AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380016578.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016578.01.T01 MTR_3g092140 95.946 148 6 0 267 414 215 362 1.06e-93 291
MsG0380016578.01.T01 MTR_3g092140 63.077 65 12 1 362 414 445 509 7.89e-15 76.6
MsG0380016578.01.T01 MTR_4g035750 74.336 113 27 1 120 230 73 185 2.97e-40 142
MsG0380016578.01.T01 MTR_3g449790 43.609 133 73 2 273 403 216 348 4.30e-30 120
MsG0380016578.01.T01 MTR_3g449790 43.609 133 73 2 273 403 222 354 4.85e-30 120
MsG0380016578.01.T01 MTR_7g035055 64.894 94 21 1 115 208 2 83 8.26e-30 111
MsG0380016578.01.T01 MTR_4g012970 53.153 111 35 2 66 174 1 96 4.94e-29 110
MsG0380016578.01.T01 MTR_4g046673 64.211 95 24 1 1 95 46 130 7.71e-28 112
MsG0380016578.01.T01 MTR_1g057430 52.336 107 20 2 1 107 46 121 6.47e-22 91.3
MsG0380016578.01.T01 MTR_8g067970 49.558 113 23 2 117 229 1 79 2.60e-20 85.5
MsG0380016578.01.T01 MTR_3g052160 58.571 70 27 1 123 190 55 124 3.65e-17 78.6
MsG0380016578.01.T01 MTR_2g038070 48.684 76 37 1 117 190 1 76 1.22e-16 75.5
MsG0380016578.01.T01 MTR_6g026760 64.815 54 19 0 111 164 8 61 1.17e-15 71.6
MsG0380016578.01.T01 MTR_8g073390 52.174 69 33 0 1 69 24 92 1.13e-14 69.7
MsG0380016578.01.T01 MTR_3g023190 56.000 50 22 0 9 58 13 62 7.62e-14 66.2
MsG0380016578.01.T01 MTR_4g091710 68.750 48 13 1 1 48 38 83 1.58e-12 65.1
MsG0380016578.01.T01 MTR_7g115010 31.690 142 75 4 287 420 181 308 2.23e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016578.01.T01 AT5G53580 76.056 142 34 0 273 414 222 363 3.30e-73 234
MsG0380016578.01.T01 AT1G06690 42.105 133 75 2 273 403 233 365 2.61e-30 120

Find 118 sgRNAs with CRISPR-Local

Find 471 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACACAAGCAGAGGAAAATT+TGG 0.222359 3:-85335290 MsG0380016578.01.T01:CDS
CATTTATTGTCATGGTCTTC+TGG 0.241993 3:-85337506 MsG0380016578.01.T01:CDS
CCTTGGTCCAGTTGGAAGTT+TGG 0.261270 3:+85337313 None:intergenic
TTTGTATATGACAAAGTCTT+TGG 0.264747 3:-85339619 MsG0380016578.01.T01:CDS
CTAGGACTTGGAATGCTTAC+TGG 0.291744 3:-85337350 MsG0380016578.01.T01:CDS
AAGGTGATGTTTCTCACCTT+GGG 0.302734 3:-85339092 MsG0380016578.01.T01:CDS
TTCGTCGTATGTATCTCTTC+TGG 0.304218 3:+85334937 None:intergenic
ATGAGTAGAGTTGTTGCTTT+AGG 0.307157 3:+85339583 None:intergenic
CAGTCTGCAACTTGAGCTGC+TGG 0.313420 3:+85335047 None:intergenic
CAAGAGTATTTGTGATTCTC+TGG 0.314126 3:-85337399 MsG0380016578.01.T01:CDS
CTATTTAAGCAAATACTTCC+AGG 0.333869 3:-85337174 MsG0380016578.01.T01:CDS
TTTAAAGATACCATGCTCTA+TGG 0.335081 3:-85339414 MsG0380016578.01.T01:CDS
AAGGATTGTCCGGAGATTAA+TGG 0.352980 3:-85339186 MsG0380016578.01.T01:CDS
TGCTTTGATGGTGTGCTGTT+TGG 0.357983 3:-85339121 MsG0380016578.01.T01:CDS
AGAGGAAAATTTGGGTGCTC+TGG 0.361866 3:-85335281 MsG0380016578.01.T01:CDS
ATTGACTTGACTCCAGGAAT+TGG 0.370976 3:+85335313 None:intergenic
TATGTCAGGTTGCAATAAAT+TGG 0.388740 3:-85335357 MsG0380016578.01.T01:intron
TCTCTCAGGGAACTCAATAA+AGG 0.394660 3:+85337144 None:intergenic
TGAGGATGCAGGTGCTTTGA+TGG 0.402078 3:-85339133 MsG0380016578.01.T01:CDS
TTAAACGATTCAAAAGATCT+AGG 0.409050 3:+85339432 None:intergenic
GCACAAGACAATGGCACTCC+TGG 0.412288 3:+85339713 None:intergenic
AGAGGGAATGGTGGAGGTAG+AGG 0.414424 3:-85339279 MsG0380016578.01.T01:CDS
ACTTGAGAGTTGATGAAAAC+GGG 0.422477 3:-85339320 MsG0380016578.01.T01:CDS
AAAGGTACAATTCCAATTCC+TGG 0.430013 3:-85335325 MsG0380016578.01.T01:CDS
CAACAAAATCCTTGATGACT+TGG 0.444620 3:-85339514 MsG0380016578.01.T01:CDS
GAAGGTGATGTTTCTCACCT+TGG 0.448152 3:-85339093 MsG0380016578.01.T01:CDS
TTTGATGGTGTGCTGTTTGG+AGG 0.450333 3:-85339118 MsG0380016578.01.T01:CDS
ATGCTTTAAGTGTAACAAGA+TGG 0.451946 3:-85339220 MsG0380016578.01.T01:CDS
TCTTGTTACTACTCTTTCCT+CGG 0.453055 3:+85339253 None:intergenic
CCGAGATGGTGGACAAGGCC+AGG 0.455274 3:-85339731 MsG0380016578.01.T01:CDS
AAAAGAAGGCACTGTTACCT+TGG 0.455751 3:-85339391 MsG0380016578.01.T01:CDS
ACACAAGCAGAGGAAAATTT+GGG 0.461452 3:-85335289 MsG0380016578.01.T01:CDS
CAACTGAAGTAGCTCGTTTG+AGG 0.463411 3:+85335246 None:intergenic
GCTTATAGTCCTCTAGGACT+TGG 0.463947 3:-85337362 MsG0380016578.01.T01:CDS
AATTGTCTCTGAGGGTTATG+AGG 0.471223 3:-85339151 MsG0380016578.01.T01:CDS
GGCATCGATGTGGGCAAAGA+TGG 0.471649 3:-85339646 MsG0380016578.01.T01:CDS
TGTGTTATTGACTTGACTCC+AGG 0.471797 3:+85335307 None:intergenic
TGATCATCCAACTTAATACT+TGG 0.476065 3:-85334825 MsG0380016578.01.T01:three_prime_UTR
CAACCATTCATTTATTGTCA+TGG 0.477907 3:-85337514 MsG0380016578.01.T01:CDS
AGTCTGCAACTTGAGCTGCT+GGG 0.478090 3:+85335048 None:intergenic
TCAGCATCCAAACTTCCAAC+TGG 0.478271 3:-85337320 MsG0380016578.01.T01:CDS
CCTGGCCTTGTCCACCATCT+CGG 0.479789 3:+85339731 None:intergenic
TGATTGTCCAAGTATTAAGT+TGG 0.483845 3:+85334818 None:intergenic
GGCCATCATGGAGCAACTTA+CGG 0.485669 3:-85339541 MsG0380016578.01.T01:CDS
GCCCACATCGATGCCGCGGT+TGG 0.486979 3:+85339654 None:intergenic
CTCAATAAAGGATCCAGTCC+TGG 0.487530 3:+85337156 None:intergenic
CAGCACAGCAATCGCCTCGC+AGG 0.488464 3:-85335216 MsG0380016578.01.T01:CDS
GGTCTTCTCCGCTCGTGTCA+TGG 0.491964 3:+85339752 None:intergenic
GAGGAAAATTTGGGTGCTCT+GGG 0.495873 3:-85335280 MsG0380016578.01.T01:CDS
CTCAAACGAGCTACTTCAGT+TGG 0.502646 3:-85335245 MsG0380016578.01.T01:CDS
ACCATGCTCTATGGAAAAGA+AGG 0.509616 3:-85339405 MsG0380016578.01.T01:CDS
TAAGCAAATACTTCCAGGAC+TGG 0.510322 3:-85337169 MsG0380016578.01.T01:CDS
GTCTGCAACTTGAGCTGCTG+GGG 0.511216 3:+85335049 None:intergenic
AAAATTTGGGTGCTCTGGGT+TGG 0.513121 3:-85335276 MsG0380016578.01.T01:CDS
GGTGGAGTCAAAGGCCATCA+TGG 0.513488 3:-85339553 MsG0380016578.01.T01:CDS
TCACTTCAAGAAGGATTGTC+CGG 0.521129 3:-85339196 MsG0380016578.01.T01:CDS
GTAATTGCTTATAGTCCTCT+AGG 0.521768 3:-85337368 MsG0380016578.01.T01:CDS
TCCGTACAAATTGTCTCTGA+GGG 0.522500 3:-85339159 MsG0380016578.01.T01:CDS
CTCCGTAAGTTGCTCCATGA+TGG 0.523562 3:+85339539 None:intergenic
GACTTGAGAGTTGATGAAAA+CGG 0.524254 3:-85339321 MsG0380016578.01.T01:CDS
TTTATTTGCAATATCTCTCA+GGG 0.524302 3:+85337131 None:intergenic
GTTTCAAGAGGGAATGGTGG+AGG 0.525170 3:-85339285 MsG0380016578.01.T01:CDS
TAGGACTTGGAATGCTTACT+GGG 0.528436 3:-85337349 MsG0380016578.01.T01:CDS
AGACCATGACAATAAATGAA+TGG 0.529764 3:+85337511 None:intergenic
TGACAAAGTCTTTGGCTCAT+CGG 0.531350 3:-85339611 MsG0380016578.01.T01:CDS
TGCTTTAAGTGTAACAAGAT+GGG 0.534844 3:-85339219 MsG0380016578.01.T01:CDS
TTAAGTTGGATGATCATGAT+TGG 0.535712 3:+85334832 None:intergenic
ATTCAAGATGGTGGAGTCAA+AGG 0.537955 3:-85339562 MsG0380016578.01.T01:CDS
CTTCGACTTAGTCAACTCCT+TGG 0.538723 3:+85339344 None:intergenic
AGTGCCATTGTCTTGTGCCT+CGG 0.545526 3:-85339708 MsG0380016578.01.T01:CDS
CTAAGTGTTTCAAGAGGGAA+TGG 0.551338 3:-85339291 MsG0380016578.01.T01:CDS
AAGAGTATTTGTGATTCTCT+GGG 0.553509 3:-85337398 MsG0380016578.01.T01:CDS
ATACTGACAGCATAATTTCA+AGG 0.555391 3:+85337541 None:intergenic
AACCAACCGCGGCATCGATG+TGG 0.561536 3:-85339656 MsG0380016578.01.T01:CDS
CAATATTCTCCAAGTCATCA+AGG 0.561736 3:+85339505 None:intergenic
TTCCGTACAAATTGTCTCTG+AGG 0.562641 3:-85339160 MsG0380016578.01.T01:CDS
AAACGAGCTACTTCAGTTGG+AGG 0.564890 3:-85335242 MsG0380016578.01.T01:CDS
ACCAACCGCGGCATCGATGT+GGG 0.565348 3:-85339655 MsG0380016578.01.T01:CDS
CATCTCATAACAAGAAAACC+AGG 0.566823 3:-85334992 MsG0380016578.01.T01:three_prime_UTR
ACCCTCAGAGACAATTTGTA+CGG 0.567204 3:+85339158 None:intergenic
TGATGACTTGGAGAATATTG+AGG 0.572676 3:-85339502 MsG0380016578.01.T01:CDS
CATTCCCTCTTGAAACACTT+AGG 0.575055 3:+85339292 None:intergenic
TCAACACACCTTGGTCCAGT+TGG 0.576474 3:+85337305 None:intergenic
GTGTGCTGTTTGGAGGATGA+AGG 0.581495 3:-85339111 MsG0380016578.01.T01:CDS
TCAAGCAGCTTTGAGAACCA+AGG 0.581560 3:-85339361 MsG0380016578.01.T01:CDS
AGCTGCTTGAACTTCTTCCA+AGG 0.588996 3:+85339374 None:intergenic
ACGGAATTACCATTAATCTC+CGG 0.591225 3:+85339177 None:intergenic
TCTGAGGGTTATGAGGATGC+AGG 0.596234 3:-85339144 MsG0380016578.01.T01:CDS
ATAAATTGGTGCATATGCAA+AGG 0.597596 3:-85335343 MsG0380016578.01.T01:CDS
TGACAATAAATGAATGGTTG+TGG 0.597941 3:+85337517 None:intergenic
AAGACGCAAAACCATGTCAC+AGG 0.598290 3:-85337109 MsG0380016578.01.T01:intron
AGGTGATGTTTCTCACCTTG+GGG 0.600647 3:-85339091 MsG0380016578.01.T01:CDS
CAAGTCAATAACACAAGCAG+AGG 0.602257 3:-85335299 MsG0380016578.01.T01:CDS
AATTGTTCAACAATCTACCC+TGG 0.606116 3:+85334974 None:intergenic
CAAGATGGGTCACTTCAAGA+AGG 0.607652 3:-85339205 MsG0380016578.01.T01:CDS
AGCGGAGAAGACCGAGATGG+TGG 0.610447 3:-85339742 MsG0380016578.01.T01:CDS
AATAACAAGACAATGTCTCA+TGG 0.613499 3:-85335022 MsG0380016578.01.T01:three_prime_UTR
ACTCTACTCATTCAAGATGG+TGG 0.613777 3:-85339571 MsG0380016578.01.T01:CDS
GAAGACCGAGATGGTGGACA+AGG 0.613928 3:-85339736 MsG0380016578.01.T01:CDS
CTTTGCCCACATCGATGCCG+CGG 0.625436 3:+85339650 None:intergenic
AGAGTTGATGAAAACGGGGA+AGG 0.627151 3:-85339315 MsG0380016578.01.T01:CDS
CAAGGAGTTGACTAAGTCGA+AGG 0.636367 3:-85339343 MsG0380016578.01.T01:CDS
CTCTCAAAACTTTATCTCCG+AGG 0.638907 3:+85339691 None:intergenic
ACAACTCTACTCATTCAAGA+TGG 0.639379 3:-85339574 MsG0380016578.01.T01:CDS
AGTGTTTCAAGAGGGAATGG+TGG 0.640720 3:-85339288 MsG0380016578.01.T01:CDS
GAAGGCCTAAGTGTTTCAAG+AGG 0.642890 3:-85339297 MsG0380016578.01.T01:CDS
GAATATTGAGGTGAATCTTG+AGG 0.656452 3:-85339490 MsG0380016578.01.T01:CDS
ATCTCCGAGGCACAAGACAA+TGG 0.657170 3:+85339704 None:intergenic
CTTGAGAGTTGATGAAAACG+GGG 0.658656 3:-85339319 MsG0380016578.01.T01:CDS
ATCTCATAACAAGAAAACCA+GGG 0.667677 3:-85334991 MsG0380016578.01.T01:three_prime_UTR
AGTAGCAAAGGAACCAACCG+CGG 0.673142 3:-85339667 MsG0380016578.01.T01:CDS
CCAAACTTCCAACTGGACCA+AGG 0.674362 3:-85337313 MsG0380016578.01.T01:intron
GGTGATGTTTCTCACCTTGG+GGG 0.682299 3:-85339090 MsG0380016578.01.T01:CDS
AAGGCCTAAGTGTTTCAAGA+GGG 0.688739 3:-85339296 MsG0380016578.01.T01:CDS
TACCGTCACCATGACACGAG+CGG 0.694142 3:-85339760 MsG0380016580.01.T01:CDS
ACGAGCGGAGAAGACCGAGA+TGG 0.696246 3:-85339745 MsG0380016578.01.T01:CDS
GTAAGCATTCCAAGTCCTAG+AGG 0.710131 3:+85337353 None:intergenic
GGTGGAGGTAGAGGTAACCG+AGG 0.714904 3:-85339270 MsG0380016578.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATAGATTATTCAATTAA+AGG - Chr3:85338919-85338938 MsG0380016578.01.T01:intron 10.0%
!! TAATTCCAAATTAAATAAAA+TGG + Chr3:85337837-85337856 None:intergenic 10.0%
!!! TTAATCCATTTTATTTAATT+TGG - Chr3:85337829-85337848 MsG0380016578.01.T01:intron 10.0%
!! AAAAAAAAAACAAATACAAG+GGG - Chr3:85338211-85338230 MsG0380016578.01.T01:intron 15.0%
!! GAAAAAAAAAACAAATACAA+GGG - Chr3:85338210-85338229 MsG0380016578.01.T01:intron 15.0%
!!! GTTTCTTTTACTATAAATAT+AGG - Chr3:85336418-85336437 MsG0380016578.01.T01:intron 15.0%
!!! TGTAATAATTTTGACATTTA+AGG - Chr3:85337110-85337129 MsG0380016578.01.T01:CDS 15.0%
!! AGACAATGAATTTATTTGAT+TGG + Chr3:85339183-85339202 None:intergenic 20.0%
!! GACAATGAATTTATTTGATT+GGG + Chr3:85339182-85339201 None:intergenic 20.0%
!! GGAAAAAAAAAACAAATACA+AGG - Chr3:85338209-85338228 MsG0380016578.01.T01:intron 20.0%
!! TATAAAAAAACGAAAGTAGT+AGG + Chr3:85337512-85337531 None:intergenic 20.0%
!! TTATCCAGTTTATCAATTAT+AGG - Chr3:85339416-85339435 MsG0380016578.01.T01:CDS 20.0%
!! TTTATTAACCTTGAAATATC+TGG + Chr3:85339442-85339461 None:intergenic 20.0%
!!! AAATTAAAGTATTATCTTGG+AGG + Chr3:85338741-85338760 None:intergenic 20.0%
!!! AGGAAATTAAAGTATTATCT+TGG + Chr3:85338744-85338763 None:intergenic 20.0%
!!! ATTTTTCAGAAACGTATTTT+TGG - Chr3:85336369-85336388 MsG0380016578.01.T01:intron 20.0%
!!! CAGATTTGTTACAATTTTAT+GGG - Chr3:85336394-85336413 MsG0380016578.01.T01:intron 20.0%
!!! TGATTTGGAATTAATAACAA+AGG + Chr3:85337371-85337390 None:intergenic 20.0%
!!! TTAGCATCAATAACTTTTTT+CGG - Chr3:85337341-85337360 MsG0380016578.01.T01:CDS 20.0%
!!! TTATGCTGAGTTTTTAATAT+TGG + Chr3:85338855-85338874 None:intergenic 20.0%
!!! TTTTTCAGAAACGTATTTTT+GGG - Chr3:85336370-85336389 MsG0380016578.01.T01:intron 20.0%
! ACGACATTAAAAAATGAAGT+GGG + Chr3:85339026-85339045 None:intergenic 25.0%
! ATTGCAATTCACTTTGATAT+TGG - Chr3:85336805-85336824 MsG0380016578.01.T01:intron 25.0%
! CAAGGAAAATATCTACAAAA+TGG + Chr3:85337935-85337954 None:intergenic 25.0%
! CCATAAAATTGTAACAAATC+TGG + Chr3:85336396-85336415 None:intergenic 25.0%
! GTTACAAAAGAGATTTCAAT+GGG + Chr3:85336652-85336671 None:intergenic 25.0%
! GTTATTAATTCCAAATCACA+GGG - Chr3:85337373-85337392 MsG0380016578.01.T01:CDS 25.0%
! TAAAAATGACGATTGCTTTA+GGG + Chr3:85339672-85339691 None:intergenic 25.0%
! TGTTATTAATTCCAAATCAC+AGG - Chr3:85337372-85337391 MsG0380016578.01.T01:CDS 25.0%
! TTAAAAATGACGATTGCTTT+AGG + Chr3:85339673-85339692 None:intergenic 25.0%
! TTAAACGATTCAAAAGATCT+AGG + Chr3:85335146-85335165 None:intergenic 25.0%
! TTATTAATTCCAAATCACAG+GGG - Chr3:85337374-85337393 MsG0380016578.01.T01:CDS 25.0%
! TTGATTAATGTGAAAACTAC+AGG + Chr3:85337992-85338011 None:intergenic 25.0%
! TTTATTTGCAATATCTCTCA+GGG + Chr3:85337447-85337466 None:intergenic 25.0%
! TTTGTATATGACAAAGTCTT+TGG - Chr3:85334956-85334975 MsG0380016578.01.T01:three_prime_UTR 25.0%
!! GAGTTTTTAATATTGGCATT+TGG + Chr3:85338848-85338867 None:intergenic 25.0%
!! GCTTGTTGGTTAATAATATT+TGG + Chr3:85338160-85338179 None:intergenic 25.0%
!! TACCTGGTTGAAAAATATTT+TGG + Chr3:85339390-85339409 None:intergenic 25.0%
!!! ATCCAAAATATTTTTCAACC+AGG - Chr3:85339385-85339404 MsG0380016578.01.T01:CDS 25.0%
!!! CCAGATTTGTTACAATTTTA+TGG - Chr3:85336393-85336412 MsG0380016578.01.T01:intron 25.0%
!!! GTCTTCTTGTTTTTTTGAAA+CGG - Chr3:85338134-85338153 MsG0380016578.01.T01:intron 25.0%
!!! TAAGGCATTTTTTTATCAGT+AGG - Chr3:85337698-85337717 MsG0380016578.01.T01:intron 25.0%
!!! TTTTATTTGCAATATCTCTC+AGG + Chr3:85337448-85337467 None:intergenic 25.0%
AAACAAATACAAGGGGAAAT+CGG - Chr3:85338218-85338237 MsG0380016578.01.T01:intron 30.0%
AAGGGTTTAGAAATCAAACT+AGG - Chr3:85336484-85336503 MsG0380016578.01.T01:intron 30.0%
AAGTTATGTTCTCCAAAAGA+TGG + Chr3:85338069-85338088 None:intergenic 30.0%
AATAACAAGACAATGTCTCA+TGG - Chr3:85339553-85339572 MsG0380016578.01.T01:CDS 30.0%
AATTCGCAACAAAAACGATA+AGG - Chr3:85336886-85336905 MsG0380016578.01.T01:intron 30.0%
ACCTTAATCTCTTCAATCAT+CGG + Chr3:85336067-85336086 None:intergenic 30.0%
AGACCATGACAATAAATGAA+TGG + Chr3:85337067-85337086 None:intergenic 30.0%
AGGGTTTAGAAATCAAACTA+GGG - Chr3:85336485-85336504 MsG0380016578.01.T01:intron 30.0%
AGTTATGTTCTCCAAAAGAT+GGG + Chr3:85338068-85338087 None:intergenic 30.0%
AGTTGTAGTGTACAAAAGAT+TGG + Chr3:85338805-85338824 None:intergenic 30.0%
ATAAATTGGTGCATATGCAA+AGG - Chr3:85339232-85339251 MsG0380016578.01.T01:CDS 30.0%
ATACTGACAGCATAATTTCA+AGG + Chr3:85337037-85337056 None:intergenic 30.0%
ATCTCATAACAAGAAAACCA+GGG - Chr3:85339584-85339603 MsG0380016578.01.T01:CDS 30.0%
ATTATAGGCCAGATATTTCA+AGG - Chr3:85339431-85339450 MsG0380016578.01.T01:CDS 30.0%
CAACCATTCATTTATTGTCA+TGG - Chr3:85337061-85337080 MsG0380016578.01.T01:intron 30.0%
CACGACATTAAAAAATGAAG+TGG + Chr3:85339027-85339046 None:intergenic 30.0%
CGAAAGTAGTAGGTAAAAAT+AGG + Chr3:85337502-85337521 None:intergenic 30.0%
CGTTACAAAAGAGATTTCAA+TGG + Chr3:85336653-85336672 None:intergenic 30.0%
CTAAAATTCCTTGAGTAGTT+TGG - Chr3:85336009-85336028 MsG0380016578.01.T01:intron 30.0%
CTATTTAAGCAAATACTTCC+AGG - Chr3:85337401-85337420 MsG0380016578.01.T01:CDS 30.0%
TAACGTTACTCATCATATAG+TGG - Chr3:85336668-85336687 MsG0380016578.01.T01:intron 30.0%
TCTCAAAATAGTCTGATACA+AGG + Chr3:85336444-85336463 None:intergenic 30.0%
TGAATTTATTTGATTGGGCA+AGG + Chr3:85339177-85339196 None:intergenic 30.0%
TGACAATAAATGAATGGTTG+TGG + Chr3:85337061-85337080 None:intergenic 30.0%
TGATCATCCAACTTAATACT+TGG - Chr3:85339750-85339769 MsG0380016578.01.T01:CDS 30.0%
TTGTGAAAGTGACTCAAAAT+TGG - Chr3:85336192-85336211 MsG0380016578.01.T01:intron 30.0%
TTTAAAGATACCATGCTCTA+TGG - Chr3:85335161-85335180 MsG0380016578.01.T01:intron 30.0%
TTTGACTGTCAATTCATTTG+AGG - Chr3:85337604-85337623 MsG0380016578.01.T01:intron 30.0%
TTTGTATAGAGTTTGTCTCT+TGG - Chr3:85336508-85336527 MsG0380016578.01.T01:intron 30.0%
! AATGTGAAAACTACAGGTTT+TGG + Chr3:85337986-85338005 None:intergenic 30.0%
! AATTTTCTTTGCTAAGCATG+GGG - Chr3:85337136-85337155 MsG0380016578.01.T01:CDS 30.0%
! ATGCTTTAAGTGTAACAAGA+TGG - Chr3:85335355-85335374 MsG0380016578.01.T01:intron 30.0%
! CAAACTACTCAAGGAATTTT+AGG + Chr3:85336011-85336030 None:intergenic 30.0%
! CAATTTTCTTTGCTAAGCAT+GGG - Chr3:85337135-85337154 MsG0380016578.01.T01:CDS 30.0%
! CTTTCAGCAAACATCAATTT+TGG + Chr3:85336228-85336247 None:intergenic 30.0%
! TATGTCAGGTTGCAATAAAT+TGG - Chr3:85339218-85339237 MsG0380016578.01.T01:CDS 30.0%
! TGCTTTAAGTGTAACAAGAT+GGG - Chr3:85335356-85335375 MsG0380016578.01.T01:intron 30.0%
! TGTTTGCTGAAAGTACAAAT+CGG - Chr3:85336235-85336254 MsG0380016578.01.T01:intron 30.0%
! TTAAAGTATTATCTTGGAGG+TGG + Chr3:85338738-85338757 None:intergenic 30.0%
! TTACTCATCATATAGTGGAA+CGG - Chr3:85336673-85336692 MsG0380016578.01.T01:intron 30.0%
!! AACACAGCTTACTTTTGTAA+AGG - Chr3:85339053-85339072 MsG0380016578.01.T01:intron 30.0%
!! AAGAGTATTTGTGATTCTCT+GGG - Chr3:85337177-85337196 MsG0380016578.01.T01:CDS 30.0%
!! ACTATTTTGAGAGAGATAGA+GGG - Chr3:85336452-85336471 MsG0380016578.01.T01:intron 30.0%
!! CACTTTTCTTTGAGTTATTC+TGG + Chr3:85337011-85337030 None:intergenic 30.0%
!! GAATAGTTCTGATGTTGTTA+CGG + Chr3:85339004-85339023 None:intergenic 30.0%
!! TTAAGTTGGATGATCATGAT+TGG + Chr3:85339746-85339765 None:intergenic 30.0%
!! TTGGTTGGTCTTTCTTTAAA+GGG + Chr3:85339089-85339108 None:intergenic 30.0%
!!! TTGTTTTGGGTGGTTTTTTA+GGG + Chr3:85338275-85338294 None:intergenic 30.0%
AAAATAACAGCACGCGAAAT+CGG + Chr3:85336354-85336373 None:intergenic 35.0%
AAATATGTTCCAAGCCTGAA+GGG - Chr3:85337632-85337651 MsG0380016578.01.T01:intron 35.0%
AACAATAGTGCTAGTGAATG+GGG - Chr3:85337877-85337896 MsG0380016578.01.T01:intron 35.0%
AACACAAGCAGAGGAAAATT+TGG - Chr3:85339285-85339304 MsG0380016578.01.T01:CDS 35.0%
AACTGGATAACATGTATACC+TGG + Chr3:85339406-85339425 None:intergenic 35.0%
AAGAATCTGTTTACCCAGTT+CGG + Chr3:85336735-85336754 None:intergenic 35.0%
AATCCTAATAGTGTTTCCCA+AGG + Chr3:85336563-85336582 None:intergenic 35.0%
AATGGGCATCATCACTAATT+TGG - Chr3:85336152-85336171 MsG0380016578.01.T01:intron 35.0%
AATTGTTCAACAATCTACCC+TGG + Chr3:85339604-85339623 None:intergenic 35.0%
ACAACTCTACTCATTCAAGA+TGG - Chr3:85335001-85335020 MsG0380016578.01.T01:three_prime_UTR 35.0%
ACACAAGCAGAGGAAAATTT+GGG - Chr3:85339286-85339305 MsG0380016578.01.T01:CDS 35.0%
ACCAATAACAACTTGATGTG+TGG + Chr3:85336851-85336870 None:intergenic 35.0%
ACGGAATTACCATTAATCTC+CGG + Chr3:85335401-85335420 None:intergenic 35.0%
ACTATTAGGATTGAGTCTCT+TGG - Chr3:85336571-85336590 MsG0380016578.01.T01:intron 35.0%
AGGTTGAAGAATGTATAGCA+CGG - Chr3:85335782-85335801 MsG0380016578.01.T01:intron 35.0%
AGTAGTATATCTTGCATGAG+TGG - Chr3:85337673-85337692 MsG0380016578.01.T01:intron 35.0%
AGTGACTCAAAATTGGAGTT+TGG - Chr3:85336199-85336218 MsG0380016578.01.T01:intron 35.0%
CAAAAAAACAAGAAGACCGA+AGG + Chr3:85338131-85338150 None:intergenic 35.0%
CAAACTACACTAGGAATTTC+AGG + Chr3:85335915-85335934 None:intergenic 35.0%
CAACAATAGTGCTAGTGAAT+GGG - Chr3:85337876-85337895 MsG0380016578.01.T01:intron 35.0%
CAATATTCTCCAAGTCATCA+AGG + Chr3:85335073-85335092 None:intergenic 35.0%
CATCTCATAACAAGAAAACC+AGG - Chr3:85339583-85339602 MsG0380016578.01.T01:CDS 35.0%
CATTTATTGTCATGGTCTTC+TGG - Chr3:85337069-85337088 MsG0380016578.01.T01:intron 35.0%
CTAAAAAACCACCCAAAACA+AGG - Chr3:85338274-85338293 MsG0380016578.01.T01:intron 35.0%
CTGAAATTCCTAGTGTAGTT+TGG - Chr3:85335913-85335932 MsG0380016578.01.T01:intron 35.0%
CTGGCCTATAATTGATAAAC+TGG + Chr3:85339423-85339442 None:intergenic 35.0%
GAAAAAGATTACCTGTGACA+TGG + Chr3:85337480-85337499 None:intergenic 35.0%
GAATATTGAGGTGAATCTTG+AGG - Chr3:85335085-85335104 MsG0380016578.01.T01:intron 35.0%
GAATTACCCTAAAAGTCCAA+GGG - Chr3:85335811-85335830 MsG0380016578.01.T01:intron 35.0%
GAGATTAAGGTGTAAACTTG+TGG - Chr3:85336076-85336095 MsG0380016578.01.T01:intron 35.0%
GTAATTGCTTATAGTCCTCT+AGG - Chr3:85337207-85337226 MsG0380016578.01.T01:intron 35.0%
GTGCTGTATATTATAGTCAC+TGG + Chr3:85336937-85336956 None:intergenic 35.0%
TAAATATGTTCCAAGCCTGA+AGG - Chr3:85337631-85337650 MsG0380016578.01.T01:intron 35.0%
TATCTTGCATGAGTGGTTTA+AGG - Chr3:85337680-85337699 MsG0380016578.01.T01:intron 35.0%
TCCGATGATTGAAGAGATTA+AGG - Chr3:85336063-85336082 MsG0380016578.01.T01:intron 35.0%
TCTTGTTACTACTCTTTCCT+CGG + Chr3:85335325-85335344 None:intergenic 35.0%
TGGACATAAGGATCTTCAAA+GGG - Chr3:85336029-85336048 MsG0380016578.01.T01:intron 35.0%
TGTTATGTGCTATCATCCTT+CGG + Chr3:85338529-85338548 None:intergenic 35.0%
TTATCAGTAGGATTCGAACT+TGG - Chr3:85337710-85337729 MsG0380016578.01.T01:intron 35.0%
TTGGACATAAGGATCTTCAA+AGG - Chr3:85336028-85336047 MsG0380016578.01.T01:intron 35.0%
TTTATTTGATTGGGCAAGGT+TGG + Chr3:85339173-85339192 None:intergenic 35.0%
! AAACTAAAACCAAGCTCTGA+TGG - Chr3:85338879-85338898 MsG0380016578.01.T01:intron 35.0%
! AAAGGTACAATTCCAATTCC+TGG - Chr3:85339250-85339269 MsG0380016578.01.T01:CDS 35.0%
! AAGGGTTTTCTTCATGAAGA+CGG - Chr3:85335747-85335766 MsG0380016578.01.T01:intron 35.0%
! ATTTTCTTTGCTAAGCATGG+GGG - Chr3:85337137-85337156 MsG0380016578.01.T01:CDS 35.0%
! CAACAAAATCCTTGATGACT+TGG - Chr3:85335061-85335080 MsG0380016578.01.T01:CDS 35.0%
! GCAATTTTCTTTGCTAAGCA+TGG - Chr3:85337134-85337153 MsG0380016578.01.T01:CDS 35.0%
! TCATCACTAATTTGGAGTCA+AGG - Chr3:85336160-85336179 MsG0380016578.01.T01:intron 35.0%
! TCCACACATCAAGTTGTTAT+TGG - Chr3:85336847-85336866 MsG0380016578.01.T01:intron 35.0%
! TCTCTTTTATGAGTGGAGTT+GGG + Chr3:85338686-85338705 None:intergenic 35.0%
! TGATGACTTGGAGAATATTG+AGG - Chr3:85335073-85335092 MsG0380016578.01.T01:intron 35.0%
! TTTGAAGGTTGATTCACCTT+GGG - Chr3:85336544-85336563 MsG0380016578.01.T01:intron 35.0%
!! AAACTACAGGTTTTGGTAGT+TGG + Chr3:85337979-85337998 None:intergenic 35.0%
!! ACTTGAGAGTTGATGAAAAC+GGG - Chr3:85335255-85335274 MsG0380016578.01.T01:CDS 35.0%
!! AGCAAGGTGTTGATGTTAAA+TGG - Chr3:85336134-85336153 MsG0380016578.01.T01:intron 35.0%
!! ATGAGTAGAGTTGTTGCTTT+AGG + Chr3:85334995-85335014 None:intergenic 35.0%
!! CAAGAGTATTTGTGATTCTC+TGG - Chr3:85337176-85337195 MsG0380016578.01.T01:CDS 35.0%
!! CTATTTTGAGAGAGATAGAG+GGG - Chr3:85336453-85336472 MsG0380016578.01.T01:intron 35.0%
!! GACTATTTTGAGAGAGATAG+AGG - Chr3:85336451-85336470 MsG0380016578.01.T01:intron 35.0%
!! GACTTGAGAGTTGATGAAAA+CGG - Chr3:85335254-85335273 MsG0380016578.01.T01:CDS 35.0%
!! GCAAGGTGTTGATGTTAAAT+GGG - Chr3:85336135-85336154 MsG0380016578.01.T01:intron 35.0%
!! GTTGGTTGGTCTTTCTTTAA+AGG + Chr3:85339090-85339109 None:intergenic 35.0%
!! TATTTTGAGAGAGATAGAGG+GGG - Chr3:85336454-85336473 MsG0380016578.01.T01:intron 35.0%
!! TGTTTTGGGTGGTTTTTTAG+GGG + Chr3:85338274-85338293 None:intergenic 35.0%
!!! AGTTTTGAGAGAAGTAGCAA+AGG - Chr3:85334896-85334915 MsG0380016578.01.T01:three_prime_UTR 35.0%
!!! CTTGTTTTGGGTGGTTTTTT+AGG + Chr3:85338276-85338295 None:intergenic 35.0%
!!! TAGACTTTGGTAGTGGTTTT+AGG - Chr3:85337783-85337802 MsG0380016578.01.T01:intron 35.0%
AAAAGAACCCTCGAAACATG+AGG - Chr3:85338403-85338422 MsG0380016578.01.T01:intron 40.0%
AAGGATTGTCCGGAGATTAA+TGG - Chr3:85335389-85335408 MsG0380016578.01.T01:intron 40.0%
AAGGCCTAAGTGTTTCAAGA+GGG - Chr3:85335279-85335298 MsG0380016578.01.T01:CDS 40.0%
AAGGTGATGTTTCTCACCTT+GGG - Chr3:85335483-85335502 MsG0380016578.01.T01:intron 40.0%
AATAGCAATCCCCTGTGATT+TGG + Chr3:85337386-85337405 None:intergenic 40.0%
AATATCACTCAGTTGCTCAG+AGG - Chr3:85337556-85337575 MsG0380016578.01.T01:CDS 40.0%
ACCATGCTCTATGGAAAAGA+AGG - Chr3:85335170-85335189 MsG0380016578.01.T01:intron 40.0%
ACCCTATTTCATGCCTTAGT+AGG + Chr3:85338663-85338682 None:intergenic 40.0%
ACCCTCAGAGACAATTTGTA+CGG + Chr3:85335420-85335439 None:intergenic 40.0%
ACGCATCACATTGTTATGTC+AGG - Chr3:85339204-85339223 MsG0380016578.01.T01:CDS 40.0%
ACTCTACTCATTCAAGATGG+TGG - Chr3:85335004-85335023 MsG0380016578.01.T01:three_prime_UTR 40.0%
AGGATTGAGTCTCTTGGTTA+CGG - Chr3:85336577-85336596 MsG0380016578.01.T01:intron 40.0%
AGTTCCATCAACTTTGGCAA+AGG - Chr3:85338024-85338043 MsG0380016578.01.T01:intron 40.0%
ATTGAGTAGGACGCATTTCT+CGG + Chr3:85338713-85338732 None:intergenic 40.0%
ATTTCATGCCTTAGTAGGGA+AGG + Chr3:85338658-85338677 None:intergenic 40.0%
CAAGTCAATAACACAAGCAG+AGG - Chr3:85339276-85339295 MsG0380016578.01.T01:CDS 40.0%
CATTCCCTCTTGAAACACTT+AGG + Chr3:85335286-85335305 None:intergenic 40.0%
CCAACAATAGTGCTAGTGAA+TGG - Chr3:85337875-85337894 MsG0380016578.01.T01:intron 40.0%
CCATTCACTAGCACTATTGT+TGG + Chr3:85337878-85337897 None:intergenic 40.0%
CCCTACTAAGGCATGAAATA+GGG - Chr3:85338659-85338678 MsG0380016578.01.T01:intron 40.0%
CCCTATTTCATGCCTTAGTA+GGG + Chr3:85338662-85338681 None:intergenic 40.0%
CCTAGTGTAGTTTGGATACA+AGG - Chr3:85335921-85335940 MsG0380016578.01.T01:intron 40.0%
CCTATTCTTCTGTCATACTC+AGG - Chr3:85338092-85338111 MsG0380016578.01.T01:intron 40.0%
CCTGAGTATGACAGAAGAAT+AGG + Chr3:85338095-85338114 None:intergenic 40.0%
CCTTATGTCCAAACTACTCA+AGG + Chr3:85336020-85336039 None:intergenic 40.0%
CCTTGAGTAGTTTGGACATA+AGG - Chr3:85336017-85336036 MsG0380016578.01.T01:intron 40.0%
CCTTGTATCCAAACTACACT+AGG + Chr3:85335924-85335943 None:intergenic 40.0%
CTAAGTGTTTCAAGAGGGAA+TGG - Chr3:85335284-85335303 MsG0380016578.01.T01:CDS 40.0%
CTCTCAAAACTTTATCTCCG+AGG + Chr3:85334887-85334906 None:intergenic 40.0%
GACTCAAAATTGGAGTTTGG+AGG - Chr3:85336202-85336221 MsG0380016578.01.T01:intron 40.0%
GCTATACATTCTTCAACCTC+CGG + Chr3:85335781-85335800 None:intergenic 40.0%
GCTTACAGTTCCATCAACTT+TGG - Chr3:85338018-85338037 MsG0380016578.01.T01:intron 40.0%
GCTTTCTGTTCGGGAAAAAT+CGG - Chr3:85336305-85336324 MsG0380016578.01.T01:intron 40.0%
GGAATTACCCTAAAAGTCCA+AGG - Chr3:85335810-85335829 MsG0380016578.01.T01:intron 40.0%
GGACATAAGGATCTTCAAAG+GGG - Chr3:85336030-85336049 MsG0380016578.01.T01:intron 40.0%
TAAGCAAATACTTCCAGGAC+TGG - Chr3:85337406-85337425 MsG0380016578.01.T01:CDS 40.0%
TACTCATGATCTACCTGTTG+AGG - Chr3:85335584-85335603 MsG0380016578.01.T01:intron 40.0%
TAGGACAAGGACAGTTATGT+GGG + Chr3:85339112-85339131 None:intergenic 40.0%
TAGGACTTGGAATGCTTACT+GGG - Chr3:85337226-85337245 MsG0380016578.01.T01:intron 40.0%
TCACCTTGGGAAACACTATT+AGG - Chr3:85336557-85336576 MsG0380016578.01.T01:intron 40.0%
TCACTTCAAGAAGGATTGTC+CGG - Chr3:85335379-85335398 MsG0380016578.01.T01:intron 40.0%
TCCCTACTAAGGCATGAAAT+AGG - Chr3:85338658-85338677 MsG0380016578.01.T01:intron 40.0%
TCCGTACAAATTGTCTCTGA+GGG - Chr3:85335416-85335435 MsG0380016578.01.T01:intron 40.0%
TCTCATTCAGCAACTCAATG+AGG + Chr3:85336964-85336983 None:intergenic 40.0%
TCTCTCAGGGAACTCAATAA+AGG + Chr3:85337434-85337453 None:intergenic 40.0%
TGTAAACTTGTGGAGCTACT+TGG - Chr3:85336086-85336105 MsG0380016578.01.T01:intron 40.0%
TGTCTCGTATTGAAGAGGTA+TGG - Chr3:85335871-85335890 MsG0380016578.01.T01:intron 40.0%
TGTCTCTTGGCAACAAACTA+GGG - Chr3:85336521-85336540 MsG0380016578.01.T01:intron 40.0%
TTAAACACTCAACATCAGCC+TGG - Chr3:85335544-85335563 MsG0380016578.01.T01:intron 40.0%
TTCAAGGTGGAAGACATAGT+GGG - Chr3:85335613-85335632 MsG0380016578.01.T01:intron 40.0%
TTCCGTACAAATTGTCTCTG+AGG - Chr3:85335415-85335434 MsG0380016578.01.T01:intron 40.0%
TTCGTCGTATGTATCTCTTC+TGG + Chr3:85339641-85339660 None:intergenic 40.0%
TTGATGGAACTGTAAGCATG+CGG + Chr3:85338015-85338034 None:intergenic 40.0%
TTGTCAGTTGTAACACACCT+AGG + Chr3:85339131-85339150 None:intergenic 40.0%
TTGTCTCTTGGCAACAAACT+AGG - Chr3:85336520-85336539 MsG0380016578.01.T01:intron 40.0%
TTGTTCGTTTAGCAGCAGTT+TGG + Chr3:85338486-85338505 None:intergenic 40.0%
TTTCTATGACCATCAGAGCT+TGG + Chr3:85338891-85338910 None:intergenic 40.0%
! AATTGTCTCTGAGGGTTATG+AGG - Chr3:85335424-85335443 MsG0380016578.01.T01:intron 40.0%
! CAATCACCCTTGGACTTTTA+GGG + Chr3:85335820-85335839 None:intergenic 40.0%
! CATGTTTCGAGGGTTCTTTT+TGG + Chr3:85338403-85338422 None:intergenic 40.0%
! CGGTTTGTCTCTTTTATGAG+TGG + Chr3:85338693-85338712 None:intergenic 40.0%
! GTACTCATTTGCTAGTTGAG+AGG - Chr3:85335638-85335657 MsG0380016578.01.T01:intron 40.0%
! GTCTCTTTTATGAGTGGAGT+TGG + Chr3:85338687-85338706 None:intergenic 40.0%
! GTTTGAAGGTTGATTCACCT+TGG - Chr3:85336543-85336562 MsG0380016578.01.T01:intron 40.0%
! GTTTTCTTCATGAAGACGGA+AGG - Chr3:85335751-85335770 MsG0380016578.01.T01:intron 40.0%
! TCACTAATTTGGAGTCAAGG+TGG - Chr3:85336163-85336182 MsG0380016578.01.T01:intron 40.0%
! TCATCATATAGTGGAACGGA+GGG - Chr3:85336677-85336696 MsG0380016578.01.T01:intron 40.0%
! TCATTTGCTAGTTGAGAGGT+TGG - Chr3:85335642-85335661 MsG0380016578.01.T01:intron 40.0%
! TGACAAAGTCTTTGGCTCAT+CGG - Chr3:85334964-85334983 MsG0380016578.01.T01:three_prime_UTR 40.0%
! TTGCTGAAAGTACAAATCGG+TGG - Chr3:85336238-85336257 MsG0380016578.01.T01:intron 40.0%
!! AAAAGAAGGCACTGTTACCT+TGG - Chr3:85335184-85335203 MsG0380016578.01.T01:intron 40.0%
!! ATATTTTGGATCATCCTGCG+AGG + Chr3:85339376-85339395 None:intergenic 40.0%
!! ATTCAAGATGGTGGAGTCAA+AGG - Chr3:85335013-85335032 MsG0380016578.01.T01:three_prime_UTR 40.0%
!! ATTGACTTGACTCCAGGAAT+TGG + Chr3:85339265-85339284 None:intergenic 40.0%
!! CTTGAGAGTTGATGAAAACG+GGG - Chr3:85335256-85335275 MsG0380016578.01.T01:CDS 40.0%
!! TGTGTTATTGACTTGACTCC+AGG + Chr3:85339271-85339290 None:intergenic 40.0%
AAAACAAGGAACAAACCCGC+TGG - Chr3:85338288-85338307 MsG0380016578.01.T01:intron 45.0%
AAACGAGCTACTTCAGTTGG+AGG - Chr3:85339333-85339352 MsG0380016578.01.T01:CDS 45.0%
AAGACGCAAAACCATGTCAC+AGG - Chr3:85337466-85337485 MsG0380016578.01.T01:CDS 45.0%
AAGGTGATCTTCAAGGAAGC+GGG - Chr3:85335845-85335864 MsG0380016578.01.T01:intron 45.0%
ACAACTTGATGTGTGGAGCA+AGG + Chr3:85336844-85336863 None:intergenic 45.0%
ACAAGGACAGTTATGTGGGT+TGG + Chr3:85339108-85339127 None:intergenic 45.0%
ACCTTAACCTCTTCAGCCAT+CGG + Chr3:85335971-85335990 None:intergenic 45.0%
ACCTTCTTCCTTCCCTACTA+AGG - Chr3:85338647-85338666 MsG0380016578.01.T01:intron 45.0%
AGAATGTATAGCACGGCTTG+TGG - Chr3:85335789-85335808 MsG0380016578.01.T01:intron 45.0%
AGAGGAAAATTTGGGTGCTC+TGG - Chr3:85339294-85339313 MsG0380016578.01.T01:CDS 45.0%
AGATTGGATCAGAAGACCGA+AGG + Chr3:85338789-85338808 None:intergenic 45.0%
AGCAAAACCACAAAAGCAGC+AGG - Chr3:85338569-85338588 MsG0380016578.01.T01:intron 45.0%
AGCTGCTTGAACTTCTTCCA+AGG + Chr3:85335204-85335223 None:intergenic 45.0%
AGGCTCTATGCATCTTCCTT+CGG - Chr3:85338112-85338131 MsG0380016578.01.T01:intron 45.0%
AGGTCAATTTGGACCGAACT+GGG - Chr3:85336719-85336738 MsG0380016578.01.T01:intron 45.0%
AGGTGATGTTTCTCACCTTG+GGG - Chr3:85335484-85335503 MsG0380016578.01.T01:intron 45.0%
AGTAGGGAAGGAAGAAGGTA+GGG + Chr3:85338646-85338665 None:intergenic 45.0%
AGTGTTTCAAGAGGGAATGG+TGG - Chr3:85335287-85335306 MsG0380016578.01.T01:CDS 45.0%
ATAGCAGCCTCATGTTTCGA+GGG + Chr3:85338413-85338432 None:intergenic 45.0%
ATCAGAAGACCGAAGGAATG+TGG + Chr3:85338782-85338801 None:intergenic 45.0%
CAACTGAAGTAGCTCGTTTG+AGG + Chr3:85339332-85339351 None:intergenic 45.0%
CAACTTGATGTGTGGAGCAA+GGG + Chr3:85336843-85336862 None:intergenic 45.0%
CAAGACGCACTAATAAGCTC+GGG - Chr3:85338185-85338204 MsG0380016578.01.T01:intron 45.0%
CAAGATGGGTCACTTCAAGA+AGG - Chr3:85335370-85335389 MsG0380016578.01.T01:intron 45.0%
CAAGGAGTTGACTAAGTCGA+AGG - Chr3:85335232-85335251 MsG0380016578.01.T01:CDS 45.0%
CAAGGTGATCTTCAAGGAAG+CGG - Chr3:85335844-85335863 MsG0380016578.01.T01:intron 45.0%
CACATAACTGTCCTTGTCCT+AGG - Chr3:85339111-85339130 MsG0380016578.01.T01:CDS 45.0%
CATAAGGATCTTCAAAGGGG+CGG - Chr3:85336033-85336052 MsG0380016578.01.T01:intron 45.0%
CCATCAACTTTGGCAAAGGT+AGG - Chr3:85338028-85338047 MsG0380016578.01.T01:intron 45.0%
CCTAAAAGTCCAAGGGTGAT+TGG - Chr3:85335818-85335837 MsG0380016578.01.T01:intron 45.0%
CCTACCTTTGCCAAAGTTGA+TGG + Chr3:85338031-85338050 None:intergenic 45.0%
CTACTACACAGTACACCTTC+AGG + Chr3:85337658-85337677 None:intergenic 45.0%
CTAGGACAAGGACAGTTATG+TGG + Chr3:85339113-85339132 None:intergenic 45.0%
CTAGGACTTGGAATGCTTAC+TGG - Chr3:85337225-85337244 MsG0380016578.01.T01:intron 45.0%
CTCAAACGAGCTACTTCAGT+TGG - Chr3:85339330-85339349 MsG0380016578.01.T01:CDS 45.0%
CTCAATAAAGGATCCAGTCC+TGG + Chr3:85337422-85337441 None:intergenic 45.0%
CTTATTAGTGCGTCTTGCAC+GGG + Chr3:85338182-85338201 None:intergenic 45.0%
CTTCGACTTAGTCAACTCCT+TGG + Chr3:85335234-85335253 None:intergenic 45.0%
CTTGGAGGTGGTTATTGAGT+AGG + Chr3:85338726-85338745 None:intergenic 45.0%
GAAGGCCTAAGTGTTTCAAG+AGG - Chr3:85335278-85335297 MsG0380016578.01.T01:CDS 45.0%
GAAGGTGATGTTTCTCACCT+TGG - Chr3:85335482-85335501 MsG0380016578.01.T01:intron 45.0%
GAGGAAAATTTGGGTGCTCT+GGG - Chr3:85339295-85339314 MsG0380016578.01.T01:CDS 45.0%
GAGGTTAAGGTGTGTACTTG+TGG - Chr3:85335980-85335999 MsG0380016578.01.T01:intron 45.0%
GCAAAACCACAAAAGCAGCA+GGG - Chr3:85338570-85338589 MsG0380016578.01.T01:intron 45.0%
GCAAGACGCACTAATAAGCT+CGG - Chr3:85338184-85338203 MsG0380016578.01.T01:intron 45.0%
GCGTAAATGTCAACACACCT+TGG + Chr3:85337282-85337301 None:intergenic 45.0%
GCTCTTGTCAAACAAGTGCA+AGG + Chr3:85337953-85337972 None:intergenic 45.0%
GCTGGGATTTGGGTAGAATT+AGG - Chr3:85336606-85336625 MsG0380016578.01.T01:intron 45.0%
GCTTATTAGTGCGTCTTGCA+CGG + Chr3:85338183-85338202 None:intergenic 45.0%
GGAGATGTCTCGTATTGAAG+AGG - Chr3:85335866-85335885 MsG0380016578.01.T01:intron 45.0%
GGATACAAGGATCTTCGAGA+AGG - Chr3:85335934-85335953 MsG0380016578.01.T01:intron 45.0%
GGATTGAGTCTCTTGGTTAC+GGG - Chr3:85336578-85336597 MsG0380016578.01.T01:intron 45.0%
GGATTTGGGTAGAATTAGGC+GGG - Chr3:85336610-85336629 MsG0380016578.01.T01:intron 45.0%
GGCAACAAACTAGGGTTTGA+AGG - Chr3:85336529-85336548 MsG0380016578.01.T01:intron 45.0%
GGGATTTGGGTAGAATTAGG+CGG - Chr3:85336609-85336628 MsG0380016578.01.T01:intron 45.0%
GGTCCAAATTGACCTAGTCT+GGG + Chr3:85336714-85336733 None:intergenic 45.0%
GTAAGCATTCCAAGTCCTAG+AGG + Chr3:85337225-85337244 None:intergenic 45.0%
GTCCAAATTGACCTAGTCTG+GGG + Chr3:85336713-85336732 None:intergenic 45.0%
GTTCAAGGTGGAAGACATAG+TGG - Chr3:85335612-85335631 MsG0380016578.01.T01:intron 45.0%
GTTGTAACACACCTAGGACA+AGG + Chr3:85339125-85339144 None:intergenic 45.0%
TACAAGGATCTTCGAGAAGG+CGG - Chr3:85335937-85335956 MsG0380016578.01.T01:intron 45.0%
TAGGTCAATTTGGACCGAAC+TGG - Chr3:85336718-85336737 MsG0380016578.01.T01:intron 45.0%
TAGTAGGGAAGGAAGAAGGT+AGG + Chr3:85338647-85338666 None:intergenic 45.0%
TATAGCAGCCTCATGTTTCG+AGG + Chr3:85338414-85338433 None:intergenic 45.0%
TATGCTCTAGTGGTGAGCAA+GGG - Chr3:85335729-85335748 MsG0380016578.01.T01:intron 45.0%
TCAGCATCCAAACTTCCAAC+TGG - Chr3:85337255-85337274 MsG0380016578.01.T01:intron 45.0%
TCATGATCTACCTGTTGAGG+TGG - Chr3:85335587-85335606 MsG0380016578.01.T01:intron 45.0%
TCCAAATTGACCTAGTCTGG+GGG + Chr3:85336712-85336731 None:intergenic 45.0%
TCCCAAAAGGCAGCCAAAAT+CGG + Chr3:85336284-85336303 None:intergenic 45.0%
TGGATGCAAGGTGATCTTCA+AGG - Chr3:85335838-85335857 MsG0380016578.01.T01:intron 45.0%
TTAGGTGGAGTTGAACACAC+CGG - Chr3:85335675-85335694 MsG0380016578.01.T01:intron 45.0%
TTCAGCAACTCAATGAGGCA+TGG + Chr3:85336959-85336978 None:intergenic 45.0%
TTCTGTTCGGGAAAAATCGG+TGG - Chr3:85336308-85336327 MsG0380016578.01.T01:intron 45.0%
TTTCTTCCGCCACATTCCTT+CGG - Chr3:85338770-85338789 MsG0380016578.01.T01:intron 45.0%
! AAAATTTGGGTGCTCTGGGT+TGG - Chr3:85339299-85339318 MsG0380016578.01.T01:CDS 45.0%
! CCAATCACCCTTGGACTTTT+AGG + Chr3:85335821-85335840 None:intergenic 45.0%
! CTCATCATATAGTGGAACGG+AGG - Chr3:85336676-85336695 MsG0380016578.01.T01:intron 45.0%
! GAATGTGGCGGAAGAAATAG+TGG + Chr3:85338767-85338786 None:intergenic 45.0%
! GCCTTCTTTTCCATAGAGCA+TGG + Chr3:85335174-85335193 None:intergenic 45.0%
! GTTTAGCAGCAGTTTGGAGT+TGG + Chr3:85338480-85338499 None:intergenic 45.0%
! TTAGGGGTTTTTGTTCGAGC+CGG + Chr3:85338258-85338277 None:intergenic 45.0%
!! AGAGTTGATGAAAACGGGGA+AGG - Chr3:85335260-85335279 MsG0380016578.01.T01:CDS 45.0%
!! AGCGGGTTTGTTCCTTGTTT+TGG + Chr3:85338289-85338308 None:intergenic 45.0%
!! CTGCTTTTGTGGTTTTGCTG+GGG + Chr3:85338568-85338587 None:intergenic 45.0%
!! CTTTTGGGAGGCTTTCTGTT+CGG - Chr3:85336295-85336314 MsG0380016578.01.T01:intron 45.0%
!! GCTTATAGTCCTCTAGGACT+TGG - Chr3:85337213-85337232 MsG0380016578.01.T01:intron 45.0%
!! TCAAGCAGCTTTGAGAACCA+AGG - Chr3:85335214-85335233 MsG0380016578.01.T01:CDS 45.0%
!! TGCTTTGATGGTGTGCTGTT+TGG - Chr3:85335454-85335473 MsG0380016578.01.T01:intron 45.0%
!! TTTCGAGGGTTCTTTTTGGC+AGG + Chr3:85338399-85338418 None:intergenic 45.0%
!! TTTGATGGTGTGCTGTTTGG+AGG - Chr3:85335457-85335476 MsG0380016578.01.T01:intron 45.0%
!! TTTTGGGAGGCTTTCTGTTC+GGG - Chr3:85336296-85336315 MsG0380016578.01.T01:intron 45.0%
!!! CTATCATCCTTCGGTGCTTT+TGG + Chr3:85338520-85338539 None:intergenic 45.0%
!!! GCGGGTTTGTTCCTTGTTTT+GGG + Chr3:85338288-85338307 None:intergenic 45.0%
!!! GCTGCTTTTGTGGTTTTGCT+GGG + Chr3:85338569-85338588 None:intergenic 45.0%
!!! GGTTTGTTCCTTGTTTTGGG+TGG + Chr3:85338285-85338304 None:intergenic 45.0%
!!! TGCTGCTTTTGTGGTTTTGC+TGG + Chr3:85338570-85338589 None:intergenic 45.0%
AAGCAAGGGAAAGAGCAGCA+AGG - Chr3:85336118-85336137 MsG0380016578.01.T01:intron 50.0%
ACCTTGCATCCAATCACCCT+TGG + Chr3:85335830-85335849 None:intergenic 50.0%
AGAAGACCGAAGGAATGTGG+CGG + Chr3:85338779-85338798 None:intergenic 50.0%
AGACATTCCGATGGCTGAAG+AGG - Chr3:85335961-85335980 MsG0380016578.01.T01:intron 50.0%
AGATAGAGGGGGCTGAAACA+AGG - Chr3:85336465-85336484 MsG0380016578.01.T01:intron 50.0%
AGTAGCAAAGGAACCAACCG+CGG - Chr3:85334908-85334927 MsG0380016578.01.T01:three_prime_UTR 50.0%
AGTCTCTTGGTTACGGGAAG+AGG - Chr3:85336584-85336603 MsG0380016578.01.T01:intron 50.0%
AGTCTGCAACTTGAGCTGCT+GGG + Chr3:85339530-85339549 None:intergenic 50.0%
ATCGGTTGCCGCTAAATCAC+CGG - Chr3:85338236-85338255 MsG0380016578.01.T01:intron 50.0%
ATCTCCGAGGCACAAGACAA+TGG + Chr3:85334874-85334893 None:intergenic 50.0%
CAACCACTTGCGCTAGACTT+TGG - Chr3:85337770-85337789 MsG0380016578.01.T01:intron 50.0%
CCAAACAGCTAGCTGCCAAA+CGG - Chr3:85338602-85338621 MsG0380016578.01.T01:intron 50.0%
CCAAACTTCCAACTGGACCA+AGG - Chr3:85337262-85337281 MsG0380016578.01.T01:intron 50.0%
CCTTGGTCCAGTTGGAAGTT+TGG + Chr3:85337265-85337284 None:intergenic 50.0%
CGAACAGAAAGCCTCCCAAA+AGG + Chr3:85336297-85336316 None:intergenic 50.0%
CGGTCCAAATTGACCTAGTC+TGG + Chr3:85336715-85336734 None:intergenic 50.0%
CGTTTGGCAGCTAGCTGTTT+GGG + Chr3:85338604-85338623 None:intergenic 50.0%
CTACCAAAGTCTAGCGCAAG+TGG + Chr3:85337776-85337795 None:intergenic 50.0%
CTATGCTCTAGTGGTGAGCA+AGG - Chr3:85335728-85335747 MsG0380016578.01.T01:intron 50.0%
CTCCGTAAGTTGCTCCATGA+TGG + Chr3:85335039-85335058 None:intergenic 50.0%
CTTGCGCTAGACTTTGGTAG+TGG - Chr3:85337776-85337795 MsG0380016578.01.T01:intron 50.0%
GAGGTTGGAAGCTCAGCTTT+AGG - Chr3:85335657-85335676 MsG0380016578.01.T01:intron 50.0%
GATAGAGGGGGCTGAAACAA+GGG - Chr3:85336466-85336485 MsG0380016578.01.T01:intron 50.0%
GCCTTAGTAGGGAAGGAAGA+AGG + Chr3:85338651-85338670 None:intergenic 50.0%
GGAAAAATCGGTGGCCGATT+TGG - Chr3:85336317-85336336 MsG0380016578.01.T01:intron 50.0%
GGCCATCATGGAGCAACTTA+CGG - Chr3:85335034-85335053 MsG0380016578.01.T01:exon 50.0%
GGTGATGTTTCTCACCTTGG+GGG - Chr3:85335485-85335504 MsG0380016578.01.T01:intron 50.0%
GTACAAATCGGTGGCCGATT+TGG - Chr3:85336247-85336266 MsG0380016578.01.T01:intron 50.0%
GTACGACTATGGAGGACCTT+GGG - Chr3:85335703-85335722 MsG0380016578.01.T01:intron 50.0%
GTAGGGAAGGAAGAAGGTAG+GGG + Chr3:85338645-85338664 None:intergenic 50.0%
GTTTCAAGAGGGAATGGTGG+AGG - Chr3:85335290-85335309 MsG0380016578.01.T01:CDS 50.0%
TAGGTGGAGTTGAACACACC+GGG - Chr3:85335676-85335695 MsG0380016578.01.T01:intron 50.0%
TCAACACACCTTGGTCCAGT+TGG + Chr3:85337273-85337292 None:intergenic 50.0%
TCCAAGGGTGATTGGATGCA+AGG - Chr3:85335826-85335845 MsG0380016578.01.T01:intron 50.0%
TCCCCCAGACTAGGTCAATT+TGG - Chr3:85336708-85336727 MsG0380016578.01.T01:intron 50.0%
TCCGATGGCTGAAGAGGTTA+AGG - Chr3:85335967-85335986 MsG0380016578.01.T01:intron 50.0%
TCTGAGGGTTATGAGGATGC+AGG - Chr3:85335431-85335450 MsG0380016578.01.T01:intron 50.0%
TGAGGATGCAGGTGCTTTGA+TGG - Chr3:85335442-85335461 MsG0380016578.01.T01:intron 50.0%
TGATCTACCTGTTGAGGTGG+AGG - Chr3:85335590-85335609 MsG0380016578.01.T01:intron 50.0%
TGGAGCTCAGAACAAGGACA+CGG + Chr3:85338828-85338847 None:intergenic 50.0%
TGTTCGAGCCGGTGATTTAG+CGG + Chr3:85338247-85338266 None:intergenic 50.0%
! AGTGCCATTGTCTTGTGCCT+CGG - Chr3:85334867-85334886 MsG0380016578.01.T01:three_prime_UTR 50.0%
! CTTGGTGTAGTGGGAAGCAA+GGG - Chr3:85336104-85336123 MsG0380016578.01.T01:intron 50.0%
! GAGTTGGAGTCTCGGTTTTG+AGG + Chr3:85338464-85338483 None:intergenic 50.0%
! GCAGTTTGGAGTTGGAGTCT+CGG + Chr3:85338472-85338491 None:intergenic 50.0%
! GGCAGGCTGTCTTTTTCTGT+GGG + Chr3:85338382-85338401 None:intergenic 50.0%
! GGCATTTGGAGCTCAGAACA+AGG + Chr3:85338834-85338853 None:intergenic 50.0%
! GGTTTTGCTGGGGTAGTTCT+TGG + Chr3:85338558-85338577 None:intergenic 50.0%
! TGGCAGGCTGTCTTTTTCTG+TGG + Chr3:85338383-85338402 None:intergenic 50.0%
! TGTGGCGGAAGAAATAGTGG+AGG + Chr3:85338764-85338783 None:intergenic 50.0%
!! ACTTGGTGTAGTGGGAAGCA+AGG - Chr3:85336103-85336122 MsG0380016578.01.T01:intron 50.0%
!! CATGAAGACGGAAGGCATTC+CGG - Chr3:85335759-85335778 MsG0380016578.01.T01:intron 50.0%
!! CGGTGGCCGATTTGGAAAAT+CGG - Chr3:85336255-85336274 MsG0380016578.01.T01:intron 50.0%
!! GAAACCACCAAAAGCACCGA+AGG - Chr3:85338510-85338529 MsG0380016578.01.T01:intron 50.0%
!! GGAAAATCGGTGGCCGATTT+TGG - Chr3:85336268-85336287 MsG0380016578.01.T01:intron 50.0%
!! GGACAGTTATGTGGGTTGGT+TGG + Chr3:85339104-85339123 None:intergenic 50.0%
!! GTGGAGCTACTTGGTGTAGT+GGG - Chr3:85336095-85336114 MsG0380016578.01.T01:intron 50.0%
!! GTGTGCTGTTTGGAGGATGA+AGG - Chr3:85335464-85335483 MsG0380016578.01.T01:intron 50.0%
!! GTTGGAAGCTCAGCTTTAGG+TGG - Chr3:85335660-85335679 MsG0380016578.01.T01:intron 50.0%
!! TGGCCGATTTGGAAAATCGG+TGG - Chr3:85336258-85336277 MsG0380016578.01.T01:intron 50.0%
!! TGTGGAGCTACTTGGTGTAG+TGG - Chr3:85336094-85336113 MsG0380016578.01.T01:intron 50.0%
!!! CGGCCACCGATTTTCCAAAT+CGG + Chr3:85336264-85336283 None:intergenic 50.0%
!!! GATTTTGGCTGCCTTTTGGG+AGG - Chr3:85336283-85336302 MsG0380016578.01.T01:intron 50.0%
!!! GCCGATTTTGGCTGCCTTTT+GGG - Chr3:85336280-85336299 MsG0380016578.01.T01:intron 50.0%
!!! TCATCCTTCGGTGCTTTTGG+TGG + Chr3:85338517-85338536 None:intergenic 50.0%
AAAAGATGGGCCAAGCCTGC+AGG + Chr3:85338055-85338074 None:intergenic 55.0%
AAAGATGGGCCAAGCCTGCA+GGG + Chr3:85338054-85338073 None:intergenic 55.0%
AAGGTAGGGGTGGCTTCTTG+GGG + Chr3:85338632-85338651 None:intergenic 55.0%
ACGGGAAGAGGCTGGGATTT+GGG - Chr3:85336596-85336615 MsG0380016578.01.T01:intron 55.0%
AGAAGGTAGGGGTGGCTTCT+TGG + Chr3:85338634-85338653 None:intergenic 55.0%
AGGATCTTCAAAGGGGCGGA+AGG - Chr3:85336037-85336056 MsG0380016578.01.T01:intron 55.0%
AGTACACCTTCAGGCCCTTC+AGG + Chr3:85337649-85337668 None:intergenic 55.0%
ATTCTTACCACCGCCTCTCC+AGG + Chr3:85335565-85335584 None:intergenic 55.0%
CACTCAACATCAGCCTGGAG+AGG - Chr3:85335549-85335568 MsG0380016578.01.T01:intron 55.0%
CAGTCTGCAACTTGAGCTGC+TGG + Chr3:85339531-85339550 None:intergenic 55.0%
CCACTAGAGCATAGCACCCA+AGG + Chr3:85335722-85335741 None:intergenic 55.0%
CCGTTTGGCAGCTAGCTGTT+TGG + Chr3:85338605-85338624 None:intergenic 55.0%
CCTGTTGAGGTGGAGGTTCA+AGG - Chr3:85335597-85335616 MsG0380016578.01.T01:intron 55.0%
CCTTGAACCTCCACCTCAAC+AGG + Chr3:85335600-85335619 None:intergenic 55.0%
CTCCATAGTCGTACCACTCC+CGG + Chr3:85335697-85335716 None:intergenic 55.0%
CTGCTTCTGCTCAGCTGTTG+GGG + Chr3:85338354-85338373 None:intergenic 55.0%
CTTGGTTACGGGAAGAGGCT+GGG - Chr3:85336589-85336608 MsG0380016578.01.T01:intron 55.0%
GAAGGCGGAAGACATTCCGA+TGG - Chr3:85335952-85335971 MsG0380016578.01.T01:intron 55.0%
GAAGGTAGGGGTGGCTTCTT+GGG + Chr3:85338633-85338652 None:intergenic 55.0%
GACGCACTAATAAGCTCGGG+TGG - Chr3:85338188-85338207 MsG0380016578.01.T01:intron 55.0%
GCACAAGACAATGGCACTCC+TGG + Chr3:85334865-85334884 None:intergenic 55.0%
GCTGCTTCTGCTCAGCTGTT+GGG + Chr3:85338355-85338374 None:intergenic 55.0%
GGTACGACTATGGAGGACCT+TGG - Chr3:85335702-85335721 MsG0380016578.01.T01:intron 55.0%
GGTGGAGTCAAAGGCCATCA+TGG - Chr3:85335022-85335041 MsG0380016578.01.T01:three_prime_UTR 55.0%
GTCTGCAACTTGAGCTGCTG+GGG + Chr3:85339529-85339548 None:intergenic 55.0%
GTTGAGGTGGAGGTTCAAGG+TGG - Chr3:85335600-85335619 MsG0380016578.01.T01:intron 55.0%
TACGGGAAGAGGCTGGGATT+TGG - Chr3:85336595-85336614 MsG0380016578.01.T01:intron 55.0%
TCAACATCAGCCTGGAGAGG+CGG - Chr3:85335552-85335571 MsG0380016578.01.T01:intron 55.0%
TCTTGGTTACGGGAAGAGGC+TGG - Chr3:85336588-85336607 MsG0380016578.01.T01:intron 55.0%
TGAGGCTGTGGTATGCTCGT+TGG + Chr3:85338446-85338465 None:intergenic 55.0%
! AGAGGGAATGGTGGAGGTAG+AGG - Chr3:85335296-85335315 MsG0380016578.01.T01:CDS 55.0%
! CCTTGGGTGCTATGCTCTAG+TGG - Chr3:85335719-85335738 MsG0380016578.01.T01:intron 55.0%
! TGCAGGCTTGGCCCATCTTT+TGG - Chr3:85338054-85338073 MsG0380016578.01.T01:intron 55.0%
! TGCTGCTTCTGCTCAGCTGT+TGG + Chr3:85338356-85338375 None:intergenic 55.0%
!! GAAGACCGAGATGGTGGACA+AGG - Chr3:85334839-85334858 MsG0380016578.01.T01:three_prime_UTR 55.0%
!! GGCATCGATGTGGGCAAAGA+TGG - Chr3:85334929-85334948 MsG0380016578.01.T01:three_prime_UTR 55.0%
!!! CTGTCACCCTGCTGCTTTTG+TGG + Chr3:85338579-85338598 None:intergenic 55.0%
!!! GAGTCTCGGTTTTGAGGCTG+TGG + Chr3:85338458-85338477 None:intergenic 55.0%
!!! GGCCGATTTTGGCTGCCTTT+TGG - Chr3:85336279-85336298 MsG0380016578.01.T01:intron 55.0%
AAAGGTAGGCCCTGCAGGCT+TGG - Chr3:85338042-85338061 MsG0380016578.01.T01:intron 60.0%
ACCTTCAGGCCCTTCAGGCT+TGG + Chr3:85337644-85337663 None:intergenic 60.0%
ACGAGCGGAGAAGACCGAGA+TGG - Chr3:85334830-85334849 MsG0380016578.01.T01:three_prime_UTR 60.0%
AGCGGAGAAGACCGAGATGG+TGG - Chr3:85334833-85334852 MsG0380016578.01.T01:three_prime_UTR 60.0%
AGGAACAAACCCGCTGGTCC+AGG - Chr3:85338294-85338313 MsG0380016578.01.T01:intron 60.0%
AGGTAGGGGTGGCTTCTTGG+GGG + Chr3:85338631-85338650 None:intergenic 60.0%
CAAACCCGCTGGTCCAGGAA+CGG - Chr3:85338299-85338318 MsG0380016578.01.T01:intron 60.0%
CACCGGGAGTGGTACGACTA+TGG - Chr3:85335692-85335711 MsG0380016578.01.T01:intron 60.0%
CGGGAGTGGTACGACTATGG+AGG - Chr3:85335695-85335714 MsG0380016578.01.T01:intron 60.0%
CTGCAACGTGCAGCTGTTGC+TGG + Chr3:85338328-85338347 None:intergenic 60.0%
CTTTGCCCACATCGATGCCG+CGG + Chr3:85334928-85334947 None:intergenic 60.0%
GCTTCTTGGGGGGTTCCGTT+TGG + Chr3:85338620-85338639 None:intergenic 60.0%
GGAGTTGAACACACCGGGAG+TGG - Chr3:85335681-85335700 MsG0380016578.01.T01:intron 60.0%
GGGAAGGAAGAAGGTAGGGG+TGG + Chr3:85338642-85338661 None:intergenic 60.0%
GGTGGAGGTAGAGGTAACCG+AGG - Chr3:85335305-85335324 MsG0380016578.01.T01:CDS 60.0%
TCCAAGCCTGAAGGGCCTGA+AGG - Chr3:85337640-85337659 MsG0380016578.01.T01:intron 60.0%
TCTACCAGGCATCACCCCCA+AGG + Chr3:85335502-85335521 None:intergenic 60.0%
TGCGTCTTGCACGGGCTTGT+TGG + Chr3:85338174-85338193 None:intergenic 60.0%
TTGGCAAAGGTAGGCCCTGC+AGG - Chr3:85338037-85338056 MsG0380016578.01.T01:intron 60.0%
!! AACCAACCGCGGCATCGATG+TGG - Chr3:85334919-85334938 MsG0380016578.01.T01:three_prime_UTR 60.0%
!! ACCAACCGCGGCATCGATGT+GGG - Chr3:85334920-85334939 MsG0380016578.01.T01:three_prime_UTR 60.0%
!! CCTGGCCTTGTCCACCATCT+CGG + Chr3:85334847-85334866 None:intergenic 60.0%
!! CTGTTGCTGGCTTCCGTTCC+TGG + Chr3:85338315-85338334 None:intergenic 60.0%
!! GAAGACGGAAGGCATTCCGG+AGG - Chr3:85335762-85335781 MsG0380016578.01.T01:intron 60.0%
ACATCAGCCTGGAGAGGCGG+TGG - Chr3:85335555-85335574 MsG0380016578.01.T01:intron 65.0%
CAGACGACCACCGCTCTACC+AGG + Chr3:85335516-85335535 None:intergenic 65.0%
CAGCACAGCAATCGCCTCGC+AGG - Chr3:85339359-85339378 MsG0380016578.01.T01:CDS 65.0%
CTCACCTTGGGGGTGATGCC+TGG - Chr3:85335495-85335514 MsG0380016578.01.T01:intron 65.0%
CTGGTAGAGCGGTGGTCGTC+TGG - Chr3:85335514-85335533 MsG0380016578.01.T01:intron 65.0%
GCTGCTCTCTCCCCCAGACT+AGG - Chr3:85336699-85336718 MsG0380016578.01.T01:intron 65.0%
GCTTCCGTTCCTGGACCAGC+GGG + Chr3:85338306-85338325 None:intergenic 65.0%
GGCTTCCGTTCCTGGACCAG+CGG + Chr3:85338307-85338326 None:intergenic 65.0%
GGGGGTGATGCCTGGTAGAG+CGG - Chr3:85335503-85335522 MsG0380016578.01.T01:intron 65.0%
GGTAGGGGTGGCTTCTTGGG+GGG + Chr3:85338630-85338649 None:intergenic 65.0%
GGTGATGCCTGGTAGAGCGG+TGG - Chr3:85335506-85335525 MsG0380016578.01.T01:intron 65.0%
!! CCGAGATGGTGGACAAGGCC+AGG - Chr3:85334844-85334863 MsG0380016578.01.T01:three_prime_UTR 65.0%
GCCCACATCGATGCCGCGGT+TGG + Chr3:85334924-85334943 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 85334825 85339772 85334825 ID=MsG0380016578.01;Name=MsG0380016578.01
Chr3 mRNA 85334825 85339772 85334825 ID=MsG0380016578.01.T01;Parent=MsG0380016578.01;Name=MsG0380016578.01.T01;_AED=0.43;_eAED=0.55;_QI=0|0.75|0.6|1|0.5|0.6|5|221|429
Chr3 exon 85334825 85335089 85334825 ID=MsG0380016578.01.T01:exon:33644;Parent=MsG0380016578.01.T01
Chr3 exon 85335191 85335371 85335191 ID=MsG0380016578.01.T01:exon:33643;Parent=MsG0380016578.01.T01
Chr3 exon 85337110 85337203 85337110 ID=MsG0380016578.01.T01:exon:33642;Parent=MsG0380016578.01.T01
Chr3 exon 85337314 85337592 85337314 ID=MsG0380016578.01.T01:exon:33641;Parent=MsG0380016578.01.T01
Chr3 exon 85339081 85339772 85339081 ID=MsG0380016578.01.T01:exon:33640;Parent=MsG0380016578.01.T01
Chr3 CDS 85339081 85339772 85339081 ID=MsG0380016578.01.T01:cds;Parent=MsG0380016578.01.T01
Chr3 CDS 85337314 85337592 85337314 ID=MsG0380016578.01.T01:cds;Parent=MsG0380016578.01.T01
Chr3 CDS 85337110 85337203 85337110 ID=MsG0380016578.01.T01:cds;Parent=MsG0380016578.01.T01
Chr3 CDS 85335191 85335371 85335191 ID=MsG0380016578.01.T01:cds;Parent=MsG0380016578.01.T01
Chr3 CDS 85335046 85335089 85335046 ID=MsG0380016578.01.T01:cds;Parent=MsG0380016578.01.T01
Chr3 three_prime_UTR 85334825 85335045 85334825 ID=MsG0380016578.01.T01:three_prime_utr;Parent=MsG0380016578.01.T01
Gene Sequence

>MsG0380016578.01.T01

ATGACACGAGCGGAGAAGACCGAGATGGTGGACAAGGCCAGGAGTGCCATTGTCTTGTGCCTCGGAGATAAAGTTTTGAGAGAAGTAGCAAAGGAACCAACCGCGGCATCGATGTGGGCAAAGATGGAATCTTTGTATATGACAAAGTCTTTGGCTCATCGGCAATTCCTAAAGCAACAACTCTACTCATTCAAGATGGTGGAGTCAAAGGCCATCATGGAGCAACTTACGGAGTTCAACAAAATCCTTGATGACTTGGAGAATATTGAGGTGAATCTTGAGGATGAAGATAAAGCTATACTCTTGTTGTGTGCTCTACCTAGATCTTTTGAATCGTTTAAAGATACCATGCTCTATGGAAAAGAAGGCACTGTTACCTTGGAAGAAGTTCAAGCAGCTTTGAGAACCAAGGAGTTGACTAAGTCGAAGGACTTGAGAGTTGATGAAAACGGGGAAGGCCTAAGTGTTTCAAGAGGGAATGGTGGAGGTAGAGGTAACCGAGGAAAGAGTAGTAACAAGACAAAGTTTAAATGCTTTAAGTGTAACAAGATGGGTCACTTCAAGAAGGATTGTCCGGAGATTAATGGTAATTCCGTACAAATTGTCTCTGAGGGTTATGAGGATGCAGGTGCTTTGATGGTGTGCTGTTTGGAGGATGAAGGTGATGTTTCTCACCTTGGGGGTGATGCCTGTTGCCAGAATAACTCAAAGAAAAGTGATTCCTTGAAATTATGCTGTCAGTATGCCACAACCATTCATTTATTGTCATGGTCTTCTGGTACACTTTCATTAATCTTTGTAATAATTTTGACATTTAAGGTGCAATTTTCTTTGCTAAGCATGGGGGAAGATCAATTAGAGATCAAGAGTATTTGTGATTCTCTGGGTATTCGCGTAATTGCTTATAGTCCTCTAGGACTTGGAATGCTTACTGGGAAATACTCAGCATCCAAACTTCCAACTGGACCAAGGGGATTGCTATTTAAGCAAATACTTCCAGGACTGGATCCTTTATTGAGTTCCCTGAGAGATATTGCAAATAAAAGACGCAAAACCATGTCACAGGTTGCAATAAATTGGTGCATATGCAAAGGTACAATTCCAATTCCTGGAGTCAAGTCAATAACACAAGCAGAGGAAAATTTGGGTGCTCTGGGTTGGCGTCTCTCCTCAAACGAGCTACTTCAGTTGGAGGATGCAGCACAGCAATCGCCTCGCAGGATGATCCAAAATATTTTTCAACCAGATGATATCAGCAACAAAGCCCCAGCAGCTCAAGTTGCAGACTGA

Protein sequence

>MsG0380016578.01.T01

MTRAEKTEMVDKARSAIVLCLGDKVLREVAKEPTAASMWAKMESLYMTKSLAHRQFLKQQLYSFKMVESKAIMEQLTEFNKILDDLENIEVNLEDEDKAILLLCALPRSFESFKDTMLYGKEGTVTLEEVQAALRTKELTKSKDLRVDENGEGLSVSRGNGGGRGNRGKSSNKTKFKCFKCNKMGHFKKDCPEINGNSVQIVSEGYEDAGALMVCCLEDEGDVSHLGGDACCQNNSKKSDSLKLCCQYATTIHLLSWSSGTLSLIFVIILTFKVQFSLLSMGEDQLEIKSICDSLGIRVIAYSPLGLGMLTGKYSASKLPTGPRGLLFKQILPGLDPLLSSLRDIANKRRKTMSQVAINWCICKGTIPIPGVKSITQAEENLGALGWRLSSNELLQLEDAAQQSPRRMIQNIFQPDDISNKAPAAQVAD*