACGC+AGG	-	Chr4:42518716-42518735	None:intergenic	50.0%
	AGCTTGTGCCAGCCATGTTT+GGG	+	Chr4:42519836-42519855	MsG0480020501.01.T01:intron	50.0%
	ATCTCCAAGGCTTGTGATCC+CGG	+	Chr4:42519391-42519410	MsG0480020501.01.T01:CDS	50.0%
	CACCGGCCCAACAAATTTGT+AGG	-	Chr4:42516890-42516909	None:intergenic	50.0%
	CTAAAGCTCCTGCATACGCA+GGG	-	Chr4:42518715-42518734	None:intergenic	50.0%
	GTCAGAACATCGTTGGTCGT+TGG	-	Chr4:42519699-42519718	None:intergenic	50.0%
	GTGATCCCGGCAGCAATTTA+TGG	+	Chr4:42519404-42519423	MsG0480020501.01.T01:CDS	50.0%
	TCACGTGACTGAAAGGTCAC+AGG	+	Chr4:42518605-42518624	MsG0480020501.01.T01:intron	50.0%
	TCTTGATCCAACGGCTACCA+AGG	-	Chr4:42519589-42519608	None:intergenic	50.0%
	TGAAAGGATTCCTGCCATGG+TGG	+	Chr4:42516403-42516422	MsG0480020501.01.T01:intron	50.0%
	TGGAAATGACCAGCTGCATC+CGG	+	Chr4:42520014-42520033	MsG0480020501.01.T01:three_prime_UTR	50.0%
!	ACATTTGACTTAGGGCAGCC+CGG	-	Chr4:42518742-42518761	None:intergenic	50.0%
!	ATGCAGGAGCTTTAGTGCAC+CGG	+	Chr4:42518720-42518739	MsG0480020501.01.T01:intron	50.0%
!	ATGCGATTGGGGTCCTTTTC+AGG	+	Chr4:42518344-42518363	MsG0480020501.01.T01:CDS	50.0%
	AACATGGCTGGCACAAGCTG+AGG	-	Chr4:42519835-42519854	None:intergenic	55.0%
	ACATGGCTGGCACAAGCTGA+GGG	-	Chr4:42519834-42519853	None:intergenic	55.0%
	ACCGCCAAGGTGGAATGGTA+TGG	+	Chr4:42516347-42516366	MsG0480020501.01.T01:intron	55.0%
	CAGCTTGTGCCAGCCATGTT+TGG	+	Chr4:42519835-42519854	MsG0480020501.01.T01:intron	55.0%
	GCCAAGGTGGAATGGTATGG+CGG	+	Chr4:42516350-42516369	MsG0480020501.01.T01:intron	55.0%
	GCCATACCATTCCACCTTGG+CGG	-	Chr4:42516351-42516370	None:intergenic	55.0%
	TCCGCCATACCATTCCACCT+TGG	-	Chr4:42516354-42516373	None:intergenic	55.0%
	TGCTTAGTTCCGGATGCAGC+TGG	-	Chr4:42520026-42520045	None:intergenic	55.0%
	TGGGAAGGGATCCCATCGAT+TGG	-	Chr4:42518690-42518709	None:intergenic	55.0%
!	TGCAGGAGCTTTAGTGCACC+GGG	+	Chr4:42518721-42518740	MsG0480020501.01.T01:intron	55.0%
!!	CAAATTTGTTGGGCCGGTGC+TGG	+	Chr4:42516891-42516910	MsG0480020501.01.T01:intron	55.0%
	AGTGGACAGTGCTCCAGCAC+CGG	-	Chr4:42516907-42516926	None:intergenic	60.0%
	ATGGCACCGCCAAGGTGGAA+TGG	+	Chr4:42516342-42516361	MsG0480020501.01.T01:intron	60.0%
	CTCCTGCATACGCAGGGTCT+GGG	-	Chr4:42518709-42518728	None:intergenic	60.0%
	GCATACGCAGGGTCTGGGAA+GGG	-	Chr4:42518704-42518723	None:intergenic	60.0%
	TCCTGCCATGGTGGCACCAT+AGG	+	Chr4:42516412-42516431	MsG0480020501.01.T01:intron	60.0%
	TGCATACGCAGGGTCTGGGA+AGG	-	Chr4:42518705-42518724	None:intergenic	60.0%
	TTCCCAGACCCTGCGTATGC+AGG	+	Chr4:42518704-42518723	MsG0480020501.01.T01:intron	60.0%
!	ATTCCACCTTGGCGGTGCCA+TGG	-	Chr4:42516343-42516362	None:intergenic	60.0%
!	GTCACGACCTTGGTAGCCGT+TGG	+	Chr4:42519579-42519598	MsG0480020501.01.T01:intron	60.0%
!!	TGCTGCCTATGGTGCCACCA+TGG	-	Chr4:42516420-42516439	None:intergenic	60.0%
!!	TGGGGGGAGCATTGACGCAA+CGG	+	Chr4:42518571-42518590	MsG0480020501.01.T01:intron	60.0%
	ATGCCATGGCACCGCCAAGG+TGG	+	Chr4:42516337-42516356	MsG0480020501.01.T01:intron	65.0%
	GCTCCTGCATACGCAGGGTC+TGG	-	Chr4:42518710-42518729	None:intergenic	65.0%
	GCTGCCGGGATCACAAGCCT+TGG	-	Chr4:42519398-42519417	None:intergenic	65.0%
	TGGATGCCATGGCACCGCCA+AGG	+	Chr4:42516334-42516353	MsG0480020501.01.T01:intron	65.0%
!!	GCCTATGGTGCCACCATGGC+AGG	-	Chr4:42516416-42516435	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr4	gene	42516101	42520439	42516101	ID=MsG0480020501.01;Name=MsG0480020501.01
Chr4	mRNA	42516101	42520439	42516101	ID=MsG0480020501.01.T01;Parent=MsG0480020501.01;Name=MsG0480020501.01.T01;_AED=0.49;_eAED=0.50;_QI=0\|0.42\|0.37\|1\|0.14\|0\|8\|268\|241
Chr4	exon	42519838	42520074	42519838	ID=MsG0480020501.01.T01:exon:4517;Parent=MsG0480020501.01.T01
Chr4	exon	42520304	42520439	42520304	ID=MsG0480020501.01.T01:exon:4518;Parent=MsG0480020501.01.T01
Chr4	CDS	42516101	42516261	42516101	ID=MsG0480020501.01.T01:cds;Parent=MsG0480020501.01.T01
Chr4	CDS	42517233	42517296	42517233	ID=MsG0480020501.01.T01:cds;Parent=MsG0480020501.01.T01
Chr4	CDS	42517457	42517566	42517457	ID=MsG0480020501.01.T01:cds;Parent=MsG0480020501.01.T01
Chr4	CDS	42517955	42517985	42517955	ID=MsG0480020501.01.T01:cds;Parent=MsG0480020501.01.T01
Chr4	CDS	42518331	42518365	42518331	ID=MsG0480020501.01.T01:cds;Parent=MsG0480020501.01.T01
Chr4	CDS	42519259	42519478	42519259	ID=MsG0480020501.01.T01:cds;Parent=MsG0480020501.01.T01
Chr4	CDS	42519838	42519942	42519838	ID=MsG0480020501.01.T01:cds;Parent=MsG0480020501.01.T01
Chr4	three_prime_UTR	42519943	42520074	42519943	ID=MsG0480020501.01.T01:three_prime_utr;Parent=MsG0480020501.01.T01
Chr4	three_prime_UTR	42520304	42520439	42520304	ID=MsG0480020501.01.T01:three_prime_utr;Parent=MsG0480020501.01.T01
Chr4	mRNA	42516101	42520267	42516101	ID=MsG0480020501.01.T02;Parent=MsG0480020501.01;Name=MsG0480020501.01.T02;_AED=0.49;_eAED=0.51;_QI=0\|0.42\|0.37\|1\|0.14\|0\|8\|170\|241
Chr4	exon	42519838	42519945	42519838	ID=MsG0480020501.01.T02:exon:4519;Parent=MsG0480020501.01.T02
Chr4	exon	42520101	42520267	42520101	ID=MsG0480020501.01.T02:exon:4520;Parent=MsG0480020501.01.T02
Chr4	CDS	42516101	42516261	42516101	ID=MsG0480020501.01.T02:cds;Parent=MsG0480020501.01.T02
Chr4	CDS	42517233	42517296	42517233	ID=MsG0480020501.01.T02:cds;Parent=MsG0480020501.01.T02
Chr4	CDS	42517457	42517566	42517457	ID=MsG0480020501.01.T02:cds;Parent=MsG0480020501.01.T02
Chr4	CDS	42517955	42517985	42517955	ID=MsG0480020501.01.T02:cds;Parent=MsG0480020501.01.T02
Chr4	CDS	42518331	42518365	42518331	ID=MsG0480020501.01.T02:cds;Parent=MsG0480020501.01.T02
Chr4	CDS	42519259	42519478	42519259	ID=MsG0480020501.01.T02:cds;Parent=MsG0480020501.01.T02
Chr4	CDS	42519838	42519942	42519838	ID=MsG0480020501.01.T02:cds;Parent=MsG0480020501.01.T02
Chr4	three_prime_UTR	42519943	42519945	42519943	ID=MsG0480020501.01.T02:three_prime_utr;Parent=MsG0480020501.01.T02
Chr4	three_prime_UTR	42520101	42520267	42520101	ID=MsG0480020501.01.T02:three_prime_utr;Parent=MsG0480020501.01.T02

Gene Sequence

>MsG0480020501.01.T02

ATGGATAGAATTAGATTTGTCTCCAATTGTTACACCTTTCAATTCCCCAAAACCCCTTCATTTTCTCCTTTCCCAACCGCTTTTTCTACATACACCCCCTCTGTTTCATCACTAAGAGCTTCTCGTACTACTACTGCTGCTACTATTGATTTAATAATAGGAAATTCTGGTGATTATGATGTTAGTAAGCTCAATGACGACAACAATGCCCAACAAATAGAACAGATCATAGATACTAACAGTAATGGCGGTTTTTTGAAACTTTCAAGTACCCAAGAGTGGTTATTAGGTGACAATTCTGCACCAATAAATAGGAAGATGACTGCAAAGGTATGCTCAAGAAAGAATTACTACTTCTCTCTGTGGGCTACTATAAGTTATGCGATTGGGGTCCTTTTCAGCGTTCTGTTGTTAACATTCGCTTATCCCTTGTTTTGGTCAAAAAAATATTTTATAAGCAGAATTGGTATAAGAAGTGAAGACCTTAGTGATTCTTTCGAGAAAACAATCAGGGGTAGTGGTATAGCACTTTCATCTCCAAGGCTTGTGATCCCGGCAGCAATTTATGGACTTTGGGCTGTGTCTCATCAGTATTTTATCAACGACTTGTTGGATTTTCAGCTTGTGCCAGCCATGTTTGGGATGTTTGTCTACAAAGCTGCTGCTCTTGTGCAAGTTTATAGAGACAATAAAGACTTAGGCTTTGAATTTCCAGAAGAATTTTGA

>MsG0480020501.01.T01

Protein sequence

>MsG0480020501.01.T02

MDRIRFVSNCYTFQFPKTPSFSPFPTAFSTYTPSVSSLRASRTTTAATIDLIIGNSGDYDVSKLNDDNNAQQIEQIIDTNSNGGFLKLSSTQEWLLGDNSAPINRKMTAKVCSRKNYYFSLWATISYAIGVLFSVLLLTFAYPLFWSKKYFISRIGIRSEDLSDSFEKTIRGSGIALSSPRLVIPAAIYGLWAVSHQYFINDLLDFQLVPAMFGMFVYKAAALVQVYRDNKDLGFEFPEEF*

>MsG0480020501.01.T01