AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580029719.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029719.01.T01 MTR_5g091340 91.845 515 38 2 440 950 544 1058 0.0 954
MsG0580029719.01.T01 MTR_5g091340 98.157 434 8 0 1 434 1 434 0.0 877
MsG0580029719.01.T01 MTR_3g047380 72.832 519 125 6 439 949 536 1046 0.0 754
MsG0580029719.01.T01 MTR_3g047380 81.319 455 77 4 1 454 1 448 0.0 754
MsG0580029719.01.T01 MTR_4g115620 63.111 450 152 7 1 445 1 441 0.0 564
MsG0580029719.01.T01 MTR_4g115620 44.106 526 253 12 444 941 537 1049 2.34e-127 411
MsG0580029719.01.T01 MTR_3g064610 25.738 237 131 10 171 393 286 491 3.03e-12 71.2
MsG0580029719.01.T01 MTR_6g478000 22.889 450 250 23 171 570 285 687 2.21e-11 68.6
MsG0580029719.01.T01 MTR_6g478030 24.229 227 147 8 171 393 1047 1252 6.11e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029719.01.T01 AT1G04920 78.876 445 89 3 1 443 1 442 0.0 720
MsG0580029719.01.T01 AT1G04920 60.038 523 190 10 440 947 542 1060 0.0 628
MsG0580029719.01.T01 AT5G20280 66.441 444 141 5 1 441 1 439 0.0 604
MsG0580029719.01.T01 AT5G20280 42.524 515 268 12 444 944 538 1038 1.87e-122 398
MsG0580029719.01.T01 AT4G10120 63.057 471 141 5 1 445 1 464 0.0 572
MsG0580029719.01.T01 AT4G10120 43.738 503 254 8 435 932 556 1034 5.30e-129 416
MsG0580029719.01.T01 AT4G10120 63.057 471 141 5 1 445 1 464 0.0 572
MsG0580029719.01.T01 AT4G10120 43.738 503 254 8 435 932 556 1034 5.30e-129 416
MsG0580029719.01.T01 AT4G10120 63.057 471 141 5 1 445 1 464 0.0 572
MsG0580029719.01.T01 AT4G10120 43.738 503 254 8 435 932 556 1034 5.30e-129 416
MsG0580029719.01.T01 AT5G11110 64.399 441 146 6 1 434 1 437 0.0 558
MsG0580029719.01.T01 AT5G11110 42.830 523 271 10 439 947 535 1043 1.58e-124 404
MsG0580029719.01.T01 AT4G10120 71.380 297 77 2 150 445 1 290 9.32e-134 424
MsG0580029719.01.T01 AT4G10120 43.825 502 253 8 435 931 382 859 2.19e-130 415
MsG0580029719.01.T01 AT4G10120 43.825 502 253 8 435 931 355 832 1.62e-130 414
MsG0580029719.01.T01 AT4G10120 73.704 270 64 1 176 445 1 263 3.68e-125 400
MsG0580029719.01.T01 AT4G02280 27.074 229 138 10 171 393 281 486 3.76e-11 67.8

Find 240 sgRNAs with CRISPR-Local

Find 354 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACAGTGCTGCTCTTCTTTC+AGG 0.121381 5:+101131495 MsG0580029719.01.T01:CDS
AGAACATGTGTTGGCGTATT+TGG 0.175840 5:+101130038 MsG0580029719.01.T01:CDS
TTCATTCACTTGAACATTTC+CGG 0.194078 5:-101133949 None:intergenic
CCTCAAACTGCAAGAGTTTC+GGG 0.218308 5:+101133873 MsG0580029719.01.T01:CDS
TCAGATTGTCTATGATGTTT+AGG 0.234949 5:-101132836 None:intergenic
TTGAAGCAACTTTCAAAATC+TGG 0.246308 5:+101134897 MsG0580029719.01.T01:CDS
TGCATTCTTACCGCCATTCT+AGG 0.250617 5:-101131807 None:intergenic
GATTACGAGGAAATGATTTC+TGG 0.266581 5:+101134717 MsG0580029719.01.T01:CDS
CAAAGAAAGGTTGTGATTAA+TGG 0.273077 5:+101129775 MsG0580029719.01.T01:exon
TCCCTTAGGCTTTCAATTGA+TGG 0.275388 5:+101133600 MsG0580029719.01.T01:CDS
CAATATCAGGAGATGATATT+TGG 0.291054 5:-101131191 None:intergenic
CAGATTGTCTATGATGTTTA+GGG 0.292808 5:-101132835 None:intergenic
CCCTCAAACTGCAAGAGTTT+CGG 0.299924 5:+101133872 MsG0580029719.01.T01:CDS
CAAACAAATACCCTCTATTA+AGG 0.300652 5:+101133739 MsG0580029719.01.T01:CDS
AATATGGTCTGATGATAAAA+AGG 0.307414 5:+101130541 MsG0580029719.01.T01:CDS
CATGAAAGGAGTTGTGTCTA+AGG 0.320713 5:+101134758 MsG0580029719.01.T01:CDS
TCATCTCTTTGGTAGCTTCC+TGG 0.321337 5:-101134804 None:intergenic
AGGATCTCCATTACTTTCAT+AGG 0.326213 5:-101133796 None:intergenic
TCTTCAACAAAGTACTTTGT+TGG 0.326350 5:-101129923 None:intergenic
ATCTCAATCAACTTCTTATC+AGG 0.328143 5:-101133816 None:intergenic
GAGAAAAGGGAGATGGCATT+GGG 0.330516 5:+101130459 MsG0580029719.01.T01:CDS
TTCAATTTCCATTCTATACT+TGG 0.339555 5:-101134992 None:intergenic
AACTTTATATTATCCTCTTA+AGG 0.347172 5:+101130570 MsG0580029719.01.T01:CDS
GCAAACATGTATGTCATTCT+TGG 0.348150 5:+101134678 MsG0580029719.01.T01:CDS
TCCTGCTTTAGTGAACCTTT+TGG 0.348825 5:+101132990 MsG0580029719.01.T01:CDS
ATTGACAAATATGACCTATA+TGG 0.348936 5:+101132800 MsG0580029719.01.T01:CDS
GTCTTTCAATGATTCACTTA+AGG 0.350306 5:+101133563 MsG0580029719.01.T01:CDS
TCGGACCGGTTGACATTAAT+CGG 0.352075 5:+101133149 MsG0580029719.01.T01:CDS
TTGGCACAACATCATCTCTT+TGG 0.357644 5:-101134815 None:intergenic
CACATTCAAGAATTTGTAGA+TGG 0.366199 5:+101131366 MsG0580029719.01.T01:CDS
GCTGGTAATGAGTGGATTAA+TGG 0.367627 5:+101129797 MsG0580029719.01.T01:CDS
ATGCTTCTAGCCAGGAAATA+TGG 0.370871 5:+101130525 MsG0580029719.01.T01:CDS
CCATAGCTCCAATCAATATC+AGG 0.371116 5:-101131204 None:intergenic
CCCGAAACTCTTGCAGTTTG+AGG 0.372398 5:-101133873 None:intergenic
TATCATCAGACCATATTTCC+TGG 0.374293 5:-101130535 None:intergenic
CTCAACATGTCAAAAGTATT+GGG 0.379807 5:+101131405 MsG0580029719.01.T01:CDS
TAAGAATAATATACCTTAAG+AGG 0.382181 5:-101130583 None:intergenic
TCTGCCTGATCAAGATTATT+CGG 0.383066 5:+101134043 MsG0580029719.01.T01:CDS
TCTTCATCGTACATGGCTTA+AGG 0.392250 5:+101129973 MsG0580029719.01.T01:CDS
TATCATCTCCTGATATTGAT+TGG 0.395461 5:+101131196 MsG0580029719.01.T01:CDS
GGAGAAAAGGGAGATGGCAT+TGG 0.398420 5:+101130458 MsG0580029719.01.T01:CDS
GGCTTATCTTTATGTAATGA+AGG 0.401769 5:-101129649 None:intergenic
TCTCAACATGTCAAAAGTAT+TGG 0.409967 5:+101131404 MsG0580029719.01.T01:CDS
GCAAGAAATTGACGAACAAT+GGG 0.412594 5:+101131698 MsG0580029719.01.T01:CDS
TTTATACAGTTTGCATGGAT+TGG 0.418964 5:+101130962 MsG0580029719.01.T01:intron
TTCTCCTTCCGACAACTCTT+CGG 0.419102 5:-101130441 None:intergenic
CTTGGTAGAGATTCTGATAC+TGG 0.420188 5:+101131005 MsG0580029719.01.T01:CDS
TTACCTTTCCAAGTATAGAA+TGG 0.425096 5:+101134984 MsG0580029719.01.T01:three_prime_UTR
GGTACATATAGATTATCGTT+GGG 0.425550 5:+101134064 MsG0580029719.01.T01:CDS
AGAGTTGTCGGAAGGAGAAA+AGG 0.429412 5:+101130445 MsG0580029719.01.T01:CDS
CCGAAACTCTTGCAGTTTGA+GGG 0.429535 5:-101133872 None:intergenic
ATGCTATAGTTTGTAGTAGT+GGG 0.429593 5:+101133976 MsG0580029719.01.T01:CDS
TAAATTTCACTTACCTTGCT+AGG 0.433136 5:-101134227 None:intergenic
TATGTCATTCTTGGAGAAAC+CGG 0.434715 5:+101134687 MsG0580029719.01.T01:CDS
CCGTCTTCTGTGTGAACACC+AGG 0.435238 5:-101134014 None:intergenic
AAGATAAGGAAGCAAGATTC+TGG 0.437232 5:+101133681 MsG0580029719.01.T01:CDS
GAAGAACTGCTTAGAGGTCC+AGG 0.441146 5:+101134786 MsG0580029719.01.T01:CDS
TGAAAGTTGCTTCAAAGCAT+TGG 0.442129 5:-101134889 None:intergenic
AAATAAGTTCGGCAGTGTTC+AGG 0.443986 5:-101133462 None:intergenic
GAACAATGGGGACTTTATGA+TGG 0.444187 5:+101131711 MsG0580029719.01.T01:CDS
CACCATCAATTGAAAGCCTA+AGG 0.446507 5:-101133602 None:intergenic
ATGATAGCACCGGAGAGAGC+AGG 0.446894 5:+101131274 MsG0580029719.01.T01:CDS
CACCCTTTGCTGCTCTTCAA+CGG 0.450640 5:-101129864 None:intergenic
CCAATTAAAGTAAGACCAAA+AGG 0.456297 5:-101133005 None:intergenic
ATCTCGAGAAAGAACTTCTC+TGG 0.456980 5:+101131340 MsG0580029719.01.T01:CDS
AGAAGCAGAGGAGCTTTCCT+TGG 0.461828 5:+101131644 MsG0580029719.01.T01:CDS
TGTTTCTGCACTCATGCCAT+AGG 0.464242 5:-101133407 None:intergenic
CCTGATATTGATTGGAGCTA+TGG 0.464378 5:+101131204 MsG0580029719.01.T01:CDS
TCTTCTTGCATCTAGAGCTC+AGG 0.469294 5:+101134512 MsG0580029719.01.T01:CDS
GTGTGGCCTTATGTGATTCA+TGG 0.471189 5:+101131453 MsG0580029719.01.T01:CDS
GATTATCGTTGGGGTGTTGA+AGG 0.471268 5:+101134074 MsG0580029719.01.T01:CDS
GCAACAAGAGGACTCTCATT+TGG 0.471297 5:-101134834 None:intergenic
ACCAAAAGGTTCACTAAAGC+AGG 0.471360 5:-101132991 None:intergenic
TCATCCTCATCATTATCATC+TGG 0.472516 5:-101131255 None:intergenic
AGTGTTCAGGCCACGAGAAA+AGG 0.473744 5:-101133449 None:intergenic
ATGACTTGAGGCAAAAGCTT+CGG 0.474230 5:+101134427 MsG0580029719.01.T01:CDS
TTTCCATTCTATACTTGGAA+AGG 0.480274 5:-101134987 None:intergenic
TTTCCGCAGGTTATCCCTCC+TGG 0.481354 5:+101132049 MsG0580029719.01.T01:intron
TGCAGCAAATCTATATATCC+AGG 0.483351 5:-101132863 None:intergenic
CTGCGCCTTCGCCTTAATAG+AGG 0.484197 5:-101133750 None:intergenic
CGGTACATATAGATTATCGT+TGG 0.487332 5:+101134063 MsG0580029719.01.T01:CDS
ACATTACATAATACAAAGAA+AGG 0.487580 5:+101129762 MsG0580029719.01.T01:five_prime_UTR
GGCAAGAAATTGACGAACAA+TGG 0.492826 5:+101131697 MsG0580029719.01.T01:CDS
TTAGGTATTTGTTCGTCCGT+TGG 0.493392 5:+101134643 MsG0580029719.01.T01:intron
GGTTCAGAAGAACTGCTTAG+AGG 0.494844 5:+101134780 MsG0580029719.01.T01:CDS
ATATGCACCCCTGCTCTCTC+CGG 0.497477 5:-101131283 None:intergenic
CTTGATTCCTATGAAAGTAA+TGG 0.497493 5:+101133789 MsG0580029719.01.T01:CDS
AATTGACGCCACGCCTATCA+CGG 0.500584 5:-101131767 None:intergenic
TGCTTAAGACACGTTTCACT+TGG 0.502370 5:-101133659 None:intergenic
AGTTGATATCCTCCCACGAT+TGG 0.502981 5:-101131596 None:intergenic
CCACCGTTGAAGAGCAGCAA+AGG 0.508053 5:+101129861 MsG0580029719.01.T01:CDS
GGATTTGTCCGAAGAGTTGT+CGG 0.508069 5:+101130433 MsG0580029719.01.T01:CDS
GACAAGTTCTGCAGCATCCA+AGG 0.508190 5:-101131661 None:intergenic
GCTATATTATCGACCGGTGG+TGG 0.511111 5:+101129830 MsG0580029719.01.T01:CDS
AACAATGGGGACTTTATGAT+GGG 0.512035 5:+101131712 MsG0580029719.01.T01:CDS
GTTCTCACTGGTCATTCACT+TGG 0.513001 5:+101131537 MsG0580029719.01.T01:CDS
GTTGTCATCCTATGTACTGC+AGG 0.513171 5:+101134463 MsG0580029719.01.T01:CDS
ATCTTTATGTAATGAAGGGA+AGG 0.514988 5:-101129644 None:intergenic
TGATAGCACCGGAGAGAGCA+GGG 0.515618 5:+101131275 MsG0580029719.01.T01:CDS
GAGTTGTCGGAAGGAGAAAA+GGG 0.516117 5:+101130446 MsG0580029719.01.T01:CDS
ATATTTATCGCGCGGACCGA+AGG 0.516895 5:-101131319 None:intergenic
TCAGAGGCATGCTTCTAGCC+AGG 0.517688 5:+101130517 MsG0580029719.01.T01:CDS
TTACCCCGATTAATGTCAAC+CGG 0.522736 5:-101133154 None:intergenic
TTCCTCGTAATCAGTGTCCC+CGG 0.523537 5:-101134706 None:intergenic
CCTTTGCTGCTCTTCAACGG+TGG 0.523692 5:-101129861 None:intergenic
AGAAAAGGGAGATGGCATTG+GGG 0.525201 5:+101130460 MsG0580029719.01.T01:CDS
TAGTGTCCATGAATCACATA+AGG 0.526558 5:-101131459 None:intergenic
TCTTGCTCGCAAGAAGAAGA+AGG 0.528534 5:+101130063 MsG0580029719.01.T01:CDS
AGATTCTGATACTGGTGGAC+AGG 0.528958 5:+101131013 MsG0580029719.01.T01:CDS
ACCCACTCAGGCAGCTGCAA+TGG 0.529124 5:+101133101 MsG0580029719.01.T01:intron
AGTCTGATCTTCATCGTACA+TGG 0.529444 5:+101129966 MsG0580029719.01.T01:CDS
ACAACGGAATTTCTAGCATC+CGG 0.529824 5:+101133930 MsG0580029719.01.T01:CDS
TGAAGAGCAGCAAAGGGTGG+CGG 0.531056 5:+101129868 MsG0580029719.01.T01:CDS
CTCTATTAAGGCGAAGGCGC+AGG 0.531101 5:+101133751 MsG0580029719.01.T01:CDS
CGGACCGGTTGACATTAATC+GGG 0.531432 5:+101133150 MsG0580029719.01.T01:CDS
CATAGACAATCTGATGTACC+TGG 0.531676 5:+101132845 MsG0580029719.01.T01:CDS
TGTACCGAATAATCTTGATC+AGG 0.532685 5:-101134047 None:intergenic
GATGCTATAGTTTGTAGTAG+TGG 0.535438 5:+101133975 MsG0580029719.01.T01:CDS
GGTATGCGACATGTCCATAT+AGG 0.536117 5:-101132814 None:intergenic
ATGTTCAAGACATGTCCCTT+AGG 0.538002 5:+101133586 MsG0580029719.01.T01:CDS
AAACTTATGAATGCCTCTAC+TGG 0.539303 5:+101134116 MsG0580029719.01.T01:CDS
TGGTCGTTACATGCCTAGAA+TGG 0.539666 5:+101131794 MsG0580029719.01.T01:CDS
CACAAGCAAACCATTGTTGA+GGG 0.539762 5:-101133325 None:intergenic
TTGTCATCCTATGTACTGCA+GGG 0.539881 5:+101134464 MsG0580029719.01.T01:CDS
GCGGCTGCAGCGAGAGAAAG+TGG 0.541974 5:+101129887 MsG0580029719.01.T01:CDS
AGGTGCTTTGAATGTGCCAA+TGG 0.542204 5:+101131515 MsG0580029719.01.T01:CDS
GAATGACCAGTGAGAACCAT+TGG 0.543147 5:-101131531 None:intergenic
TCTACTGGTGAAGAGACTAA+TGG 0.545770 5:+101134131 MsG0580029719.01.T01:CDS
ATTAGTCTCTTCACCAGTAG+AGG 0.546211 5:-101134129 None:intergenic
GAAAGGTTGTGATTAATGGC+TGG 0.547536 5:+101129779 MsG0580029719.01.T01:exon
CACCGTTGAAGAGCAGCAAA+GGG 0.549347 5:+101129862 MsG0580029719.01.T01:CDS
ATTCTCACAGATTAAATATG+TGG 0.550024 5:+101131107 MsG0580029719.01.T01:intron
ATGTCATTCTTGGAGAAACC+GGG 0.550941 5:+101134688 MsG0580029719.01.T01:CDS
AAAGTATTGGGTGAACAAGT+TGG 0.551912 5:+101131417 MsG0580029719.01.T01:CDS
CCTGGTGTTCACACAGAAGA+CGG 0.553137 5:+101134014 MsG0580029719.01.T01:CDS
CATCTAGAGCTCAGGCACTC+AGG 0.554105 5:+101134520 MsG0580029719.01.T01:CDS
CGAGGAGAAAACATGGAGCT+TGG 0.556627 5:+101130987 MsG0580029719.01.T01:CDS
CCACGCGTGTCAAATAAGTT+CGG 0.557990 5:-101133473 None:intergenic
TTAAGCAAGGGCGCCAATCG+TGG 0.560333 5:+101131583 MsG0580029719.01.T01:CDS
TATTTATCGCGCGGACCGAA+GGG 0.560973 5:-101131318 None:intergenic
CTTGAACAACTTCTTAAGCA+AGG 0.561284 5:+101131570 MsG0580029719.01.T01:CDS
CCTCAACAATGGTTTGCTTG+TGG 0.561331 5:+101133326 MsG0580029719.01.T01:CDS
AGGCAAAAGCTTCGGATGAG+AGG 0.562981 5:+101134435 MsG0580029719.01.T01:CDS
TTGTTGCCACTCGTAATACA+AGG 0.564168 5:+101129996 MsG0580029719.01.T01:CDS
CATGGACACTATGCTGATGC+TGG 0.565070 5:+101131471 MsG0580029719.01.T01:CDS
ATTGACGCCACGCCTATCAC+GGG 0.565168 5:-101131766 None:intergenic
GACTTCAAATCTTCCTCAAG+AGG 0.566808 5:-101134167 None:intergenic
GGTGGTTGAAGCACCACCAC+CGG 0.568489 5:-101129843 None:intergenic
CTGGTGTTCACACAGAAGAC+GGG 0.569189 5:+101134015 MsG0580029719.01.T01:CDS
AACGTGTCTTAAGCAAGATA+AGG 0.570558 5:+101133667 MsG0580029719.01.T01:CDS
TTGAACAACTTCTTAAGCAA+GGG 0.572319 5:+101131571 MsG0580029719.01.T01:CDS
CACAAGACTATAATCATGAA+AGG 0.574224 5:+101134744 MsG0580029719.01.T01:CDS
AATGATGAGGATGATAGCAC+CGG 0.578093 5:+101131264 MsG0580029719.01.T01:CDS
GCTTATCTTTATGTAATGAA+GGG 0.579072 5:-101129648 None:intergenic
CCTACAGAAATGCTATCTGC+AGG 0.579559 5:+101131231 MsG0580029719.01.T01:CDS
TCTTTATGTAATGAAGGGAA+GGG 0.581147 5:-101129643 None:intergenic
CAAAATAAATGATCCTAGCA+AGG 0.584156 5:+101134214 MsG0580029719.01.T01:CDS
ATGCATACTTTATAGGTGGA+AGG 0.585802 5:+101130344 MsG0580029719.01.T01:intron
TTGCGTGCCCGTGATAGGCG+TGG 0.587334 5:+101131759 MsG0580029719.01.T01:CDS
TAATGTTAGGCCCTCAACAA+TGG 0.587618 5:+101133315 MsG0580029719.01.T01:intron
AAGCAACTTTCAAAATCTGG+AGG 0.587763 5:+101134900 MsG0580029719.01.T01:CDS
CCGAACTTATTTGACACGCG+TGG 0.589671 5:+101133473 MsG0580029719.01.T01:CDS
TTGCAACATTTAATCTCCAA+CGG 0.590507 5:-101134659 None:intergenic
AGGCGTGGCGTCAATTGTCA+TGG 0.590517 5:+101131774 MsG0580029719.01.T01:CDS
TATAGATTTGCTGCAAAACA+AGG 0.591412 5:+101132871 MsG0580029719.01.T01:CDS
TTGGGTGAACAAGTTGGCGG+TGG 0.592215 5:+101131423 MsG0580029719.01.T01:CDS
TCTACAAATTCTTGAATGTG+AGG 0.592308 5:-101131363 None:intergenic
ATGAAAGGAGTTGTGTCTAA+GGG 0.592431 5:+101134759 MsG0580029719.01.T01:CDS
GGGAGTGAAGTTTATTACCC+TGG 0.593208 5:+101133996 MsG0580029719.01.T01:CDS
CAGCTGCAATGGACTGCCAA+TGG 0.593487 5:+101133112 MsG0580029719.01.T01:intron
GCGTGGATGCGTGTAGAATG+AGG 0.594241 5:+101133490 MsG0580029719.01.T01:CDS
TGGAAGGAGAAGAACTTCAA+AGG 0.594294 5:+101130360 MsG0580029719.01.T01:CDS
TTGTCCGAAGAGTTGTCGGA+AGG 0.594632 5:+101130437 MsG0580029719.01.T01:CDS
GTAGTAGTAGTTTGCCATTG+TGG 0.595018 5:-101133516 None:intergenic
TAAGCAAGGGCGCCAATCGT+GGG 0.595077 5:+101131584 MsG0580029719.01.T01:CDS
CCTGCAGATAGCATTTCTGT+AGG 0.597226 5:-101131231 None:intergenic
TGCGCCTTCGCCTTAATAGA+GGG 0.598404 5:-101133749 None:intergenic
TCACTAATGCATGCAACAAG+AGG 0.598435 5:-101134846 None:intergenic
GGAAATAGAACAAGGACGTA+GGG 0.600129 5:+101130400 MsG0580029719.01.T01:CDS
CTTGAGGCTATATTATCGAC+CGG 0.601768 5:+101129824 MsG0580029719.01.T01:CDS
TATACATCGTTCATTGCATG+TGG 0.602722 5:+101129595 None:intergenic
AAGGTTAGCATACAGACGAT+GGG 0.603313 5:+101130379 MsG0580029719.01.T01:CDS
TTCTCGAGATATTTATCGCG+CGG 0.603677 5:-101131327 None:intergenic
TGAGCTCTAGATGCAAGAAG+AGG 0.603752 5:-101134510 None:intergenic
TATATCATAAGAATACCCTT+CGG 0.604189 5:+101131303 MsG0580029719.01.T01:CDS
TCGGAAGGAGAAAAGGGAGA+TGG 0.607859 5:+101130452 MsG0580029719.01.T01:CDS
CCACAAGCAAACCATTGTTG+AGG 0.608970 5:-101133326 None:intergenic
AATACCCTCTATTAAGGCGA+AGG 0.608972 5:+101133745 MsG0580029719.01.T01:CDS
AGTTGATTGAGATAGTTCAA+AGG 0.609184 5:+101133826 MsG0580029719.01.T01:CDS
AATGAGAAGGATAGAAGCAG+AGG 0.609302 5:+101131632 MsG0580029719.01.T01:CDS
CAAGGAAGGTTGATGACTTG+AGG 0.610043 5:+101134415 MsG0580029719.01.T01:CDS
AATGGTGGCCACTAAAATGT+CGG 0.611337 5:+101133130 MsG0580029719.01.T01:CDS
GTACATATAGATTATCGTTG+GGG 0.611375 5:+101134065 MsG0580029719.01.T01:CDS
GGGAAATAGAACAAGGACGT+AGG 0.612480 5:+101130399 MsG0580029719.01.T01:CDS
AATGTGCCAATGGTTCTCAC+TGG 0.613125 5:+101131525 MsG0580029719.01.T01:CDS
CAAGACTCGAGAACATGTGT+TGG 0.613633 5:+101130029 MsG0580029719.01.T01:CDS
TGTCATCCTATGTACTGCAG+GGG 0.617290 5:+101134465 MsG0580029719.01.T01:CDS
AAAGGTTAGCATACAGACGA+TGG 0.619375 5:+101130378 MsG0580029719.01.T01:CDS
GCAATTGCTTGATGATCATG+AGG 0.622487 5:-101133351 None:intergenic
AACAGCAACTAGTCCTCTTG+AGG 0.624548 5:+101134154 MsG0580029719.01.T01:CDS
TGGCCACTAAAATGTCGGAC+CGG 0.628476 5:+101133135 MsG0580029719.01.T01:CDS
AACTTGTCATCACTAGTACA+AGG 0.634602 5:+101131676 MsG0580029719.01.T01:CDS
ACCATCAATTGAAAGCCTAA+GGG 0.635336 5:-101133601 None:intergenic
CGTTGAAGAGCAGCAAAGGG+TGG 0.640548 5:+101129865 MsG0580029719.01.T01:CDS
CTGCAATGGACTGCCAATGG+TGG 0.642201 5:+101133115 MsG0580029719.01.T01:CDS
GCAAGGGCGCCAATCGTGGG+AGG 0.643681 5:+101131587 MsG0580029719.01.T01:CDS
AACCGGGGACACTGATTACG+AGG 0.645232 5:+101134704 MsG0580029719.01.T01:CDS
GTATTGGGTGAACAAGTTGG+CGG 0.646506 5:+101131420 MsG0580029719.01.T01:CDS
CGGTCGATAATATAGCCTCA+AGG 0.646671 5:-101129823 None:intergenic
ACGTTCCCTTGTATTACGAG+TGG 0.651461 5:-101130002 None:intergenic
TTGCTGAGTCCATACCAGGA+GGG 0.653703 5:-101132063 None:intergenic
CAACGTATAAGATAATGAGA+AGG 0.658712 5:+101131619 MsG0580029719.01.T01:CDS
ATGAGTGCAGAAACAATGGT+TGG 0.659698 5:+101133415 MsG0580029719.01.T01:CDS
ATTGGTACGAGGAGAAAACA+TGG 0.659978 5:+101130980 MsG0580029719.01.T01:CDS
GATTAATGGCTGGTAATGAG+TGG 0.660879 5:+101129789 MsG0580029719.01.T01:exon
GGTAGAGATTCTGATACTGG+TGG 0.661211 5:+101131008 MsG0580029719.01.T01:CDS
TGAATCACATAAGGCCACAC+AGG 0.666294 5:-101131450 None:intergenic
AGGACGTAGGGATGCAACAG+AGG 0.666641 5:+101130412 MsG0580029719.01.T01:CDS
CATGTTGAGAATGTGAGCTA+AGG 0.670102 5:-101131391 None:intergenic
GTCATCCTATGTACTGCAGG+GGG 0.673599 5:+101134466 MsG0580029719.01.T01:CDS
AGACGATGGGAAATAGAACA+AGG 0.673883 5:+101130392 MsG0580029719.01.T01:CDS
TGGCATGAGTGCAGAAACAA+TGG 0.674469 5:+101133411 MsG0580029719.01.T01:CDS
AGTTTGCATGGATTGGTACG+AGG 0.674490 5:+101130969 MsG0580029719.01.T01:intron
GTAGAATGAGGCATCCACAA+TGG 0.679184 5:+101133502 MsG0580029719.01.T01:CDS
GAGGCTATATTATCGACCGG+TGG 0.680189 5:+101129827 MsG0580029719.01.T01:CDS
TCGTTACATGCCTAGAATGG+CGG 0.685556 5:+101131797 MsG0580029719.01.T01:CDS
TGAATGTTACATGATCGACA+TGG 0.686618 5:-101129670 None:intergenic
GAATTTGCTGCATCAAGCGG+TGG 0.686684 5:+101133624 MsG0580029719.01.T01:CDS
GGTGAATTTGCTGCATCAAG+CGG 0.687360 5:+101133621 MsG0580029719.01.T01:CDS
GTGGATTAATGGCTACCTTG+AGG 0.690844 5:+101129808 MsG0580029719.01.T01:CDS
TATGACAATGCAAGAAACAA+CGG 0.693451 5:+101133914 MsG0580029719.01.T01:CDS
GATAGCACCGGAGAGAGCAG+GGG 0.693560 5:+101131276 MsG0580029719.01.T01:CDS
CGTCTTCTGTGTGAACACCA+GGG 0.693652 5:-101134013 None:intergenic
GGACCGGTTGACATTAATCG+GGG 0.711956 5:+101133151 MsG0580029719.01.T01:CDS
TGTCATTCTTGGAGAAACCG+GGG 0.712395 5:+101134689 MsG0580029719.01.T01:CDS
ATGCATTAGTGAAACAACAG+AGG 0.717974 5:+101134857 MsG0580029719.01.T01:CDS
TTGGCGGTGGACAACCTGTG+TGG 0.719682 5:+101131436 MsG0580029719.01.T01:CDS
AGGTCCAGATGATAATGATG+AGG 0.720340 5:+101131251 MsG0580029719.01.T01:CDS
TGTTGCCACTCGTAATACAA+GGG 0.724087 5:+101129997 MsG0580029719.01.T01:CDS
CAAGAAATTGACGAACAATG+GGG 0.742041 5:+101131699 MsG0580029719.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGATATCAATTAATAATA+AGG - Chr5:101130873-101130892 None:intergenic 10.0%
!! AATACTAATATTTCAAAGTT+TGG + Chr5:101132417-101132436 MsG0580029719.01.T01:intron 15.0%
!! ATTATTATTAACTAAATGAG+AGG - Chr5:101131074-101131093 None:intergenic 15.0%
!! GTTTATTATTTAAATGTGTT+AGG + Chr5:101134625-101134644 MsG0580029719.01.T01:intron 15.0%
!! TTAATTGATATGTATGATAT+AGG - Chr5:101131919-101131938 None:intergenic 15.0%
!! TTATTATTAACTAAATGAGA+GGG - Chr5:101131073-101131092 None:intergenic 15.0%
!!! AACACTTAAATTAATTTGTT+TGG + Chr5:101130274-101130293 MsG0580029719.01.T01:intron 15.0%
!!! CAATTAATTCATACTATTTT+AGG + Chr5:101131932-101131951 MsG0580029719.01.T01:intron 15.0%
!!! TTAAATTAATTTGTTTGGAT+TGG + Chr5:101130279-101130298 MsG0580029719.01.T01:intron 15.0%
!! AAAATATCAAACTAGTTAGT+TGG - Chr5:101132952-101132971 None:intergenic 20.0%
!! AAACACTCATAAAATTTAGA+AGG - Chr5:101130247-101130266 None:intergenic 20.0%
!! AACTTTATATTATCCTCTTA+AGG + Chr5:101130570-101130589 MsG0580029719.01.T01:CDS 20.0%
!! ACATTACATAATACAAAGAA+AGG + Chr5:101129762-101129781 MsG0580029719.01.T01:five_prime_UTR 20.0%
!! TAAGAATAATATACCTTAAG+AGG - Chr5:101130586-101130605 None:intergenic 20.0%
!! TCAAACATTTATGTATATGA+TGG - Chr5:101130158-101130177 None:intergenic 20.0%
!!! TGAATACTATGGAAATTTTA+TGG - Chr5:101134595-101134614 None:intergenic 20.0%
!!! TGATTCTTTGTTATAATGTT+AGG + Chr5:101133302-101133321 MsG0580029719.01.T01:intron 20.0%
!!! TTCTATAAATTGTTCGTTTT+AGG + Chr5:101134392-101134411 MsG0580029719.01.T01:intron 20.0%
! AAGAACATAACAACTCTTAA+AGG + Chr5:101132574-101132593 MsG0580029719.01.T01:intron 25.0%
! AATATGGTCTGATGATAAAA+AGG + Chr5:101130541-101130560 MsG0580029719.01.T01:CDS 25.0%
! ACTAATATTTCAAAGTTTGG+AGG + Chr5:101132420-101132439 MsG0580029719.01.T01:intron 25.0%
! ACTAATGATGCATACTTTAT+AGG + Chr5:101130337-101130356 MsG0580029719.01.T01:intron 25.0%
! AGGTATATTATTCTTAGACT+CGG + Chr5:101130590-101130609 MsG0580029719.01.T01:intron 25.0%
! AGTGTAGATCAAAATATCTT+AGG + Chr5:101132313-101132332 MsG0580029719.01.T01:intron 25.0%
! ATTCTCACAGATTAAATATG+TGG + Chr5:101131107-101131126 MsG0580029719.01.T01:intron 25.0%
! ATTGACAAATATGACCTATA+TGG + Chr5:101132800-101132819 MsG0580029719.01.T01:CDS 25.0%
! CAGTACAAGTTGTAAAATAT+AGG - Chr5:101133238-101133257 None:intergenic 25.0%
! CATTCAAATTCTGAATACTA+TGG - Chr5:101134606-101134625 None:intergenic 25.0%
! GCTTATCTTTATGTAATGAA+GGG - Chr5:101129651-101129670 None:intergenic 25.0%
! GCTTTCACAATAGTAATATT+AGG - Chr5:101130896-101130915 None:intergenic 25.0%
! GTGTAGATCAAAATATCTTA+GGG + Chr5:101132314-101132333 MsG0580029719.01.T01:intron 25.0%
! TATACAGTGATAATATGTGT+TGG + Chr5:101132201-101132220 MsG0580029719.01.T01:intron 25.0%
! TATATCAGTTATCTCTTTGA+TGG + Chr5:101131996-101132015 MsG0580029719.01.T01:intron 25.0%
! TATATCATAAGAATACCCTT+CGG + Chr5:101131303-101131322 MsG0580029719.01.T01:CDS 25.0%
! TCACCAAATTCATACAATAA+AGG - Chr5:101130305-101130324 None:intergenic 25.0%
! TCCTTCAATTAACAATTCTT+AGG - Chr5:101132257-101132276 None:intergenic 25.0%
! TGTAGATCAAAATATCTTAG+GGG + Chr5:101132315-101132334 MsG0580029719.01.T01:intron 25.0%
! TTCAATTTCCATTCTATACT+TGG - Chr5:101134995-101135014 None:intergenic 25.0%
! TTTCTAAACAGACCTTATAA+TGG + Chr5:101132710-101132729 MsG0580029719.01.T01:intron 25.0%
! TTTGTGACATAGTAATTCTT+TGG - Chr5:101132373-101132392 None:intergenic 25.0%
!! AAAGTTGTTACTTACAAGAT+TGG - Chr5:101132629-101132648 None:intergenic 25.0%
!! GTATGTTGATGAATGAAAAT+TGG - Chr5:101130122-101130141 None:intergenic 25.0%
!!! CTTTTGGTCTTACTTTAATT+GGG + Chr5:101133006-101133025 MsG0580029719.01.T01:CDS 25.0%
AAAATGTGAAATGTCACCAA+AGG - Chr5:101133050-101133069 None:intergenic 30.0%
AAATGTGAAATGTCACCAAA+GGG - Chr5:101133049-101133068 None:intergenic 30.0%
AATGATGCATACTTTATAGG+TGG + Chr5:101130340-101130359 MsG0580029719.01.T01:intron 30.0%
ACATAGAAGATATGTCTTCT+GGG + Chr5:101132743-101132762 MsG0580029719.01.T01:intron 30.0%
AGTTGATTGAGATAGTTCAA+AGG + Chr5:101133826-101133845 MsG0580029719.01.T01:CDS 30.0%
ATAACAACTCTTAAAGGCTT+TGG + Chr5:101132580-101132599 MsG0580029719.01.T01:intron 30.0%
ATCTCAATCAACTTCTTATC+AGG - Chr5:101133819-101133838 None:intergenic 30.0%
ATCTTTATGTAATGAAGGGA+AGG - Chr5:101129647-101129666 None:intergenic 30.0%
CAAAATAAATGATCCTAGCA+AGG + Chr5:101134214-101134233 MsG0580029719.01.T01:CDS 30.0%
CAAACAAATACCCTCTATTA+AGG + Chr5:101133739-101133758 MsG0580029719.01.T01:CDS 30.0%
CAAAGAAAGGTTGTGATTAA+TGG + Chr5:101129775-101129794 MsG0580029719.01.T01:exon 30.0%
CAACGTATAAGATAATGAGA+AGG + Chr5:101131619-101131638 MsG0580029719.01.T01:CDS 30.0%
CAATATCAGGAGATGATATT+TGG - Chr5:101131194-101131213 None:intergenic 30.0%
CACAAGACTATAATCATGAA+AGG + Chr5:101134744-101134763 MsG0580029719.01.T01:CDS 30.0%
CACATTCAAGAATTTGTAGA+TGG + Chr5:101131366-101131385 MsG0580029719.01.T01:CDS 30.0%
CAGATTGTCTATGATGTTTA+GGG - Chr5:101132838-101132857 None:intergenic 30.0%
CCAATTAAAGTAAGACCAAA+AGG - Chr5:101133008-101133027 None:intergenic 30.0%
CTAGTATGAACATTGTAACT+CGG - Chr5:101133209-101133228 None:intergenic 30.0%
CTTAGTTGTAATCAAGACAT+TGG + Chr5:101133262-101133281 MsG0580029719.01.T01:intron 30.0%
CTTGATTCCTATGAAAGTAA+TGG + Chr5:101133789-101133808 MsG0580029719.01.T01:CDS 30.0%
GCCTAAGAATTGTTAATTGA+AGG + Chr5:101132253-101132272 MsG0580029719.01.T01:intron 30.0%
GCTATTTGCAATTATTATCG+TGG + Chr5:101130713-101130732 MsG0580029719.01.T01:intron 30.0%
GCTTGTACAATAAACACTTA+TGG - Chr5:101130648-101130667 None:intergenic 30.0%
GGCTTATCTTTATGTAATGA+AGG - Chr5:101129652-101129671 None:intergenic 30.0%
GGTACATATAGATTATCGTT+GGG + Chr5:101134064-101134083 MsG0580029719.01.T01:CDS 30.0%
GTACATATAGATTATCGTTG+GGG + Chr5:101134065-101134084 MsG0580029719.01.T01:CDS 30.0%
GTCTTTCAATGATTCACTTA+AGG + Chr5:101133563-101133582 MsG0580029719.01.T01:CDS 30.0%
TAAATTTCACTTACCTTGCT+AGG - Chr5:101134230-101134249 None:intergenic 30.0%
TATATAATCAATGCCACACT+TGG + Chr5:101132648-101132667 MsG0580029719.01.T01:intron 30.0%
TATCATCTCCTGATATTGAT+TGG + Chr5:101131196-101131215 MsG0580029719.01.T01:CDS 30.0%
TATGACAATGCAAGAAACAA+CGG + Chr5:101133914-101133933 MsG0580029719.01.T01:CDS 30.0%
TCAAGTCAATAACAGTACTA+AGG - Chr5:101132472-101132491 None:intergenic 30.0%
TCACTTCTAAACCAAATTGA+AGG - Chr5:101132175-101132194 None:intergenic 30.0%
TCAGATTGTCTATGATGTTT+AGG - Chr5:101132839-101132858 None:intergenic 30.0%
TCTACAAATTCTTGAATGTG+AGG - Chr5:101131366-101131385 None:intergenic 30.0%
TCTTTATGTAATGAAGGGAA+GGG - Chr5:101129646-101129665 None:intergenic 30.0%
TGGCCTTTATTGTATGAATT+TGG + Chr5:101130299-101130318 MsG0580029719.01.T01:intron 30.0%
TGTTATCAGAGAAAAACCTA+TGG + Chr5:101133391-101133410 MsG0580029719.01.T01:CDS 30.0%
TTACCTTTCCAAGTATAGAA+TGG + Chr5:101134984-101135003 MsG0580029719.01.T01:three_prime_UTR 30.0%
TTCATTCACTTGAACATTTC+CGG - Chr5:101133952-101133971 None:intergenic 30.0%
TTGAACAACTTCTTAAGCAA+GGG + Chr5:101131571-101131590 MsG0580029719.01.T01:CDS 30.0%
TTGAAGCAACTTTCAAAATC+TGG + Chr5:101134897-101134916 MsG0580029719.01.T01:CDS 30.0%
TTGCAACATTTAATCTCCAA+CGG - Chr5:101134662-101134681 None:intergenic 30.0%
TTTATACAGTTTGCATGGAT+TGG + Chr5:101130962-101130981 MsG0580029719.01.T01:intron 30.0%
TTTCCATTCTATACTTGGAA+AGG - Chr5:101134990-101135009 None:intergenic 30.0%
! ATGCTATAGTTTGTAGTAGT+GGG + Chr5:101133976-101133995 MsG0580029719.01.T01:CDS 30.0%
! GAGTTGTTATGTTCTTCTTT+TGG - Chr5:101132570-101132589 None:intergenic 30.0%
! TAATCTGTGTCGGTATTAAA+AGG - Chr5:101134259-101134278 None:intergenic 30.0%
! TAGGTCTTCAAACTTGATTT+TGG + Chr5:101131951-101131970 MsG0580029719.01.T01:intron 30.0%
! TCTCAACATGTCAAAAGTAT+TGG + Chr5:101131404-101131423 MsG0580029719.01.T01:CDS 30.0%
! TCTTCAACAAAGTACTTTGT+TGG - Chr5:101129926-101129945 None:intergenic 30.0%
! TTATGTTCTTCTTTTGGATC+TGG - Chr5:101132564-101132583 None:intergenic 30.0%
!! CTCAACATGTCAAAAGTATT+GGG + Chr5:101131405-101131424 MsG0580029719.01.T01:CDS 30.0%
!! TAAATTGTTCGTTTTAGGCA+AGG + Chr5:101134397-101134416 MsG0580029719.01.T01:intron 30.0%
!! TATAGATTTGCTGCAAAACA+AGG + Chr5:101132871-101132890 MsG0580029719.01.T01:CDS 30.0%
!!! AGTTTTAACTAACTACCCTT+TGG + Chr5:101133031-101133050 MsG0580029719.01.T01:intron 30.0%
!!! CCTTTTGGTCTTACTTTAAT+TGG + Chr5:101133005-101133024 MsG0580029719.01.T01:CDS 30.0%
!!! TTACAGCATGTTTTGATTCA+CGG - Chr5:101134349-101134368 None:intergenic 30.0%
AAACTTATGAATGCCTCTAC+TGG + Chr5:101134116-101134135 MsG0580029719.01.T01:CDS 35.0%
AACAATGGGGACTTTATGAT+GGG + Chr5:101131712-101131731 MsG0580029719.01.T01:CDS 35.0%
AACGTGTCTTAAGCAAGATA+AGG + Chr5:101133667-101133686 MsG0580029719.01.T01:CDS 35.0%
AACTTGTCATCACTAGTACA+AGG + Chr5:101131676-101131695 MsG0580029719.01.T01:CDS 35.0%
AAGATAAGGAAGCAAGATTC+TGG + Chr5:101133681-101133700 MsG0580029719.01.T01:CDS 35.0%
AAGCAACTTTCAAAATCTGG+AGG + Chr5:101134900-101134919 MsG0580029719.01.T01:CDS 35.0%
AAGGTGTAGAGTTCAAACTT+TGG - Chr5:101130228-101130247 None:intergenic 35.0%
AATGTCGTGATACAAGAAGA+TGG + Chr5:101132084-101132103 MsG0580029719.01.T01:intron 35.0%
ACACTTGTGAAACTCTTTGA+AGG - Chr5:101130801-101130820 None:intergenic 35.0%
ACCATCAATTGAAAGCCTAA+GGG - Chr5:101133604-101133623 None:intergenic 35.0%
AGGATCTCCATTACTTTCAT+AGG - Chr5:101133799-101133818 None:intergenic 35.0%
ATGAAAGGAGTTGTGTCTAA+GGG + Chr5:101134759-101134778 MsG0580029719.01.T01:CDS 35.0%
ATGCATACTTTATAGGTGGA+AGG + Chr5:101130344-101130363 MsG0580029719.01.T01:intron 35.0%
ATGCATTAGTGAAACAACAG+AGG + Chr5:101134857-101134876 MsG0580029719.01.T01:CDS 35.0%
CAAGAAATTGACGAACAATG+GGG + Chr5:101131699-101131718 MsG0580029719.01.T01:CDS 35.0%
CGAGTTACAATGTTCATACT+AGG + Chr5:101133207-101133226 MsG0580029719.01.T01:intron 35.0%
CGGTACATATAGATTATCGT+TGG + Chr5:101134063-101134082 MsG0580029719.01.T01:CDS 35.0%
CTACACAGAAAAAACTTCAG+AGG + Chr5:101130501-101130520 MsG0580029719.01.T01:CDS 35.0%
CTTGAACAACTTCTTAAGCA+AGG + Chr5:101131570-101131589 MsG0580029719.01.T01:CDS 35.0%
GACATAGAAGATATGTCTTC+TGG + Chr5:101132742-101132761 MsG0580029719.01.T01:intron 35.0%
GATTACGAGGAAATGATTTC+TGG + Chr5:101134717-101134736 MsG0580029719.01.T01:CDS 35.0%
GCAAACATGTATGTCATTCT+TGG + Chr5:101134678-101134697 MsG0580029719.01.T01:CDS 35.0%
GCAAGAAATTGACGAACAAT+GGG + Chr5:101131698-101131717 MsG0580029719.01.T01:CDS 35.0%
GTCATCTCTGTTCCATTATA+AGG - Chr5:101132725-101132744 None:intergenic 35.0%
TAGTGTCCATGAATCACATA+AGG - Chr5:101131462-101131481 None:intergenic 35.0%
TATCATCAGACCATATTTCC+TGG - Chr5:101130538-101130557 None:intergenic 35.0%
TATGTCATTCTTGGAGAAAC+CGG + Chr5:101134687-101134706 MsG0580029719.01.T01:CDS 35.0%
TCATCCTCATCATTATCATC+TGG - Chr5:101131258-101131277 None:intergenic 35.0%
TCTGCCTGATCAAGATTATT+CGG + Chr5:101134043-101134062 MsG0580029719.01.T01:CDS 35.0%
TGAAAGTTGCTTCAAAGCAT+TGG - Chr5:101134892-101134911 None:intergenic 35.0%
TGAATGTTACATGATCGACA+TGG - Chr5:101129673-101129692 None:intergenic 35.0%
TGATCTACACTCAAAACTTG+AGG - Chr5:101132304-101132323 None:intergenic 35.0%
TGCAAACTGTATAAAAGCCA+AGG - Chr5:101130957-101130976 None:intergenic 35.0%
TGCAGCAAATCTATATATCC+AGG - Chr5:101132866-101132885 None:intergenic 35.0%
TGTACCGAATAATCTTGATC+AGG - Chr5:101134050-101134069 None:intergenic 35.0%
TGTGACAATACCATCTCTAA+TGG + Chr5:101132024-101132043 MsG0580029719.01.T01:intron 35.0%
! AGAATATACACCTTTTCTCG+TGG + Chr5:101133439-101133458 MsG0580029719.01.T01:CDS 35.0%
! GATGCTATAGTTTGTAGTAG+TGG + Chr5:101133975-101133994 MsG0580029719.01.T01:CDS 35.0%
! TAAGTGCATGGTTGGTATTA+CGG + Chr5:101134277-101134296 MsG0580029719.01.T01:intron 35.0%
! TGGCTTTTATACAGTTTGCA+TGG + Chr5:101130957-101130976 MsG0580029719.01.T01:intron 35.0%
!! AAAGTATTGGGTGAACAAGT+TGG + Chr5:101131417-101131436 MsG0580029719.01.T01:CDS 35.0%
!! GCTATGATATAGCCTTATCA+AGG + Chr5:101132538-101132557 MsG0580029719.01.T01:intron 35.0%
AAAGGTTAGCATACAGACGA+TGG + Chr5:101130378-101130397 MsG0580029719.01.T01:CDS 40.0%
AAATAAGTTCGGCAGTGTTC+AGG - Chr5:101133465-101133484 None:intergenic 40.0%
AAGGTTAGCATACAGACGAT+GGG + Chr5:101130379-101130398 MsG0580029719.01.T01:CDS 40.0%
AATACCCTCTATTAAGGCGA+AGG + Chr5:101133745-101133764 MsG0580029719.01.T01:CDS 40.0%
AATGAGAAGGATAGAAGCAG+AGG + Chr5:101131632-101131651 MsG0580029719.01.T01:CDS 40.0%
AATGATGAGGATGATAGCAC+CGG + Chr5:101131264-101131283 MsG0580029719.01.T01:CDS 40.0%
AATGGTGGCCACTAAAATGT+CGG + Chr5:101133130-101133149 MsG0580029719.01.T01:CDS 40.0%
ACACAGATTAAGTGCATGGT+TGG + Chr5:101134269-101134288 MsG0580029719.01.T01:intron 40.0%
ACCAAAAGGTTCACTAAAGC+AGG - Chr5:101132994-101133013 None:intergenic 40.0%
ACCATGCACTTAATCTGTGT+CGG - Chr5:101134269-101134288 None:intergenic 40.0%
AGACGATGGGAAATAGAACA+AGG + Chr5:101130392-101130411 MsG0580029719.01.T01:CDS 40.0%
AGTCTGATCTTCATCGTACA+TGG + Chr5:101129966-101129985 MsG0580029719.01.T01:CDS 40.0%
ATAATCAATGCCACACTTGG+TGG + Chr5:101132651-101132670 MsG0580029719.01.T01:intron 40.0%
ATCTCGAGAAAGAACTTCTC+TGG + Chr5:101131340-101131359 MsG0580029719.01.T01:CDS 40.0%
ATCTCTAATGGAATTTCCGC+AGG + Chr5:101132036-101132055 MsG0580029719.01.T01:intron 40.0%
ATGACTTGAGGCAAAAGCTT+CGG + Chr5:101134427-101134446 MsG0580029719.01.T01:CDS 40.0%
ATGAGTGCAGAAACAATGGT+TGG + Chr5:101133415-101133434 MsG0580029719.01.T01:CDS 40.0%
ATGCTTCTAGCCAGGAAATA+TGG + Chr5:101130525-101130544 MsG0580029719.01.T01:CDS 40.0%
ATGTCATTCTTGGAGAAACC+GGG + Chr5:101134688-101134707 MsG0580029719.01.T01:CDS 40.0%
ATTGGTACGAGGAGAAAACA+TGG + Chr5:101130980-101130999 MsG0580029719.01.T01:CDS 40.0%
CACAAGCAAACCATTGTTGA+GGG - Chr5:101133328-101133347 None:intergenic 40.0%
CACCATCAATTGAAAGCCTA+AGG - Chr5:101133605-101133624 None:intergenic 40.0%
CATAGACAATCTGATGTACC+TGG + Chr5:101132845-101132864 MsG0580029719.01.T01:CDS 40.0%
CATGAAAGGAGTTGTGTCTA+AGG + Chr5:101134758-101134777 MsG0580029719.01.T01:CDS 40.0%
CATGTTGAGAATGTGAGCTA+AGG - Chr5:101131394-101131413 None:intergenic 40.0%
CCAAATTGAAGGTAACGCTT+TGG - Chr5:101132164-101132183 None:intergenic 40.0%
CCATAGCTCCAATCAATATC+AGG - Chr5:101131207-101131226 None:intergenic 40.0%
CTGTATAAAAGCCAAGGTCA+TGG - Chr5:101130951-101130970 None:intergenic 40.0%
CTTGAGGCTATATTATCGAC+CGG + Chr5:101129824-101129843 MsG0580029719.01.T01:CDS 40.0%
CTTGGTAGAGATTCTGATAC+TGG + Chr5:101131005-101131024 MsG0580029719.01.T01:CDS 40.0%
GAAAGGTTGTGATTAATGGC+TGG + Chr5:101129779-101129798 MsG0580029719.01.T01:exon 40.0%
GAACAATGGGGACTTTATGA+TGG + Chr5:101131711-101131730 MsG0580029719.01.T01:CDS 40.0%
GACTTCAAATCTTCCTCAAG+AGG - Chr5:101134170-101134189 None:intergenic 40.0%
GGAAATAGAACAAGGACGTA+GGG + Chr5:101130400-101130419 MsG0580029719.01.T01:CDS 40.0%
GGCAAGAAATTGACGAACAA+TGG + Chr5:101131697-101131716 MsG0580029719.01.T01:CDS 40.0%
GTGCATTTGCCAAATCAAGA+TGG + Chr5:101134299-101134318 MsG0580029719.01.T01:intron 40.0%
TAATGTTAGGCCCTCAACAA+TGG + Chr5:101133315-101133334 MsG0580029719.01.T01:intron 40.0%
TCACTAATGCATGCAACAAG+AGG - Chr5:101134849-101134868 None:intergenic 40.0%
TCCCTTAGGCTTTCAATTGA+TGG + Chr5:101133600-101133619 MsG0580029719.01.T01:CDS 40.0%
TCTACTGGTGAAGAGACTAA+TGG + Chr5:101134131-101134150 MsG0580029719.01.T01:CDS 40.0%
TCTTCATCGTACATGGCTTA+AGG + Chr5:101129973-101129992 MsG0580029719.01.T01:CDS 40.0%
TGATCATTAGCTCGTTGTAG+CGG + Chr5:101132344-101132363 MsG0580029719.01.T01:intron 40.0%
TGCGGAAATTCCATTAGAGA+TGG - Chr5:101132037-101132056 None:intergenic 40.0%
TGCTTAAGACACGTTTCACT+TGG - Chr5:101133662-101133681 None:intergenic 40.0%
TGGAAGGAGAAGAACTTCAA+AGG + Chr5:101130360-101130379 MsG0580029719.01.T01:CDS 40.0%
TGTTGCCACTCGTAATACAA+GGG + Chr5:101129997-101130016 MsG0580029719.01.T01:CDS 40.0%
TTACCCCGATTAATGTCAAC+CGG - Chr5:101133157-101133176 None:intergenic 40.0%
TTAGGTATTTGTTCGTCCGT+TGG + Chr5:101134643-101134662 MsG0580029719.01.T01:intron 40.0%
TTCTCGAGATATTTATCGCG+CGG - Chr5:101131330-101131349 None:intergenic 40.0%
TTGGCACAACATCATCTCTT+TGG - Chr5:101134818-101134837 None:intergenic 40.0%
TTGTCATCCTATGTACTGCA+GGG + Chr5:101134464-101134483 MsG0580029719.01.T01:CDS 40.0%
TTGTTGCCACTCGTAATACA+AGG + Chr5:101129996-101130015 MsG0580029719.01.T01:CDS 40.0%
! ACAAGATTGGCTAGTTCTCA+AGG - Chr5:101132616-101132635 None:intergenic 40.0%
! AGAACATGTGTTGGCGTATT+TGG + Chr5:101130038-101130057 MsG0580029719.01.T01:CDS 40.0%
! AGGCTATATCATAGCTTGTG+AGG - Chr5:101132533-101132552 None:intergenic 40.0%
! AGGTCCAGATGATAATGATG+AGG + Chr5:101131251-101131270 MsG0580029719.01.T01:CDS 40.0%
! ATTAGTCTCTTCACCAGTAG+AGG - Chr5:101134132-101134151 None:intergenic 40.0%
! CCAAAGCGTTACCTTCAATT+TGG + Chr5:101132161-101132180 MsG0580029719.01.T01:intron 40.0%
! CCTGATATTGATTGGAGCTA+TGG + Chr5:101131204-101131223 MsG0580029719.01.T01:CDS 40.0%
! GATTAATGGCTGGTAATGAG+TGG + Chr5:101129789-101129808 MsG0580029719.01.T01:exon 40.0%
! GCAATTGCTTGATGATCATG+AGG - Chr5:101133354-101133373 None:intergenic 40.0%
! GTAGTAGTAGTTTGCCATTG+TGG - Chr5:101133519-101133538 None:intergenic 40.0%
! GTCATATTTTCCACCAAGTG+TGG - Chr5:101132664-101132683 None:intergenic 40.0%
! TCCTGCTTTAGTGAACCTTT+TGG + Chr5:101132990-101133009 MsG0580029719.01.T01:CDS 40.0%
!! ACAACGGAATTTCTAGCATC+CGG + Chr5:101133930-101133949 MsG0580029719.01.T01:CDS 40.0%
!! ACTGCAGAAAGAAGAGTGTT+GGG - Chr5:101132913-101132932 None:intergenic 40.0%
!! GCTGGTAATGAGTGGATTAA+TGG + Chr5:101129797-101129816 MsG0580029719.01.T01:CDS 40.0%
!! TTGTTCGTTTTAGGCAAGGA+AGG + Chr5:101134401-101134420 MsG0580029719.01.T01:intron 40.0%
!!! TTTTGGATCTGGCCTTGATA+AGG - Chr5:101132553-101132572 None:intergenic 40.0%
AACAGCAACTAGTCCTCTTG+AGG + Chr5:101134154-101134173 MsG0580029719.01.T01:CDS 45.0%
AATGTGCCAATGGTTCTCAC+TGG + Chr5:101131525-101131544 MsG0580029719.01.T01:CDS 45.0%
ACAACGAGCTAATGATCAGG+AGG - Chr5:101132342-101132361 None:intergenic 45.0%
ACCGACACAGATTAAGTGCA+TGG + Chr5:101134265-101134284 MsG0580029719.01.T01:intron 45.0%
ACGTTCCCTTGTATTACGAG+TGG - Chr5:101130005-101130024 None:intergenic 45.0%
AGAAAAGGGAGATGGCATTG+GGG + Chr5:101130460-101130479 MsG0580029719.01.T01:CDS 45.0%
AGAGTTGTCGGAAGGAGAAA+AGG + Chr5:101130445-101130464 MsG0580029719.01.T01:CDS 45.0%
AGATCTCTCACAGCTTACTG+TGG + Chr5:101132121-101132140 MsG0580029719.01.T01:intron 45.0%
CAAGACTCGAGAACATGTGT+TGG + Chr5:101130029-101130048 MsG0580029719.01.T01:CDS 45.0%
CACAGTGAGCCATCTTGATT+TGG - Chr5:101134311-101134330 None:intergenic 45.0%
CCACAAGCAAACCATTGTTG+AGG - Chr5:101133329-101133348 None:intergenic 45.0%
CCACGCGTGTCAAATAAGTT+CGG - Chr5:101133476-101133495 None:intergenic 45.0%
CCCTCAAACTGCAAGAGTTT+CGG + Chr5:101133872-101133891 MsG0580029719.01.T01:CDS 45.0%
CCGAAACTCTTGCAGTTTGA+GGG - Chr5:101133875-101133894 None:intergenic 45.0%
CCTACAGAAATGCTATCTGC+AGG + Chr5:101131231-101131250 MsG0580029719.01.T01:CDS 45.0%
CCTCAAACTGCAAGAGTTTC+GGG + Chr5:101133873-101133892 MsG0580029719.01.T01:CDS 45.0%
CCTGCAGATAGCATTTCTGT+AGG - Chr5:101131234-101131253 None:intergenic 45.0%
CGGTCGATAATATAGCCTCA+AGG - Chr5:101129826-101129845 None:intergenic 45.0%
GAATGACCAGTGAGAACCAT+TGG - Chr5:101131534-101131553 None:intergenic 45.0%
GAGAAAAGGGAGATGGCATT+GGG + Chr5:101130459-101130478 MsG0580029719.01.T01:CDS 45.0%
GAGTTGTCGGAAGGAGAAAA+GGG + Chr5:101130446-101130465 MsG0580029719.01.T01:CDS 45.0%
GCAACAAGAGGACTCTCATT+TGG - Chr5:101134837-101134856 None:intergenic 45.0%
GCAATGTTTGACCATGACCT+TGG + Chr5:101130937-101130956 MsG0580029719.01.T01:intron 45.0%
GCTACAACGAGCTAATGATC+AGG - Chr5:101132345-101132364 None:intergenic 45.0%
GGATTTGTCCGAAGAGTTGT+CGG + Chr5:101130433-101130452 MsG0580029719.01.T01:CDS 45.0%
GGGAAATAGAACAAGGACGT+AGG + Chr5:101130399-101130418 MsG0580029719.01.T01:CDS 45.0%
GGGAGTGAAGTTTATTACCC+TGG + Chr5:101133996-101134015 MsG0580029719.01.T01:CDS 45.0%
GGTAGAGATTCTGATACTGG+TGG + Chr5:101131008-101131027 MsG0580029719.01.T01:CDS 45.0%
GGTATGCGACATGTCCATAT+AGG - Chr5:101132817-101132836 None:intergenic 45.0%
GGTTCAGAAGAACTGCTTAG+AGG + Chr5:101134780-101134799 MsG0580029719.01.T01:CDS 45.0%
GTTCTCACTGGTCATTCACT+TGG + Chr5:101131537-101131556 MsG0580029719.01.T01:CDS 45.0%
GTTGTCATCCTATGTACTGC+AGG + Chr5:101134463-101134482 MsG0580029719.01.T01:CDS 45.0%
TCGGACCGGTTGACATTAAT+CGG + Chr5:101133149-101133168 MsG0580029719.01.T01:CDS 45.0%
TCGTTACATGCCTAGAATGG+CGG + Chr5:101131797-101131816 MsG0580029719.01.T01:CDS 45.0%
TCTTGCTCGCAAGAAGAAGA+AGG + Chr5:101130063-101130082 MsG0580029719.01.T01:CDS 45.0%
TGAATCACATAAGGCCACAC+AGG - Chr5:101131453-101131472 None:intergenic 45.0%
TGCATTCTTACCGCCATTCT+AGG - Chr5:101131810-101131829 None:intergenic 45.0%
TGCTCGTGCACTTGCAAAAA+CGG + Chr5:101131137-101131156 MsG0580029719.01.T01:CDS 45.0%
TGGCATGAGTGCAGAAACAA+TGG + Chr5:101133411-101133430 MsG0580029719.01.T01:CDS 45.0%
TGGTCGTTACATGCCTAGAA+TGG + Chr5:101131794-101131813 MsG0580029719.01.T01:CDS 45.0%
TGTCATCCTATGTACTGCAG+GGG + Chr5:101134465-101134484 MsG0580029719.01.T01:CDS 45.0%
TGTCATTCTTGGAGAAACCG+GGG + Chr5:101134689-101134708 MsG0580029719.01.T01:CDS 45.0%
TTCTCCTTCCGACAACTCTT+CGG - Chr5:101130444-101130463 None:intergenic 45.0%
! AGATTCTGATACTGGTGGAC+AGG + Chr5:101131013-101131032 MsG0580029719.01.T01:CDS 45.0%
! AGGTGCTTTGAATGTGCCAA+TGG + Chr5:101131515-101131534 MsG0580029719.01.T01:CDS 45.0%
! AGTTGATATCCTCCCACGAT+TGG - Chr5:101131599-101131618 None:intergenic 45.0%
! GAAGATATGTCTTCTGGGAG+TGG + Chr5:101132748-101132767 MsG0580029719.01.T01:intron 45.0%
! GACTGCAGAAAGAAGAGTGT+TGG - Chr5:101132914-101132933 None:intergenic 45.0%
! GTAGAATGAGGCATCCACAA+TGG + Chr5:101133502-101133521 MsG0580029719.01.T01:CDS 45.0%
! GTATTGGGTGAACAAGTTGG+CGG + Chr5:101131420-101131439 MsG0580029719.01.T01:CDS 45.0%
! GTGGATTAATGGCTACCTTG+AGG + Chr5:101129808-101129827 MsG0580029719.01.T01:CDS 45.0%
! TCATCTCTTTGGTAGCTTCC+TGG - Chr5:101134807-101134826 None:intergenic 45.0%
! TCTTCTTGCATCTAGAGCTC+AGG + Chr5:101134512-101134531 MsG0580029719.01.T01:CDS 45.0%
! TGTTTCTGCACTCATGCCAT+AGG - Chr5:101133410-101133429 None:intergenic 45.0%
!! AGTTTGCATGGATTGGTACG+AGG + Chr5:101130969-101130988 MsG0580029719.01.T01:intron 45.0%
!! CAAGGAAGGTTGATGACTTG+AGG + Chr5:101134415-101134434 MsG0580029719.01.T01:CDS 45.0%
!! CCTCAACAATGGTTTGCTTG+TGG + Chr5:101133326-101133345 MsG0580029719.01.T01:CDS 45.0%
!! GACATTTTAGTGGCCACCAT+TGG - Chr5:101133131-101133150 None:intergenic 45.0%
!! GATTATCGTTGGGGTGTTGA+AGG + Chr5:101134074-101134093 MsG0580029719.01.T01:CDS 45.0%
!! GGTGAATTTGCTGCATCAAG+CGG + Chr5:101133621-101133640 MsG0580029719.01.T01:CDS 45.0%
!! GTGTGGCCTTATGTGATTCA+TGG + Chr5:101131453-101131472 MsG0580029719.01.T01:CDS 45.0%
!! TGAGCTCTAGATGCAAGAAG+AGG - Chr5:101134513-101134532 None:intergenic 45.0%
!!! TTTCATTTTTAAAATATATT+TGG - Chr5:101132399-101132418 None:intergenic 5.0%
AATTGACGCCACGCCTATCA+CGG - Chr5:101131770-101131789 None:intergenic 50.0%
AGAAGATGGCCCTGAATCGA+CGG + Chr5:101132098-101132117 MsG0580029719.01.T01:intron 50.0%
AGAAGCAGAGGAGCTTTCCT+TGG + Chr5:101131644-101131663 MsG0580029719.01.T01:CDS 50.0%
AGGCAAAAGCTTCGGATGAG+AGG + Chr5:101134435-101134454 MsG0580029719.01.T01:CDS 50.0%
AGTGTTCAGGCCACGAGAAA+AGG - Chr5:101133452-101133471 None:intergenic 50.0%
ATACCAGGAGGGATAACCTG+CGG - Chr5:101132055-101132074 None:intergenic 50.0%
ATATTTATCGCGCGGACCGA+AGG - Chr5:101131322-101131341 None:intergenic 50.0%
ATTGCTGAGTCCATACCAGG+AGG - Chr5:101132067-101132086 None:intergenic 50.0%
CACCCTTTGCTGCTCTTCAA+CGG - Chr5:101129867-101129886 None:intergenic 50.0%
CACCGTTGAAGAGCAGCAAA+GGG + Chr5:101129862-101129881 MsG0580029719.01.T01:CDS 50.0%
CATGGACACTATGCTGATGC+TGG + Chr5:101131471-101131490 MsG0580029719.01.T01:CDS 50.0%
CCCGAAACTCTTGCAGTTTG+AGG - Chr5:101133876-101133895 None:intergenic 50.0%
CCGAACTTATTTGACACGCG+TGG + Chr5:101133473-101133492 MsG0580029719.01.T01:CDS 50.0%
CCTGGTGTTCACACAGAAGA+CGG + Chr5:101134014-101134033 MsG0580029719.01.T01:CDS 50.0%
CGAGGAGAAAACATGGAGCT+TGG + Chr5:101130987-101131006 MsG0580029719.01.T01:CDS 50.0%
CGGACCGGTTGACATTAATC+GGG + Chr5:101133150-101133169 MsG0580029719.01.T01:CDS 50.0%
CGTCTTCTGTGTGAACACCA+GGG - Chr5:101134016-101134035 None:intergenic 50.0%
CTGGTGTTCACACAGAAGAC+GGG + Chr5:101134015-101134034 MsG0580029719.01.T01:CDS 50.0%
CTGTGTGTTAACACCCACTC+AGG + Chr5:101133089-101133108 MsG0580029719.01.T01:intron 50.0%
GAAGAACTGCTTAGAGGTCC+AGG + Chr5:101134786-101134805 MsG0580029719.01.T01:CDS 50.0%
GACAAGTTCTGCAGCATCCA+AGG - Chr5:101131664-101131683 None:intergenic 50.0%
GACATTGCTGAGTCCATACC+AGG - Chr5:101132070-101132089 None:intergenic 50.0%
GAGGCTATATTATCGACCGG+TGG + Chr5:101129827-101129846 MsG0580029719.01.T01:CDS 50.0%
GCTATATTATCGACCGGTGG+TGG + Chr5:101129830-101129849 MsG0580029719.01.T01:CDS 50.0%
GGACCGGTTGACATTAATCG+GGG + Chr5:101133151-101133170 MsG0580029719.01.T01:CDS 50.0%
GGAGAAAAGGGAGATGGCAT+TGG + Chr5:101130458-101130477 MsG0580029719.01.T01:CDS 50.0%
GTCATCCTATGTACTGCAGG+GGG + Chr5:101134466-101134485 MsG0580029719.01.T01:CDS 50.0%
GTGCACTTGCAAAAACGGCA+GGG + Chr5:101131142-101131161 MsG0580029719.01.T01:CDS 50.0%
TATTTATCGCGCGGACCGAA+GGG - Chr5:101131321-101131340 None:intergenic 50.0%
TCGGAAGGAGAAAAGGGAGA+TGG + Chr5:101130452-101130471 MsG0580029719.01.T01:CDS 50.0%
TCTCTCACAGCTTACTGTGG+CGG + Chr5:101132124-101132143 MsG0580029719.01.T01:intron 50.0%
TGCACTTGCAAAAACGGCAG+GGG + Chr5:101131143-101131162 MsG0580029719.01.T01:CDS 50.0%
TGCGCCTTCGCCTTAATAGA+GGG - Chr5:101133752-101133771 None:intergenic 50.0%
TGGCCACTAAAATGTCGGAC+CGG + Chr5:101133135-101133154 MsG0580029719.01.T01:CDS 50.0%
TTCCTCGTAATCAGTGTCCC+CGG - Chr5:101134709-101134728 None:intergenic 50.0%
TTGCTGAGTCCATACCAGGA+GGG - Chr5:101132066-101132085 None:intergenic 50.0%
TTGTCCGAAGAGTTGTCGGA+AGG + Chr5:101130437-101130456 MsG0580029719.01.T01:CDS 50.0%
! AAGTTTTGCGTGCCCGTGAT+AGG + Chr5:101131754-101131773 MsG0580029719.01.T01:CDS 50.0%
! CAACCGGTCCGACATTTTAG+TGG - Chr5:101133141-101133160 None:intergenic 50.0%
! GACAGTGCTGCTCTTCTTTC+AGG + Chr5:101131495-101131514 MsG0580029719.01.T01:CDS 50.0%
!! GAATTTGCTGCATCAAGCGG+TGG + Chr5:101133624-101133643 MsG0580029719.01.T01:CDS 50.0%
!! GAGAGATCTCCGTCGATTCA+GGG - Chr5:101132110-101132129 None:intergenic 50.0%
!! TGAGAGATCTCCGTCGATTC+AGG - Chr5:101132111-101132130 None:intergenic 50.0%
AGGACGTAGGGATGCAACAG+AGG + Chr5:101130412-101130431 MsG0580029719.01.T01:CDS 55.0%
AGGCGTGGCGTCAATTGTCA+TGG + Chr5:101131774-101131793 MsG0580029719.01.T01:CDS 55.0%
ATATGCACCCCTGCTCTCTC+CGG - Chr5:101131286-101131305 None:intergenic 55.0%
ATTGACGCCACGCCTATCAC+GGG - Chr5:101131769-101131788 None:intergenic 55.0%
CCACCGTTGAAGAGCAGCAA+AGG + Chr5:101129861-101129880 MsG0580029719.01.T01:CDS 55.0%
CCGTCTTCTGTGTGAACACC+AGG - Chr5:101134017-101134036 None:intergenic 55.0%
CCTTTGCTGCTCTTCAACGG+TGG - Chr5:101129864-101129883 None:intergenic 55.0%
CGTGCACTTGCAAAAACGGC+AGG + Chr5:101131141-101131160 MsG0580029719.01.T01:CDS 55.0%
CGTTGAAGAGCAGCAAAGGG+TGG + Chr5:101129865-101129884 MsG0580029719.01.T01:CDS 55.0%
CTGCGCCTTCGCCTTAATAG+AGG - Chr5:101133753-101133772 None:intergenic 55.0%
GAAGACCCCCTGCAGTACAT+AGG - Chr5:101134474-101134493 None:intergenic 55.0%
GCAGGTTATCCCTCCTGGTA+TGG + Chr5:101132054-101132073 MsG0580029719.01.T01:intron 55.0%
GCGTGGATGCGTGTAGAATG+AGG + Chr5:101133490-101133509 MsG0580029719.01.T01:CDS 55.0%
TCCATTGCAGCTGCCTGAGT+GGG - Chr5:101133105-101133124 None:intergenic 55.0%
TGAAGAGCAGCAAAGGGTGG+CGG + Chr5:101129868-101129887 MsG0580029719.01.T01:CDS 55.0%
TTTCCGCAGGTTATCCCTCC+TGG + Chr5:101132049-101132068 MsG0580029719.01.T01:intron 55.0%
! AACCGGGGACACTGATTACG+AGG + Chr5:101134704-101134723 MsG0580029719.01.T01:CDS 55.0%
! ATGATAGCACCGGAGAGAGC+AGG + Chr5:101131274-101131293 MsG0580029719.01.T01:CDS 55.0%
! CATCTAGAGCTCAGGCACTC+AGG + Chr5:101134520-101134539 MsG0580029719.01.T01:CDS 55.0%
! CTCTATTAAGGCGAAGGCGC+AGG + Chr5:101133751-101133770 MsG0580029719.01.T01:CDS 55.0%
! TCAGAGGCATGCTTCTAGCC+AGG + Chr5:101130517-101130536 MsG0580029719.01.T01:CDS 55.0%
! TGATAGCACCGGAGAGAGCA+GGG + Chr5:101131275-101131294 MsG0580029719.01.T01:CDS 55.0%
! TTGGGTGAACAAGTTGGCGG+TGG + Chr5:101131423-101131442 MsG0580029719.01.T01:CDS 55.0%
!! CAGCTGCAATGGACTGCCAA+TGG + Chr5:101133112-101133131 MsG0580029719.01.T01:intron 55.0%
!! CAGCTTACTGTGGCGGATGA+TGG + Chr5:101132131-101132150 MsG0580029719.01.T01:intron 55.0%
!! CTGCAATGGACTGCCAATGG+TGG + Chr5:101133115-101133134 MsG0580029719.01.T01:CDS 55.0%
!! TAAGCAAGGGCGCCAATCGT+GGG + Chr5:101131584-101131603 MsG0580029719.01.T01:CDS 55.0%
!! TTAAGCAAGGGCGCCAATCG+TGG + Chr5:101131583-101131602 MsG0580029719.01.T01:CDS 55.0%
ACCCACTCAGGCAGCTGCAA+TGG + Chr5:101133101-101133120 MsG0580029719.01.T01:intron 60.0%
GTCCATTGCAGCTGCCTGAG+TGG - Chr5:101133106-101133125 None:intergenic 60.0%
TTGGCGGTGGACAACCTGTG+TGG + Chr5:101131436-101131455 MsG0580029719.01.T01:CDS 60.0%
! GATAGCACCGGAGAGAGCAG+GGG + Chr5:101131276-101131295 MsG0580029719.01.T01:CDS 60.0%
! GGTGGTTGAAGCACCACCAC+CGG - Chr5:101129846-101129865 None:intergenic 60.0%
GCGGCTGCAGCGAGAGAAAG+TGG + Chr5:101129887-101129906 MsG0580029719.01.T01:CDS 65.0%
TTGCGTGCCCGTGATAGGCG+TGG + Chr5:101131759-101131778 MsG0580029719.01.T01:CDS 65.0%
!! GCAAGGGCGCCAATCGTGGG+AGG + Chr5:101131587-101131606 MsG0580029719.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr5 gene 101129600 101135054 101129600 ID=MsG0580029719.01;Name=MsG0580029719.01
Chr5 mRNA 101129600 101135054 101129600 ID=MsG0580029719.01.T01;Parent=MsG0580029719.01;Name=MsG0580029719.01.T01;_AED=0.23;_eAED=0.23;_QI=194|0.7|0.72|1|1|1|11|125|950
Chr5 exon 101129600 101130084 101129600 ID=MsG0580029719.01.T01:exon:36716;Parent=MsG0580029719.01.T01
Chr5 exon 101130359 101130591 101130359 ID=MsG0580029719.01.T01:exon:36717;Parent=MsG0580029719.01.T01
Chr5 exon 101130971 101131034 101130971 ID=MsG0580029719.01.T01:exon:36718;Parent=MsG0580029719.01.T01
Chr5 exon 101131117 101131818 101131117 ID=MsG0580029719.01.T01:exon:36719;Parent=MsG0580029719.01.T01
Chr5 exon 101132058 101132070 101132058 ID=MsG0580029719.01.T01:exon:36720;Parent=MsG0580029719.01.T01
Chr5 exon 101132774 101132892 101132774 ID=MsG0580029719.01.T01:exon:36721;Parent=MsG0580029719.01.T01
Chr5 exon 101132978 101133027 101132978 ID=MsG0580029719.01.T01:exon:36722;Parent=MsG0580029719.01.T01
Chr5 exon 101133115 101133172 101133115 ID=MsG0580029719.01.T01:exon:36723;Parent=MsG0580029719.01.T01
Chr5 exon 101133324 101134235 101133324 ID=MsG0580029719.01.T01:exon:36724;Parent=MsG0580029719.01.T01
Chr5 exon 101134414 101134541 101134414 ID=MsG0580029719.01.T01:exon:36725;Parent=MsG0580029719.01.T01
Chr5 exon 101134647 101135054 101134647 ID=MsG0580029719.01.T01:exon:36726;Parent=MsG0580029719.01.T01
Chr5 five_prime_UTR 101129600 101129793 101129600 ID=MsG0580029719.01.T01:five_prime_utr;Parent=MsG0580029719.01.T01
Chr5 CDS 101129794 101130084 101129794 ID=MsG0580029719.01.T01:cds;Parent=MsG0580029719.01.T01
Chr5 CDS 101130359 101130591 101130359 ID=MsG0580029719.01.T01:cds;Parent=MsG0580029719.01.T01
Chr5 CDS 101130971 101131034 101130971 ID=MsG0580029719.01.T01:cds;Parent=MsG0580029719.01.T01
Chr5 CDS 101131117 101131818 101131117 ID=MsG0580029719.01.T01:cds;Parent=MsG0580029719.01.T01
Chr5 CDS 101132058 101132070 101132058 ID=MsG0580029719.01.T01:cds;Parent=MsG0580029719.01.T01
Chr5 CDS 101132774 101132892 101132774 ID=MsG0580029719.01.T01:cds;Parent=MsG0580029719.01.T01
Chr5 CDS 101132978 101133027 101132978 ID=MsG0580029719.01.T01:cds;Parent=MsG0580029719.01.T01
Chr5 CDS 101133115 101133172 101133115 ID=MsG0580029719.01.T01:cds;Parent=MsG0580029719.01.T01
Chr5 CDS 101133324 101134235 101133324 ID=MsG0580029719.01.T01:cds;Parent=MsG0580029719.01.T01
Chr5 CDS 101134414 101134541 101134414 ID=MsG0580029719.01.T01:cds;Parent=MsG0580029719.01.T01
Chr5 CDS 101134647 101134929 101134647 ID=MsG0580029719.01.T01:cds;Parent=MsG0580029719.01.T01
Chr5 three_prime_UTR 101134930 101135054 101134930 ID=MsG0580029719.01.T01:three_prime_utr;Parent=MsG0580029719.01.T01
Gene Sequence

>MsG0580029719.01.T01

ATGGCTGGTAATGAGTGGATTAATGGCTACCTTGAGGCTATATTATCGACCGGTGGTGGTGCTTCAACCACCGTTGAAGAGCAGCAAAGGGTGGCGGCTGCAGCGAGAGAAAGTGGTGATCATTTCAATCCAACAAAGTACTTTGTTGAAGAAGTAGTGAGTGCTGTTGATGAGTCTGATCTTCATCGTACATGGCTTAAGGTTGTTGCCACTCGTAATACAAGGGAACGTAGCTCAAGACTCGAGAACATGTGTTGGCGTATTTGGCATCTTGCTCGCAAGAAGAAGAAGGTGGAAGGAGAAGAACTTCAAAGGTTAGCATACAGACGATGGGAAATAGAACAAGGACGTAGGGATGCAACAGAGGATTTGTCCGAAGAGTTGTCGGAAGGAGAAAAGGGAGATGGCATTGGGGAGATAATACAAATTGAGACTACACAGAAAAAACTTCAGAGGCATGCTTCTAGCCAGGAAATATGGTCTGATGATAAAAAGGAAAAGAAACTTTATATTATCCTCTTAAGTTTGCATGGATTGGTACGAGGAGAAAACATGGAGCTTGGTAGAGATTCTGATACTGGTGGACAGATTAAATATGTGGTAGAACTTGCTCGTGCACTTGCAAAAACGGCAGGGGTATATAGAGTAGATCTCTTCACGCGCCAAATATCATCTCCTGATATTGATTGGAGCTATGGAGAACCTACAGAAATGCTATCTGCAGGTCCAGATGATAATGATGAGGATGATAGCACCGGAGAGAGCAGGGGTGCATATATCATAAGAATACCCTTCGGTCCGCGCGATAAATATCTCGAGAAAGAACTTCTCTGGCCTCACATTCAAGAATTTGTAGATGGAGCCTTAGCTCACATTCTCAACATGTCAAAAGTATTGGGTGAACAAGTTGGCGGTGGACAACCTGTGTGGCCTTATGTGATTCATGGACACTATGCTGATGCTGGTGACAGTGCTGCTCTTCTTTCAGGTGCTTTGAATGTGCCAATGGTTCTCACTGGTCATTCACTTGGAAGAAACAAACTTGAACAACTTCTTAAGCAAGGGCGCCAATCGTGGGAGGATATCAACTCAACGTATAAGATAATGAGAAGGATAGAAGCAGAGGAGCTTTCCTTGGATGCTGCAGAACTTGTCATCACTAGTACAAGGCAAGAAATTGACGAACAATGGGGACTTTATGATGGGTTTGATGTCAAGCTTGAGAAAGTTTTGCGTGCCCGTGATAGGCGTGGCGTCAATTGTCATGGTCGTTACATGCCTAGAATGGCGGTTATCCCTCCTGTGTGTTCTCACAACTGTGTTGAAACGATTGACAAATATGACCTATATGGACATGTCGCATACCCTAAACATCATAGACAATCTGATGTACCTGGATATATAGATTTGCTGCAAAACAAGAGTTTTCATAAATCCTGCTTTAGTGAACCTTTTGGTCTTACTTTAATTGGCTGCAATGGACTGCCAATGGTGGCCACTAAAATGTCGGACCGGTTGACATTAATCGGGGCCCTCAACAATGGTTTGCTTGTGGATCCTCATGATCATCAAGCAATTGCTGATGCATTACTCAAGTTGTTATCAGAGAAAAACCTATGGCATGAGTGCAGAAACAATGGTTGGAAGAATATACACCTTTTCTCGTGGCCTGAACACTGCCGAACTTATTTGACACGCGTGGATGCGTGTAGAATGAGGCATCCACAATGGCAAACTACTACTACTGAAGATGATGTAGATGTTGAAGAGTCTTTCAATGATTCACTTAAGGATGTTCAAGACATGTCCCTTAGGCTTTCAATTGATGGTGAATTTGCTGCATCAAGCGGTGGCAGTAACGAAGACCAAGTGAAACGTGTCTTAAGCAAGATAAGGAAGCAAGATTCTGGTTCAAATCATGAGAACATGTTGCTTGATAATGTATCAAACAAATACCCTCTATTAAGGCGAAGGCGCAGGTTGATTGTTATAGCACTTGATTCCTATGAAAGTAATGGAGATCCTGATAAGAAGTTGATTGAGATAGTTCAAAGGATAATTAAAGCTGTTCAATTAGACCCTCAAACTGCAAGAGTTTCGGGATTCGCTTTGCTGACTGCTATGACAATGCAAGAAACAACGGAATTTCTAGCATCCGGAAATGTTCAAGTGAATGAATTTGATGCTATAGTTTGTAGTAGTGGGAGTGAAGTTTATTACCCTGGTGTTCACACAGAAGACGGGAAGCTTCTGCCTGATCAAGATTATTCGGTACATATAGATTATCGTTGGGGTGTTGAAGGTCTAAAGAATACAATTTGTAAACTTATGAATGCCTCTACTGGTGAAGAGACTAATGGAACAGCAACTAGTCCTCTTGAGGAAGATTTGAAGTCTAGTAACGCACATTGCATTTCATACAAAATAAATGATCCTAGCAAGGCAAGGAAGGTTGATGACTTGAGGCAAAAGCTTCGGATGAGAGGTCTACGTTGTCATCCTATGTACTGCAGGGGGTCTTCTAGAATGCATGTTATTCCTCTTCTTGCATCTAGAGCTCAGGCACTCAGGTATTTGTTCGTCCGTTGGAGATTAAATGTTGCAAACATGTATGTCATTCTTGGAGAAACCGGGGACACTGATTACGAGGAAATGATTTCTGGAACACACAAGACTATAATCATGAAAGGAGTTGTGTCTAAGGGTTCAGAAGAACTGCTTAGAGGTCCAGGAAGCTACCAAAGAGATGATGTTGTGCCAAATGAGAGTCCTCTTGTTGCATGCATTAGTGAAACAACAGAGGAAAATATTGCCAATGCTTTGAAGCAACTTTCAAAATCTGGAGGAATATGA

Protein sequence

>MsG0580029719.01.T01

MAGNEWINGYLEAILSTGGGASTTVEEQQRVAAAARESGDHFNPTKYFVEEVVSAVDESDLHRTWLKVVATRNTRERSSRLENMCWRIWHLARKKKKVEGEELQRLAYRRWEIEQGRRDATEDLSEELSEGEKGDGIGEIIQIETTQKKLQRHASSQEIWSDDKKEKKLYIILLSLHGLVRGENMELGRDSDTGGQIKYVVELARALAKTAGVYRVDLFTRQISSPDIDWSYGEPTEMLSAGPDDNDEDDSTGESRGAYIIRIPFGPRDKYLEKELLWPHIQEFVDGALAHILNMSKVLGEQVGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQSWEDINSTYKIMRRIEAEELSLDAAELVITSTRQEIDEQWGLYDGFDVKLEKVLRARDRRGVNCHGRYMPRMAVIPPVCSHNCVETIDKYDLYGHVAYPKHHRQSDVPGYIDLLQNKSFHKSCFSEPFGLTLIGCNGLPMVATKMSDRLTLIGALNNGLLVDPHDHQAIADALLKLLSEKNLWHECRNNGWKNIHLFSWPEHCRTYLTRVDACRMRHPQWQTTTTEDDVDVEESFNDSLKDVQDMSLRLSIDGEFAASSGGSNEDQVKRVLSKIRKQDSGSNHENMLLDNVSNKYPLLRRRRRLIVIALDSYESNGDPDKKLIEIVQRIIKAVQLDPQTARVSGFALLTAMTMQETTEFLASGNVQVNEFDAIVCSSGSEVYYPGVHTEDGKLLPDQDYSVHIDYRWGVEGLKNTICKLMNASTGEETNGTATSPLEEDLKSSNAHCISYKINDPSKARKVDDLRQKLRMRGLRCHPMYCRGSSRMHVIPLLASRAQALRYLFVRWRLNVANMYVILGETGDTDYEEMISGTHKTIIMKGVVSKGSEELLRGPGSYQRDDVVPNESPLVACISETTEENIANALKQLSKSGGI*