Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023272.01.T01 | XP_013446789.2 | 100 | 178 | 0 | 0 | 1 | 178 | 9 | 186 | 3.58E-123 | 363 |
| MsG0480023272.01.T01 | XP_013446789.2 | 92.453 | 53 | 4 | 0 | 174 | 226 | 293 | 345 | 7.78E-20 | 97.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023272.01.T01 | Q9FYE5 | 78.667 | 150 | 32 | 0 | 29 | 178 | 1 | 150 | 3.00E-79 | 243 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023272.01.T01 | A0A1S2YFL2 | 88.571 | 175 | 17 | 1 | 4 | 178 | 12 | 183 | 8.30e-107 | 320 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047814.01 | MsG0480023272.01 | 0.837810 | 4.171486e-57 | 5.481476e-54 |
| MsG0080048058.01 | MsG0480023272.01 | 0.815754 | 7.861271e-52 | 5.467485e-49 |
| MsG0080048383.01 | MsG0480023272.01 | 0.843882 | 1.065805e-58 | 1.691102e-55 |
| MsG0080048461.01 | MsG0480023272.01 | 0.824142 | 9.473071e-54 | 8.320494e-51 |
| MsG0080048462.01 | MsG0480023272.01 | 0.819336 | 1.225260e-52 | 9.400971e-50 |
| MsG0080048787.01 | MsG0480023272.01 | 0.804105 | 2.534360e-49 | 1.295592e-46 |
| MsG0080048856.01 | MsG0480023272.01 | 0.835511 | 1.608296e-56 | 1.970970e-53 |
| MsG0180000001.01 | MsG0480023272.01 | 0.857567 | 1.494641e-62 | 3.705048e-59 |
| MsG0180000144.01 | MsG0480023272.01 | 0.815695 | 8.103667e-52 | 5.626659e-49 |
| MsG0180000195.01 | MsG0480023272.01 | 0.816917 | 4.319466e-52 | 3.101055e-49 |
| MsG0180000332.01 | MsG0480023272.01 | 0.812849 | 3.447553e-51 | 2.215713e-48 |
| MsG0180000334.01 | MsG0480023272.01 | 0.802523 | 5.387106e-49 | 2.644513e-46 |
| MsG0180000806.01 | MsG0480023272.01 | 0.809445 | 1.885209e-50 | 1.107075e-47 |
| MsG0180000824.01 | MsG0480023272.01 | 0.839496 | 1.530332e-57 | 2.117181e-54 |
| MsG0180000835.01 | MsG0480023272.01 | 0.811017 | 8.638144e-51 | 5.288573e-48 |
| MsG0180000836.01 | MsG0480023272.01 | 0.822011 | 2.975587e-53 | 2.460309e-50 |
| MsG0180001173.01 | MsG0480023272.01 | 0.849726 | 2.688197e-60 | 5.143902e-57 |
| MsG0180001237.01 | MsG0480023272.01 | 0.831314 | 1.790634e-55 | 1.935976e-52 |
| MsG0180001260.01 | MsG0480023272.01 | 0.829106 | 6.195969e-55 | 6.279746e-52 |
| MsG0180001662.01 | MsG0480023272.01 | 0.820735 | 5.863326e-53 | 4.677535e-50 |
| MsG0180002895.01 | MsG0480023272.01 | 0.802847 | 4.618444e-49 | 2.286180e-46 |
| MsG0180003455.01 | MsG0480023272.01 | 0.801010 | 1.101690e-48 | 5.205131e-46 |
| MsG0180003572.01 | MsG0480023272.01 | 0.824933 | 6.170188e-54 | 5.544045e-51 |
| MsG0180003922.01 | MsG0480023272.01 | 0.821368 | 4.189902e-53 | 3.402074e-50 |
| MsG0180003932.01 | MsG0480023272.01 | 0.842603 | 2.337910e-58 | 3.563150e-55 |
| MsG0180004486.01 | MsG0480023272.01 | 0.823441 | 1.383173e-53 | 1.191006e-50 |
| MsG0180004754.01 | MsG0480023272.01 | 0.804051 | 2.600772e-49 | 1.327725e-46 |
| MsG0180005049.01 | MsG0480023272.01 | 0.847213 | 1.333550e-59 | 2.353132e-56 |
| MsG0180005443.01 | MsG0480023272.01 | 0.826340 | 2.862670e-54 | 2.677242e-51 |
| MsG0180005445.01 | MsG0480023272.01 | 0.812235 | 4.694193e-51 | 2.968522e-48 |
| MsG0180005451.01 | MsG0480023272.01 | 0.811905 | 5.540370e-51 | 3.472065e-48 |
| MsG0180005493.01 | MsG0480023272.01 | 0.803967 | 2.707508e-49 | 1.379233e-46 |
| MsG0180005575.01 | MsG0480023272.01 | 0.837376 | 5.390633e-57 | 6.988368e-54 |
| MsG0180006017.01 | MsG0480023272.01 | 0.802988 | 4.319890e-49 | 2.145847e-46 |
| MsG0180006224.01 | MsG0480023272.01 | 0.823706 | 1.198661e-53 | 1.040130e-50 |
| MsG0280006376.01 | MsG0480023272.01 | 0.823470 | 1.361308e-53 | 1.173158e-50 |
| MsG0280010980.01 | MsG0480023272.01 | 0.809955 | 1.465038e-50 | 8.720323e-48 |
| MsG0280011014.01 | MsG0480023272.01 | 0.828716 | 7.702641e-55 | 7.717814e-52 |
| MsG0280011339.01 | MsG0480023272.01 | 0.816700 | 4.830598e-52 | 3.447455e-49 |
| MsG0280011388.01 | MsG0480023272.01 | 0.843717 | 1.179908e-58 | 1.862309e-55 |
| MsG0380012067.01 | MsG0480023272.01 | 0.813767 | 2.166077e-51 | 1.427176e-48 |
| MsG0380012371.01 | MsG0480023272.01 | 0.809210 | 2.117652e-50 | 1.235838e-47 |
| MsG0380012471.01 | MsG0480023272.01 | 0.811001 | 8.710127e-51 | 5.330412e-48 |
| MsG0380013183.01 | MsG0480023272.01 | 0.816110 | 6.547424e-52 | 4.597978e-49 |
| MsG0380013475.01 | MsG0480023272.01 | 0.821009 | 5.069021e-53 | 4.075563e-50 |
| MsG0380013549.01 | MsG0480023272.01 | 0.809637 | 1.715022e-50 | 1.012348e-47 |
| MsG0380013579.01 | MsG0480023272.01 | 0.804881 | 1.745559e-49 | 9.104672e-47 |
| MsG0380013834.01 | MsG0480023272.01 | 0.814438 | 1.540653e-51 | 1.033796e-48 |
| MsG0380014489.01 | MsG0480023272.01 | 0.801916 | 7.184829e-49 | 3.472982e-46 |
| MsG0380014537.01 | MsG0480023272.01 | 0.811654 | 6.285085e-51 | 3.912420e-48 |
| MsG0380014667.01 | MsG0480023272.01 | 0.803275 | 3.767157e-49 | 1.885173e-46 |
| MsG0380014706.01 | MsG0480023272.01 | 0.815705 | 8.062914e-52 | 5.599873e-49 |
| MsG0480018462.01 | MsG0480023272.01 | 0.804387 | 2.213864e-49 | 1.139960e-46 |
| MsG0480018641.01 | MsG0480023272.01 | 0.802481 | 5.496094e-49 | 2.695188e-46 |
| MsG0480018846.01 | MsG0480023272.01 | 0.801770 | 7.696413e-49 | 3.706405e-46 |
| MsG0480018894.01 | MsG0480023272.01 | 0.808874 | 2.498874e-50 | 1.445170e-47 |
| MsG0480019206.01 | MsG0480023272.01 | 0.843549 | 1.308634e-58 | 2.054680e-55 |
| MsG0480020331.01 | MsG0480023272.01 | 0.806947 | 6.423203e-50 | 3.532199e-47 |
| MsG0480020591.01 | MsG0480023272.01 | 0.800394 | 1.471132e-48 | 6.842417e-46 |
| MsG0480020675.01 | MsG0480023272.01 | 0.801271 | 9.739372e-49 | 4.631729e-46 |
| MsG0480020739.01 | MsG0480023272.01 | 0.803796 | 2.938605e-49 | 1.490356e-46 |
| MsG0480020780.01 | MsG0480023272.01 | 0.850136 | 2.063181e-60 | 4.001378e-57 |
| MsG0480020879.01 | MsG0480023272.01 | 0.818910 | 1.531881e-52 | 1.161814e-49 |
| MsG0480021195.01 | MsG0480023272.01 | 0.819865 | 9.281037e-53 | 7.227580e-50 |
| MsG0480021452.01 | MsG0480023272.01 | 0.800743 | 1.248670e-48 | 5.859284e-46 |
| MsG0480021534.01 | MsG0480023272.01 | 0.800347 | 1.503964e-48 | 6.986862e-46 |
| MsG0480021796.01 | MsG0480023272.01 | 0.800258 | 1.568337e-48 | 7.269258e-46 |
| MsG0480022094.01 | MsG0480023272.01 | 0.801884 | 7.294912e-49 | 3.523466e-46 |
| MsG0480022115.01 | MsG0480023272.01 | 0.813047 | 3.119174e-51 | 2.015355e-48 |
| MsG0480022228.01 | MsG0480023272.01 | 0.829246 | 5.730637e-55 | 5.832802e-52 |
| MsG0480022481.01 | MsG0480023272.01 | 0.800712 | 1.267426e-48 | 5.942330e-46 |
| MsG0480022514.01 | MsG0480023272.01 | 0.824135 | 9.512193e-54 | 8.352903e-51 |
| MsG0480022620.01 | MsG0480023272.01 | 0.818205 | 2.213590e-52 | 1.646312e-49 |
| MsG0480022717.01 | MsG0480023272.01 | 0.803721 | 3.045908e-49 | 1.541760e-46 |
| MsG0480022825.01 | MsG0480023272.01 | 0.817274 | 3.590214e-52 | 2.602734e-49 |
| MsG0480022855.01 | MsG0480023272.01 | 0.801406 | 9.142251e-49 | 4.362418e-46 |
| MsG0480023172.01 | MsG0480023272.01 | 0.827802 | 1.279203e-54 | 1.247999e-51 |
| MsG0480023221.01 | MsG0480023272.01 | 0.813210 | 2.872997e-51 | 1.864463e-48 |
| MsG0480023272.01 | MsG0480023307.01 | 0.939995 | 4.965952e-100 | 5.284895e-95 |
| MsG0480023272.01 | MsG0480023463.01 | 0.814586 | 1.428778e-51 | 9.625414e-49 |
| MsG0480023272.01 | MsG0480023755.01 | 0.826494 | 2.631372e-54 | 2.471534e-51 |
| MsG0480023272.01 | MsG0480023873.01 | 0.822764 | 1.989103e-53 | 1.680518e-50 |
| MsG0480023272.01 | MsG0580024618.01 | 0.808838 | 2.543441e-50 | 1.469533e-47 |
| MsG0480023272.01 | MsG0580025466.01 | 0.810701 | 1.011259e-50 | 6.138792e-48 |
| MsG0480023272.01 | MsG0580025587.01 | 0.809702 | 1.660626e-50 | 9.818759e-48 |
| MsG0480023272.01 | MsG0580025661.01 | 0.826871 | 2.137997e-54 | 2.030064e-51 |
| MsG0480023272.01 | MsG0580025986.01 | 0.806214 | 9.168970e-50 | 4.948625e-47 |
| MsG0480023272.01 | MsG0580026075.01 | 0.805345 | 1.396452e-49 | 7.370177e-47 |
| MsG0480023272.01 | MsG0580026226.01 | 0.805968 | 1.032908e-49 | 5.539763e-47 |
| MsG0480023272.01 | MsG0580027091.01 | 0.832610 | 8.567943e-56 | 9.625797e-53 |
| MsG0480023272.01 | MsG0580027320.01 | 0.820100 | 8.196255e-53 | 6.425738e-50 |
| MsG0480023272.01 | MsG0580027431.01 | 0.802267 | 6.084886e-49 | 2.967722e-46 |
| MsG0480023272.01 | MsG0580027650.01 | 0.810529 | 1.101711e-50 | 6.656826e-48 |
| MsG0480023272.01 | MsG0580027925.01 | 0.817005 | 4.127499e-52 | 2.970537e-49 |
| MsG0480023272.01 | MsG0580028517.01 | 0.806859 | 6.702303e-50 | 3.677484e-47 |
| MsG0480023272.01 | MsG0580028897.01 | 0.808877 | 2.496136e-50 | 1.443673e-47 |
| MsG0480023272.01 | MsG0580029127.01 | 0.802286 | 6.030126e-49 | 2.942552e-46 |
| MsG0480023272.01 | MsG0580029236.01 | 0.814229 | 1.713888e-51 | 1.143475e-48 |
| MsG0480023272.01 | MsG0580029592.01 | 0.800724 | 1.260097e-48 | 5.909983e-46 |
| MsG0480023272.01 | MsG0580029729.01 | 0.830029 | 3.695545e-55 | 3.847695e-52 |
| MsG0480023272.01 | MsG0580029736.01 | 0.809103 | 2.232406e-50 | 1.299073e-47 |
| MsG0480023272.01 | MsG0580029926.01 | 0.825894 | 3.654244e-54 | 3.374517e-51 |
| MsG0480023272.01 | MsG0680030447.01 | 0.812388 | 4.346408e-51 | 2.759927e-48 |
| MsG0480023272.01 | MsG0680030881.01 | 0.811253 | 7.679097e-51 | 4.730277e-48 |
| MsG0480023272.01 | MsG0680031145.01 | 0.800913 | 1.153016e-48 | 5.434118e-46 |
| MsG0480023272.01 | MsG0680031506.01 | 0.803979 | 2.692046e-49 | 1.371816e-46 |
| MsG0480023272.01 | MsG0680031549.01 | 0.811798 | 5.845954e-51 | 3.653211e-48 |
| MsG0480023272.01 | MsG0680031699.01 | 0.807289 | 5.436972e-50 | 3.016639e-47 |
| MsG0480023272.01 | MsG0680033392.01 | 0.837791 | 4.219916e-57 | 5.542083e-54 |
| MsG0480023272.01 | MsG0680034739.01 | 0.843453 | 1.388218e-58 | 2.173094e-55 |
| MsG0480023272.01 | MsG0680035306.01 | 0.814265 | 1.682599e-51 | 1.123723e-48 |
| MsG0480023272.01 | MsG0680035346.01 | 0.802340 | 5.875748e-49 | 2.871185e-46 |
| MsG0480023272.01 | MsG0680035658.01 | 0.821054 | 4.951247e-53 | 3.985656e-50 |
| MsG0480023272.01 | MsG0680035888.01 | 0.837752 | 4.318477e-57 | 5.664761e-54 |
| MsG0480023272.01 | MsG0780035979.01 | 0.801598 | 8.350289e-49 | 4.003659e-46 |
| MsG0480023272.01 | MsG0780036136.01 | 0.807723 | 4.398003e-50 | 2.467882e-47 |
| MsG0480023272.01 | MsG0780036663.01 | 0.849713 | 2.710058e-60 | 5.183458e-57 |
| MsG0480023272.01 | MsG0780036719.01 | 0.822939 | 1.810907e-53 | 1.537499e-50 |
| MsG0480023272.01 | MsG0780036943.01 | 0.819792 | 9.642278e-53 | 7.494156e-50 |
| MsG0480023272.01 | MsG0780037054.01 | 0.820540 | 6.498174e-53 | 5.156304e-50 |
| MsG0480023272.01 | MsG0780037093.01 | 0.814702 | 1.346372e-51 | 9.098833e-49 |
| MsG0480023272.01 | MsG0780037240.01 | 0.842422 | 2.611015e-58 | 3.957363e-55 |
| MsG0480023272.01 | MsG0780038051.01 | 0.805723 | 1.163369e-49 | 6.200504e-47 |
| MsG0480023272.01 | MsG0780038188.01 | 0.802387 | 5.746138e-49 | 2.811296e-46 |
| MsG0480023272.01 | MsG0780038443.01 | 0.816572 | 5.161551e-52 | 3.670803e-49 |
| MsG0480023272.01 | MsG0780038603.01 | 0.833020 | 6.777550e-56 | 7.708645e-53 |
| MsG0480023272.01 | MsG0780038910.01 | -0.804734 | 1.873457e-49 | 9.734593e-47 |
| MsG0480023272.01 | MsG0780039170.01 | 0.823310 | 1.484179e-53 | 1.273250e-50 |
| MsG0480023272.01 | MsG0780039243.01 | 0.807328 | 5.334354e-50 | 2.962708e-47 |
| MsG0480023272.01 | MsG0780039369.01 | 0.818317 | 2.087310e-52 | 1.557227e-49 |
| MsG0480023272.01 | MsG0780039423.01 | 0.805785 | 1.128681e-49 | 6.024983e-47 |
| MsG0480023272.01 | MsG0780039443.01 | 0.847461 | 1.139359e-59 | 2.026756e-56 |
| MsG0480023272.01 | MsG0780039717.01 | 0.828118 | 1.073668e-54 | 1.057336e-51 |
| MsG0480023272.01 | MsG0780039845.01 | 0.817809 | 2.719991e-52 | 2.001165e-49 |
| MsG0480023272.01 | MsG0780040044.01 | 0.822712 | 2.045610e-53 | 1.725584e-50 |
| MsG0480023272.01 | MsG0780040529.01 | 0.817302 | 3.538502e-52 | 2.567278e-49 |
| MsG0480023272.01 | MsG0780040845.01 | 0.805990 | 1.022123e-49 | 5.484999e-47 |
| MsG0480023272.01 | MsG0780040888.01 | 0.802649 | 5.075906e-49 | 2.499754e-46 |
| MsG0480023272.01 | MsG0780040926.01 | 0.850691 | 1.441722e-60 | 2.847389e-57 |
| MsG0480023272.01 | MsG0780041016.01 | 0.813457 | 2.534690e-51 | 1.656243e-48 |
| MsG0480023272.01 | MsG0780041440.01 | 0.819469 | 1.142701e-52 | 8.801418e-50 |
| MsG0480023272.01 | MsG0780041482.01 | 0.820540 | 6.498952e-53 | 5.156873e-50 |
| MsG0480023272.01 | MsG0780041584.01 | 0.800130 | 1.665361e-48 | 7.693916e-46 |
| MsG0480023272.01 | MsG0880042128.01 | 0.821543 | 3.817871e-53 | 3.115229e-50 |
| MsG0480023272.01 | MsG0880042207.01 | 0.811321 | 7.420855e-51 | 4.579218e-48 |
| MsG0480023272.01 | MsG0880042518.01 | 0.809075 | 2.263328e-50 | 1.316072e-47 |
| MsG0480023272.01 | MsG0880042520.01 | 0.829448 | 5.118253e-55 | 5.239900e-52 |
| MsG0480023272.01 | MsG0880042698.01 | 0.803950 | 2.729882e-49 | 1.390074e-46 |
| MsG0480023272.01 | MsG0880042760.01 | 0.843070 | 1.756561e-58 | 2.716337e-55 |
| MsG0480023272.01 | MsG0880042829.01 | 0.839987 | 1.140532e-57 | 1.602196e-54 |
| MsG0480023272.01 | MsG0880043479.01 | 0.809845 | 1.546692e-50 | 9.179702e-48 |
| MsG0480023272.01 | MsG0880043480.01 | 0.828506 | 8.654954e-55 | 8.620116e-52 |
| MsG0480023272.01 | MsG0880043886.01 | 0.802469 | 5.529041e-49 | 2.710526e-46 |
| MsG0480023272.01 | MsG0880044782.01 | 0.826076 | 3.307902e-54 | 3.070289e-51 |
| MsG0480023272.01 | MsG0880045145.01 | 0.819956 | 8.843592e-53 | 6.904750e-50 |
| MsG0480023272.01 | MsG0880045393.01 | 0.804996 | 1.652097e-49 | 8.641773e-47 |
| MsG0480023272.01 | MsG0880045656.01 | 0.803433 | 3.494627e-49 | 1.755898e-46 |
| MsG0480023272.01 | MsG0880045838.01 | 0.817947 | 2.530937e-52 | 1.869009e-49 |
| MsG0480023272.01 | MsG0880045965.01 | 0.814058 | 1.868878e-51 | 1.241152e-48 |
| MsG0480023272.01 | MsG0880046012.01 | 0.808665 | 2.770637e-50 | 1.593514e-47 |
| MsG0480023272.01 | MsG0880046027.01 | 0.847661 | 1.004375e-59 | 1.798087e-56 |
| MsG0480023272.01 | MsG0880046069.01 | 0.817111 | 3.907268e-52 | 2.820015e-49 |
| MsG0480023272.01 | MsG0880046284.01 | 0.803255 | 3.803474e-49 | 1.902371e-46 |
| MsG0480023272.01 | MsG0880047470.01 | 0.829966 | 3.828415e-55 | 3.978929e-52 |
| MsG0480023272.01 | MsG0880047472.01 | 0.821894 | 3.167634e-53 | 2.610533e-50 |
| MsG0480023272.01 | MsG0880047473.01 | 0.838936 | 2.138769e-57 | 2.908383e-54 |
| MsG0480023272.01 | MsG0880047743.01 | 0.810704 | 1.009629e-50 | 6.129449e-48 |
| MsG0380015332.01 | MsG0480023272.01 | 0.819325 | 1.232574e-52 | 9.454506e-50 |
| MsG0380015435.01 | MsG0480023272.01 | 0.820525 | 6.551079e-53 | 5.195846e-50 |
| MsG0380015497.01 | MsG0480023272.01 | 0.801972 | 6.996307e-49 | 3.386491e-46 |
| MsG0380015555.01 | MsG0480023272.01 | 0.819796 | 9.620255e-53 | 7.477963e-50 |
| MsG0380015944.01 | MsG0480023272.01 | 0.831285 | 1.820397e-55 | 1.966400e-52 |
| MsG0380016005.01 | MsG0480023272.01 | 0.801737 | 7.819696e-49 | 3.762540e-46 |
| MsG0380016247.01 | MsG0480023272.01 | 0.847875 | 8.765211e-60 | 1.579804e-56 |
| MsG0380016387.01 | MsG0480023272.01 | 0.815910 | 7.258145e-52 | 5.068896e-49 |
| MsG0380016389.01 | MsG0480023272.01 | 0.806306 | 8.771731e-50 | 4.745019e-47 |
| MsG0380016407.01 | MsG0480023272.01 | 0.817978 | 2.490632e-52 | 1.840815e-49 |
| MsG0380016505.01 | MsG0480023272.01 | 0.831291 | 1.814417e-55 | 1.960264e-52 |
| MsG0380016765.01 | MsG0480023272.01 | 0.813341 | 2.688615e-51 | 1.751148e-48 |
| MsG0380016970.01 | MsG0480023272.01 | 0.824903 | 6.270322e-54 | 5.629390e-51 |
| MsG0480018235.01 | MsG0480023272.01 | 0.804428 | 2.170148e-49 | 1.118619e-46 |
| MsG0480018313.01 | MsG0480023272.01 | 0.809708 | 1.655972e-50 | 9.792851e-48 |
| MsG0280007226.01 | MsG0480023272.01 | 0.806644 | 7.443193e-50 | 4.061023e-47 |
| MsG0280007321.01 | MsG0480023272.01 | 0.821811 | 3.309753e-53 | 2.721317e-50 |
| MsG0280007452.01 | MsG0480023272.01 | 0.804029 | 2.627827e-49 | 1.340774e-46 |
| MsG0280007491.01 | MsG0480023272.01 | 0.845994 | 2.869700e-59 | 4.869405e-56 |
| MsG0280007527.01 | MsG0480023272.01 | 0.814656 | 1.378450e-51 | 9.303842e-49 |
| MsG0280008100.01 | MsG0480023272.01 | 0.800708 | 1.269542e-48 | 5.951693e-46 |
| MsG0280008378.01 | MsG0480023272.01 | 0.811471 | 6.886740e-51 | 4.266740e-48 |
| MsG0280008457.01 | MsG0480023272.01 | 0.837133 | 6.222066e-57 | 8.006640e-54 |
| MsG0280008614.01 | MsG0480023272.01 | 0.835697 | 1.442976e-56 | 1.778430e-53 |
| MsG0280008885.01 | MsG0480023272.01 | 0.806691 | 7.274218e-50 | 3.973779e-47 |
| MsG0280008909.01 | MsG0480023272.01 | 0.843736 | 1.166253e-58 | 1.841899e-55 |
| MsG0280009575.01 | MsG0480023272.01 | 0.803908 | 2.785304e-49 | 1.416756e-46 |
| MsG0280009748.01 | MsG0480023272.01 | 0.834010 | 3.837390e-56 | 4.495767e-53 |
| MsG0280010002.01 | MsG0480023272.01 | 0.808189 | 3.499526e-50 | 1.987986e-47 |
| MsG0280010109.01 | MsG0480023272.01 | 0.824747 | 6.827651e-54 | 6.102366e-51 |
| MsG0280010148.01 | MsG0480023272.01 | 0.827232 | 1.752610e-54 | 1.681883e-51 |
| MsG0280010176.01 | MsG0480023272.01 | 0.813963 | 1.961057e-51 | 1.299018e-48 |
| MsG0280010489.01 | MsG0480023272.01 | 0.815153 | 1.069462e-51 | 7.315780e-49 |
| MsG0280010491.01 | MsG0480023272.01 | 0.804048 | 2.604828e-49 | 1.329680e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023272.01.T01 | MTR_8g090130 | 100.000 | 150 | 0 | 0 | 29 | 178 | 1 | 150 | 9.22e-105 | 305 |
| MsG0480023272.01.T01 | MTR_8g090130 | 92.453 | 53 | 4 | 0 | 174 | 226 | 257 | 309 | 5.09e-24 | 97.8 |
| MsG0480023272.01.T01 | MTR_5g081710 | 73.571 | 140 | 37 | 0 | 39 | 178 | 8 | 147 | 7.57e-73 | 224 |
| MsG0480023272.01.T01 | MTR_5g081710 | 64.706 | 51 | 18 | 0 | 174 | 224 | 254 | 304 | 2.79e-14 | 70.9 |
| MsG0480023272.01.T01 | MTR_3g070000 | 74.265 | 136 | 35 | 0 | 43 | 178 | 28 | 163 | 8.26e-70 | 216 |
| MsG0480023272.01.T01 | MTR_3g070000 | 64.706 | 51 | 18 | 0 | 174 | 224 | 270 | 320 | 3.41e-13 | 67.8 |
| MsG0480023272.01.T01 | MTR_3g462070 | 68.794 | 141 | 44 | 0 | 38 | 178 | 8 | 148 | 1.71e-69 | 215 |
| MsG0480023272.01.T01 | MTR_3g462070 | 70.588 | 51 | 15 | 0 | 174 | 224 | 255 | 305 | 3.36e-15 | 73.6 |
| MsG0480023272.01.T01 | MTR_4g018760 | 65.909 | 132 | 45 | 0 | 47 | 178 | 20 | 151 | 2.70e-60 | 192 |
| MsG0480023272.01.T01 | MTR_4g018760 | 71.154 | 52 | 15 | 0 | 174 | 225 | 258 | 309 | 1.51e-16 | 77.4 |
| MsG0480023272.01.T01 | MTR_4g101860 | 58.394 | 137 | 57 | 0 | 42 | 178 | 55 | 191 | 8.23e-51 | 169 |
| MsG0480023272.01.T01 | MTR_3g072380 | 34.351 | 131 | 86 | 0 | 47 | 177 | 22 | 152 | 1.28e-23 | 95.1 |
| MsG0480023272.01.T01 | MTR_1g030320 | 34.351 | 131 | 86 | 0 | 47 | 177 | 21 | 151 | 1.07e-22 | 94.7 |
| MsG0480023272.01.T01 | MTR_3g072380 | 34.351 | 131 | 86 | 0 | 47 | 177 | 22 | 152 | 1.52e-22 | 94.0 |
| MsG0480023272.01.T01 | MTR_0011s0320 | 36.054 | 147 | 82 | 7 | 44 | 184 | 18 | 158 | 1.08e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023272.01.T01 | AT5G04160 | 78.667 | 150 | 32 | 0 | 29 | 178 | 1 | 150 | 3.06e-80 | 243 |
| MsG0480023272.01.T01 | AT5G04160 | 77.358 | 53 | 12 | 0 | 174 | 226 | 257 | 309 | 4.08e-20 | 87.0 |
| MsG0480023272.01.T01 | AT3G10290 | 78.621 | 145 | 31 | 0 | 34 | 178 | 52 | 196 | 6.28e-79 | 241 |
| MsG0480023272.01.T01 | AT3G10290 | 77.358 | 53 | 12 | 0 | 174 | 226 | 303 | 355 | 1.15e-19 | 86.7 |
| MsG0480023272.01.T01 | AT3G11320 | 76.471 | 136 | 32 | 0 | 43 | 178 | 14 | 149 | 1.78e-71 | 220 |
| MsG0480023272.01.T01 | AT3G11320 | 66.667 | 51 | 17 | 0 | 174 | 224 | 256 | 306 | 8.05e-14 | 69.7 |
| MsG0480023272.01.T01 | AT5G05820 | 74.265 | 136 | 35 | 0 | 43 | 178 | 14 | 149 | 5.31e-69 | 214 |
| MsG0480023272.01.T01 | AT5G05820 | 66.667 | 51 | 17 | 0 | 174 | 224 | 256 | 306 | 8.85e-14 | 69.3 |
| MsG0480023272.01.T01 | AT1G12500 | 50.888 | 169 | 83 | 0 | 10 | 178 | 29 | 197 | 1.04e-51 | 171 |
| MsG0480023272.01.T01 | AT1G21870 | 35.115 | 131 | 85 | 0 | 47 | 177 | 22 | 152 | 3.99e-23 | 95.9 |
| MsG0480023272.01.T01 | AT1G77610 | 34.752 | 141 | 91 | 1 | 38 | 177 | 6 | 146 | 1.39e-22 | 94.4 |
| MsG0480023272.01.T01 | AT5G57100 | 36.641 | 131 | 72 | 5 | 52 | 177 | 76 | 200 | 6.62e-11 | 61.2 |
| MsG0480023272.01.T01 | AT5G57100 | 36.641 | 131 | 72 | 5 | 52 | 177 | 76 | 200 | 6.65e-11 | 61.6 |
| MsG0480023272.01.T01 | AT5G25400 | 32.381 | 210 | 104 | 11 | 19 | 201 | 2 | 200 | 7.72e-11 | 61.2 |
| MsG0480023272.01.T01 | AT5G57100 | 36.641 | 131 | 72 | 5 | 52 | 177 | 76 | 200 | 7.82e-11 | 60.8 |
| MsG0480023272.01.T01 | AT4G32390 | 32.857 | 210 | 103 | 11 | 19 | 201 | 2 | 200 | 9.72e-11 | 60.8 |
Find 57 sgRNAs with CRISPR-Local
Find 183 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGTACCTTATCTCAAATTA+TGG | 0.221981 | 4:-83011731 | MsG0480023272.01.T01:CDS |
| ATCAAGGTCACAGTTCTTAA+AGG | 0.247185 | 4:-83011603 | MsG0480023272.01.T01:CDS |
| CAATATCTCTCTCAAGTATT+TGG | 0.275503 | 4:-83011537 | MsG0480023272.01.T01:CDS |
| AATTATGTTAATCAGGTATT+AGG | 0.309168 | 4:-83009487 | MsG0480023272.01.T01:intron |
| CAATAAAAGTGACAGGGTTT+TGG | 0.309718 | 4:+83009419 | None:intergenic |
| GCTCTTGTTCCTGTTGTTGC+TGG | 0.312689 | 4:-83011413 | MsG0480023272.01.T01:CDS |
| GGCTACTCAGTTACTGTAAT+GGG | 0.394558 | 4:-83009388 | MsG0480023272.01.T01:CDS |
| AACATGAATTCTTTGTTGTT+TGG | 0.399155 | 4:+83011812 | None:intergenic |
| GGAGGAGGTGGAATCAAATC+AGG | 0.422337 | 4:-83011848 | MsG0480023272.01.T01:CDS |
| ACTTATTTATCATGATTTGA+TGG | 0.424401 | 4:-83009172 | MsG0480023272.01.T01:three_prime_UTR |
| AGGAAATTGAACTCATATAT+AGG | 0.433522 | 4:-83009129 | MsG0480023272.01.T01:three_prime_UTR |
| ATAGGATAGGAAGGCCTTGT+AGG | 0.443005 | 4:-83009111 | MsG0480023272.01.T01:three_prime_UTR |
| TTGCATACGGAGAAACAAAA+AGG | 0.447859 | 4:-83009360 | MsG0480023272.01.T01:CDS |
| TGACACATTGTGAGGAAGAT+TGG | 0.449241 | 4:+83011698 | None:intergenic |
| TGAAACCATAATTTGAGATA+AGG | 0.466205 | 4:+83011726 | None:intergenic |
| AAATACACGAGCATAACTAT+TGG | 0.473522 | 4:+83009307 | None:intergenic |
| CTTATTTATCATGATTTGAT+GGG | 0.474394 | 4:-83009171 | MsG0480023272.01.T01:three_prime_UTR |
| ATCATGATTTGATGGGATGA+TGG | 0.489832 | 4:-83009164 | MsG0480023272.01.T01:three_prime_UTR |
| GCCATGCCAATAAAAGTGAC+AGG | 0.492901 | 4:+83009412 | None:intergenic |
| ATGGCAACACCAGCAACAAC+AGG | 0.493877 | 4:+83011404 | None:intergenic |
| TTGCAAATCCAGGGAGGAGG+TGG | 0.497230 | 4:-83011860 | MsG0480023272.01.T01:intron |
| TGGCTACTCAGTTACTGTAA+TGG | 0.499480 | 4:-83009389 | MsG0480023272.01.T01:CDS |
| TTGTACCGTGACTAGGAGTA+GGG | 0.500637 | 4:-83009253 | MsG0480023272.01.T01:three_prime_UTR |
| TTTGTACCGTGACTAGGAGT+AGG | 0.509285 | 4:-83009254 | MsG0480023272.01.T01:three_prime_UTR |
| GTTTCTTTCAACCAAGCTGT+AGG | 0.516484 | 4:-83011512 | MsG0480023272.01.T01:CDS |
| CTCAACAGATGATTAAATCA+AGG | 0.523888 | 4:-83011619 | MsG0480023272.01.T01:CDS |
| ACATTATTTGTACCGTGACT+AGG | 0.525868 | 4:-83009260 | MsG0480023272.01.T01:three_prime_UTR |
| TGGAATCAAATCAGGGAAGA+TGG | 0.528633 | 4:-83011840 | MsG0480023272.01.T01:CDS |
| CAGGTATTAGGCAATGCAAA+AGG | 0.533740 | 4:-83009475 | MsG0480023272.01.T01:CDS |
| AAGGGCACGGTTAAAGAAAG+TGG | 0.535006 | 4:-83012296 | MsG0480023272.01.T01:CDS |
| CATGAGATCCAAAGGATCCA+TGG | 0.542594 | 4:-83012330 | MsG0480023272.01.T01:CDS |
| GCTGGTGTTGCCATTGCAAG+TGG | 0.549715 | 4:-83011395 | MsG0480023272.01.T01:CDS |
| CTTGATTTAATCATCTGTTG+AGG | 0.555444 | 4:+83011620 | None:intergenic |
| ATTGAACTCATATATAGGAT+AGG | 0.556882 | 4:-83009124 | MsG0480023272.01.T01:three_prime_UTR |
| AAAACATACCCCACTTGCAA+TGG | 0.557860 | 4:+83011385 | None:intergenic |
| CTGGTGTTGCCATTGCAAGT+GGG | 0.559180 | 4:-83011394 | MsG0480023272.01.T01:CDS |
| AACTCATATATAGGATAGGA+AGG | 0.560025 | 4:-83009120 | MsG0480023272.01.T01:three_prime_UTR |
| CTTTGGTACTCATCAAACAT+TGG | 0.563810 | 4:-83011770 | MsG0480023272.01.T01:CDS |
| ATCCATGGAAAATGAAAACA+AGG | 0.586176 | 4:-83012315 | MsG0480023272.01.T01:CDS |
| TGGTGTTGCCATTGCAAGTG+GGG | 0.597605 | 4:-83011393 | MsG0480023272.01.T01:intron |
| GTAATGGGAGTTATTGCATA+CGG | 0.599804 | 4:-83009373 | MsG0480023272.01.T01:CDS |
| AGGGCACGGTTAAAGAAAGT+GGG | 0.600109 | 4:-83012295 | MsG0480023272.01.T01:CDS |
| TCTTACAGCATGAGATCCAA+AGG | 0.603872 | 4:-83012338 | None:intergenic |
| CGTGACTAGGAGTAGGGGAG+AGG | 0.612413 | 4:-83009247 | MsG0480023272.01.T01:three_prime_UTR |
| CTCTCCCCTACTCCTAGTCA+CGG | 0.615615 | 4:+83009248 | None:intergenic |
| ACATTGCAAATCCAGGGAGG+AGG | 0.617057 | 4:-83011863 | MsG0480023272.01.T01:intron |
| GGAAAATGAAAACAAGGGCA+CGG | 0.640574 | 4:-83012309 | MsG0480023272.01.T01:CDS |
| CCATGCCAATAAAAGTGACA+GGG | 0.651043 | 4:+83009413 | None:intergenic |
| GTGTGGTTGCACCTACAGCT+TGG | 0.651188 | 4:+83011501 | None:intergenic |
| AACAATCTTAAAGAACACAA+TGG | 0.654847 | 4:+83011643 | None:intergenic |
| GAGGAGGTGGAATCAAATCA+GGG | 0.660705 | 4:-83011847 | MsG0480023272.01.T01:CDS |
| GATGATGGCTTGTGAAGTAG+AGG | 0.663104 | 4:-83009149 | MsG0480023272.01.T01:three_prime_UTR |
| AACAGCAGTGAAGAAAGGTG+TGG | 0.696609 | 4:+83011484 | None:intergenic |
| TGTACCGTGACTAGGAGTAG+GGG | 0.703797 | 4:-83009252 | MsG0480023272.01.T01:three_prime_UTR |
| GGGCACGGTTAAAGAAAGTG+GGG | 0.727668 | 4:-83012294 | MsG0480023272.01.T01:intron |
| CTGTCATGTGACACATTGTG+AGG | 0.735310 | 4:+83011690 | None:intergenic |
| TCCATGGAAAATGAAAACAA+GGG | 0.738782 | 4:-83012314 | MsG0480023272.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAAATTAAAATTATCATA+TGG | + | Chr4:83010477-83010496 | None:intergenic | 10.0% |
| !! | ATTATAATTGCTTATAATAT+AGG | - | Chr4:83010071-83010090 | MsG0480023272.01.T01:intron | 10.0% |
| !!! | TGATAATTTTAATTTGTTAT+TGG | - | Chr4:83010479-83010498 | MsG0480023272.01.T01:intron | 10.0% |
| !! | ATTAAGAATCCAAAAAAATA+TGG | + | Chr4:83011272-83011291 | None:intergenic | 15.0% |
| !! | TAAATAAGGGTAAAAAATAA+AGG | - | Chr4:83009441-83009460 | MsG0480023272.01.T01:CDS | 15.0% |
| !! | TTAAGAATCCAAAAAAATAT+GGG | + | Chr4:83011271-83011290 | None:intergenic | 15.0% |
| !! | TTTATAATCAATTAGCATTT+AGG | - | Chr4:83010341-83010360 | MsG0480023272.01.T01:intron | 15.0% |
| !!! | ACATTTTTTTAATATGTTGT+TGG | - | Chr4:83010515-83010534 | MsG0480023272.01.T01:intron | 15.0% |
| !!! | TAATTATATTTTTAGCTTTG+AGG | + | Chr4:83011656-83011675 | None:intergenic | 15.0% |
| !!! | TCGTGATTTTATTAAAATTA+CGG | + | Chr4:83009227-83009246 | None:intergenic | 15.0% |
| !! | AAACTTCAATAAAATCACAT+TGG | - | Chr4:83009290-83009309 | MsG0480023272.01.T01:three_prime_UTR | 20.0% |
| !! | AATTATGTTAATCAGGTATT+AGG | - | Chr4:83011902-83011921 | MsG0480023272.01.T01:intron | 20.0% |
| !! | ACTTATTTATCATGATTTGA+TGG | - | Chr4:83012217-83012236 | MsG0480023272.01.T01:intron | 20.0% |
| !! | ATTAAAATTATCATATGGTG+TGG | + | Chr4:83010472-83010491 | None:intergenic | 20.0% |
| !! | ATTATTATTACAACCTTCAA+TGG | - | Chr4:83011695-83011714 | MsG0480023272.01.T01:CDS | 20.0% |
| !! | CATAAAAATTGTCATGAATT+AGG | - | Chr4:83010418-83010437 | MsG0480023272.01.T01:intron | 20.0% |
| !! | CATTCTCACATATAAAAAAT+GGG | + | Chr4:83010876-83010895 | None:intergenic | 20.0% |
| !! | CTATGATTTCTAAATCATAT+TGG | - | Chr4:83010672-83010691 | MsG0480023272.01.T01:intron | 20.0% |
| !! | CTTATTTATCATGATTTGAT+GGG | - | Chr4:83012218-83012237 | MsG0480023272.01.T01:intron | 20.0% |
| !! | GGAAAAGAACATAAATTTAT+GGG | - | Chr4:83011485-83011504 | MsG0480023272.01.T01:CDS | 20.0% |
| !! | TAAGAATCCAAAAAAATATG+GGG | + | Chr4:83011270-83011289 | None:intergenic | 20.0% |
| !! | TATAAAAATACCAAACAATC+TGG | + | Chr4:83010327-83010346 | None:intergenic | 20.0% |
| !! | TCATTCTCACATATAAAAAA+TGG | + | Chr4:83010877-83010896 | None:intergenic | 20.0% |
| !! | TGGAAAAGAACATAAATTTA+TGG | - | Chr4:83011484-83011503 | MsG0480023272.01.T01:CDS | 20.0% |
| !! | TTGTTAAAAATTAATGTGAG+AGG | - | Chr4:83009374-83009393 | MsG0480023272.01.T01:CDS | 20.0% |
| !!! | ACATTTGGATTTTAATTTTC+TGG | - | Chr4:83010255-83010274 | MsG0480023272.01.T01:intron | 20.0% |
| !!! | ATTTTATAGAACTGTTCTAA+AGG | - | Chr4:83010751-83010770 | MsG0480023272.01.T01:intron | 20.0% |
| !!! | CTAATTCATGACAATTTTTA+TGG | + | Chr4:83010420-83010439 | None:intergenic | 20.0% |
| !!! | GAAATTATACATAGATGTTT+TGG | - | Chr4:83010125-83010144 | MsG0480023272.01.T01:intron | 20.0% |
| !!! | GTTTTTTTTGTTTGATTTGA+TGG | - | Chr4:83010022-83010041 | MsG0480023272.01.T01:intron | 20.0% |
| !!! | TGGTTTTGATTTTGAAATTA+TGG | - | Chr4:83010145-83010164 | MsG0480023272.01.T01:intron | 20.0% |
| !!! | TTTTGAAATTATGGATGTTT+TGG | - | Chr4:83010154-83010173 | MsG0480023272.01.T01:intron | 20.0% |
| ! | AAAGTAATTTCTTCAACACA+TGG | + | Chr4:83009159-83009178 | None:intergenic | 25.0% |
| ! | AACAATCTTAAAGAACACAA+TGG | + | Chr4:83009749-83009768 | None:intergenic | 25.0% |
| ! | AAGTAATTTCTTCAACACAT+GGG | + | Chr4:83009158-83009177 | None:intergenic | 25.0% |
| ! | AAGTACCTTATCTCAAATTA+TGG | - | Chr4:83009658-83009677 | MsG0480023272.01.T01:intron | 25.0% |
| ! | ACAAATCAAGCTCATAAATA+AGG | - | Chr4:83009427-83009446 | MsG0480023272.01.T01:CDS | 25.0% |
| ! | AGGAAATTGAACTCATATAT+AGG | - | Chr4:83012260-83012279 | MsG0480023272.01.T01:intron | 25.0% |
| ! | ATTAACTATATTTCCAGATC+TGG | + | Chr4:83010201-83010220 | None:intergenic | 25.0% |
| ! | ATTGAACTCATATATAGGAT+AGG | - | Chr4:83012265-83012284 | MsG0480023272.01.T01:intron | 25.0% |
| ! | CAAATCAAGCTCATAAATAA+GGG | - | Chr4:83009428-83009447 | MsG0480023272.01.T01:CDS | 25.0% |
| ! | CATATAAAAAATGGGATTCA+AGG | + | Chr4:83010868-83010887 | None:intergenic | 25.0% |
| ! | CTTTACTTTGCGATAAATAT+TGG | - | Chr4:83011187-83011206 | MsG0480023272.01.T01:intron | 25.0% |
| ! | TAAAAAAATGTACACCATGT+TGG | + | Chr4:83010506-83010525 | None:intergenic | 25.0% |
| ! | TATTTAGTTATTGTGAACTG+TGG | - | Chr4:83010702-83010721 | MsG0480023272.01.T01:intron | 25.0% |
| ! | TATTTATCGCAAAGTAAAGA+AGG | + | Chr4:83011186-83011205 | None:intergenic | 25.0% |
| ! | TCTGTCAAATTATGTTAATC+AGG | - | Chr4:83011895-83011914 | MsG0480023272.01.T01:intron | 25.0% |
| ! | TTCAATTGTGTATGAACAAT+GGG | + | Chr4:83011022-83011041 | None:intergenic | 25.0% |
| ! | TTTATTATTCAGCTCTTTGT+TGG | - | Chr4:83010779-83010798 | MsG0480023272.01.T01:intron | 25.0% |
| ! | TTTCAATTGTGTATGAACAA+TGG | + | Chr4:83011023-83011042 | None:intergenic | 25.0% |
| !! | ATGTACATAAAAGTCACTTT+CGG | + | Chr4:83011725-83011744 | None:intergenic | 25.0% |
| !! | CATCAGTGTATTAAAACTTT+TGG | + | Chr4:83011049-83011068 | None:intergenic | 25.0% |
| !! | TATAATATAGGTGTGTTGAT+TGG | - | Chr4:83010083-83010102 | MsG0480023272.01.T01:intron | 25.0% |
| !! | TGAAACCATAATTTGAGATA+AGG | + | Chr4:83009666-83009685 | None:intergenic | 25.0% |
| !! | TTCATGACAATTTTTATGGT+AGG | + | Chr4:83010416-83010435 | None:intergenic | 25.0% |
| !!! | AACATGAATTCTTTGTTGTT+TGG | + | Chr4:83009580-83009599 | None:intergenic | 25.0% |
| !!! | TGTTATTTCATCTATTCATG+TGG | - | Chr4:83010377-83010396 | MsG0480023272.01.T01:intron | 25.0% |
| !!! | TTTTAATATGTTGTTGGTGA+TGG | - | Chr4:83010521-83010540 | MsG0480023272.01.T01:intron | 25.0% |
| AAATACACGAGCATAACTAT+TGG | + | Chr4:83012085-83012104 | None:intergenic | 30.0% | |
| AACAAAAATACGACTGCAAT+TGG | + | Chr4:83011413-83011432 | None:intergenic | 30.0% | |
| AACTCATATATAGGATAGGA+AGG | - | Chr4:83012269-83012288 | MsG0480023272.01.T01:intron | 30.0% | |
| AGAGATAAAAAAGACAAACC+TGG | + | Chr4:83011598-83011617 | None:intergenic | 30.0% | |
| AGCAAACTTAACAAACTTCT+TGG | - | Chr4:83011544-83011563 | MsG0480023272.01.T01:CDS | 30.0% | |
| ATAAACACATTGCAAATCCA+GGG | - | Chr4:83009520-83009539 | MsG0480023272.01.T01:intron | 30.0% | |
| ATCCATGGAAAATGAAAACA+AGG | - | Chr4:83009074-83009093 | MsG0480023272.01.T01:three_prime_UTR | 30.0% | |
| ATGCTTAATAAGCTGTGAAA+GGG | + | Chr4:83010970-83010989 | None:intergenic | 30.0% | |
| CAATATCTCTCTCAAGTATT+TGG | - | Chr4:83009852-83009871 | MsG0480023272.01.T01:intron | 30.0% | |
| CTCAACAGATGATTAAATCA+AGG | - | Chr4:83009770-83009789 | MsG0480023272.01.T01:intron | 30.0% | |
| CTTGATTTAATCATCTGTTG+AGG | + | Chr4:83009772-83009791 | None:intergenic | 30.0% | |
| GTGTTCTCCTTAATGATATT+TGG | + | Chr4:83010948-83010967 | None:intergenic | 30.0% | |
| TAAAATCACGATGATTCATG+TGG | - | Chr4:83009236-83009255 | MsG0480023272.01.T01:three_prime_UTR | 30.0% | |
| TAGAAATTGACCATAACTTG+AGG | - | Chr4:83011235-83011254 | MsG0480023272.01.T01:intron | 30.0% | |
| TATGCTTAATAAGCTGTGAA+AGG | + | Chr4:83010971-83010990 | None:intergenic | 30.0% | |
| TATGGTCAATTTCTATAGCT+TGG | + | Chr4:83011230-83011249 | None:intergenic | 30.0% | |
| TCCATGGAAAATGAAAACAA+GGG | - | Chr4:83009075-83009094 | MsG0480023272.01.T01:three_prime_UTR | 30.0% | |
| TTAGCCACCAAATATCATTA+AGG | - | Chr4:83010938-83010957 | MsG0480023272.01.T01:intron | 30.0% | |
| TTCTCCTTAATGATATTTGG+TGG | + | Chr4:83010945-83010964 | None:intergenic | 30.0% | |
| ! | AGCGTGATATCTAAAACATT+CGG | + | Chr4:83011458-83011477 | None:intergenic | 30.0% |
| ! | CATGTTCATATGTTTTCTTG+TGG | - | Chr4:83009594-83009613 | MsG0480023272.01.T01:intron | 30.0% |
| ! | GCATTTTACTTTCTTCTGAA+GGG | - | Chr4:83010629-83010648 | MsG0480023272.01.T01:intron | 30.0% |
| !! | AATTTGTTATTGGACCAACA+TGG | - | Chr4:83010489-83010508 | MsG0480023272.01.T01:intron | 30.0% |
| !!! | ACTTTGAGCTTTGTTTTTTG+TGG | - | Chr4:83009814-83009833 | MsG0480023272.01.T01:intron | 30.0% |
| !!! | CTTTGAGCTTTGTTTTTTGT+GGG | - | Chr4:83009815-83009834 | MsG0480023272.01.T01:intron | 30.0% |
| !!! | TTTAGCTACTTTTAAGAGAG+AGG | - | Chr4:83009936-83009955 | MsG0480023272.01.T01:intron | 30.0% |
| !!! | TTTTGAAACATTTGCCTACA+AGG | + | Chr4:83012295-83012314 | None:intergenic | 30.0% |
| AACAAAGCTGAGTTAGCAAT+AGG | + | Chr4:83011848-83011867 | None:intergenic | 35.0% | |
| AACTGCAAATCTGTGACATT+TGG | - | Chr4:83010240-83010259 | MsG0480023272.01.T01:intron | 35.0% | |
| AAGCAAAAGCAATGTTAAGC+TGG | + | Chr4:83011155-83011174 | None:intergenic | 35.0% | |
| ACATTATTTGTACCGTGACT+AGG | - | Chr4:83012129-83012148 | MsG0480023272.01.T01:intron | 35.0% | |
| AGCTTTCAAATCTGTTCTTC+AGG | - | Chr4:83010606-83010625 | MsG0480023272.01.T01:intron | 35.0% | |
| ATCAAGGTCACAGTTCTTAA+AGG | - | Chr4:83009786-83009805 | MsG0480023272.01.T01:intron | 35.0% | |
| ATCATGATTTGATGGGATGA+TGG | - | Chr4:83012225-83012244 | MsG0480023272.01.T01:intron | 35.0% | |
| CTTTGGTACTCATCAAACAT+TGG | - | Chr4:83009619-83009638 | MsG0480023272.01.T01:intron | 35.0% | |
| GAATCCAAAAAAATATGGGG+AGG | + | Chr4:83011267-83011286 | None:intergenic | 35.0% | |
| GATAAACACATTGCAAATCC+AGG | - | Chr4:83009519-83009538 | MsG0480023272.01.T01:intron | 35.0% | |
| GATGATTCATGTGGTGATAT+TGG | - | Chr4:83009245-83009264 | MsG0480023272.01.T01:three_prime_UTR | 35.0% | |
| GCTTTCAAATCTGTTCTTCA+GGG | - | Chr4:83010607-83010626 | MsG0480023272.01.T01:intron | 35.0% | |
| TGCATAATCCTCGTTACATA+TGG | - | Chr4:83011302-83011321 | MsG0480023272.01.T01:intron | 35.0% | |
| TTAGATATCACGCTATCACT+TGG | - | Chr4:83011464-83011483 | MsG0480023272.01.T01:CDS | 35.0% | |
| TTGCATACGGAGAAACAAAA+AGG | - | Chr4:83012029-83012048 | MsG0480023272.01.T01:intron | 35.0% | |
| ! | CAATAAAAGTGACAGGGTTT+TGG | + | Chr4:83011973-83011992 | None:intergenic | 35.0% |
| ! | GGCATTTTACTTTCTTCTGA+AGG | - | Chr4:83010628-83010647 | MsG0480023272.01.T01:intron | 35.0% |
| ! | GTAATGGGAGTTATTGCATA+CGG | - | Chr4:83012016-83012035 | MsG0480023272.01.T01:intron | 35.0% |
| ! | TATATTTCCAGATCTGGAGT+GGG | + | Chr4:83010195-83010214 | None:intergenic | 35.0% |
| ! | TATGTTTTCTTGTGGCTCTT+TGG | - | Chr4:83009602-83009621 | MsG0480023272.01.T01:intron | 35.0% |
| ! | TTCATTTTCCATGGATCCTT+TGG | + | Chr4:83009070-83009089 | MsG0480023271.01.T01:three_prime_UTR | 35.0% |
| !!! | CAAAACCCTGTCACTTTTAT+TGG | - | Chr4:83011971-83011990 | MsG0480023272.01.T01:intron | 35.0% |
| !!! | GTGCTCATGATTTTTAGTTG+TGG | + | Chr4:83011626-83011645 | None:intergenic | 35.0% |
| AAAACATACCCCACTTGCAA+TGG | + | Chr4:83010007-83010026 | None:intergenic | 40.0% | |
| AATCCAAACAAGTGAAACCC+AGG | + | Chr4:83010556-83010575 | None:intergenic | 40.0% | |
| AGATTTGAAAGCTCTTGCAG+CGG | + | Chr4:83010599-83010618 | None:intergenic | 40.0% | |
| CAGGTATTAGGCAATGCAAA+AGG | - | Chr4:83011914-83011933 | MsG0480023272.01.T01:intron | 40.0% | |
| CATACGGAGAAACAAAAAGG+AGG | - | Chr4:83012032-83012051 | MsG0480023272.01.T01:intron | 40.0% | |
| CCAAAAAAATATGGGGAGGA+AGG | + | Chr4:83011263-83011282 | None:intergenic | 40.0% | |
| CCATGCCAATAAAAGTGACA+GGG | + | Chr4:83011979-83011998 | None:intergenic | 40.0% | |
| CTATATTTCCAGATCTGGAG+TGG | + | Chr4:83010196-83010215 | None:intergenic | 40.0% | |
| CTGCAATTGGAGACATATAC+AGG | + | Chr4:83011400-83011419 | None:intergenic | 40.0% | |
| GCAAAAACAGCAGTGAAGAA+AGG | + | Chr4:83009913-83009932 | None:intergenic | 40.0% | |
| GGAAAATGAAAACAAGGGCA+CGG | - | Chr4:83009080-83009099 | MsG0480023272.01.T01:three_prime_UTR | 40.0% | |
| GGCTACTCAGTTACTGTAAT+GGG | - | Chr4:83012001-83012020 | MsG0480023272.01.T01:intron | 40.0% | |
| GTTCTTTGCCATATGTAACG+AGG | + | Chr4:83011313-83011332 | None:intergenic | 40.0% | |
| GTTTCTTTCAACCAAGCTGT+AGG | - | Chr4:83009877-83009896 | MsG0480023272.01.T01:intron | 40.0% | |
| TAGCAGATAGCCAGATTGTT+TGG | - | Chr4:83010314-83010333 | MsG0480023272.01.T01:intron | 40.0% | |
| TCATCCATTTCAACCTACCA+GGG | - | Chr4:83011349-83011368 | MsG0480023272.01.T01:intron | 40.0% | |
| TGACACATTGTGAGGAAGAT+TGG | + | Chr4:83009694-83009713 | None:intergenic | 40.0% | |
| TGGAATCAAATCAGGGAAGA+TGG | - | Chr4:83009549-83009568 | MsG0480023272.01.T01:intron | 40.0% | |
| TGGCTACTCAGTTACTGTAA+TGG | - | Chr4:83012000-83012019 | MsG0480023272.01.T01:intron | 40.0% | |
| TTCATCCATTTCAACCTACC+AGG | - | Chr4:83011348-83011367 | MsG0480023272.01.T01:intron | 40.0% | |
| ! | TAAGTTTGCTCCATATGCTG+CGG | + | Chr4:83011534-83011553 | None:intergenic | 40.0% |
| !! | AATATGTTGTTGGTGATGGC+AGG | - | Chr4:83010525-83010544 | MsG0480023272.01.T01:intron | 40.0% |
| !! | ATATGTTGTTGGTGATGGCA+GGG | - | Chr4:83010526-83010545 | MsG0480023272.01.T01:intron | 40.0% |
| !! | CTACTTTTAAGAGAGAGGCT+TGG | - | Chr4:83009941-83009960 | MsG0480023272.01.T01:intron | 40.0% |
| !! | GAGCTTGATTTGTCGTAACA+CGG | + | Chr4:83009420-83009439 | None:intergenic | 40.0% |
| !!! | CCTTCCTCCCCATATTTTTT+TGG | - | Chr4:83011260-83011279 | MsG0480023272.01.T01:intron | 40.0% |
| !!! | CTTTGTTTTTTGTGGGTCTG+TGG | - | Chr4:83009822-83009841 | MsG0480023272.01.T01:intron | 40.0% |
| !!! | GCCCTTGTTTTCATTTTCCA+TGG | + | Chr4:83009079-83009098 | MsG0480023271.01.T01:three_prime_UTR | 40.0% |
| AACACATTGCAAATCCAGGG+AGG | - | Chr4:83009523-83009542 | MsG0480023272.01.T01:intron | 45.0% | |
| AACAGCAGTGAAGAAAGGTG+TGG | + | Chr4:83009908-83009927 | None:intergenic | 45.0% | |
| AGGGCACGGTTAAAGAAAGT+GGG | - | Chr4:83009094-83009113 | MsG0480023272.01.T01:three_prime_UTR | 45.0% | |
| CATTGAGTTCAACTTCTCCC+TGG | + | Chr4:83011369-83011388 | None:intergenic | 45.0% | |
| CTGTCATGTGACACATTGTG+AGG | + | Chr4:83009702-83009721 | None:intergenic | 45.0% | |
| GAGGAGGTGGAATCAAATCA+GGG | - | Chr4:83009542-83009561 | MsG0480023272.01.T01:intron | 45.0% | |
| GCCATGCCAATAAAAGTGAC+AGG | + | Chr4:83011980-83011999 | None:intergenic | 45.0% | |
| TACAAGTGCTTTGACACTCC+AGG | - | Chr4:83011577-83011596 | MsG0480023272.01.T01:CDS | 45.0% | |
| TCGTAACACGGTGAGTTTGT+CGG | + | Chr4:83009408-83009427 | None:intergenic | 45.0% | |
| TTGTACCGTGACTAGGAGTA+GGG | - | Chr4:83012136-83012155 | MsG0480023272.01.T01:intron | 45.0% | |
| TTTCTGGATCTGCACTCATC+TGG | - | Chr4:83010271-83010290 | MsG0480023272.01.T01:intron | 45.0% | |
| TTTGTACCGTGACTAGGAGT+AGG | - | Chr4:83012135-83012154 | MsG0480023272.01.T01:intron | 45.0% | |
| ! | AAGGGCACGGTTAAAGAAAG+TGG | - | Chr4:83009093-83009112 | MsG0480023272.01.T01:three_prime_UTR | 45.0% |
| ! | ATAGGATAGGAAGGCCTTGT+AGG | - | Chr4:83012278-83012297 | MsG0480023272.01.T01:intron | 45.0% |
| ! | CACTTTCGGTTTGCCATTGA+AGG | + | Chr4:83011711-83011730 | None:intergenic | 45.0% |
| ! | GATGATGGCTTGTGAAGTAG+AGG | - | Chr4:83012240-83012259 | MsG0480023272.01.T01:intron | 45.0% |
| ! | GTTGCCTGCAGTAGTTTTCA+TGG | - | Chr4:83011430-83011449 | MsG0480023272.01.T01:CDS | 45.0% |
| ! | TTCTCCCTGGTAGGTTGAAA+TGG | + | Chr4:83011356-83011375 | None:intergenic | 45.0% |
| !!! | AAGTGACAGGGTTTTGGAAC+AGG | + | Chr4:83011967-83011986 | None:intergenic | 45.0% |
| !!! | CCCTGTCACTTTTATTGGCA+TGG | - | Chr4:83011976-83011995 | MsG0480023272.01.T01:intron | 45.0% |
| !!! | GTCACTTTTATTGGCATGGC+TGG | - | Chr4:83011980-83011999 | MsG0480023272.01.T01:intron | 45.0% |
| !!! | GTTTTTTGTGGGTCTGTGGT+TGG | - | Chr4:83009826-83009845 | MsG0480023272.01.T01:intron | 45.0% |
| ACATTGCAAATCCAGGGAGG+AGG | - | Chr4:83009526-83009545 | MsG0480023272.01.T01:intron | 50.0% | |
| ATGGCAACACCAGCAACAAC+AGG | + | Chr4:83009988-83010007 | None:intergenic | 50.0% | |
| ATTTGATTCCACCTCCTCCC+TGG | + | Chr4:83009540-83009559 | None:intergenic | 50.0% | |
| CCATAATCCCACTCCAGATC+TGG | - | Chr4:83010185-83010204 | MsG0480023272.01.T01:intron | 50.0% | |
| CTTAACTCAGCCGCAGCATA+TGG | - | Chr4:83011521-83011540 | MsG0480023272.01.T01:CDS | 50.0% | |
| GAGCCTGGGTTTCACTTGTT+TGG | - | Chr4:83010550-83010569 | MsG0480023272.01.T01:intron | 50.0% | |
| GAGTTCAACTTCTCCCTGGT+AGG | + | Chr4:83011365-83011384 | None:intergenic | 50.0% | |
| GCTCTTGTTCCTGTTGTTGC+TGG | - | Chr4:83009976-83009995 | MsG0480023272.01.T01:intron | 50.0% | |
| GGAGGAGGTGGAATCAAATC+AGG | - | Chr4:83009541-83009560 | MsG0480023272.01.T01:intron | 50.0% | |
| GGCTCCATGAAAACTACTGC+AGG | + | Chr4:83011437-83011456 | None:intergenic | 50.0% | |
| GGGCACGGTTAAAGAAAGTG+GGG | - | Chr4:83009095-83009114 | MsG0480023272.01.T01:three_prime_UTR | 50.0% | |
| TGTACCGTGACTAGGAGTAG+GGG | - | Chr4:83012137-83012156 | MsG0480023272.01.T01:intron | 50.0% | |
| ! | CCAGATCTGGAGTGGGATTA+TGG | + | Chr4:83010188-83010207 | None:intergenic | 50.0% |
| ! | TTTTGTGGGTCTGTGGTTGG+TGG | - | Chr4:83009829-83009848 | MsG0480023272.01.T01:intron | 50.0% |
| !! | CTGGTGTTGCCATTGCAAGT+GGG | - | Chr4:83009995-83010014 | MsG0480023272.01.T01:intron | 50.0% |
| !! | GAGGAAGGCACCTCAAGTTA+TGG | + | Chr4:83011248-83011267 | None:intergenic | 50.0% |
| !! | TGGTGTTGCCATTGCAAGTG+GGG | - | Chr4:83009996-83010015 | MsG0480023272.01.T01:intron | 50.0% |
| CTCTCCCCTACTCCTAGTCA+CGG | + | Chr4:83012144-83012163 | None:intergenic | 55.0% | |
| CTCTTGCAGCGGTTGCACTT+AGG | + | Chr4:83010588-83010607 | None:intergenic | 55.0% | |
| GTGTGGTTGCACCTACAGCT+TGG | + | Chr4:83009891-83009910 | None:intergenic | 55.0% | |
| TTGCAAATCCAGGGAGGAGG+TGG | - | Chr4:83009529-83009548 | MsG0480023272.01.T01:intron | 55.0% | |
| !! | GCTGGTGTTGCCATTGCAAG+TGG | - | Chr4:83009994-83010013 | MsG0480023272.01.T01:intron | 55.0% |
| CGTGACTAGGAGTAGGGGAG+AGG | - | Chr4:83012142-83012161 | MsG0480023272.01.T01:intron | 60.0% | |
| ! | GGTGATGGCAGGGTGAGCCT+GGG | - | Chr4:83010536-83010555 | MsG0480023272.01.T01:intron | 65.0% |
| !! | TGGTGATGGCAGGGTGAGCC+TGG | - | Chr4:83010535-83010554 | MsG0480023272.01.T01:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 83009060 | 83012351 | 83009060 | ID=MsG0480023272.01;Name=MsG0480023272.01 |
| Chr4 | mRNA | 83009060 | 83012351 | 83009060 | ID=MsG0480023272.01.T01;Parent=MsG0480023272.01;Name=MsG0480023272.01.T01;_AED=0.41;_eAED=0.41;_QI=0|0|0.33|1|1|1|3|288|226 |
| Chr4 | exon | 83009060 | 83009494 | 83009060 | ID=MsG0480023272.01.T01:exon:5789;Parent=MsG0480023272.01.T01 |
| Chr4 | exon | 83011394 | 83011870 | 83011394 | ID=MsG0480023272.01.T01:exon:5788;Parent=MsG0480023272.01.T01 |
| Chr4 | exon | 83012295 | 83012351 | 83012295 | ID=MsG0480023272.01.T01:exon:5787;Parent=MsG0480023272.01.T01 |
| Chr4 | CDS | 83012295 | 83012351 | 83012295 | ID=MsG0480023272.01.T01:cds;Parent=MsG0480023272.01.T01 |
| Chr4 | CDS | 83011394 | 83011870 | 83011394 | ID=MsG0480023272.01.T01:cds;Parent=MsG0480023272.01.T01 |
| Chr4 | CDS | 83009348 | 83009494 | 83009348 | ID=MsG0480023272.01.T01:cds;Parent=MsG0480023272.01.T01 |
| Chr4 | three_prime_UTR | 83009060 | 83009347 | 83009060 | ID=MsG0480023272.01.T01:three_prime_utr;Parent=MsG0480023272.01.T01 |
| Gene Sequence |
| Protein sequence |
