AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280009431.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009431.01.T01 MTR_2g062700 91.369 336 23 3 1 336 1 330 0.0 601
MsG0280009431.01.T01 MTR_4g105140 33.229 319 190 7 22 332 19 322 9.20e-47 163
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009431.01.T01 AT5G44600 50.292 342 150 6 1 331 1 333 3.36e-108 319
MsG0280009431.01.T01 AT5G44590 50.442 339 146 4 17 333 1 339 2.89e-106 315
MsG0280009431.01.T01 AT5G44590 51.692 325 145 4 17 333 1 321 1.07e-105 313
MsG0280009431.01.T01 AT5G63100 34.641 306 172 9 38 329 30 321 3.04e-37 136

Find 80 sgRNAs with CRISPR-Local

Find 371 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGAAAAGCATTCTAGATTT+AGG 0.144489 2:-51829755 None:intergenic
TCCATCACTCCTGTGCTTAA+AGG 0.228397 2:-51834944 None:intergenic
AAAGGTCCCATTGCTATCTT+AGG 0.249398 2:+51831117 MsG0280009431.01.T01:CDS
GATAAAGCAAGAGATTATTT+TGG 0.264676 2:+51832133 MsG0280009431.01.T01:CDS
TGTTCATAGCATTCTTTATA+AGG 0.265082 2:+51829877 MsG0280009431.01.T01:CDS
GGAAAAGCATTCTAGATTTA+GGG 0.284395 2:-51829754 None:intergenic
GCAATATGTGGAAAACTAAA+TGG 0.302871 2:-51829518 None:intergenic
CGGCACTGCACCTGGAAGGC+TGG 0.306939 2:+51831426 MsG0280009431.01.T01:CDS
CATCAATCTCCCAGCCTTCC+AGG 0.318386 2:-51831436 None:intergenic
TTTGTATGAGGTGTTAATTA+TGG 0.320358 2:-51835128 None:intergenic
AAGATAGCAATGGGACCTTT+TGG 0.339083 2:-51831114 None:intergenic
TTGGAGAGAATGGACGATTA+TGG 0.346605 2:-51829610 None:intergenic
CTTTACCTGATCTGAAATCT+TGG 0.368075 2:+51834903 MsG0280009431.01.T01:CDS
TCCCATTGCTATCTTAGGTT+TGG 0.373072 2:+51831122 MsG0280009431.01.T01:CDS
GTGAACTGCGGCGGGATCGA+TGG 0.374002 2:+51833868 MsG0280009431.01.T01:CDS
GGCATTCTAAATGTTCATAT+TGG 0.376481 2:+51832190 MsG0280009431.01.T01:CDS
TTGTATGAGGTGTTAATTAT+GGG 0.386588 2:-51835127 None:intergenic
TACTTGTCCAGGAAATGCTT+TGG 0.390656 2:-51833968 None:intergenic
TGAACTGCGGCGGGATCGAT+GGG 0.399386 2:+51833869 MsG0280009431.01.T01:CDS
GCATTATCCAAAGCATTTCC+TGG 0.417765 2:+51833961 MsG0280009431.01.T01:CDS
TGAAGTGAAGTTGGAGAGAA+TGG 0.425010 2:-51829620 None:intergenic
GCAGACCAAGATTTCAGATC+AGG 0.433959 2:-51834908 None:intergenic
GGAATTACATGATAGATTGA+TGG 0.439351 2:+51833828 MsG0280009431.01.T01:CDS
GGCACTGCACCTGGAAGGCT+GGG 0.439803 2:+51831427 MsG0280009431.01.T01:CDS
CAGCCTTCCAGGTGCAGTGC+CGG 0.443222 2:-51831425 None:intergenic
GAATGGACGATTATGGATAG+AGG 0.443558 2:-51829603 None:intergenic
TGTTGGGAATGAAGTGAAGT+TGG 0.448235 2:-51829629 None:intergenic
AAATTCTCACCCGTTTCCTT+CGG 0.454918 2:-51834863 None:intergenic
TGGAACAATGGCTGGCAAGC+TGG 0.461883 2:-51831094 None:intergenic
CCTCTCATTGTTGCTTCAAA+CGG 0.463194 2:-51829479 None:intergenic
GAAGAGAATGCCGAAGGAAA+CGG 0.466469 2:+51834853 MsG0280009431.01.T01:CDS
AAGAGAATGCCGAAGGAAAC+GGG 0.472026 2:+51834854 MsG0280009431.01.T01:CDS
AAATAGATGCTTACTTGTCC+AGG 0.475731 2:-51833979 None:intergenic
AAAAGTGGACTAATTCCTGC+TGG 0.478344 2:+51829903 MsG0280009431.01.T01:CDS
ACCAAACCTAAGATAGCAAT+GGG 0.480667 2:-51831123 None:intergenic
TCCTTTAAGCACAGGAGTGA+TGG 0.481104 2:+51834943 MsG0280009431.01.T01:CDS
CTGCGGCGGGATCGATGGGG+TGG 0.485766 2:+51833873 MsG0280009431.01.T01:CDS
CTGACAGGTTAGTACTTGGT+TGG 0.487497 2:+51833807 MsG0280009431.01.T01:intron
ATTGTGGCCGGCACTGCACC+TGG 0.492126 2:+51831418 MsG0280009431.01.T01:CDS
ATGATGTGGCTGTTGATGTT+GGG 0.494626 2:-51829645 None:intergenic
ACTCCTGTGCTTAAAGGAGA+TGG 0.500537 2:-51834938 None:intergenic
TTGCCAGCCATTGTTCCAAA+AGG 0.502411 2:+51831099 MsG0280009431.01.T01:CDS
TTGTCTGACAGGTTAGTACT+TGG 0.503970 2:+51833803 MsG0280009431.01.T01:intron
TAAGCACAGGAGTGATGGAT+TGG 0.505919 2:+51834948 MsG0280009431.01.T01:CDS
CGATGCCTTCATTCCATCAG+AGG 0.506931 2:+51832213 MsG0280009431.01.T01:CDS
TTATGGATAGAGGAGAGTAT+TGG 0.509901 2:-51829593 None:intergenic
TCTTCTTCTTGATCATGATG+TGG 0.511161 2:-51829659 None:intergenic
CTTCTGTGCAAATCCTCTGA+TGG 0.515688 2:-51832226 None:intergenic
CATGATGTGGCTGTTGATGT+TGG 0.521975 2:-51829646 None:intergenic
CTCATCTGATGCTTGAATTG+TGG 0.526429 2:+51831402 MsG0280009431.01.T01:CDS
GGCGGGATCGATGGGGTGGA+TGG 0.530453 2:+51833877 MsG0280009431.01.T01:CDS
GTCCCATCTCCTTTAAGCAC+AGG 0.532466 2:+51834935 MsG0280009431.01.T01:CDS
CCGTTTGAAGCAACAATGAG+AGG 0.545514 2:+51829479 MsG0280009431.01.T01:exon
TTGTCGTACGAGATGAATCA+AGG 0.547040 2:-51829775 None:intergenic
GTGGTTGACTTGTTCTCTGA+CGG 0.550045 2:+51832643 MsG0280009431.01.T01:CDS
CTCCTGTGCTTAAAGGAGAT+GGG 0.552215 2:-51834937 None:intergenic
CAAATCCTCTGATGGAATGA+AGG 0.556833 2:-51832218 None:intergenic
CAAGATTTCAGATCAGGTAA+AGG 0.561116 2:-51834902 None:intergenic
AAACATACCTCTTGCAGCTG+AGG 0.563231 2:-51832676 None:intergenic
TCTGATGCTTGAATTGTGGC+CGG 0.563302 2:+51831406 MsG0280009431.01.T01:CDS
GAAACAGCAATGGCAATATG+TGG 0.563821 2:-51829530 None:intergenic
TGGCCGGCACTGCACCTGGA+AGG 0.565541 2:+51831422 MsG0280009431.01.T01:CDS
AACAAACAAACATACCCAGC+AGG 0.570653 2:-51829918 None:intergenic
AATTATCAAATGACGAGGCA+TGG 0.572264 2:+51833917 MsG0280009431.01.T01:CDS
TGAACAATTTCCAGGAATTG+TGG 0.573919 2:+51832624 MsG0280009431.01.T01:intron
CTGGAGAAGACAAACAAAGA+TGG 0.577869 2:+51832166 MsG0280009431.01.T01:CDS
TGGTTGAACATAGAGAATTG+AGG 0.580462 2:+51829442 None:intergenic
TACCAAACCTAAGATAGCAA+TGG 0.583738 2:-51831124 None:intergenic
CATGATAGATTGATGGCCAA+TGG 0.587007 2:+51833835 MsG0280009431.01.T01:CDS
AAAGTGGACTAATTCCTGCT+GGG 0.593860 2:+51829904 MsG0280009431.01.T01:CDS
GTTCACCATAAAACGACCAT+TGG 0.610306 2:-51833851 None:intergenic
GATTTGCACAGAAGATATGC+CGG 0.612490 2:+51832235 MsG0280009431.01.T01:CDS
CGTTTGAAGCAACAATGAGA+GGG 0.620802 2:+51829480 MsG0280009431.01.T01:exon
CAATTCAAGCATCAGATGAG+CGG 0.627998 2:-51831399 None:intergenic
ATTCTAGAAACTATTTCACA+AGG 0.633162 2:-51834974 None:intergenic
GAAAAGCATTCTAGATTTAG+GGG 0.640283 2:-51829753 None:intergenic
GAACTGCGGCGGGATCGATG+GGG 0.666515 2:+51833870 MsG0280009431.01.T01:CDS
AAATTGGAAGAGAATGCCGA+AGG 0.669970 2:+51834847 MsG0280009431.01.T01:CDS
GTGAGAATGAGAAACAGCAA+TGG 0.672128 2:-51829540 None:intergenic
GAGAAGACAAACAAAGATGG+CGG 0.674112 2:+51832169 MsG0280009431.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATATTTATTAGATATGA+AGG - Chr2:51831915-51831934 None:intergenic 10.0%
!! AAAATTTGTAATCTTTATAT+GGG + Chr2:51834064-51834083 MsG0280009431.01.T01:intron 10.0%
!! AAATATTTATTAGATATGAA+GGG - Chr2:51831914-51831933 None:intergenic 10.0%
!! ACATCAATAATAATATAAAT+TGG + Chr2:51832796-51832815 MsG0280009431.01.T01:intron 10.0%
!! ATAATAATATAAATTGGAAT+TGG + Chr2:51832802-51832821 MsG0280009431.01.T01:intron 10.0%
!! AACAAGTAAAAACATATAAA+GGG - Chr2:51832828-51832847 None:intergenic 15.0%
!! AATCATATTTAATGCTAATA+AGG + Chr2:51830624-51830643 MsG0280009431.01.T01:intron 15.0%
!! AATCTTTATATGAGATATAA+GGG + Chr2:51834159-51834178 MsG0280009431.01.T01:intron 15.0%
!! AATGTCTAATCAATTTAAAT+TGG - Chr2:51834254-51834273 None:intergenic 15.0%
!! CAAAATTTGTAATCTTTATA+TGG + Chr2:51834063-51834082 MsG0280009431.01.T01:intron 15.0%
!! CATTGAATTAAAAATGTTAT+TGG - Chr2:51831581-51831600 None:intergenic 15.0%
!! TAATCTTTATATGAGATATA+AGG + Chr2:51834158-51834177 MsG0280009431.01.T01:intron 15.0%
!! TTTAAATTGGAAAATCAAAA+TGG - Chr2:51834241-51834260 None:intergenic 15.0%
!! TTTCAATATTATCTATACTA+TGG + Chr2:51831545-51831564 MsG0280009431.01.T01:intron 15.0%
!!! AATACAAAACGTTTTATTAT+CGG + Chr2:51834214-51834233 MsG0280009431.01.T01:intron 15.0%
!!! AATGTAAAAATATGTTTTGT+AGG + Chr2:51835020-51835039 MsG0280009431.01.T01:three_prime_UTR 15.0%
!!! ATGTAAAAATATGTTTTGTA+GGG + Chr2:51835021-51835040 MsG0280009431.01.T01:three_prime_UTR 15.0%
!!! ATTTTGAAATGTTAATTTCA+GGG + Chr2:51834673-51834692 MsG0280009431.01.T01:intron 15.0%
!!! TTTAGTTTCATAGATTATTT+TGG - Chr2:51834372-51834391 None:intergenic 15.0%
!!! TTTTCTTTTGACTATTTAAT+GGG + Chr2:51832565-51832584 MsG0280009431.01.T01:intron 15.0%
!! AAAAAAATTAATTGGACCAA+TGG + Chr2:51833586-51833605 MsG0280009431.01.T01:intron 20.0%
!! AAAAAAATTATCAAATGACG+AGG + Chr2:51833912-51833931 MsG0280009431.01.T01:CDS 20.0%
!! AAAGTCAAATAATATAGCAT+AGG - Chr2:51834781-51834800 None:intergenic 20.0%
!! ACATAATTAGAGAAAGTAAT+AGG - Chr2:51833528-51833547 None:intergenic 20.0%
!! ATTTAGTAAAACTAAAGCAT+AGG + Chr2:51830595-51830614 MsG0280009431.01.T01:intron 20.0%
!! ATTTGAGTATAGATTATAGA+AGG + Chr2:51831768-51831787 MsG0280009431.01.T01:intron 20.0%
!! CATGGTAAAATTAAATAACT+TGG + Chr2:51831821-51831840 MsG0280009431.01.T01:intron 20.0%
!! CTGAAATTAACATTTCAAAA+TGG - Chr2:51834674-51834693 None:intergenic 20.0%
!! CTTATTTATAAGAGAAACTT+GGG - Chr2:51831309-51831328 None:intergenic 20.0%
!! GAACAAGTAAAAACATATAA+AGG - Chr2:51832829-51832848 None:intergenic 20.0%
!! GCTTAAGCAAAAAAATTAAT+TGG + Chr2:51833578-51833597 MsG0280009431.01.T01:intron 20.0%
!! GTAATTTCTTAATCTTAAGA+TGG + Chr2:51831144-51831163 MsG0280009431.01.T01:intron 20.0%
!! TATGATTTGAGAAAATTTGT+TGG + Chr2:51830001-51830020 MsG0280009431.01.T01:intron 20.0%
!! TTATCGATCAACTAAATATT+TGG - Chr2:51832118-51832137 None:intergenic 20.0%
!! TTGCAATTAACAAAATATAC+TGG - Chr2:51832997-51833016 None:intergenic 20.0%
!! TTTATGCATTTATCAAGATA+AGG - Chr2:51833325-51833344 None:intergenic 20.0%
!! TTTCCGAGAAAATAAAATTT+GGG - Chr2:51832094-51832113 None:intergenic 20.0%
!!! AACTTTTTTTGTAGAAATTG+CGG - Chr2:51831607-51831626 None:intergenic 20.0%
!!! AATTAAGTTGTTTATCCAAA+CGG + Chr2:51832331-51832350 MsG0280009431.01.T01:intron 20.0%
!!! ACTTTTTAATGTCATATTTG+AGG + Chr2:51834796-51834815 MsG0280009431.01.T01:intron 20.0%
!!! AGTATATTTTGTTAATTGCA+AGG + Chr2:51832996-51833015 MsG0280009431.01.T01:intron 20.0%
!!! ATACTGTTTTTAAATCTTCA+GGG + Chr2:51831365-51831384 MsG0280009431.01.T01:intron 20.0%
!!! CAAATACTCTACAATTTTTA+TGG + Chr2:51831884-51831903 MsG0280009431.01.T01:intron 20.0%
!!! CATTTTGAAATGTTAATTTC+AGG + Chr2:51834672-51834691 MsG0280009431.01.T01:intron 20.0%
!!! CTTTTCTTTTGACTATTTAA+TGG + Chr2:51832564-51832583 MsG0280009431.01.T01:intron 20.0%
!!! TAATAAGGAATTTTTGTCTA+GGG + Chr2:51830639-51830658 MsG0280009431.01.T01:intron 20.0%
!!! TATTCTTTTGTCATTTTCTT+GGG + Chr2:51835079-51835098 MsG0280009431.01.T01:three_prime_UTR 20.0%
!!! TCGTCATTTGATAATTTTTT+TGG - Chr2:51833913-51833932 None:intergenic 20.0%
!!! TCTTATTTATAAGAGAAACT+TGG - Chr2:51831310-51831329 None:intergenic 20.0%
!!! TTTCTTTTGACTATTTAATG+GGG + Chr2:51832566-51832585 MsG0280009431.01.T01:intron 20.0%
!!! TTTTCCGAGAAAATAAAATT+TGG - Chr2:51832095-51832114 None:intergenic 20.0%
!!! TTTTTACATTTACTAAGAAG+TGG - Chr2:51835010-51835029 None:intergenic 20.0%
!!! TTTTTAGTCAATTTTGTTGA+TGG - Chr2:51834560-51834579 None:intergenic 20.0%
! AAAAAGACTAATGCAATCAA+GGG + Chr2:51834633-51834652 MsG0280009431.01.T01:intron 25.0%
! AACATTAATGCATCATTGAA+TGG + Chr2:51832479-51832498 MsG0280009431.01.T01:intron 25.0%
! AATAGAAACAGAGAAAACAA+AGG - Chr2:51829807-51829826 None:intergenic 25.0%
! AATTTCTAACACTATGTCAA+AGG - Chr2:51830838-51830857 None:intergenic 25.0%
! AGGTTAATGGGAATAAAATA+TGG + Chr2:51833089-51833108 MsG0280009431.01.T01:intron 25.0%
! ATACAATGTGAAGATACTTT+AGG - Chr2:51830679-51830698 None:intergenic 25.0%
! ATAGAAACAGAGAAAACAAA+GGG - Chr2:51829806-51829825 None:intergenic 25.0%
! ATTGTCTTGGTCAATTTATA+CGG + Chr2:51831172-51831191 MsG0280009431.01.T01:intron 25.0%
! ATTTAGTCCCTAAAATTGTA+AGG - Chr2:51834714-51834733 None:intergenic 25.0%
! ATTTCTAACACTATGTCAAA+GGG - Chr2:51830837-51830856 None:intergenic 25.0%
! CATTATTGTTATCGAATAAG+AGG - Chr2:51833452-51833471 None:intergenic 25.0%
! CATTCTCTTATAAATAGGAA+CGG - Chr2:51831222-51831241 None:intergenic 25.0%
! CCTAACATTCTCTTATAAAT+AGG - Chr2:51831227-51831246 None:intergenic 25.0%
! CCTATTTATAAGAGAATGTT+AGG + Chr2:51831224-51831243 MsG0280009431.01.T01:intron 25.0%
! GAAAAATAGAAAAGTGAAGA+TGG + Chr2:51833156-51833175 MsG0280009431.01.T01:intron 25.0%
! GATGAGAAAAAATGTAAGAA+AGG + Chr2:51830348-51830367 MsG0280009431.01.T01:intron 25.0%
! GGTCATTATAAAATTGTTCT+TGG + Chr2:51832716-51832735 MsG0280009431.01.T01:intron 25.0%
! GTCAAATTGTCTTAGAATTT+GGG + Chr2:51830044-51830063 MsG0280009431.01.T01:intron 25.0%
! GTCATTCATTTATATGGTAT+AGG + Chr2:51832909-51832928 MsG0280009431.01.T01:intron 25.0%
! GTTTAGGTCATTCATTTATA+TGG + Chr2:51832903-51832922 MsG0280009431.01.T01:intron 25.0%
! GTTTCTCTTATAAATAAGAC+CGG + Chr2:51831311-51831330 MsG0280009431.01.T01:intron 25.0%
! TAACCAATCTAACTAACTAA+TGG + Chr2:51832391-51832410 MsG0280009431.01.T01:intron 25.0%
! TGTCAAATTGTCTTAGAATT+TGG + Chr2:51830043-51830062 MsG0280009431.01.T01:intron 25.0%
! TGTTCATAGCATTCTTTATA+AGG + Chr2:51829877-51829896 MsG0280009431.01.T01:CDS 25.0%
! TTCTTTATAAGGACAAAAAG+TGG + Chr2:51829888-51829907 MsG0280009431.01.T01:CDS 25.0%
! TTTAGTCCCTAAAATTGTAA+GGG - Chr2:51834713-51834732 None:intergenic 25.0%
!! ACAAACATGAAATTTGTTCT+TGG + Chr2:51831681-51831700 MsG0280009431.01.T01:intron 25.0%
!! AGAAAACATGGTTGATATTA+TGG + Chr2:51833134-51833153 MsG0280009431.01.T01:intron 25.0%
!! ATTAAGTTGTTTATCCAAAC+GGG + Chr2:51832332-51832351 MsG0280009431.01.T01:intron 25.0%
!! ATTCTAGAAACTATTTCACA+AGG - Chr2:51834977-51834996 None:intergenic 25.0%
!! CTAATAAGGAATTTTTGTCT+AGG + Chr2:51830638-51830657 MsG0280009431.01.T01:intron 25.0%
!! GATAAAGCAAGAGATTATTT+TGG + Chr2:51832133-51832152 MsG0280009431.01.T01:CDS 25.0%
!! TAATGCACAAACAGTTATTT+TGG + Chr2:51833420-51833439 MsG0280009431.01.T01:intron 25.0%
!! TTTTATGATTCCATAACCAT+TGG - Chr2:51833605-51833624 None:intergenic 25.0%
!! TTTTCATTTCTCAGCTAAAT+TGG + Chr2:51834831-51834850 MsG0280009431.01.T01:intron 25.0%
!!! ATTATAGAAGGTACTTTCAT+TGG + Chr2:51831780-51831799 MsG0280009431.01.T01:intron 25.0%
!!! ATTCTTTTGTCATTTTCTTG+GGG + Chr2:51835080-51835099 MsG0280009431.01.T01:three_prime_UTR 25.0%
!!! ATTTTTTATAAGAAGATGCC+AGG + Chr2:51831930-51831949 MsG0280009431.01.T01:intron 25.0%
!!! CATACTGTTTTTAAATCTTC+AGG + Chr2:51831364-51831383 MsG0280009431.01.T01:intron 25.0%
!!! GTATTCTTTTGTCATTTTCT+TGG + Chr2:51835078-51835097 MsG0280009431.01.T01:three_prime_UTR 25.0%
!!! GTTTGTTACTTTCACATTTA+GGG + Chr2:51829938-51829957 MsG0280009431.01.T01:intron 25.0%
!!! TCACCCAAATTTTATTTTCT+CGG + Chr2:51832088-51832107 MsG0280009431.01.T01:intron 25.0%
!!! TGTTTGTTACTTTCACATTT+AGG + Chr2:51829937-51829956 MsG0280009431.01.T01:intron 25.0%
!!! TTCTAAGACAATTTGACAAT+AGG - Chr2:51830041-51830060 None:intergenic 25.0%
!!! TTGATTGCATTAGTCTTTTT+GGG - Chr2:51834633-51834652 None:intergenic 25.0%
!!! TTTGTTACTTTCACATTTAG+GGG + Chr2:51829939-51829958 MsG0280009431.01.T01:intron 25.0%
!!! TTTTTTCCTTGAGAAATCAA+AGG + Chr2:51833710-51833729 MsG0280009431.01.T01:intron 25.0%
AAAACTTCATGCGTTAGAAT+AGG - Chr2:51834124-51834143 None:intergenic 30.0%
AAACTTCATGCGTTAGAATA+GGG - Chr2:51834123-51834142 None:intergenic 30.0%
AAAGAAAAGTGATGTCTGAA+TGG - Chr2:51832553-51832572 None:intergenic 30.0%
AATTATTCATCGCAAAGCAT+GGG + Chr2:51831036-51831055 MsG0280009431.01.T01:intron 30.0%
ACTAATAAAAGCTCATAGGA+TGG - Chr2:51833369-51833388 None:intergenic 30.0%
ACTTACAAGCATCAACATTT+AGG - Chr2:51830970-51830989 None:intergenic 30.0%
AGTCCATTAGTTAGTTAGAT+TGG - Chr2:51832397-51832416 None:intergenic 30.0%
ATACAATGAAAATGACTCAC+CGG - Chr2:51832257-51832276 None:intergenic 30.0%
ATTAATTGGACCAATGGTTA+TGG + Chr2:51833592-51833611 MsG0280009431.01.T01:intron 30.0%
ATTATCACATTACAAGCGTA+AGG - Chr2:51830085-51830104 None:intergenic 30.0%
CAAAAAGACTAATGCAATCA+AGG + Chr2:51834632-51834651 MsG0280009431.01.T01:intron 30.0%
CGCTTGTAATGTGATAATTA+CGG + Chr2:51830087-51830106 MsG0280009431.01.T01:intron 30.0%
CTAATAAAAGCTCATAGGAT+GGG - Chr2:51833368-51833387 None:intergenic 30.0%
GAACTTTGTAAGCATTACTT+AGG + Chr2:51830117-51830136 MsG0280009431.01.T01:intron 30.0%
GATAACAATCAACAAGACAT+TGG - Chr2:51832015-51832034 None:intergenic 30.0%
GATACTTGATTGTACAGTTT+AGG + Chr2:51832887-51832906 MsG0280009431.01.T01:intron 30.0%
GCAAACTAATAAAAGCTCAT+AGG - Chr2:51833373-51833392 None:intergenic 30.0%
GCAATATGTGGAAAACTAAA+TGG - Chr2:51829521-51829540 None:intergenic 30.0%
GGAATTACATGATAGATTGA+TGG + Chr2:51833828-51833847 MsG0280009431.01.T01:CDS 30.0%
GGCATTCTAAATGTTCATAT+TGG + Chr2:51832190-51832209 MsG0280009431.01.T01:CDS 30.0%
GTAAGAAAGGAAGTGAAAAT+GGG + Chr2:51830361-51830380 MsG0280009431.01.T01:intron 30.0%
GTCTAAATAAACTGACCAAA+AGG - Chr2:51834599-51834618 None:intergenic 30.0%
TAAGATGGTGTATATTGTCT+TGG + Chr2:51831159-51831178 MsG0280009431.01.T01:intron 30.0%
TAATAAAAGCTCATAGGATG+GGG - Chr2:51833367-51833386 None:intergenic 30.0%
TACTCCTACTGCATAAAATA+AGG - Chr2:51832528-51832547 None:intergenic 30.0%
TAGAAACAGAGAAAACAAAG+GGG - Chr2:51829805-51829824 None:intergenic 30.0%
TAGATAGTCATCAGAAAACA+TGG + Chr2:51833122-51833141 MsG0280009431.01.T01:intron 30.0%
TAGTACTTCCTAAGAATATG+AGG + Chr2:51834036-51834055 MsG0280009431.01.T01:intron 30.0%
TATACATGTGAACAATTTCC+AGG + Chr2:51832616-51832635 MsG0280009431.01.T01:intron 30.0%
TCTCAAATCATAAACTCCTA+TGG - Chr2:51829993-51830012 None:intergenic 30.0%
TGAAGATACTTTAGGCATAA+AGG - Chr2:51830671-51830690 None:intergenic 30.0%
TGTAAGAAAGGAAGTGAAAA+TGG + Chr2:51830360-51830379 MsG0280009431.01.T01:intron 30.0%
TTGTGTATTAATCTCGTTCT+TGG + Chr2:51830290-51830309 MsG0280009431.01.T01:intron 30.0%
TTTCTAACACTATGTCAAAG+GGG - Chr2:51830836-51830855 None:intergenic 30.0%
TTTGGTCAGTTTATTTAGAC+TGG + Chr2:51834599-51834618 MsG0280009431.01.T01:intron 30.0%
TTTGTTGACCTCATATTCTT+AGG - Chr2:51834047-51834066 None:intergenic 30.0%
! AAGTTAACTTTTATCATCGC+AGG + Chr2:51833749-51833768 MsG0280009431.01.T01:intron 30.0%
! AGAGTATTTGAACATGAACA+TGG - Chr2:51831874-51831893 None:intergenic 30.0%
! CACATCTTAACATAATGGAA+CGG + Chr2:51832436-51832455 MsG0280009431.01.T01:intron 30.0%
! CATTGATTAGATCCATAATG+CGG + Chr2:51832052-51832071 MsG0280009431.01.T01:intron 30.0%
! CTAGACTCAAACTTCTATTT+TGG - Chr2:51833651-51833670 None:intergenic 30.0%
! TAGTTCTTTATTTGTCTGAC+AGG + Chr2:51833792-51833811 MsG0280009431.01.T01:intron 30.0%
! TATCATTAACTTGAGTCCAT+AGG + Chr2:51829974-51829993 MsG0280009431.01.T01:intron 30.0%
! TTAAGTTGTTTATCCAAACG+GGG + Chr2:51832333-51832352 MsG0280009431.01.T01:intron 30.0%
! TTCATACCTTTGATTTCTCA+AGG - Chr2:51833719-51833738 None:intergenic 30.0%
!! AAAAGAGTGCTGTCAAATAT+CGG + Chr2:51834390-51834409 MsG0280009431.01.T01:intron 30.0%
!! AGGAAAAGCATTCTAGATTT+AGG - Chr2:51829758-51829777 None:intergenic 30.0%
!! AGTGTTACATTGATTTGTCT+TGG + Chr2:51830886-51830905 MsG0280009431.01.T01:intron 30.0%
!! GAAAAGCATTCTAGATTTAG+GGG - Chr2:51829756-51829775 None:intergenic 30.0%
!! GGAAAAGCATTCTAGATTTA+GGG - Chr2:51829757-51829776 None:intergenic 30.0%
!! GTGTTACATTGATTTGTCTT+GGG + Chr2:51830887-51830906 MsG0280009431.01.T01:intron 30.0%
!! TTAGTCAATTTTGTTGATGG+CGG - Chr2:51834557-51834576 None:intergenic 30.0%
!!! AGAGTATTGGTTTTAGTGTT+GGG - Chr2:51829583-51829602 None:intergenic 30.0%
!!! CTTGATTGCATTAGTCTTTT+TGG - Chr2:51834634-51834653 None:intergenic 30.0%
!!! TTATTTTGGCTTATCTGATC+TGG + Chr2:51832147-51832166 MsG0280009431.01.T01:CDS 30.0%
AAAATAAGGATCCATTCACG+TGG - Chr2:51832514-51832533 None:intergenic 35.0%
AAACTGACCAAAAGGACTAA+TGG - Chr2:51834591-51834610 None:intergenic 35.0%
AAATAGATGCTTACTTGTCC+AGG - Chr2:51833982-51834001 None:intergenic 35.0%
AACATAATTGATACTCCCTC+CGG - Chr2:51831333-51831352 None:intergenic 35.0%
AACTGACCAAAAGGACTAAT+GGG - Chr2:51834590-51834609 None:intergenic 35.0%
AAGTATCTCACGAAGCAAAT+TGG - Chr2:51832874-51832893 None:intergenic 35.0%
AATAAAAGCTCATAGGATGG+GGG - Chr2:51833366-51833385 None:intergenic 35.0%
AATCTTTGTTCTTTCACCAG+AGG - Chr2:51833248-51833267 None:intergenic 35.0%
AATTATCAAATGACGAGGCA+TGG + Chr2:51833917-51833936 MsG0280009431.01.T01:CDS 35.0%
AATTTGACAACTTTGTCGTG+TGG + Chr2:51830854-51830873 MsG0280009431.01.T01:intron 35.0%
ACATGGTATTAAGACTGACT+TGG - Chr2:51831857-51831876 None:intergenic 35.0%
ACCAAACCTAAGATAGCAAT+GGG - Chr2:51831126-51831145 None:intergenic 35.0%
ACTAGCATCTGTTTACTTTC+TGG - Chr2:51834100-51834119 None:intergenic 35.0%
AGAAACAGAGAAAACAAAGG+GGG - Chr2:51829804-51829823 None:intergenic 35.0%
ATTACTTAGGCCATATCTGT+AGG + Chr2:51830130-51830149 MsG0280009431.01.T01:intron 35.0%
ATTCCCATTAACCTCAGATT+TGG - Chr2:51833083-51833102 None:intergenic 35.0%
ATTGTAAGGGTCTGACAATT+TGG - Chr2:51834700-51834719 None:intergenic 35.0%
CAAGATTTCAGATCAGGTAA+AGG - Chr2:51834905-51834924 None:intergenic 35.0%
CATTGTATTCGCTGTGATTT+GGG - Chr2:51830531-51830550 None:intergenic 35.0%
CGTTCCATTATGTTAAGATG+TGG - Chr2:51832438-51832457 None:intergenic 35.0%
CTCTTATAAATAAGACCGGA+GGG + Chr2:51831315-51831334 MsG0280009431.01.T01:intron 35.0%
CTCTTATAAATAGGAACGGA+GGG - Chr2:51831218-51831237 None:intergenic 35.0%
CTGAACTTATTGCATTGAAC+AGG + Chr2:51831062-51831081 MsG0280009431.01.T01:intron 35.0%
CTGGTGAAAGAACAAAGATT+AGG + Chr2:51833248-51833267 MsG0280009431.01.T01:intron 35.0%
GAATAATTCCACTACTACAG+TGG + Chr2:51833195-51833214 MsG0280009431.01.T01:intron 35.0%
GAATTATTCATCGCAAAGCA+TGG + Chr2:51831035-51831054 MsG0280009431.01.T01:intron 35.0%
GTTTCAGATTTGCAAGTTCT+AGG + Chr2:51832695-51832714 MsG0280009431.01.T01:intron 35.0%
TACCAAACCTAAGATAGCAA+TGG - Chr2:51831127-51831146 None:intergenic 35.0%
TAGTCAAACTATAGCTGACA+TGG + Chr2:51831803-51831822 MsG0280009431.01.T01:intron 35.0%
TATAGCATAGGATGTGAAGT+TGG - Chr2:51834769-51834788 None:intergenic 35.0%
TATAGGAAGATCAGAGTTTG+TGG + Chr2:51832926-51832945 MsG0280009431.01.T01:intron 35.0%
TCATTGTATTCGCTGTGATT+TGG - Chr2:51830532-51830551 None:intergenic 35.0%
TCCATTATGTTAAGATGTGG+CGG - Chr2:51832435-51832454 None:intergenic 35.0%
TCTAGCATTACCTACAGATA+TGG - Chr2:51830143-51830162 None:intergenic 35.0%
TCTCTTATAAATAAGACCGG+AGG + Chr2:51831314-51831333 MsG0280009431.01.T01:intron 35.0%
TCTCTTATAAATAGGAACGG+AGG - Chr2:51831219-51831238 None:intergenic 35.0%
TCTTCTTCTTGATCATGATG+TGG - Chr2:51829662-51829681 None:intergenic 35.0%
TCTTGGAAAGATGACAACTT+TGG + Chr2:51832733-51832752 MsG0280009431.01.T01:intron 35.0%
TGAACAATTTCCAGGAATTG+TGG + Chr2:51832624-51832643 MsG0280009431.01.T01:intron 35.0%
TGCCTAAAACAGAAGAAAAG+AGG - Chr2:51831958-51831977 None:intergenic 35.0%
TGCCTCTTATTCGAAAATCA+AGG + Chr2:51833494-51833513 MsG0280009431.01.T01:intron 35.0%
TGCTAATTACGCCTTAATTG+AGG - Chr2:51830259-51830278 None:intergenic 35.0%
TGGCTTATAGCTGAGTTATT+AGG - Chr2:51832854-51832873 None:intergenic 35.0%
! ATTGGTTAGCTAGTTAGGTA+GGG - Chr2:51832379-51832398 None:intergenic 35.0%
! CACCTTGATTTTCGAATAAG+AGG - Chr2:51833499-51833518 None:intergenic 35.0%
! CTTTACCTGATCTGAAATCT+TGG + Chr2:51834903-51834922 MsG0280009431.01.T01:CDS 35.0%
! GAGAATTTTATGGCACTTAC+AGG + Chr2:51834878-51834897 MsG0280009431.01.T01:CDS 35.0%
! GATCCAAATCTGAGGTTAAT+GGG + Chr2:51833077-51833096 MsG0280009431.01.T01:intron 35.0%
! GTCAGACCCTTACAATTTTA+GGG + Chr2:51834704-51834723 MsG0280009431.01.T01:intron 35.0%
! GTTAGATTGGTTAGCTAGTT+AGG - Chr2:51832384-51832403 None:intergenic 35.0%
! TACTCATGTGAGTTTTTGAC+AGG + Chr2:51832957-51832976 MsG0280009431.01.T01:intron 35.0%
! TGCCTCTTTTCTTCTGTTTT+AGG + Chr2:51831953-51831972 MsG0280009431.01.T01:intron 35.0%
! TGTCAGACCCTTACAATTTT+AGG + Chr2:51834703-51834722 MsG0280009431.01.T01:intron 35.0%
! TTATGGATAGAGGAGAGTAT+TGG - Chr2:51829596-51829615 None:intergenic 35.0%
! TTTTTAAATCTTCAGGGTGG+TGG + Chr2:51831371-51831390 MsG0280009431.01.T01:intron 35.0%
!!! CTGTTTTTAAATCTTCAGGG+TGG + Chr2:51831368-51831387 MsG0280009431.01.T01:intron 35.0%
!!! GAGAGTATTGGTTTTAGTGT+TGG - Chr2:51829584-51829603 None:intergenic 35.0%
!!! GAGTATTGGTTTTAGTGTTG+GGG - Chr2:51829582-51829601 None:intergenic 35.0%
!!! GGATCCTTATTTTATGCAGT+AGG + Chr2:51832521-51832540 MsG0280009431.01.T01:intron 35.0%
AAAGGTCCCATTGCTATCTT+AGG + Chr2:51831117-51831136 MsG0280009431.01.T01:CDS 40.0%
AAATTCTCACCCGTTTCCTT+CGG - Chr2:51834866-51834885 None:intergenic 40.0%
AAATTGGAAGAGAATGCCGA+AGG + Chr2:51834847-51834866 MsG0280009431.01.T01:CDS 40.0%
AACAAACAAACATACCCAGC+AGG - Chr2:51829921-51829940 None:intergenic 40.0%
AACAAGTCAACCACAATTCC+TGG - Chr2:51832637-51832656 None:intergenic 40.0%
AAGTGAGAACATCCGCATTA+TGG - Chr2:51832067-51832086 None:intergenic 40.0%
ACACTATGTCAAAGGGGTTA+AGG - Chr2:51830830-51830849 None:intergenic 40.0%
ACGGTGAAGCATAATTCAAC+TGG + Chr2:51832455-51832474 MsG0280009431.01.T01:intron 40.0%
AGATCAGAGTTTGTGGAACT+CGG + Chr2:51832933-51832952 MsG0280009431.01.T01:intron 40.0%
ATAAAAGCTCATAGGATGGG+GGG - Chr2:51833365-51833384 None:intergenic 40.0%
ATCAAATGATCGCTGTCTAG+CGG - Chr2:51830486-51830505 None:intergenic 40.0%
ATGATGTGGCTGTTGATGTT+GGG - Chr2:51829648-51829667 None:intergenic 40.0%
ATGTAGAAAGCTCACATGAG+AGG + Chr2:51833055-51833074 MsG0280009431.01.T01:intron 40.0%
CAAATCCTCTGATGGAATGA+AGG - Chr2:51832221-51832240 None:intergenic 40.0%
CAAATTGTCCACTAGTGCTT+TGG + Chr2:51831744-51831763 MsG0280009431.01.T01:intron 40.0%
CAATTCAAGCATCAGATGAG+CGG - Chr2:51831402-51831421 None:intergenic 40.0%
CACTATGTCAAAGGGGTTAA+GGG - Chr2:51830829-51830848 None:intergenic 40.0%
CTAGACAGCGATCATTTGAT+GGG + Chr2:51830486-51830505 MsG0280009431.01.T01:intron 40.0%
CTCATCTGATGCTTGAATTG+TGG + Chr2:51831402-51831421 MsG0280009431.01.T01:CDS 40.0%
CTGGAGAAGACAAACAAAGA+TGG + Chr2:51832166-51832185 MsG0280009431.01.T01:CDS 40.0%
GAAACAGCAATGGCAATATG+TGG - Chr2:51829533-51829552 None:intergenic 40.0%
GAAGTGAAAATGGGAGAATC+TGG + Chr2:51830370-51830389 MsG0280009431.01.T01:intron 40.0%
GAATGGACGATTATGGATAG+AGG - Chr2:51829606-51829625 None:intergenic 40.0%
GACACATCAAATAGTTCACG+TGG - Chr2:51831516-51831535 None:intergenic 40.0%
GAGAAGACAAACAAAGATGG+CGG + Chr2:51832169-51832188 MsG0280009431.01.T01:CDS 40.0%
GATTTGCACAGAAGATATGC+CGG + Chr2:51832235-51832254 MsG0280009431.01.T01:CDS 40.0%
GTAACCCAAATGCCACAATT+AGG + Chr2:51830225-51830244 MsG0280009431.01.T01:intron 40.0%
GTGAGAATGAGAAACAGCAA+TGG - Chr2:51829543-51829562 None:intergenic 40.0%
GTTCACCATAAAACGACCAT+TGG - Chr2:51833854-51833873 None:intergenic 40.0%
TACTTGTCCAGGAAATGCTT+TGG - Chr2:51833971-51833990 None:intergenic 40.0%
TCCCATTGCTATCTTAGGTT+TGG + Chr2:51831122-51831141 MsG0280009431.01.T01:CDS 40.0%
TCCGCCACATCTTAACATAA+TGG + Chr2:51832431-51832450 MsG0280009431.01.T01:intron 40.0%
TCTGCCTAATTGTGGCATTT+GGG - Chr2:51830232-51830251 None:intergenic 40.0%
TGAAGTGAAGTTGGAGAGAA+TGG - Chr2:51829623-51829642 None:intergenic 40.0%
TGCATCATTGAATGGTTGAG+TGG + Chr2:51832487-51832506 MsG0280009431.01.T01:intron 40.0%
TGTAACTTCCACTGTAGTAG+TGG - Chr2:51833206-51833225 None:intergenic 40.0%
TGTTGGGAATGAAGTGAAGT+TGG - Chr2:51829632-51829651 None:intergenic 40.0%
TTAAAAACACAAGCCCCGTT+TGG - Chr2:51832349-51832368 None:intergenic 40.0%
TTGGAGAGAATGGACGATTA+TGG - Chr2:51829613-51829632 None:intergenic 40.0%
TTGTCGTACGAGATGAATCA+AGG - Chr2:51829778-51829797 None:intergenic 40.0%
TTGTCTGACAGGTTAGTACT+TGG + Chr2:51833803-51833822 MsG0280009431.01.T01:intron 40.0%
! AACTTTTATCATCGCAGGCA+TGG + Chr2:51833754-51833773 MsG0280009431.01.T01:intron 40.0%
! AAGATAGCAATGGGACCTTT+TGG - Chr2:51831117-51831136 None:intergenic 40.0%
! ATCACAAGTTTTTCTGCCTC+TGG + Chr2:51833229-51833248 MsG0280009431.01.T01:intron 40.0%
! CATGATAGATTGATGGCCAA+TGG + Chr2:51833835-51833854 MsG0280009431.01.T01:CDS 40.0%
! CCTCTCATTGTTGCTTCAAA+CGG - Chr2:51829482-51829501 None:intergenic 40.0%
! CGTTTGAAGCAACAATGAGA+GGG + Chr2:51829480-51829499 MsG0280009431.01.T01:exon 40.0%
! CTCAAATTCCAAAGCACTAG+TGG - Chr2:51831755-51831774 None:intergenic 40.0%
! GATTGGTTAGCTAGTTAGGT+AGG - Chr2:51832380-51832399 None:intergenic 40.0%
! GCATTATCCAAAGCATTTCC+TGG + Chr2:51833961-51833980 MsG0280009431.01.T01:CDS 40.0%
! GGAAACGGGTGAGAATTTTA+TGG + Chr2:51834868-51834887 MsG0280009431.01.T01:CDS 40.0%
! GGATCCAAATCTGAGGTTAA+TGG + Chr2:51833076-51833095 MsG0280009431.01.T01:intron 40.0%
! TCTGATGACTATCTAGAGTC+TGG - Chr2:51833117-51833136 None:intergenic 40.0%
! TTGGTTAGCTAGTTAGGTAG+GGG - Chr2:51832378-51832397 None:intergenic 40.0%
!! AAAAGTGGACTAATTCCTGC+TGG + Chr2:51829903-51829922 MsG0280009431.01.T01:CDS 40.0%
!! AAAGTGGACTAATTCCTGCT+GGG + Chr2:51829904-51829923 MsG0280009431.01.T01:CDS 40.0%
!!! AATGGGACCTTTTGGAACAA+TGG - Chr2:51831109-51831128 None:intergenic 40.0%
AAACATACCTCTTGCAGCTG+AGG - Chr2:51832679-51832698 None:intergenic 45.0%
AAGAGAATGCCGAAGGAAAC+GGG + Chr2:51834854-51834873 MsG0280009431.01.T01:CDS 45.0%
ACGCAGCACAATATAGGTGT+TGG + Chr2:51830188-51830207 MsG0280009431.01.T01:intron 45.0%
ACTCCTGTGCTTAAAGGAGA+TGG - Chr2:51834941-51834960 None:intergenic 45.0%
AGGCAGACAGACCTCAATTA+AGG + Chr2:51830245-51830264 MsG0280009431.01.T01:intron 45.0%
CAAAAGGACTAATGGGAGCA+GGG - Chr2:51834583-51834602 None:intergenic 45.0%
CATGAGAGGATCCAAATCTG+AGG + Chr2:51833069-51833088 MsG0280009431.01.T01:intron 45.0%
CATGATGTGGCTGTTGATGT+TGG - Chr2:51829649-51829668 None:intergenic 45.0%
CTCCTGTGCTTAAAGGAGAT+GGG - Chr2:51834940-51834959 None:intergenic 45.0%
CTGACAGGTTAGTACTTGGT+TGG + Chr2:51833807-51833826 MsG0280009431.01.T01:intron 45.0%
CTTCTGTGCAAATCCTCTGA+TGG - Chr2:51832229-51832248 None:intergenic 45.0%
GAAGAGAATGCCGAAGGAAA+CGG + Chr2:51834853-51834872 MsG0280009431.01.T01:CDS 45.0%
GCAGACCAAGATTTCAGATC+AGG - Chr2:51834911-51834930 None:intergenic 45.0%
GCTAGACAGCGATCATTTGA+TGG + Chr2:51830485-51830504 MsG0280009431.01.T01:intron 45.0%
GCTTTGTGGCGTCATCATAT+CGG - Chr2:51834508-51834527 None:intergenic 45.0%
GGCGTCATCATATCGGATTA+TGG - Chr2:51834501-51834520 None:intergenic 45.0%
GTCTGCCTAATTGTGGCATT+TGG - Chr2:51830233-51830252 None:intergenic 45.0%
TAAAAGCTCATAGGATGGGG+GGG - Chr2:51833364-51833383 None:intergenic 45.0%
TCCATCACTCCTGTGCTTAA+AGG - Chr2:51834947-51834966 None:intergenic 45.0%
TCCTTTAAGCACAGGAGTGA+TGG + Chr2:51834943-51834962 MsG0280009431.01.T01:CDS 45.0%
TCGCTAGTAACAGCTTCTCA+CGG - Chr2:51830461-51830480 None:intergenic 45.0%
TCTGATGCTTGAATTGTGGC+CGG + Chr2:51831406-51831425 MsG0280009431.01.T01:CDS 45.0%
TTGCCAGCCATTGTTCCAAA+AGG + Chr2:51831099-51831118 MsG0280009431.01.T01:CDS 45.0%
! CCGTTTGAAGCAACAATGAG+AGG + Chr2:51829479-51829498 MsG0280009431.01.T01:exon 45.0%
! GATATGATGACGCCACAAAG+CGG + Chr2:51834507-51834526 MsG0280009431.01.T01:intron 45.0%
! GGTGTTGGAGGTTGTAATGA+AGG + Chr2:51830203-51830222 MsG0280009431.01.T01:intron 45.0%
!! AACAGAAGAAAAGAGGCACC+TGG - Chr2:51831951-51831970 None:intergenic 45.0%
!! AGGAACGGAGGGAGTATTTA+AGG - Chr2:51831207-51831226 None:intergenic 45.0%
!! ATTTGATGGGCTCAGGTTGA+TGG + Chr2:51830499-51830518 MsG0280009431.01.T01:intron 45.0%
!! CAGCACAATATAGGTGTTGG+AGG + Chr2:51830191-51830210 MsG0280009431.01.T01:intron 45.0%
!! GATGGCCAATGGTCGTTTTA+TGG + Chr2:51833846-51833865 MsG0280009431.01.T01:CDS 45.0%
!! GCATATAAGAGCACTCATGC+AGG + Chr2:51834185-51834204 MsG0280009431.01.T01:intron 45.0%
!! GGTCGTTTTATGGTGAACTG+CGG + Chr2:51833856-51833875 MsG0280009431.01.T01:CDS 45.0%
!! GTGGTTGACTTGTTCTCTGA+CGG + Chr2:51832643-51832662 MsG0280009431.01.T01:CDS 45.0%
!! TAAGCACAGGAGTGATGGAT+TGG + Chr2:51834948-51834967 MsG0280009431.01.T01:CDS 45.0%
AAAAGCTCATAGGATGGGGG+GGG - Chr2:51833363-51833382 None:intergenic 50.0%
ATGCCCAATTTCAGCCGACA+TGG + Chr2:51834463-51834482 MsG0280009431.01.T01:intron 50.0%
CCAAAAGGACTAATGGGAGC+AGG - Chr2:51834584-51834603 None:intergenic 50.0%
CCTATATTGTGCTGCGTGTG+AGG - Chr2:51830185-51830204 None:intergenic 50.0%
CCTCACACGCAGCACAATAT+AGG + Chr2:51830182-51830201 MsG0280009431.01.T01:intron 50.0%
CGATGCCTTCATTCCATCAG+AGG + Chr2:51832213-51832232 MsG0280009431.01.T01:CDS 50.0%
GAGCCTAAATCCTGCCATTC+CGG - Chr2:51834533-51834552 None:intergenic 50.0%
GAGGTCTGTCTGCCTAATTG+TGG - Chr2:51830240-51830259 None:intergenic 50.0%
GTCCCATCTCCTTTAAGCAC+AGG + Chr2:51834935-51834954 MsG0280009431.01.T01:CDS 50.0%
GTGCTGTCAAATATCGGCCA+TGG + Chr2:51834396-51834415 MsG0280009431.01.T01:intron 50.0%
! AGTTTTGCCTCAGCTGCAAG+AGG + Chr2:51832669-51832688 MsG0280009431.01.T01:CDS 50.0%
! ATGTCGGCTGAAATTGGGCA+TGG - Chr2:51834464-51834483 None:intergenic 50.0%
! CCTGCTCCCATTAGTCCTTT+TGG + Chr2:51834581-51834600 MsG0280009431.01.T01:intron 50.0%
! CGTTTTATGGTGAACTGCGG+CGG + Chr2:51833859-51833878 MsG0280009431.01.T01:CDS 50.0%
! GTTTTATGGTGAACTGCGGC+GGG + Chr2:51833860-51833879 MsG0280009431.01.T01:CDS 50.0%
!! AGCGATCATTTGATGGGCTC+AGG + Chr2:51830492-51830511 MsG0280009431.01.T01:intron 50.0%
!!! GGACCTTTTGGAACAATGGC+TGG - Chr2:51831105-51831124 None:intergenic 50.0%
AAAGCTCATAGGATGGGGGG+GGG - Chr2:51833362-51833381 None:intergenic 55.0%
ACCACCACCAATATCCGCCA+AGG - Chr2:51834427-51834446 None:intergenic 55.0%
CATCAATCTCCCAGCCTTCC+AGG - Chr2:51831439-51831458 None:intergenic 55.0%
CCAATTTCAGCCGACATGGC+GGG + Chr2:51834467-51834486 MsG0280009431.01.T01:intron 55.0%
CCCAATTTCAGCCGACATGG+CGG + Chr2:51834466-51834485 MsG0280009431.01.T01:intron 55.0%
GGTTGAGTGGACCACGTGAA+TGG + Chr2:51832500-51832519 MsG0280009431.01.T01:intron 55.0%
TCGGCTGAAATTGGGCATGG+CGG - Chr2:51834461-51834480 None:intergenic 55.0%
TGGAACAATGGCTGGCAAGC+TGG - Chr2:51831097-51831116 None:intergenic 55.0%
! ACCTTGGCGGATATTGGTGG+TGG + Chr2:51834423-51834442 MsG0280009431.01.T01:intron 55.0%
! AGCACCTTGGCGGATATTGG+TGG + Chr2:51834420-51834439 MsG0280009431.01.T01:intron 55.0%
! AGCTAGTTAGGTAGGGGCAC+TGG - Chr2:51832372-51832391 None:intergenic 55.0%
! CCGCCATGTCGGCTGAAATT+GGG - Chr2:51834469-51834488 None:intergenic 55.0%
!! AGCCGACATGGCGGGATTTT+CGG + Chr2:51834475-51834494 MsG0280009431.01.T01:intron 55.0%
!! TGGGCTCAGGTTGATGGTCA+AGG + Chr2:51830505-51830524 MsG0280009431.01.T01:intron 55.0%
AAGCTCATAGGATGGGGGGG+GGG - Chr2:51833361-51833380 None:intergenic 60.0%
CGGCCGGAATGGCAGGATTT+AGG + Chr2:51834527-51834546 MsG0280009431.01.T01:intron 60.0%
GCGTGTGAGGACTGAGGAGT+TGG - Chr2:51830172-51830191 None:intergenic 60.0%
GGCCGAAAATCCCGCCATGT+CGG - Chr2:51834480-51834499 None:intergenic 60.0%
TATCGGCCATGGCAGCACCT+TGG + Chr2:51834407-51834426 MsG0280009431.01.T01:intron 60.0%
TGAACTGCGGCGGGATCGAT+GGG + Chr2:51833869-51833888 MsG0280009431.01.T01:CDS 60.0%
TGTGCTGCGTGTGAGGACTG+AGG - Chr2:51830178-51830197 None:intergenic 60.0%
! CCCGCCATGTCGGCTGAAAT+TGG - Chr2:51834470-51834489 None:intergenic 60.0%
! GGCAGCACCTTGGCGGATAT+TGG + Chr2:51834417-51834436 MsG0280009431.01.T01:intron 60.0%
! TGATGACGCCACAAAGCGGC+CGG + Chr2:51834511-51834530 MsG0280009431.01.T01:intron 60.0%
!! TATCCGCCAAGGTGCTGCCA+TGG - Chr2:51834416-51834435 None:intergenic 60.0%
ACGCCACAAAGCGGCCGGAA+TGG + Chr2:51834516-51834535 MsG0280009431.01.T01:intron 65.0%
AGCTCATAGGATGGGGGGGG+GGG - Chr2:51833360-51833379 None:intergenic 65.0%
ATTGTGGCCGGCACTGCACC+TGG + Chr2:51831418-51831437 MsG0280009431.01.T01:CDS 65.0%
CACAAAGCGGCCGGAATGGC+AGG + Chr2:51834520-51834539 MsG0280009431.01.T01:intron 65.0%
CAGCCTTCCAGGTGCAGTGC+CGG - Chr2:51831428-51831447 None:intergenic 65.0%
GAACTGCGGCGGGATCGATG+GGG + Chr2:51833870-51833889 MsG0280009431.01.T01:CDS 65.0%
GGCACTGCACCTGGAAGGCT+GGG + Chr2:51831427-51831446 MsG0280009431.01.T01:CDS 65.0%
GTGAACTGCGGCGGGATCGA+TGG + Chr2:51833868-51833887 MsG0280009431.01.T01:CDS 65.0%
! CTGCCATTCCGGCCGCTTTG+TGG - Chr2:51834522-51834541 None:intergenic 65.0%
CGGCACTGCACCTGGAAGGC+TGG + Chr2:51831426-51831445 MsG0280009431.01.T01:CDS 70.0%
CGGCCATGGCAGCACCTTGG+CGG + Chr2:51834410-51834429 MsG0280009431.01.T01:intron 70.0%
CTCATAGGATGGGGGGGGGG+GGG - Chr2:51833358-51833377 None:intergenic 70.0%
GCTCATAGGATGGGGGGGGG+GGG - Chr2:51833359-51833378 None:intergenic 70.0%
GGCGGGATCGATGGGGTGGA+TGG + Chr2:51833877-51833896 MsG0280009431.01.T01:CDS 70.0%
TCATAGGATGGGGGGGGGGG+GGG - Chr2:51833357-51833376 None:intergenic 70.0%
TGGCCGGCACTGCACCTGGA+AGG + Chr2:51831422-51831441 MsG0280009431.01.T01:CDS 70.0%
ATAGGATGGGGGGGGGGGGG+GGG - Chr2:51833355-51833374 None:intergenic 75.0%
CATAGGATGGGGGGGGGGGG+GGG - Chr2:51833356-51833375 None:intergenic 75.0%
CTGCGGCGGGATCGATGGGG+TGG + Chr2:51833873-51833892 MsG0280009431.01.T01:CDS 75.0%
! TAGGATGGGGGGGGGGGGGG+GGG - Chr2:51833354-51833373 None:intergenic 80.0%
! AGGATGGGGGGGGGGGGGGG+GGG - Chr2:51833353-51833372 None:intergenic 85.0%
! GATGGGGGGGGGGGGGGGGG+GGG - Chr2:51833351-51833370 None:intergenic 90.0%
! GGATGGGGGGGGGGGGGGGG+GGG - Chr2:51833352-51833371 None:intergenic 90.0%
Chromosome Type Strat End Strand Name
Chr2 gene 51829448 51835143 51829448 ID=MsG0280009431.01;Name=MsG0280009431.01
Chr2 mRNA 51829448 51835143 51829448 ID=MsG0280009431.01.T01;Parent=MsG0280009431.01;Name=MsG0280009431.01.T01;_AED=0.46;_eAED=0.46;_QI=46|0.85|0.87|1|0.85|0.87|8|143|336
Chr2 exon 51829448 51829788 51829448 ID=MsG0280009431.01.T01:exon:9118;Parent=MsG0280009431.01.T01
Chr2 exon 51829873 51829937 51829873 ID=MsG0280009431.01.T01:exon:9119;Parent=MsG0280009431.01.T01
Chr2 exon 51831084 51831143 51831084 ID=MsG0280009431.01.T01:exon:9120;Parent=MsG0280009431.01.T01
Chr2 exon 51831386 51831463 51831386 ID=MsG0280009431.01.T01:exon:9121;Parent=MsG0280009431.01.T01
Chr2 exon 51832127 51832256 51832127 ID=MsG0280009431.01.T01:exon:9122;Parent=MsG0280009431.01.T01
Chr2 exon 51832638 51832690 51832638 ID=MsG0280009431.01.T01:exon:9123;Parent=MsG0280009431.01.T01
Chr2 exon 51833814 51833987 51833814 ID=MsG0280009431.01.T01:exon:9124;Parent=MsG0280009431.01.T01
Chr2 exon 51834845 51835143 51834845 ID=MsG0280009431.01.T01:exon:9125;Parent=MsG0280009431.01.T01
Chr2 five_prime_UTR 51829448 51829493 51829448 ID=MsG0280009431.01.T01:five_prime_utr;Parent=MsG0280009431.01.T01
Chr2 CDS 51829494 51829788 51829494 ID=MsG0280009431.01.T01:cds;Parent=MsG0280009431.01.T01
Chr2 CDS 51829873 51829937 51829873 ID=MsG0280009431.01.T01:cds;Parent=MsG0280009431.01.T01
Chr2 CDS 51831084 51831143 51831084 ID=MsG0280009431.01.T01:cds;Parent=MsG0280009431.01.T01
Chr2 CDS 51831386 51831463 51831386 ID=MsG0280009431.01.T01:cds;Parent=MsG0280009431.01.T01
Chr2 CDS 51832127 51832256 51832127 ID=MsG0280009431.01.T01:cds;Parent=MsG0280009431.01.T01
Chr2 CDS 51832638 51832690 51832638 ID=MsG0280009431.01.T01:cds;Parent=MsG0280009431.01.T01
Chr2 CDS 51833814 51833987 51833814 ID=MsG0280009431.01.T01:cds;Parent=MsG0280009431.01.T01
Chr2 CDS 51834845 51835000 51834845 ID=MsG0280009431.01.T01:cds;Parent=MsG0280009431.01.T01
Chr2 three_prime_UTR 51835001 51835143 51835001 ID=MsG0280009431.01.T01:three_prime_utr;Parent=MsG0280009431.01.T01
Gene Sequence

>MsG0280009431.01.T01

ATGAGAGGGTGCTGCTGCGTATTGCCATTTAGTTTTCCACATATTGCCATTGCTGTTTCTCATTCTCACTCTTTTACTATTCACACCCCAACACTAAAACCAATACTCTCCTCTATCCATAATCGTCCATTCTCTCCAACTTCACTTCATTCCCAACATCAACAGCCACATCATGATCAAGAAGAAGAAGACGAAGAAGAAAGCTTTCAAGTTTTAACATCTGTTAAAACTGATTACAATCATATCATGATTGTTGATACCCCTAAATCTAGAATGCTTTTCCTTGATTCATCTCATAATGTTCATAGCATTCTTTATAAGGACAAAAAGTGGACTAATTCCTGCTGGGTATGTTTGTTTGATGAGTTTGCCAGCTTGCCAGCCATTGTTCCAAAAGGTCCCATTGCTATCTTAGGTTTGGGTGGTGGAACTGCCGCTCATCTGATGCTTGAATTGTGGCCGGCACTGCACCTGGAAGGCTGGGAGATTGATGACATTTTGATCGATAAAGCAAGAGATTATTTTGGCTTATCTGATCTGGAGAAGACAAACAAAGATGGCGGCATTCTAAATGTTCATATTGGCGATGCCTTCATTCCATCAGAGGATTTGCACAGAAGATATGCCGGAATTGTGGTTGACTTGTTCTCTGACGGAAAAGTTTTGCCTCAGCTGCAAGAGGTTAGTACTTGGTTGGAATTACATGATAGATTGATGGCCAATGGTCGTTTTATGGTGAACTGCGGCGGGATCGATGGGGTGGATGGAAGTACTGATCCAAAAAAATTATCAAATGACGAGGCATGGTTATTAAATGCTGCAATCAAAGCATTATCCAAAGCATTTCCTGGACAACTAAATTGGAAGAGAATGCCGAAGGAAACGGGTGAGAATTTTATGGCACTTACAGGACCTTTACCTGATCTGAAATCTTGGTCTGCTAATGTCCCATCTCCTTTAAGCACAGGAGTGATGGATTGGAAACCTTGTGAAATAGTTTCTAGAATTTGA

Protein sequence

>MsG0280009431.01.T01

MRGCCCVLPFSFPHIAIAVSHSHSFTIHTPTLKPILSSIHNRPFSPTSLHSQHQQPHHDQEEEDEEESFQVLTSVKTDYNHIMIVDTPKSRMLFLDSSHNVHSILYKDKKWTNSCWVCLFDEFASLPAIVPKGPIAILGLGGGTAAHLMLELWPALHLEGWEIDDILIDKARDYFGLSDLEKTNKDGGILNVHIGDAFIPSEDLHRRYAGIVVDLFSDGKVLPQLQEVSTWLELHDRLMANGRFMVNCGGIDGVDGSTDPKKLSNDEAWLLNAAIKALSKAFPGQLNWKRMPKETGENFMALTGPLPDLKSWSANVPSPLSTGVMDWKPCEIVSRI*