Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048993.01.T01 | XP_003594689.1 | 91.827 | 208 | 11 | 1 | 9 | 210 | 87 | 294 | 1.32E-130 | 379 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048993.01.T01 | Q3JEJ6 | 36.029 | 136 | 87 | 0 | 55 | 190 | 1 | 136 | 2.36E-25 | 99.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048993.01.T01 | A2Q664 | 91.827 | 208 | 11 | 1 | 9 | 210 | 87 | 294 | 6.30e-131 | 379 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048085.01 | MsG0080048993.01 | 0.805239 | 1.469058e-49 | 7.732469e-47 |
| MsG0080048528.01 | MsG0080048993.01 | 0.821883 | 3.185200e-53 | 2.624247e-50 |
| MsG0080048820.01 | MsG0080048993.01 | 0.821890 | 3.173451e-53 | 2.615055e-50 |
| MsG0080048887.01 | MsG0080048993.01 | 0.800377 | 1.483231e-48 | 6.895829e-46 |
| MsG0080048900.01 | MsG0080048993.01 | 0.821862 | 3.221751e-53 | 2.652788e-50 |
| MsG0080048918.01 | MsG0080048993.01 | 0.810803 | 9.613128e-51 | 5.851393e-48 |
| MsG0080048987.01 | MsG0080048993.01 | 0.846334 | 2.318623e-59 | 3.977200e-56 |
| MsG0080048993.01 | MsG0080049004.01 | 0.803074 | 4.146293e-49 | 2.064109e-46 |
| MsG0080048993.01 | MsG0080049024.01 | 0.822726 | 2.030276e-53 | 1.713391e-50 |
| MsG0080048993.01 | MsG0080049070.01 | 0.834057 | 3.735321e-56 | 4.382266e-53 |
| MsG0080048993.01 | MsG0180000040.01 | 0.821533 | 3.837944e-53 | 3.130635e-50 |
| MsG0080048993.01 | MsG0180000113.01 | 0.827913 | 1.202945e-54 | 1.177510e-51 |
| MsG0080048993.01 | MsG0180000489.01 | 0.833582 | 4.910748e-56 | 5.679532e-53 |
| MsG0080048993.01 | MsG0180000490.01 | 0.850174 | 2.013292e-60 | 3.909782e-57 |
| MsG0080048993.01 | MsG0180000491.01 | 0.850176 | 2.011657e-60 | 3.906778e-57 |
| MsG0080048993.01 | MsG0180000676.01 | 0.835445 | 1.670896e-56 | 2.043677e-53 |
| MsG0080048993.01 | MsG0180000792.01 | 0.801685 | 8.012385e-49 | 3.850252e-46 |
| MsG0080048993.01 | MsG0180000793.01 | 0.841925 | 3.535954e-58 | 5.275036e-55 |
| MsG0080048993.01 | MsG0180000833.01 | 0.855083 | 8.000696e-62 | 1.825352e-58 |
| MsG0080048993.01 | MsG0180000834.01 | 0.847102 | 1.430298e-59 | 2.515296e-56 |
| MsG0080048993.01 | MsG0180000843.01 | 0.800196 | 1.614155e-48 | 7.469787e-46 |
| MsG0080048993.01 | MsG0180000942.01 | 0.800091 | 1.695554e-48 | 7.825753e-46 |
| MsG0080048993.01 | MsG0180000976.01 | 0.811294 | 7.523233e-51 | 4.639003e-48 |
| MsG0080048993.01 | MsG0180001138.01 | 0.896045 | 5.376216e-76 | 5.716944e-72 |
| MsG0080048993.01 | MsG0180001548.01 | 0.816731 | 4.754286e-52 | 3.395853e-49 |
| MsG0080048993.01 | MsG0180001609.01 | 0.836639 | 8.316047e-57 | 1.054228e-53 |
| MsG0080048993.01 | MsG0180001864.01 | 0.810243 | 1.269956e-50 | 7.615895e-48 |
| MsG0080048993.01 | MsG0180001929.01 | 0.844967 | 5.445708e-59 | 8.939695e-56 |
| MsG0080048993.01 | MsG0180002700.01 | 0.814220 | 1.721644e-51 | 1.148354e-48 |
| MsG0080048993.01 | MsG0180003196.01 | 0.877817 | 4.635641e-69 | 2.363920e-65 |
| MsG0080048993.01 | MsG0180003316.01 | 0.806865 | 6.683640e-50 | 3.667779e-47 |
| MsG0080048993.01 | MsG0180003325.01 | 0.809994 | 1.437243e-50 | 8.563634e-48 |
| MsG0080048993.01 | MsG0180003405.01 | 0.809561 | 1.780323e-50 | 1.048728e-47 |
| MsG0080048993.01 | MsG0180003547.01 | 0.843506 | 1.343433e-58 | 2.106501e-55 |
| MsG0080048993.01 | MsG0180003617.01 | 0.853815 | 1.861782e-61 | 4.073765e-58 |
| MsG0080048993.01 | MsG0180003986.01 | 0.818881 | 1.555196e-52 | 1.178489e-49 |
| MsG0080048993.01 | MsG0180004662.01 | 0.831725 | 1.418058e-55 | 1.552266e-52 |
| MsG0080048993.01 | MsG0180004714.01 | 0.838511 | 2.753961e-57 | 3.696851e-54 |
| MsG0080048993.01 | MsG0180004736.01 | 0.816876 | 4.411036e-52 | 3.163448e-49 |
| MsG0080048993.01 | MsG0180004787.01 | 0.823877 | 1.093490e-53 | 9.533211e-51 |
| MsG0080048993.01 | MsG0180004792.01 | 0.844525 | 7.164645e-59 | 1.159873e-55 |
| MsG0080048993.01 | MsG0180005184.01 | 0.818856 | 1.575308e-52 | 1.192953e-49 |
| MsG0080048993.01 | MsG0180005276.01 | 0.847065 | 1.463643e-59 | 2.570698e-56 |
| MsG0080048993.01 | MsG0180005416.01 | 0.808187 | 3.502378e-50 | 1.989516e-47 |
| MsG0080048993.01 | MsG0180005666.01 | 0.819069 | 1.409677e-52 | 1.073725e-49 |
| MsG0080048993.01 | MsG0180005820.01 | 0.801127 | 1.042559e-48 | 4.940161e-46 |
| MsG0080048993.01 | MsG0180006028.01 | 0.814499 | 1.493354e-51 | 1.003753e-48 |
| MsG0080048993.01 | MsG0180006136.01 | 0.832439 | 9.447717e-56 | 1.056025e-52 |
| MsG0080048993.01 | MsG0180006176.01 | 0.857921 | 1.173962e-62 | 2.945041e-59 |
| MsG0080048993.01 | MsG0180006177.01 | 0.847792 | 9.242831e-60 | 1.661391e-56 |
| MsG0080048993.01 | MsG0180006217.01 | 0.898524 | 4.877680e-77 | 5.787052e-73 |
| MsG0080048993.01 | MsG0280006400.01 | 0.856406 | 3.287140e-62 | 7.837877e-59 |
| MsG0080048993.01 | MsG0280006571.01 | 0.876318 | 1.536223e-68 | 7.414373e-65 |
| MsG0080048993.01 | MsG0280006718.01 | 0.810128 | 1.344449e-50 | 8.038491e-48 |
| MsG0080048993.01 | MsG0280006825.01 | 0.801162 | 1.025691e-48 | 4.864427e-46 |
| MsG0080048993.01 | MsG0280007079.01 | 0.804905 | 1.726295e-49 | 9.009508e-47 |
| MsG0080048993.01 | MsG0280007248.01 | 0.817725 | 2.840684e-52 | 2.085194e-49 |
| MsG0080048993.01 | MsG0280007511.01 | 0.829787 | 4.233378e-55 | 4.377808e-52 |
| MsG0080048993.01 | MsG0280007800.01 | 0.801129 | 1.041632e-48 | 4.936005e-46 |
| MsG0080048993.01 | MsG0280007852.01 | 0.821399 | 4.122285e-53 | 3.350036e-50 |
| MsG0080048993.01 | MsG0280007853.01 | 0.829490 | 4.999214e-55 | 5.124275e-52 |
| MsG0080048993.01 | MsG0280008223.01 | 0.817500 | 3.193381e-52 | 2.329604e-49 |
| MsG0080048993.01 | MsG0280008922.01 | 0.823500 | 1.339651e-53 | 1.155559e-50 |
| MsG0080048993.01 | MsG0280009287.01 | 0.813434 | 2.564266e-51 | 1.674458e-48 |
| MsG0080048993.01 | MsG0280009435.01 | 0.805313 | 1.417583e-49 | 7.475809e-47 |
| MsG0080048993.01 | MsG0280009436.01 | 0.806275 | 8.902721e-50 | 4.812319e-47 |
| MsG0080048993.01 | MsG0280009445.01 | 0.847860 | 8.849021e-60 | 1.594132e-56 |
| MsG0080048993.01 | MsG0280009675.01 | 0.861279 | 1.147373e-63 | 3.229305e-60 |
| MsG0080048993.01 | MsG0280010605.01 | 0.804599 | 1.999787e-49 | 1.035360e-46 |
| MsG0080048993.01 | MsG0280011180.01 | 0.819374 | 1.201049e-52 | 9.225205e-50 |
| MsG0080048993.01 | MsG0280011218.01 | 0.870845 | 1.072553e-66 | 4.234204e-63 |
| MsG0080048993.01 | MsG0280011362.01 | 0.804738 | 1.870408e-49 | 9.719615e-47 |
| MsG0080048993.01 | MsG0380011632.01 | 0.835798 | 1.360451e-56 | 1.681613e-53 |
| MsG0080048993.01 | MsG0380012782.01 | 0.828274 | 9.847879e-55 | 9.741533e-52 |
| MsG0080048993.01 | MsG0380012804.01 | 0.833012 | 6.808784e-56 | 7.742213e-53 |
| MsG0080048993.01 | MsG0380013022.01 | 0.843607 | 1.263154e-58 | 1.986907e-55 |
| MsG0080048993.01 | MsG0380014331.01 | 0.800559 | 1.361693e-48 | 6.359866e-46 |
| MsG0080048993.01 | MsG0380014470.01 | 0.807345 | 5.289669e-50 | 2.939136e-47 |
| MsG0080048993.01 | MsG0380015744.01 | 0.830285 | 3.200075e-55 | 3.356615e-52 |
| MsG0080048993.01 | MsG0380016057.01 | 0.813417 | 2.587197e-51 | 1.688602e-48 |
| MsG0080048993.01 | MsG0380016058.01 | 0.845311 | 4.395558e-59 | 7.295515e-56 |
| MsG0080048993.01 | MsG0380016166.01 | 0.800435 | 1.443310e-48 | 6.720018e-46 |
| MsG0080048993.01 | MsG0380016167.01 | 0.849449 | 3.210451e-60 | 6.088064e-57 |
| MsG0080048993.01 | MsG0380016172.01 | 0.822512 | 2.276448e-53 | 1.909535e-50 |
| MsG0080048993.01 | MsG0380016395.01 | 0.818524 | 1.874000e-52 | 1.406130e-49 |
| MsG0080048993.01 | MsG0380016699.01 | 0.814579 | 1.434137e-51 | 9.659488e-49 |
| MsG0080048993.01 | MsG0380016861.01 | 0.830095 | 3.561371e-55 | 3.714950e-52 |
| MsG0080048993.01 | MsG0380016870.01 | 0.804243 | 2.372129e-49 | 1.216887e-46 |
| MsG0080048993.01 | MsG0380016997.01 | 0.838413 | 2.919463e-57 | 3.907298e-54 |
| MsG0080048993.01 | MsG0380017162.01 | 0.844709 | 6.390183e-59 | 1.040477e-55 |
| MsG0080048993.01 | MsG0380017436.01 | 0.805066 | 1.597224e-49 | 8.369924e-47 |
| MsG0080048993.01 | MsG0380017532.01 | 0.805594 | 1.237912e-49 | 6.575489e-47 |
| MsG0080048993.01 | MsG0380018061.01 | 0.804660 | 1.941359e-49 | 1.006728e-46 |
| MsG0080048993.01 | MsG0480018337.01 | 0.831911 | 1.275861e-55 | 1.404256e-52 |
| MsG0080048993.01 | MsG0480018338.01 | 0.840912 | 6.533251e-58 | 9.444221e-55 |
| MsG0080048993.01 | MsG0480018592.01 | 0.812853 | 3.439076e-51 | 2.210539e-48 |
| MsG0080048993.01 | MsG0480018676.01 | 0.813996 | 1.929163e-51 | 1.278981e-48 |
| MsG0080048993.01 | MsG0480018997.01 | 0.889557 | 2.178023e-73 | 1.765973e-69 |
| MsG0080048993.01 | MsG0480019692.01 | 0.822078 | 2.871743e-53 | 2.378921e-50 |
| MsG0080048993.01 | MsG0480020473.01 | 0.857093 | 2.064179e-62 | 5.035690e-59 |
| MsG0080048993.01 | MsG0480020501.01 | 0.813318 | 2.719599e-51 | 1.770209e-48 |
| MsG0080048993.01 | MsG0480021059.01 | 0.869539 | 2.870991e-66 | 1.081467e-62 |
| MsG0080048993.01 | MsG0480021168.01 | 0.803718 | 3.050143e-49 | 1.543786e-46 |
| MsG0080048993.01 | MsG0480021213.01 | 0.861043 | 1.353129e-63 | 3.776434e-60 |
| MsG0080048993.01 | MsG0480021248.01 | 0.802789 | 4.747671e-49 | 2.346654e-46 |
| MsG0080048993.01 | MsG0480021312.01 | 0.813952 | 1.972455e-51 | 1.306145e-48 |
| MsG0080048993.01 | MsG0480021497.01 | 0.838503 | 2.766766e-57 | 3.713013e-54 |
| MsG0080048993.01 | MsG0480021777.01 | 0.812389 | 4.344323e-51 | 2.758716e-48 |
| MsG0080048993.01 | MsG0480021783.01 | 0.807003 | 6.249845e-50 | 3.441878e-47 |
| MsG0080048993.01 | MsG0480021795.01 | 0.805567 | 1.254174e-49 | 6.657096e-47 |
| MsG0080048993.01 | MsG0480021875.01 | 0.834061 | 3.727191e-56 | 4.373248e-53 |
| MsG0080048993.01 | MsG0480021967.01 | 0.847823 | 9.063698e-60 | 1.630878e-56 |
| MsG0080048993.01 | MsG0480022088.01 | 0.850080 | 2.139336e-60 | 4.141843e-57 |
| MsG0080048993.01 | MsG0480022162.01 | 0.822372 | 2.454486e-53 | 2.050684e-50 |
| MsG0080048993.01 | MsG0480022622.01 | 0.827058 | 1.929293e-54 | 1.841950e-51 |
| MsG0080048993.01 | MsG0480022805.01 | 0.800405 | 1.463485e-48 | 6.808870e-46 |
| MsG0080048993.01 | MsG0480023148.01 | 0.845918 | 3.009650e-59 | 5.094145e-56 |
| MsG0080048993.01 | MsG0480023166.01 | 0.802979 | 4.338697e-49 | 2.154687e-46 |
| MsG0080048993.01 | MsG0480023444.01 | 0.806052 | 9.920885e-50 | 5.332085e-47 |
| MsG0080048993.01 | MsG0480023452.01 | 0.822826 | 1.924174e-53 | 1.628505e-50 |
| MsG0080048993.01 | MsG0480023466.01 | 0.828209 | 1.021090e-54 | 1.008212e-51 |
| MsG0080048993.01 | MsG0480023483.01 | 0.814240 | 1.704112e-51 | 1.137335e-48 |
| MsG0080048993.01 | MsG0480023495.01 | 0.855447 | 6.271862e-62 | 1.448487e-58 |
| MsG0080048993.01 | MsG0480023616.01 | 0.808927 | 2.435081e-50 | 1.410247e-47 |
| MsG0080048993.01 | MsG0480023703.01 | 0.806000 | 1.017031e-49 | 5.459156e-47 |
| MsG0080048993.01 | MsG0480023704.01 | 0.811846 | 5.708560e-51 | 3.571830e-48 |
| MsG0080048993.01 | MsG0480023821.01 | 0.849870 | 2.449804e-60 | 4.710166e-57 |
| MsG0080048993.01 | MsG0480023845.01 | 0.812670 | 3.772661e-51 | 2.413429e-48 |
| MsG0080048993.01 | MsG0580024285.01 | 0.824387 | 8.299315e-54 | 7.340027e-51 |
| MsG0080048993.01 | MsG0580024487.01 | 0.818626 | 1.777015e-52 | 1.337012e-49 |
| MsG0080048993.01 | MsG0580025252.01 | 0.825476 | 4.591155e-54 | 4.189089e-51 |
| MsG0080048993.01 | MsG0580025845.01 | 0.818456 | 1.941718e-52 | 1.454310e-49 |
| MsG0080048993.01 | MsG0580025859.01 | 0.807483 | 4.943637e-50 | 2.756838e-47 |
| MsG0080048993.01 | MsG0580026050.01 | 0.809256 | 2.070391e-50 | 1.209700e-47 |
| MsG0080048993.01 | MsG0580026291.01 | 0.822208 | 2.678134e-53 | 2.226936e-50 |
| MsG0080048993.01 | MsG0580027082.01 | 0.804845 | 1.776606e-49 | 9.257488e-47 |
| MsG0080048993.01 | MsG0580028073.01 | 0.805889 | 1.073293e-49 | 5.744595e-47 |
| MsG0080048993.01 | MsG0580028495.01 | 0.816775 | 4.648094e-52 | 3.324040e-49 |
| MsG0080048993.01 | MsG0580029605.01 | 0.810152 | 1.328858e-50 | 7.950118e-48 |
| MsG0080048993.01 | MsG0580029751.01 | 0.803204 | 3.897287e-49 | 1.946720e-46 |
| MsG0080048993.01 | MsG0580029862.01 | 0.860886 | 1.511175e-63 | 4.194725e-60 |
| MsG0080048993.01 | MsG0580029967.01 | 0.800259 | 1.567690e-48 | 7.266399e-46 |
| MsG0080048993.01 | MsG0580030063.01 | 0.803057 | 4.180036e-49 | 2.080028e-46 |
| MsG0080048993.01 | MsG0680030286.01 | 0.804198 | 2.424249e-49 | 1.242218e-46 |
| MsG0080048993.01 | MsG0680030516.01 | 0.813111 | 3.019268e-51 | 1.954076e-48 |
| MsG0080048993.01 | MsG0680030902.01 | 0.826889 | 2.117686e-54 | 2.011875e-51 |
| MsG0080048993.01 | MsG0680031449.01 | 0.827962 | 1.170652e-54 | 1.147614e-51 |
| MsG0080048993.01 | MsG0680031826.01 | 0.821803 | 3.325000e-53 | 2.733100e-50 |
| MsG0080048993.01 | MsG0680031829.01 | 0.827064 | 1.922612e-54 | 1.835925e-51 |
| MsG0080048993.01 | MsG0680032006.01 | 0.800077 | 1.707172e-48 | 7.876499e-46 |
| MsG0080048993.01 | MsG0680032160.01 | 0.825927 | 3.589278e-54 | 3.317643e-51 |
| MsG0080048993.01 | MsG0680032245.01 | 0.828328 | 9.557281e-55 | 9.468732e-52 |
| MsG0080048993.01 | MsG0680032769.01 | 0.856477 | 3.133505e-62 | 7.489515e-59 |
| MsG0080048993.01 | MsG0680032850.01 | 0.802430 | 5.632265e-49 | 2.758478e-46 |
| MsG0080048993.01 | MsG0680035532.01 | 0.811483 | 6.845617e-51 | 4.242592e-48 |
| MsG0080048993.01 | MsG0680035664.01 | 0.827190 | 1.794313e-54 | 1.719805e-51 |
| MsG0080048993.01 | MsG0680035665.01 | 0.821273 | 4.408387e-53 | 3.569833e-50 |
| MsG0080048993.01 | MsG0780037184.01 | 0.811290 | 7.537918e-51 | 4.647620e-48 |
| MsG0080048993.01 | MsG0780038539.01 | 0.821790 | 3.348509e-53 | 2.751406e-50 |
| MsG0080048993.01 | MsG0780039230.01 | 0.827955 | 1.175154e-54 | 1.151761e-51 |
| MsG0080048993.01 | MsG0780039795.01 | 0.812012 | 5.251862e-51 | 3.300904e-48 |
| MsG0080048993.01 | MsG0780039805.01 | 0.810041 | 1.403534e-50 | 8.373230e-48 |
| MsG0080048993.01 | MsG0780039876.01 | 0.822352 | 2.480333e-53 | 2.071049e-50 |
| MsG0080048993.01 | MsG0780039955.01 | 0.827024 | 1.965770e-54 | 1.874917e-51 |
| MsG0080048993.01 | MsG0780039986.01 | 0.842593 | 2.351725e-58 | 3.583138e-55 |
| MsG0080048993.01 | MsG0780039988.01 | 0.837979 | 3.774675e-57 | 4.985978e-54 |
| MsG0080048993.01 | MsG0780040154.01 | 0.807934 | 3.965847e-50 | 2.237581e-47 |
| MsG0080048993.01 | MsG0780040155.01 | 0.809150 | 2.181119e-50 | 1.270827e-47 |
| MsG0080048993.01 | MsG0780040214.01 | 0.839212 | 1.813308e-57 | 2.486906e-54 |
| MsG0080048993.01 | MsG0780040236.01 | 0.833341 | 5.637233e-56 | 6.474016e-53 |
| MsG0080048993.01 | MsG0780040404.01 | 0.857167 | 1.962535e-62 | 4.799952e-59 |
| MsG0080048993.01 | MsG0780040484.01 | 0.829472 | 5.049709e-55 | 5.173255e-52 |
| MsG0080048993.01 | MsG0780040603.01 | 0.860888 | 1.508044e-63 | 4.186290e-60 |
| MsG0080048993.01 | MsG0780040640.01 | 0.831198 | 1.912531e-55 | 2.060629e-52 |
| MsG0080048993.01 | MsG0780040684.01 | 0.818416 | 1.982352e-52 | 1.483110e-49 |
| MsG0080048993.01 | MsG0780040965.01 | 0.890540 | 8.981892e-74 | 7.584887e-70 |
| MsG0080048993.01 | MsG0780041129.01 | 0.811028 | 8.593888e-51 | 5.262701e-48 |
| MsG0080048993.01 | MsG0780041174.01 | 0.805893 | 1.071463e-49 | 5.735278e-47 |
| MsG0080048993.01 | MsG0780041272.01 | 0.800070 | 1.712212e-48 | 7.898534e-46 |
| MsG0080048993.01 | MsG0780041331.01 | 0.855016 | 8.369567e-62 | 1.905290e-58 |
| MsG0080048993.01 | MsG0780041385.01 | 0.822992 | 1.759980e-53 | 1.496511e-50 |
| MsG0080048993.01 | MsG0780041442.01 | 0.895042 | 1.394763e-75 | 1.423080e-71 |
| MsG0080048993.01 | MsG0780041474.01 | 0.833360 | 5.578452e-56 | 6.409422e-53 |
| MsG0080048993.01 | MsG0780041778.01 | 0.812754 | 3.616327e-51 | 2.318475e-48 |
| MsG0080048993.01 | MsG0780041828.01 | 0.835631 | 1.499547e-56 | 1.844247e-53 |
| MsG0080048993.01 | MsG0880041847.01 | 0.862371 | 5.313043e-64 | 1.552446e-60 |
| MsG0080048993.01 | MsG0880041850.01 | 0.800053 | 1.725890e-48 | 7.958096e-46 |
| MsG0080048993.01 | MsG0880041931.01 | 0.834744 | 2.510198e-56 | 3.006013e-53 |
| MsG0080048993.01 | MsG0880042044.01 | 0.823380 | 1.429260e-53 | 1.228495e-50 |
| MsG0080048993.01 | MsG0880042415.01 | 0.825331 | 4.969078e-54 | 4.515634e-51 |
| MsG0080048993.01 | MsG0880043024.01 | 0.813374 | 2.643922e-51 | 1.723661e-48 |
| MsG0080048993.01 | MsG0880043056.01 | 0.809361 | 1.965763e-50 | 1.151838e-47 |
| MsG0080048993.01 | MsG0880043277.01 | 0.806026 | 1.004392e-49 | 5.394710e-47 |
| MsG0080048993.01 | MsG0880043278.01 | 0.806692 | 7.271167e-50 | 3.972180e-47 |
| MsG0080048993.01 | MsG0880043476.01 | 0.838874 | 2.218795e-57 | 3.011628e-54 |
| MsG0080048993.01 | MsG0880043497.01 | 0.806323 | 8.698784e-50 | 4.707630e-47 |
| MsG0080048993.01 | MsG0880044595.01 | 0.846732 | 1.805508e-59 | 3.137509e-56 |
| MsG0080048993.01 | MsG0880045224.01 | 0.828997 | 6.583688e-55 | 6.650884e-52 |
| MsG0080048993.01 | MsG0880045648.01 | 0.806653 | 7.409407e-50 | 4.043504e-47 |
| MsG0080048993.01 | MsG0880045662.01 | 0.805682 | 1.186213e-49 | 6.315534e-47 |
| MsG0080048993.01 | MsG0880045697.01 | 0.845470 | 3.981047e-59 | 6.641257e-56 |
| MsG0080048993.01 | MsG0880046054.01 | 0.826604 | 2.476930e-54 | 2.333757e-51 |
| MsG0080048993.01 | MsG0880046324.01 | 0.816125 | 6.495545e-52 | 4.563450e-49 |
| MsG0080048993.01 | MsG0880047111.01 | 0.814084 | 1.844324e-51 | 1.225696e-48 |
| MsG0080048993.01 | MsG0880047112.01 | 0.809390 | 1.937329e-50 | 1.136049e-47 |
| MsG0080048993.01 | MsG0880047207.01 | 0.837162 | 6.116318e-57 | 7.877614e-54 |
| MsG0080048993.01 | MsG0880047435.01 | 0.851907 | 6.536357e-61 | 1.342776e-57 |
| MsG0080048993.01 | MsG0880047540.01 | 0.821083 | 4.874932e-53 | 3.927339e-50 |
| MsG0080048993.01 | MsG0880047578.01 | 0.837243 | 5.832723e-57 | 7.530572e-54 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048993.01.T01 | MTR_2g033490 | 91.827 | 208 | 11 | 1 | 9 | 210 | 87 | 294 | 1.60e-134 | 379 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0080048993.01.T01 | AT3G17170 | 71.141 | 149 | 43 | 0 | 17 | 165 | 82 | 230 | 2.39e-77 | 235 |
Find 39 sgRNAs with CRISPR-Local
Find 90 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGAACTCGTTGATATATT+TGG | 0.137864 | contig595end:-12500 | MsG0080048993.01.T01:intergenic |
| TTTCTCATTGATATTCAATT+TGG | 0.139672 | contig595end:+11064 | MsG0080048993.01.T01:CDS |
| CAGTTTCCACGTCAAGCTTT+AGG | 0.189454 | contig595end:-11293 | MsG0080048993.01.T01:intergenic |
| CATTATAGACGATGATGATT+TGG | 0.314854 | contig595end:+12717 | MsG0080048993.01.T01:CDS |
| AGTTTCCACGTCAAGCTTTA+GGG | 0.316767 | contig595end:-11292 | MsG0080048993.01.T01:intergenic |
| GGGAGAAGAAAGGAAGAGTA+TGG | 0.343212 | contig595end:+12386 | MsG0080048993.01.T01:CDS |
| GCTTGACGTGGAAACTGATA+TGG | 0.365705 | contig595end:+11299 | MsG0080048993.01.T01:CDS |
| TTCTCATTGATATTCAATTT+GGG | 0.368200 | contig595end:+11065 | MsG0080048993.01.T01:CDS |
| CAACGAGTTCAAGACTTTGT+TGG | 0.383716 | contig595end:+12510 | MsG0080048993.01.T01:CDS |
| GGAAGATGGTAAACTTCTTC+CGG | 0.390554 | contig595end:+11120 | MsG0080048993.01.T01:CDS |
| CTTCGTCCCTCTTTATCACT+AGG | 0.396913 | contig595end:-12558 | MsG0080048993.01.T01:intergenic |
| AGTATGGAGATTCAGTGATT+GGG | 0.412799 | contig595end:+12402 | MsG0080048993.01.T01:CDS |
| GAGTATGGAGATTCAGTGAT+TGG | 0.428387 | contig595end:+12401 | MsG0080048993.01.T01:CDS |
| CAGAAGACAGTTGAGGAAGA+TGG | 0.433743 | contig595end:+11106 | MsG0080048993.01.T01:CDS |
| GCTGTTAATGAGAAAGTTCA+AGG | 0.436751 | contig595end:+11871 | MsG0080048993.01.T01:CDS |
| CACAGATGATGAAGAAGAAT+GGG | 0.451353 | contig595end:+12633 | MsG0080048993.01.T01:CDS |
| GATGATATTGAGGGCGGTGA+TGG | 0.471829 | contig595end:+12688 | MsG0080048993.01.T01:CDS |
| GTATTAAACTCGGGAGGAGG+AGG | 0.481879 | contig595end:-12598 | MsG0080048993.01.T01:intergenic |
| GCACAGATGATGAAGAAGAA+TGG | 0.500429 | contig595end:+12632 | MsG0080048993.01.T01:CDS |
| ATCTGATTATGATGATATTG+AGG | 0.526841 | contig595end:+12678 | MsG0080048993.01.T01:CDS |
| TTCGACACCTAGTGATAAAG+AGG | 0.527803 | contig595end:+12551 | MsG0080048993.01.T01:CDS |
| GATGATGAAGATGAGGAAGA+TGG | 0.536094 | contig595end:+12655 | MsG0080048993.01.T01:CDS |
| TCATCATCATCTTCAAACTC+CGG | 0.543493 | contig595end:-11139 | MsG0080048993.01.T01:intergenic |
| TCATGAGAAACATGCAGAAG+AGG | 0.554875 | contig595end:+11843 | MsG0080048993.01.T01:CDS |
| GTATGGAGATTCAGTGATTG+GGG | 0.567959 | contig595end:+12403 | MsG0080048993.01.T01:CDS |
| AAAGTATTAAACTCGGGAGG+AGG | 0.569590 | contig595end:-12601 | MsG0080048993.01.T01:intergenic |
| TCTGATTATGATGATATTGA+GGG | 0.573289 | contig595end:+12679 | MsG0080048993.01.T01:CDS |
| AGAATGGGATGATGAAGATG+AGG | 0.580334 | contig595end:+12648 | MsG0080048993.01.T01:CDS |
| AGCAACAAAAGTATTAAACT+CGG | 0.581584 | contig595end:-12608 | MsG0080048993.01.T01:intergenic |
| TGATTGGGGTATGAGAAAGT+TGG | 0.581664 | contig595end:+12417 | MsG0080048993.01.T01:CDS |
| TCAAGTAAACAATCTCATAG+TGG | 0.585631 | contig595end:-11819 | MsG0080048993.01.T01:intergenic |
| GCAACAAAAGTATTAAACTC+GGG | 0.611767 | contig595end:-12607 | MsG0080048993.01.T01:intergenic |
| TGATGATTTGGAAATATCAG+AGG | 0.612887 | contig595end:+12729 | MsG0080048993.01.T01:CDS |
| TATTAAACTCGGGAGGAGGA+GGG | 0.622797 | contig595end:-12597 | MsG0080048993.01.T01:intergenic |
| GATGATTTGGAAATATCAGA+GGG | 0.644533 | contig595end:+12730 | MsG0080048993.01.T01:CDS |
| TGAATCCCTAAAGCTTGACG+TGG | 0.671676 | contig595end:+11287 | MsG0080048993.01.T01:CDS |
| ACAAAAGTATTAAACTCGGG+AGG | 0.675886 | contig595end:-12604 | MsG0080048993.01.T01:intergenic |
| TCGACACCTAGTGATAAAGA+GGG | 0.685347 | contig595end:+12552 | MsG0080048993.01.T01:CDS |
| GATTATGATGATATTGAGGG+CGG | 0.728969 | contig595end:+12682 | MsG0080048993.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATCAAATAAAAATTATTAG+AGG | - | contig595end:11697-11716 | MsG0080048993.01.T01:intergenic | 10.0% |
| !!! | AAAATGAAAATTTGGAATAA+GGG | - | contig595end:11250-11269 | MsG0080048993.01.T01:intergenic | 15.0% |
| !!! | TCAAGTTAAAATGATTTTTT+TGG | - | contig595end:12284-12303 | MsG0080048993.01.T01:intergenic | 15.0% |
| !! | AATACAGAACAATAATGATT+TGG | - | contig595end:12057-12076 | MsG0080048993.01.T01:intergenic | 20.0% |
| !! | ATAGATTCGAAAAAAATGTA+AGG | - | contig595end:11921-11940 | MsG0080048993.01.T01:intergenic | 20.0% |
| !! | ATGTCACTATTGTTAAATAT+AGG | + | contig595end:12002-12021 | MsG0080048993.01.T01:intron | 20.0% |
| !! | TAAAAAAGAACCAGAATAAT+CGG | - | contig595end:12332-12351 | MsG0080048993.01.T01:intergenic | 20.0% |
| !! | TACTCTTTATTGTATATGTA+TGG | + | contig595end:11418-11437 | MsG0080048993.01.T01:intron | 20.0% |
| !! | TTCTCATTGATATTCAATTT+GGG | + | contig595end:11065-11084 | MsG0080048993.01.T01:CDS | 20.0% |
| !! | TTTCTCATTGATATTCAATT+TGG | + | contig595end:11064-11083 | MsG0080048993.01.T01:CDS | 20.0% |
| !! | TTTGTAAACATTATCTAACA+AGG | - | contig595end:11495-11514 | MsG0080048993.01.T01:intergenic | 20.0% |
| !!! | GAAAATGAAAATTTGGAATA+AGG | - | contig595end:11251-11270 | MsG0080048993.01.T01:intergenic | 20.0% |
| !!! | TCTGTTTGTTTTTGTTTTTT+TGG | + | contig595end:11187-11206 | MsG0080048993.01.T01:intron | 20.0% |
| !!! | TTGATGCAATTTTTATTCAT+AGG | + | contig595end:11384-11403 | MsG0080048993.01.T01:intron | 20.0% |
| ! | ACTAATGAACTCATTCTATT+TGG | - | contig595end:11960-11979 | MsG0080048993.01.T01:intergenic | 25.0% |
| ! | ATCTGATTATGATGATATTG+AGG | + | contig595end:12678-12697 | MsG0080048993.01.T01:CDS | 25.0% |
| ! | ATTATCGTCATTATGGTTTA+GGG | - | contig595end:11526-11545 | MsG0080048993.01.T01:intergenic | 25.0% |
| ! | TAAACATTATCTAACAAGGT+CGG | - | contig595end:11491-11510 | MsG0080048993.01.T01:intergenic | 25.0% |
| ! | TCTGATTATGATGATATTGA+GGG | + | contig595end:12679-12698 | MsG0080048993.01.T01:CDS | 25.0% |
| ! | TTTAATAATAACCTTTGCTG+TGG | + | contig595end:12193-12212 | MsG0080048993.01.T01:intron | 25.0% |
| !!! | AGCAACAAAAGTATTAAACT+CGG | - | contig595end:12611-12630 | MsG0080048993.01.T01:intergenic | 25.0% |
| AAACATACTTCCGATTATTC+TGG | + | contig595end:12319-12338 | MsG0080048993.01.T01:intron | 30.0% | |
| AATAATTGTATCCACAGCAA+AGG | - | contig595end:12207-12226 | MsG0080048993.01.T01:intergenic | 30.0% | |
| CACGTTACTGAATCTTTAAA+GGG | - | contig595end:11758-11777 | MsG0080048993.01.T01:intergenic | 30.0% | |
| CAGTAACATGACAAACTATT+TGG | + | contig595end:11461-11480 | MsG0080048993.01.T01:intron | 30.0% | |
| CATCTAGATTATCGTCATTA+TGG | - | contig595end:11533-11552 | MsG0080048993.01.T01:intergenic | 30.0% | |
| CATTATAGACGATGATGATT+TGG | + | contig595end:12717-12736 | MsG0080048993.01.T01:CDS | 30.0% | |
| CCTGTACGAAAATGAAAATT+TGG | - | contig595end:11258-11277 | MsG0080048993.01.T01:intergenic | 30.0% | |
| CTGGATTAATGTTATGACTT+TGG | + | contig595end:11224-11243 | MsG0080048993.01.T01:intron | 30.0% | |
| CTTGAACTCGTTGATATATT+TGG | - | contig595end:12503-12522 | MsG0080048993.01.T01:intergenic | 30.0% | |
| GATTATCGTCATTATGGTTT+AGG | - | contig595end:11527-11546 | MsG0080048993.01.T01:intergenic | 30.0% | |
| GGTTAATTGCAATCTTTGAA+AGG | - | contig595end:11900-11919 | MsG0080048993.01.T01:intergenic | 30.0% | |
| TCAAGTAAACAATCTCATAG+TGG | - | contig595end:11822-11841 | MsG0080048993.01.T01:intergenic | 30.0% | |
| TGTCAAAAGTTAGCAAAAGA+TGG | - | contig595end:11618-11637 | MsG0080048993.01.T01:intergenic | 30.0% | |
| ! | AAACATTTGCAGACTTTTTG+AGG | + | contig595end:12365-12384 | MsG0080048993.01.T01:intron | 30.0% |
| ! | AACATTTGCAGACTTTTTGA+GGG | + | contig595end:12366-12385 | MsG0080048993.01.T01:intron | 30.0% |
| ! | CCAAATTTTCATTTTCGTAC+AGG | + | contig595end:11255-11274 | MsG0080048993.01.T01:intron | 30.0% |
| ! | GATGATTTGGAAATATCAGA+GGG | + | contig595end:12730-12749 | MsG0080048993.01.T01:CDS | 30.0% |
| ! | TGATGATTTGGAAATATCAG+AGG | + | contig595end:12729-12748 | MsG0080048993.01.T01:CDS | 30.0% |
| ! | TTTGGTAGTCTAAATAGTTC+TGG | + | contig595end:11205-11224 | MsG0080048993.01.T01:intron | 30.0% |
| !! | GCAACAAAAGTATTAAACTC+GGG | - | contig595end:12610-12629 | MsG0080048993.01.T01:intergenic | 30.0% |
| AGTATGGAGATTCAGTGATT+GGG | + | contig595end:12402-12421 | MsG0080048993.01.T01:CDS | 35.0% | |
| CACAGATGATGAAGAAGAAT+GGG | + | contig595end:12633-12652 | MsG0080048993.01.T01:CDS | 35.0% | |
| GATTATGATGATATTGAGGG+CGG | + | contig595end:12682-12701 | MsG0080048993.01.T01:CDS | 35.0% | |
| GCACGTTACTGAATCTTTAA+AGG | - | contig595end:11759-11778 | MsG0080048993.01.T01:intergenic | 35.0% | |
| GCTGTTAATGAGAAAGTTCA+AGG | + | contig595end:11871-11890 | MsG0080048993.01.T01:CDS | 35.0% | |
| GTCATGAACAAATGACATAG+AGG | - | contig595end:11666-11685 | MsG0080048993.01.T01:intergenic | 35.0% | |
| TCAACTGTATTGCCAAATTG+TGG | - | contig595end:12143-12162 | MsG0080048993.01.T01:intergenic | 35.0% | |
| TCATCATCATCTTCAAACTC+CGG | - | contig595end:11142-11161 | MsG0080048993.01.T01:intergenic | 35.0% | |
| ! | TCATTTTCAGAAGACAGTTG+AGG | + | contig595end:11099-11118 | MsG0080048993.01.T01:CDS | 35.0% |
| !! | ACAAAAGTATTAAACTCGGG+AGG | - | contig595end:12607-12626 | MsG0080048993.01.T01:intergenic | 35.0% |
| !! | ATTAGTTTGCCATTTCCATC+TGG | + | contig595end:11974-11993 | MsG0080048993.01.T01:intron | 35.0% |
| !! | CATTTTGATGAACTTCGAGA+TGG | + | contig595end:12474-12493 | MsG0080048993.01.T01:CDS | 35.0% |
| AAGATGGATCTAAATCCACC+TGG | - | contig595end:11602-11621 | MsG0080048993.01.T01:intergenic | 40.0% | |
| ACATGAATGCCAGATGGAAA+TGG | - | contig595end:11986-12005 | MsG0080048993.01.T01:intergenic | 40.0% | |
| AGAATGGGATGATGAAGATG+AGG | + | contig595end:12648-12667 | MsG0080048993.01.T01:CDS | 40.0% | |
| AGTTTCCACGTCAAGCTTTA+GGG | - | contig595end:11295-11314 | MsG0080048993.01.T01:intergenic | 40.0% | |
| ATAGTGACATGAATGCCAGA+TGG | - | contig595end:11992-12011 | MsG0080048993.01.T01:intergenic | 40.0% | |
| ATGTTATAACCGTGCTCTCT+TGG | + | contig595end:11550-11569 | MsG0080048993.01.T01:intron | 40.0% | |
| CAACGAGTTCAAGACTTTGT+TGG | + | contig595end:12510-12529 | MsG0080048993.01.T01:CDS | 40.0% | |
| GAGTATGGAGATTCAGTGAT+TGG | + | contig595end:12401-12420 | MsG0080048993.01.T01:CDS | 40.0% | |
| GATGATGAAGATGAGGAAGA+TGG | + | contig595end:12655-12674 | MsG0080048993.01.T01:CDS | 40.0% | |
| GCACAGATGATGAAGAAGAA+TGG | + | contig595end:12632-12651 | MsG0080048993.01.T01:CDS | 40.0% | |
| GGAAGATGGTAAACTTCTTC+CGG | + | contig595end:11120-11139 | MsG0080048993.01.T01:CDS | 40.0% | |
| GTATGGAGATTCAGTGATTG+GGG | + | contig595end:12403-12422 | MsG0080048993.01.T01:CDS | 40.0% | |
| TCATGAGAAACATGCAGAAG+AGG | + | contig595end:11843-11862 | MsG0080048993.01.T01:CDS | 40.0% | |
| TCGACACCTAGTGATAAAGA+GGG | + | contig595end:12552-12571 | MsG0080048993.01.T01:CDS | 40.0% | |
| TGATTGGGGTATGAGAAAGT+TGG | + | contig595end:12417-12436 | MsG0080048993.01.T01:CDS | 40.0% | |
| TTCGACACCTAGTGATAAAG+AGG | + | contig595end:12551-12570 | MsG0080048993.01.T01:CDS | 40.0% | |
| ! | AAAGTATTAAACTCGGGAGG+AGG | - | contig595end:12604-12623 | MsG0080048993.01.T01:intergenic | 40.0% |
| ! | CACTGTTGCTTACCACAATT+TGG | + | contig595end:12128-12147 | MsG0080048993.01.T01:intron | 40.0% |
| !! | GACTTTTTGAGGGAGAAGAA+AGG | + | contig595end:12376-12395 | MsG0080048993.01.T01:intron | 40.0% |
| CAGAAGACAGTTGAGGAAGA+TGG | + | contig595end:11106-11125 | MsG0080048993.01.T01:CDS | 45.0% | |
| CAGTTTCCACGTCAAGCTTT+AGG | - | contig595end:11296-11315 | MsG0080048993.01.T01:intergenic | 45.0% | |
| CTTATCAGACATTCACCAGG+TGG | + | contig595end:11584-11603 | MsG0080048993.01.T01:intron | 45.0% | |
| CTTCGTCCCTCTTTATCACT+AGG | - | contig595end:12561-12580 | MsG0080048993.01.T01:intergenic | 45.0% | |
| GCTATAGTGTTATGCCGTAG+CGG | + | contig595end:12024-12043 | MsG0080048993.01.T01:intron | 45.0% | |
| GCTTGACGTGGAAACTGATA+TGG | + | contig595end:11299-11318 | MsG0080048993.01.T01:CDS | 45.0% | |
| GGGAGAAGAAAGGAAGAGTA+TGG | + | contig595end:12386-12405 | MsG0080048993.01.T01:CDS | 45.0% | |
| TATTAAACTCGGGAGGAGGA+GGG | - | contig595end:12600-12619 | MsG0080048993.01.T01:intergenic | 45.0% | |
| TGAATCCCTAAAGCTTGACG+TGG | + | contig595end:11287-11306 | MsG0080048993.01.T01:CDS | 45.0% | |
| ! | CATTATGGTTTAGGGCAGCA+TGG | - | contig595end:11518-11537 | MsG0080048993.01.T01:intergenic | 45.0% |
| ! | GATTTGGTCCAATTCCGCTA+CGG | - | contig595end:12041-12060 | MsG0080048993.01.T01:intergenic | 45.0% |
| ! | GGTCTTATCAGACATTCACC+AGG | + | contig595end:11581-11600 | MsG0080048993.01.T01:intron | 45.0% |
| GATGATATTGAGGGCGGTGA+TGG | + | contig595end:12688-12707 | MsG0080048993.01.T01:CDS | 50.0% | |
| GTATTAAACTCGGGAGGAGG+AGG | - | contig595end:12601-12620 | MsG0080048993.01.T01:intergenic | 50.0% | |
| ! | GTGTTATGCCGTAGCGGAAT+TGG | + | contig595end:12030-12049 | MsG0080048993.01.T01:intron | 50.0% |
| CCAGACTGTCCAAGAGAGCA+CGG | - | contig595end:11562-11581 | MsG0080048993.01.T01:intergenic | 55.0% | |
| CGTGCTCTCTTGGACAGTCT+GGG | + | contig595end:11560-11579 | MsG0080048993.01.T01:intron | 55.0% | |
| CCGTGCTCTCTTGGACAGTC+TGG | + | contig595end:11559-11578 | MsG0080048993.01.T01:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| contig595end | gene | 11058 | 12768 | 11058 | ID=MsG0080048993.01;Name=MsG0080048993.01 |
| contig595end | mRNA | 11058 | 12768 | 11058 | ID=MsG0080048993.01.T01;Parent=MsG0080048993.01;Name=MsG0080048993.01.T01;_AED=0.50;_eAED=0.54;_QI=0|0|0|1|1|1|4|0|210 |
| contig595end | exon | 11058 | 11163 | 11058 | ID=MsG0080048993.01.T01:exon:17771;Parent=MsG0080048993.01.T01 |
| contig595end | exon | 11277 | 11333 | 11277 | ID=MsG0080048993.01.T01:exon:17772;Parent=MsG0080048993.01.T01 |
| contig595end | exon | 11815 | 11892 | 11815 | ID=MsG0080048993.01.T01:exon:17773;Parent=MsG0080048993.01.T01 |
| contig595end | exon | 12377 | 12768 | 12377 | ID=MsG0080048993.01.T01:exon:17774;Parent=MsG0080048993.01.T01 |
| contig595end | CDS | 11058 | 11163 | 11058 | ID=MsG0080048993.01.T01:cds;Parent=MsG0080048993.01.T01 |
| contig595end | CDS | 11277 | 11333 | 11277 | ID=MsG0080048993.01.T01:cds;Parent=MsG0080048993.01.T01 |
| contig595end | CDS | 11815 | 11892 | 11815 | ID=MsG0080048993.01.T01:cds;Parent=MsG0080048993.01.T01 |
| contig595end | CDS | 12377 | 12768 | 12377 | ID=MsG0080048993.01.T01:cds;Parent=MsG0080048993.01.T01 |
| Gene Sequence |
| Protein sequence |
