AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680035830.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035830.01.T01 MTR_6g090280 94.963 536 23 1 1 532 88 623 0.0 1000
MsG0680035830.01.T01 MTR_6g090280 94.526 475 22 1 62 532 1 475 0.0 931
MsG0680035830.01.T01 MTR_6g090280 96.000 400 16 0 1 400 88 487 0.0 745
MsG0680035830.01.T01 MTR_3g087950 51.955 537 241 5 1 532 58 582 7.88e-177 511
MsG0680035830.01.T01 MTR_3g466000 49.534 537 254 5 1 532 53 577 1.01e-170 495
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035830.01.T01 AT4G29210 61.510 543 196 4 1 532 97 637 0.0 690
MsG0680035830.01.T01 AT4G29210 66.085 401 135 1 1 400 97 497 0.0 574
MsG0680035830.01.T01 AT4G39640 50.746 536 243 6 1 530 50 570 0.0 531
MsG0680035830.01.T01 AT4G39640 50.746 536 243 6 1 530 50 570 0.0 531
MsG0680035830.01.T01 AT4G39650 50.929 538 241 6 1 530 54 576 0.0 525
MsG0680035830.01.T01 AT1G69820 57.674 215 89 1 231 443 1 215 5.81e-85 263

Find 160 sgRNAs with CRISPR-Local

Find 311 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGATGACCTCTTTCTTTC+AGG 0.132717 6:+112930195 None:intergenic
TTGAACATTAATAGGAAAAT+TGG 0.202572 6:-112930113 MsG0680035830.01.T01:CDS
AAACACCTTTGAACATTAAT+AGG 0.206872 6:-112930121 MsG0680035830.01.T01:CDS
GCTGGACAACCGCCCTTTCT+TGG 0.218253 6:+112930038 None:intergenic
TTTCTTAATCATTTCATCTT+AGG 0.220225 6:-112930430 MsG0680035830.01.T01:CDS
GACCAATTGGTCGGGGTAAT+TGG 0.230354 6:-112930496 MsG0680035830.01.T01:CDS
ATTAATGTTCAAAGGTGTTT+TGG 0.235557 6:+112930124 None:intergenic
CCTAATGGAACTTTGTTAAA+AGG 0.238512 6:-112931637 MsG0680035830.01.T01:CDS
ACAACTGTAAACAGGCATTT+TGG 0.272133 6:-112930821 MsG0680035830.01.T01:CDS
AATAGTTTGTGCAAAAGATT+TGG 0.289247 6:+112931083 None:intergenic
GCCTTGTCGGTGGGAGTTCC+TGG 0.301944 6:-112931841 MsG0680035830.01.T01:CDS
AATACCTTTGTAATGATAAT+AGG 0.314574 6:+112930650 None:intergenic
GATGCGGCAAAGGGAAATTT+AGG 0.331622 6:-112931210 MsG0680035830.01.T01:CDS
GATAATGGATTCTCCTTTGT+TGG 0.333695 6:-112933987 MsG0680035830.01.T01:five_prime_UTR
ATGTCGTGTTATCGAGTATT+TGG 0.336114 6:+112931055 None:intergenic
TGGGAAAAGCTTAGAGATAT+TGG 0.346608 6:-112931587 MsG0680035830.01.T01:CDS
GATCCCGAAGCTAAGTTCTT+AGG 0.349300 6:-112931865 MsG0680035830.01.T01:CDS
GGAAGGATGAATAAAGTGTT+TGG 0.351583 6:-112929863 MsG0680035830.01.T01:three_prime_UTR
AAACTTTCTGTTGAATTTGT+TGG 0.354703 6:+112933943 None:intergenic
AAAAGATTTGGAAAGCATTT+CGG 0.357293 6:+112931095 None:intergenic
CATAACTGTCCAAGATGTTT+AGG 0.357912 6:+112931241 None:intergenic
AGAAATATTTATGCACCTAA+TGG 0.361307 6:-112931652 MsG0680035830.01.T01:CDS
ATATAAATTCGTTATTTAAC+CGG 0.362235 6:-112929947 MsG0680035830.01.T01:three_prime_UTR
TTGGAAGAAACATGATGATT+TGG 0.367872 6:+112933962 None:intergenic
CTGGACAACCGCCCTTTCTT+GGG 0.375400 6:+112930039 None:intergenic
CTATCTTATGTAGCTATTAC+CGG 0.380165 6:-112930291 MsG0680035830.01.T01:intron
GTTTGCTATCCGAATGAACT+TGG 0.386944 6:-112931154 MsG0680035830.01.T01:CDS
CGCTCCTTTAGCTGCTTCAC+AGG 0.391297 6:-112932566 MsG0680035830.01.T01:intron
TGGAACACTCGCTCTTTCTC+TGG 0.400127 6:-112931383 MsG0680035830.01.T01:intron
AAATTTCCCTTTGCCGCATC+CGG 0.401484 6:+112931213 None:intergenic
TGGTTGTGACAGCAACAAAA+AGG 0.404815 6:+112933903 None:intergenic
TCCTATAGCTGGTTGGAATA+AGG 0.404922 6:+112931762 None:intergenic
CTAAACATCTTGGACAGTTA+TGG 0.406327 6:-112931240 MsG0680035830.01.T01:CDS
TCAATAAAGTTTGTTGGAGC+TGG 0.406868 6:+112930704 None:intergenic
GTGGCTGCTGCATTATGCGC+TGG 0.410546 6:-112932688 MsG0680035830.01.T01:CDS
TGATTTATTTATACTGCAGC+TGG 0.413156 6:+112930020 None:intergenic
TTTGGTTCAATAAAGTTTGT+TGG 0.416128 6:+112930698 None:intergenic
GGAGTTCCTGGTGAGTTAGC+TGG 0.418179 6:-112931829 MsG0680035830.01.T01:CDS
ATAATGGATTCTCCTTTGTT+GGG 0.419608 6:-112933986 MsG0680035830.01.T01:five_prime_UTR
ATTCCCTCCAGATTACTATA+TGG 0.419853 6:-112931034 MsG0680035830.01.T01:CDS
TGGAGCTGGAGGTAGTTTAT+CGG 0.420316 6:+112930718 None:intergenic
TTCAATAACATGTGCCTGAT+TGG 0.423332 6:+112932804 None:intergenic
TCTTCCTCAGAATCAGATAA+TGG 0.424614 6:-112934002 MsG0680035830.01.T01:five_prime_UTR
CATGTTATTGAATCGGAACT+TGG 0.426522 6:-112932793 MsG0680035830.01.T01:five_prime_UTR
CATATCATAAGCTTGTGCTT+TGG 0.431025 6:+112932597 None:intergenic
GGCACCTAAGAACTTAGCTT+CGG 0.431120 6:+112931861 None:intergenic
CGCCAATTACCCCGACCAAT+TGG 0.433200 6:+112930494 None:intergenic
CAGTTGGTGTTTCAATGCTT+AGG 0.435205 6:-112932738 MsG0680035830.01.T01:exon
CACTGACAACAACTGTAAAC+AGG 0.435211 6:-112930829 MsG0680035830.01.T01:CDS
GGGATTCGTTCTACTTCAAC+TGG 0.435789 6:-112930794 MsG0680035830.01.T01:CDS
CACCTGTCCATATAGTAATC+TGG 0.445513 6:+112931027 None:intergenic
TAAGTTCTTAGGTGCCTTGT+CGG 0.447885 6:-112931854 MsG0680035830.01.T01:CDS
CAATGACCGGACAAATGTTC+CGG 0.456505 6:+112929928 None:intergenic
CAAGCTTCAAGTGGCATTGG+AGG 0.459603 6:-112932655 MsG0680035830.01.T01:CDS
TTCCAAGCTTCAAGTGGCAT+TGG 0.459832 6:-112932658 MsG0680035830.01.T01:CDS
ACCTTATTCCAACCAGCTAT+AGG 0.467125 6:-112931763 MsG0680035830.01.T01:CDS
ATGTGTAGTAATATAGAACT+TGG 0.470004 6:-112931607 MsG0680035830.01.T01:CDS
TAGCTGGCCTTCATGCAGCC+TGG 0.471043 6:-112931813 MsG0680035830.01.T01:CDS
GGTCTTAGAACCGCGTCTAA+AGG 0.471927 6:+112930400 None:intergenic
GTTTCAATGCTTAGGCTTGG+TGG 0.472280 6:-112932730 MsG0680035830.01.T01:exon
GGTAGGATGACCAATTGGTC+GGG 0.472855 6:-112930504 MsG0680035830.01.T01:intron
GGAGCTGGAGGTAGTTTATC+GGG 0.474724 6:+112930719 None:intergenic
TTCTTAGGTGCCTTGTCGGT+GGG 0.475216 6:-112931850 MsG0680035830.01.T01:CDS
CTCCAATGCCACTTGAAGCT+TGG 0.477295 6:+112932656 None:intergenic
ATTGCATTTAGCATAAGATA+AGG 0.480608 6:+112932915 None:intergenic
TTGTTCCATGATCTCTAAGT+TGG 0.481847 6:+112930891 None:intergenic
TGGAGCCAACTTAGAGATCA+TGG 0.482237 6:-112930896 MsG0680035830.01.T01:CDS
AGAAATACTTGAGTCACTGC+TGG 0.487765 6:+112930448 None:intergenic
TATTGTCGTCAATGATGAAA+TGG 0.487853 6:-112930771 MsG0680035830.01.T01:CDS
TCGAGCTTTCAGAAGAAAGT+AGG 0.488027 6:-112930223 MsG0680035830.01.T01:CDS
TGGACGTCCGGATGCGGCAA+AGG 0.495197 6:-112931220 MsG0680035830.01.T01:CDS
TGAACAGGTCCTAAACATCT+TGG 0.496933 6:-112931250 MsG0680035830.01.T01:intron
CTTACTCCTAGCCCAACAAC+TGG 0.497093 6:+112932886 None:intergenic
GTAAAGGATGTCGCAGAAGT+TGG 0.501496 6:-112931514 MsG0680035830.01.T01:CDS
GCACCTAAGAACTTAGCTTC+GGG 0.506268 6:+112931862 None:intergenic
CAGTGATACCGCATTTCTAT+CGG 0.506581 6:+112930847 None:intergenic
TCAGGCACATGTTATTGAAT+CGG 0.506608 6:-112932800 MsG0680035830.01.T01:five_prime_UTR
CGGCATCTACAACACATGTA+TGG 0.507054 6:+112930867 None:intergenic
GGTGTTTCAATGCTTAGGCT+TGG 0.510369 6:-112932733 MsG0680035830.01.T01:exon
AGCAGTAAGTGACCCAAGAA+AGG 0.511217 6:-112930051 MsG0680035830.01.T01:CDS
GAATAGATTGTAACAATGAC+CGG 0.511788 6:+112929915 None:intergenic
ACTTTATTGAACCAAACAAA+AGG 0.512088 6:-112930691 MsG0680035830.01.T01:CDS
GCTTCAAGTGGCATTGGAGG+CGG 0.513180 6:-112932652 MsG0680035830.01.T01:CDS
CTCCAGATTACTATATGGAC+AGG 0.513873 6:-112931029 MsG0680035830.01.T01:intron
CTTGGACAGTTATGGACGTC+CGG 0.513907 6:-112931232 MsG0680035830.01.T01:CDS
GCAATGACTGTCAATGTAAT+GGG 0.514126 6:-112931439 MsG0680035830.01.T01:CDS
TGCAATGACTGTCAATGTAA+TGG 0.515938 6:-112931440 MsG0680035830.01.T01:CDS
GTTCTTAGGTGCCTTGTCGG+TGG 0.517069 6:-112931851 MsG0680035830.01.T01:CDS
TGGTAGGATGACCAATTGGT+CGG 0.518968 6:-112930505 MsG0680035830.01.T01:intron
CTTTACTAACTTCTCACCAA+TGG 0.521616 6:+112931531 None:intergenic
TTAGAGATATTGGCCGAGGA+AGG 0.522470 6:-112931577 MsG0680035830.01.T01:CDS
GGGGTAATTGGCGCAAGCGG+TGG 0.523871 6:-112930484 MsG0680035830.01.T01:CDS
CAAACCTGTGAAGCAGCTAA+AGG 0.526128 6:+112932562 None:intergenic
GCTAGGTATTCTTCGAGTGT+AGG 0.528040 6:+112931712 None:intergenic
ATTTAACCGGAACATTTGTC+CGG 0.529932 6:-112929934 MsG0680035830.01.T01:three_prime_UTR
GCTTTCTACAATGGAACCAT+TGG 0.530567 6:-112931547 MsG0680035830.01.T01:CDS
AATGGAACTTTGTTAAAAGG+AGG 0.531771 6:-112931634 MsG0680035830.01.T01:CDS
AGAGCGAGTGTTCCACTTGA+AGG 0.532850 6:+112931391 None:intergenic
TAAGAACTTAGCTTCGGGAT+CGG 0.533300 6:+112931867 None:intergenic
TAGACGCGGTTCTAAGACCA+AGG 0.538451 6:-112930396 MsG0680035830.01.T01:CDS
GGACGTCCGGATGCGGCAAA+GGG 0.539848 6:-112931219 MsG0680035830.01.T01:CDS
TTTGCTATCCGAATGAACTT+GGG 0.542750 6:-112931153 MsG0680035830.01.T01:CDS
CAGTTATGGACGTCCGGATG+CGG 0.543584 6:-112931226 MsG0680035830.01.T01:CDS
ATGGAACTTTGTTAAAAGGA+GGG 0.545372 6:-112931633 MsG0680035830.01.T01:CDS
GAAAGCTTGTGGCCCTTCCT+CGG 0.549195 6:+112931564 None:intergenic
TGTAATGATAATAGGAGTCA+TGG 0.551561 6:+112930658 None:intergenic
CATGCAGCCTGGTTGAAACA+TGG 0.558759 6:-112931802 MsG0680035830.01.T01:CDS
GTCGGGGTAATTGGCGCAAG+CGG 0.560004 6:-112930487 MsG0680035830.01.T01:CDS
GTTGTTGGGCTAGGAGTAAG+AGG 0.560853 6:-112932883 MsG0680035830.01.T01:five_prime_UTR
TAGAGATATTGGCCGAGGAA+GGG 0.564292 6:-112931576 MsG0680035830.01.T01:CDS
ACATGCTGTTGATGCTGCAG+TGG 0.566572 6:-112932707 MsG0680035830.01.T01:CDS
GCTTTGGTAGGATGACCAAT+TGG 0.567094 6:-112930509 MsG0680035830.01.T01:intron
GCAGTAAGTGACCCAAGAAA+GGG 0.568353 6:-112930050 MsG0680035830.01.T01:CDS
CATTGGTGAGAAGTTAGTAA+AGG 0.573031 6:-112931530 MsG0680035830.01.T01:CDS
AAAAGATAATGAGCGATCCT+GGG 0.573268 6:-112931678 MsG0680035830.01.T01:CDS
TTGCTATCCGAATGAACTTG+GGG 0.574297 6:-112931152 MsG0680035830.01.T01:CDS
CAATCTTCCATGTTTCAACC+AGG 0.574776 6:+112931795 None:intergenic
TGTGTAGTAATATAGAACTT+GGG 0.577381 6:-112931606 MsG0680035830.01.T01:CDS
ATAAAGTTTGTTGGAGCTGG+AGG 0.577647 6:+112930707 None:intergenic
AGTGTTCCACTTGAAGGAGG+TGG 0.579625 6:+112931397 None:intergenic
GATGCTCGGTGTTCTGCAGT+TGG 0.579738 6:-112932754 MsG0680035830.01.T01:five_prime_UTR
AAGGATGTCGCAGAAGTTGG+TGG 0.583060 6:-112931511 MsG0680035830.01.T01:CDS
TGGAACTTTGTTAAAAGGAG+GGG 0.583276 6:-112931632 MsG0680035830.01.T01:CDS
TCGCAAGTCCTATAGCTGGT+TGG 0.585935 6:+112931755 None:intergenic
GGTTGGAATAAGGTCTTCCA+TGG 0.589767 6:+112931772 None:intergenic
GGGCCACAAGCTTTCTACAA+TGG 0.590382 6:-112931556 MsG0680035830.01.T01:CDS
GGAGGATTTACGAAATTACA+AGG 0.592285 6:-112931476 MsG0680035830.01.T01:CDS
GTTCCATTGTAGAAAGCTTG+TGG 0.594214 6:+112931553 None:intergenic
CATCAACTGTGTGCATGTCA+AGG 0.594909 6:-112930179 MsG0680035830.01.T01:CDS
GTAGGATGACCAATTGGTCG+GGG 0.600898 6:-112930503 MsG0680035830.01.T01:intron
TTGTTGCAGCAGATGATGCT+CGG 0.601090 6:-112932768 MsG0680035830.01.T01:five_prime_UTR
GTAATGGGATATACTATACA+TGG 0.601724 6:-112931424 MsG0680035830.01.T01:CDS
GGGAGATATATCAGTAGGTG+TGG 0.603874 6:+112930739 None:intergenic
GAATCCATTATCTGATTCTG+AGG 0.604430 6:+112933998 None:intergenic
TGATGATTTGGTCCCAACAA+AGG 0.608077 6:+112933974 None:intergenic
GTTTCAACCAGGCTGCATGA+AGG 0.615001 6:+112931806 None:intergenic
GGAATGCCACCTCCTTCAAG+TGG 0.615362 6:-112931403 MsG0680035830.01.T01:CDS
TGAAGGCCAGCTAACTCACC+AGG 0.618272 6:+112931823 None:intergenic
GCATAAATATTTCTTAACCC+AGG 0.620188 6:+112931661 None:intergenic
ACCAGGAACTCCCACCGACA+AGG 0.623658 6:+112931840 None:intergenic
GACTCCTATTATCATTACAA+AGG 0.623955 6:-112930654 MsG0680035830.01.T01:intron
TTATCGGGAGATATATCAGT+AGG 0.628198 6:+112930734 None:intergenic
AAGCTTAGAGATATTGGCCG+AGG 0.639552 6:-112931581 MsG0680035830.01.T01:CDS
AGACGCGGTTCTAAGACCAA+GGG 0.652255 6:-112930395 MsG0680035830.01.T01:intron
GCGAGTGTTCCACTTGAAGG+AGG 0.652330 6:+112931394 None:intergenic
TGTCCATATAGTAATCTGGA+GGG 0.652873 6:+112931031 None:intergenic
TGAAACATGGAAGATTGCCA+TGG 0.657492 6:-112931789 MsG0680035830.01.T01:CDS
CTGTCCATATAGTAATCTGG+AGG 0.661395 6:+112931030 None:intergenic
ATAGGAGTCATGGAGGACAA+TGG 0.668243 6:+112930668 None:intergenic
AGGGACAGAAAGATATAACG+AGG 0.678411 6:-112932836 MsG0680035830.01.T01:five_prime_UTR
GGGACAGAAAGATATAACGA+GGG 0.681422 6:-112932835 MsG0680035830.01.T01:five_prime_UTR
CTGTGAAGCAGCTAAAGGAG+CGG 0.689058 6:+112932567 None:intergenic
GTAAGTGACCCAAGAAAGGG+CGG 0.698577 6:-112930047 MsG0680035830.01.T01:CDS
TGCTATCCGAATGAACTTGG+GGG 0.699431 6:-112931151 MsG0680035830.01.T01:CDS
AGGAATGAAACCTTTAGACG+CGG 0.712354 6:-112930410 MsG0680035830.01.T01:CDS
AACTTGATTGATCGTGACGG+TGG 0.723315 6:-112930251 MsG0680035830.01.T01:CDS
AATGATAATAGGAGTCATGG+AGG 0.729975 6:+112930661 None:intergenic
TGTAGATGCCGATAGAAATG+CGG 0.739096 6:-112930855 MsG0680035830.01.T01:CDS
GAAAACTTGATTGATCGTGA+CGG 0.747389 6:-112930254 MsG0680035830.01.T01:CDS
GGATTTACGAAATTACAAGG+TGG 0.751484 6:-112931473 MsG0680035830.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAAATTCGTTATTTAAC+CGG - Chr6:112933771-112933790 MsG0680035830.01.T01:intron 15.0%
!!! AAAAAAATTGCAACTTTTAT+TGG - Chr6:112933966-112933985 MsG0680035830.01.T01:five_prime_UTR 15.0%
!! AAGAAACTATTTCAATACAA+AGG + Chr6:112933369-112933388 None:intergenic 20.0%
!! AATACCTTTGTAATGATAAT+AGG + Chr6:112933071-112933090 None:intergenic 20.0%
!! TTCTCAAAATTATTATGTGT+CGG - Chr6:112930309-112930328 MsG0680035830.01.T01:intron 20.0%
!! TTGAACATTAATAGGAAAAT+TGG - Chr6:112933605-112933624 MsG0680035830.01.T01:intron 20.0%
!! TTTCTTAATCATTTCATCTT+AGG - Chr6:112933288-112933307 MsG0680035830.01.T01:intron 20.0%
!!! ATTTTCCTATTAATGTTCAA+AGG + Chr6:112933605-112933624 None:intergenic 20.0%
!!! TTTAAAGATGATTGATTTTG+AGG - Chr6:112930024-112930043 MsG0680035830.01.T01:exon 20.0%
!!! TTTCAGAAATGAAGTTTTAA+TGG + Chr6:112931679-112931698 None:intergenic 20.0%
!!! TTTTTATAGTCTGTTTGTTT+TGG - Chr6:112930128-112930147 MsG0680035830.01.T01:CDS 20.0%
! AAAAGTTTCTCTGGTAAAAT+GGG - Chr6:112930192-112930211 MsG0680035830.01.T01:CDS 25.0%
! AAACAACAGAAAAGATCAAA+GGG + Chr6:112931539-112931558 None:intergenic 25.0%
! AAACACCTTTGAACATTAAT+AGG - Chr6:112933597-112933616 MsG0680035830.01.T01:intron 25.0%
! AAACTTTCTGTTGAATTTGT+TGG + Chr6:112929778-112929797 None:intergenic 25.0%
! AAGCATACAAATATAGGATA+AGG + Chr6:112932423-112932442 None:intergenic 25.0%
! ACAAACAGACTATAAAAATC+AGG + Chr6:112930126-112930145 None:intergenic 25.0%
! ACATACAAATTTAGAGAATG+GGG - Chr6:112930682-112930701 MsG0680035830.01.T01:CDS 25.0%
! ACTTTATTGAACCAAACAAA+AGG - Chr6:112933027-112933046 MsG0680035830.01.T01:intron 25.0%
! AGAAATATTTATGCACCTAA+TGG - Chr6:112932066-112932085 MsG0680035830.01.T01:intron 25.0%
! ATCACAATTAGATTGTAGTT+AGG + Chr6:112933405-112933424 None:intergenic 25.0%
! ATCATGAATATACACAAATG+AGG + Chr6:112929955-112929974 None:intergenic 25.0%
! ATGTGTAGTAATATAGAACT+TGG - Chr6:112932111-112932130 MsG0680035830.01.T01:intron 25.0%
! ATTACAAGATTATCTATCGT+TGG - Chr6:112933165-112933184 MsG0680035830.01.T01:intron 25.0%
! ATTGAGTTAAATTAGAGTGA+AGG - Chr6:112930098-112930117 MsG0680035830.01.T01:CDS 25.0%
! ATTGCATTTAGCATAAGATA+AGG + Chr6:112930806-112930825 None:intergenic 25.0%
! CAATACAAGCATACAAATAT+AGG + Chr6:112932429-112932448 None:intergenic 25.0%
! GACATACAAATTTAGAGAAT+GGG - Chr6:112930681-112930700 MsG0680035830.01.T01:CDS 25.0%
! GCTTGTATTGTATATTCTAA+TGG - Chr6:112932439-112932458 MsG0680035830.01.T01:intron 25.0%
! TAAACAACAGAAAAGATCAA+AGG + Chr6:112931540-112931559 None:intergenic 25.0%
! TGTGTAGTAATATAGAACTT+GGG - Chr6:112932112-112932131 MsG0680035830.01.T01:intron 25.0%
!! AAAAACACCACAACTATTTT+CGG + Chr6:112931410-112931429 None:intergenic 25.0%
!! AATAGTTTGTGCAAAAGATT+TGG + Chr6:112932638-112932657 None:intergenic 25.0%
!! ATTTTTGTAGATTTCTGCAA+AGG + Chr6:112931780-112931799 None:intergenic 25.0%
!! TGCACTAATATTTTCAAAGT+CGG + Chr6:112932596-112932615 None:intergenic 25.0%
!! TTTGGTTCAATAAAGTTTGT+TGG + Chr6:112933023-112933042 None:intergenic 25.0%
!!! AAAAGATTTGGAAAGCATTT+CGG + Chr6:112932626-112932645 None:intergenic 25.0%
!!! ACAAGTTTTTGGATATTGAA+AGG - Chr6:112930862-112930881 MsG0680035830.01.T01:CDS 25.0%
!!! ATTAATGTTCAAAGGTGTTT+TGG + Chr6:112933597-112933616 None:intergenic 25.0%
!!! CAAGTTTTTGGATATTGAAA+GGG - Chr6:112930863-112930882 MsG0680035830.01.T01:CDS 25.0%
!!! TCTTTTTTTCATCATTAGCT+AGG + Chr6:112932026-112932045 None:intergenic 25.0%
!!! TTAATGTTCAAAGGTGTTTT+GGG + Chr6:112933596-112933615 None:intergenic 25.0%
AAATATCATCGAGTACAGAA+GGG + Chr6:112932376-112932395 None:intergenic 30.0%
AATCACTTTCACAGTAATCA+TGG + Chr6:112929987-112930006 None:intergenic 30.0%
AATGGAACTTTGTTAAAAGG+AGG - Chr6:112932084-112932103 MsG0680035830.01.T01:intron 30.0%
ACAAACAAGAAAAGTTTCTC+TGG - Chr6:112930183-112930202 MsG0680035830.01.T01:CDS 30.0%
AGAATGTTAGTGCACAAATA+TGG - Chr6:112930604-112930623 MsG0680035830.01.T01:intron 30.0%
ATCGTATGTATTATCGATGT+CGG + Chr6:112930270-112930289 None:intergenic 30.0%
ATGAGTTTCAACCTCTTAAA+TGG + Chr6:112931203-112931222 None:intergenic 30.0%
ATGGAACTTTGTTAAAAGGA+GGG - Chr6:112932085-112932104 MsG0680035830.01.T01:intron 30.0%
CAGCTTCGAAAAAAATTATC+AGG + Chr6:112930719-112930738 None:intergenic 30.0%
CCTAATGGAACTTTGTTAAA+AGG - Chr6:112932081-112932100 MsG0680035830.01.T01:intron 30.0%
CTATCTTATGTAGCTATTAC+CGG - Chr6:112933427-112933446 MsG0680035830.01.T01:intron 30.0%
GAAAACCAACATGATGAATT+TGG - Chr6:112930066-112930085 MsG0680035830.01.T01:CDS 30.0%
GAAAAGTTTCTCTGGTAAAA+TGG - Chr6:112930191-112930210 MsG0680035830.01.T01:CDS 30.0%
GAATAGATTGTAACAATGAC+CGG + Chr6:112933806-112933825 None:intergenic 30.0%
GACTCCTATTATCATTACAA+AGG - Chr6:112933064-112933083 MsG0680035830.01.T01:intron 30.0%
GCATAAATATTTCTTAACCC+AGG + Chr6:112932060-112932079 None:intergenic 30.0%
GGACATACAAATTTAGAGAA+TGG - Chr6:112930680-112930699 MsG0680035830.01.T01:CDS 30.0%
TATTGTCGTCAATGATGAAA+TGG - Chr6:112932947-112932966 MsG0680035830.01.T01:five_prime_UTR 30.0%
TGTAATGATAATAGGAGTCA+TGG + Chr6:112933063-112933082 None:intergenic 30.0%
TTCTAATGGTTAGTATGAAC+AGG - Chr6:112932453-112932472 MsG0680035830.01.T01:intron 30.0%
TTGGAAGAAACATGATGATT+TGG + Chr6:112929759-112929778 None:intergenic 30.0%
! ACGATCAATCAAGTTTTCAT+AGG + Chr6:112933462-112933481 None:intergenic 30.0%
! ATGATTAGTTGGGTTTAATG+AGG - Chr6:112930384-112930403 MsG0680035830.01.T01:intron 30.0%
! CACTAATATTTTCAAAGTCG+GGG + Chr6:112932594-112932613 None:intergenic 30.0%
! CCTTTTAACAAAGTTCCATT+AGG + Chr6:112932084-112932103 None:intergenic 30.0%
! GCACTAATATTTTCAAAGTC+GGG + Chr6:112932595-112932614 None:intergenic 30.0%
! GGAGAGTTTCTTATTTCTTT+CGG + Chr6:112931298-112931317 None:intergenic 30.0%
! GTAATGGGATATACTATACA+TGG - Chr6:112932294-112932313 MsG0680035830.01.T01:intron 30.0%
! TAAGAGGAAACACAAGTTTT+TGG - Chr6:112930851-112930870 MsG0680035830.01.T01:CDS 30.0%
! TTTTCATAGGAAACTGTATC+CGG + Chr6:112933449-112933468 None:intergenic 30.0%
!! ATAATGGATTCTCCTTTGTT+GGG - Chr6:112929732-112929751 MsG0680035830.01.T01:three_prime_UTR 30.0%
!! TACACTTCATTTTGTTGCTT+TGG - Chr6:112933193-112933212 MsG0680035830.01.T01:intron 30.0%
!!! TGGTGTTTTTAGAAATGTAG+CGG - Chr6:112931420-112931439 MsG0680035830.01.T01:CDS 30.0%
!!! TTTTTTTCGAAGCTGAAAAG+CGG - Chr6:112930724-112930743 MsG0680035830.01.T01:CDS 30.0%
AAAAAGATAATGAGCGATCC+TGG - Chr6:112932039-112932058 MsG0680035830.01.T01:intron 35.0%
AAAAGATAATGAGCGATCCT+GGG - Chr6:112932040-112932059 MsG0680035830.01.T01:intron 35.0%
AAAAGATCAAAGGGAAGAGA+AGG + Chr6:112931530-112931549 None:intergenic 35.0%
AATAAGAAACTCTCCACTAG+TGG - Chr6:112931303-112931322 MsG0680035830.01.T01:intron 35.0%
AATGAGCTCATTGTCATTGA+AGG - Chr6:112930659-112930678 MsG0680035830.01.T01:CDS 35.0%
AATGAGGCCAAAATTTGTAG+AGG - Chr6:112930400-112930419 MsG0680035830.01.T01:CDS 35.0%
AATGATAATAGGAGTCATGG+AGG + Chr6:112933060-112933079 None:intergenic 35.0%
AATTTAGAGAATGGGGTTGA+AGG - Chr6:112930689-112930708 MsG0680035830.01.T01:CDS 35.0%
ACAAAAAGGAGAAGGAAACA+TGG + Chr6:112929804-112929823 None:intergenic 35.0%
ATACAAAGGAGTTAGAACCT+TGG + Chr6:112933355-112933374 None:intergenic 35.0%
ATGAGGCCAAAATTTGTAGA+GGG - Chr6:112930401-112930420 MsG0680035830.01.T01:CDS 35.0%
ATGTCGTGTTATCGAGTATT+TGG + Chr6:112932666-112932685 None:intergenic 35.0%
ATTCCCTCCAGATTACTATA+TGG - Chr6:112932684-112932703 MsG0680035830.01.T01:CDS 35.0%
ATTTAACCGGAACATTTGTC+CGG - Chr6:112933784-112933803 MsG0680035830.01.T01:intron 35.0%
CAAAAAGGAGAAGGAAACAT+GGG + Chr6:112929803-112929822 None:intergenic 35.0%
CAAGAGAAAAGAGAACTAAC+TGG + Chr6:112929838-112929857 None:intergenic 35.0%
CATAACTGTCCAAGATGTTT+AGG + Chr6:112932480-112932499 None:intergenic 35.0%
CATATCATAAGCTTGTGCTT+TGG + Chr6:112931124-112931143 None:intergenic 35.0%
CATGTTATTGAATCGGAACT+TGG - Chr6:112930925-112930944 MsG0680035830.01.T01:intron 35.0%
CATTGGTGAGAAGTTAGTAA+AGG - Chr6:112932188-112932207 MsG0680035830.01.T01:intron 35.0%
CTAAACATCTTGGACAGTTA+TGG - Chr6:112932478-112932497 MsG0680035830.01.T01:intron 35.0%
CTTTACTAACTTCTCACCAA+TGG + Chr6:112932190-112932209 None:intergenic 35.0%
GAAAACTTGATTGATCGTGA+CGG - Chr6:112933464-112933483 MsG0680035830.01.T01:intron 35.0%
GAAATATCATCGAGTACAGA+AGG + Chr6:112932377-112932396 None:intergenic 35.0%
GAATCCATTATCTGATTCTG+AGG + Chr6:112929723-112929742 None:intergenic 35.0%
GCAATGACTGTCAATGTAAT+GGG - Chr6:112932279-112932298 MsG0680035830.01.T01:intron 35.0%
GGAGGATTTACGAAATTACA+AGG - Chr6:112932242-112932261 MsG0680035830.01.T01:intron 35.0%
GGATTTACGAAATTACAAGG+TGG - Chr6:112932245-112932264 MsG0680035830.01.T01:intron 35.0%
TCAGGCACATGTTATTGAAT+CGG - Chr6:112930918-112930937 MsG0680035830.01.T01:intron 35.0%
TCGCAAACACTTAAGCAATA+AGG + Chr6:112930561-112930580 None:intergenic 35.0%
TCTTCCTCAGAATCAGATAA+TGG - Chr6:112929716-112929735 MsG0680035830.01.T01:three_prime_UTR 35.0%
TGCAATGACTGTCAATGTAA+TGG - Chr6:112932278-112932297 MsG0680035830.01.T01:intron 35.0%
TGGAACTTTGTTAAAAGGAG+GGG - Chr6:112932086-112932105 MsG0680035830.01.T01:intron 35.0%
TGGGAAAAGCTTAGAGATAT+TGG - Chr6:112932131-112932150 MsG0680035830.01.T01:intron 35.0%
TGTCCATATAGTAATCTGGA+GGG + Chr6:112932690-112932709 None:intergenic 35.0%
TTATCGGGAGATATATCAGT+AGG + Chr6:112932987-112933006 None:intergenic 35.0%
TTCAATAACATGTGCCTGAT+TGG + Chr6:112930917-112930936 None:intergenic 35.0%
TTGTTCCATGATCTCTAAGT+TGG + Chr6:112932830-112932849 None:intergenic 35.0%
TTTCTGCTACACCATTTAAG+AGG - Chr6:112931189-112931208 MsG0680035830.01.T01:CDS 35.0%
! AACGTGAATTTTGTACTGTC+CGG - Chr6:112931374-112931393 MsG0680035830.01.T01:intron 35.0%
! ACAACTGTAAACAGGCATTT+TGG - Chr6:112932897-112932916 MsG0680035830.01.T01:five_prime_UTR 35.0%
! ATAGGCTAGGATGATTAGTT+GGG - Chr6:112930374-112930393 MsG0680035830.01.T01:intron 35.0%
! CATGTTTCTACGTAACAACA+TGG + Chr6:112932399-112932418 None:intergenic 35.0%
! GCAATTCTTTTCCAGTTGTT+GGG - Chr6:112930821-112930840 MsG0680035830.01.T01:CDS 35.0%
! GGAAGGATGAATAAAGTGTT+TGG - Chr6:112933855-112933874 MsG0680035830.01.T01:intron 35.0%
! GTTTTATATGCATTGCATGC+AGG - Chr6:112932799-112932818 MsG0680035830.01.T01:five_prime_UTR 35.0%
! TCTTTTACCTGTGTATGTGT+CGG - Chr6:112930523-112930542 MsG0680035830.01.T01:intron 35.0%
! TGCAATTCTTTTCCAGTTGT+TGG - Chr6:112930820-112930839 MsG0680035830.01.T01:CDS 35.0%
! TTTGCTATCCGAATGAACTT+GGG - Chr6:112932565-112932584 MsG0680035830.01.T01:intron 35.0%
!! GATAATGGATTCTCCTTTGT+TGG - Chr6:112929731-112929750 MsG0680035830.01.T01:three_prime_UTR 35.0%
!! TCAATAAAGTTTGTTGGAGC+TGG + Chr6:112933017-112933036 None:intergenic 35.0%
!!! AGTTGGTGGTATTTTAACTG+TGG - Chr6:112932221-112932240 MsG0680035830.01.T01:intron 35.0%
!!! CTTCATTTTGTTGCTTTGGT+AGG - Chr6:112933197-112933216 MsG0680035830.01.T01:intron 35.0%
!!! GGTGTTTTTAGAAATGTAGC+GGG - Chr6:112931421-112931440 MsG0680035830.01.T01:CDS 35.0%
!!! TGCTTTTTCGAAGCTATTTC+TGG - Chr6:112933834-112933853 MsG0680035830.01.T01:intron 35.0%
!!! TTTTCGAAGCTATTTCTGGA+AGG - Chr6:112933838-112933857 MsG0680035830.01.T01:intron 35.0%
AAGTGTTTGCGACAGGAAAA+AGG - Chr6:112930569-112930588 MsG0680035830.01.T01:intron 40.0%
ACCTTATTCCAACCAGCTAT+AGG - Chr6:112931955-112931974 MsG0680035830.01.T01:intron 40.0%
AGAAATACTTGAGTCACTGC+TGG + Chr6:112933273-112933292 None:intergenic 40.0%
AGGAATGAAACCTTTAGACG+CGG - Chr6:112933308-112933327 MsG0680035830.01.T01:intron 40.0%
AGGGACAGAAAGATATAACG+AGG - Chr6:112930882-112930901 MsG0680035830.01.T01:CDS 40.0%
AGTGTTTGCGACAGGAAAAA+GGG - Chr6:112930570-112930589 MsG0680035830.01.T01:intron 40.0%
ATTGCTTAAGTGTTTGCGAC+AGG - Chr6:112930562-112930581 MsG0680035830.01.T01:intron 40.0%
CAATCTTCCATGTTTCAACC+AGG + Chr6:112931926-112931945 None:intergenic 40.0%
CACCTGTCCATATAGTAATC+TGG + Chr6:112932694-112932713 None:intergenic 40.0%
CACTGACAACAACTGTAAAC+AGG - Chr6:112932889-112932908 MsG0680035830.01.T01:five_prime_UTR 40.0%
CAGTGATACCGCATTTCTAT+CGG + Chr6:112932874-112932893 None:intergenic 40.0%
CATAGGCTAGGATGATTAGT+TGG - Chr6:112930373-112930392 MsG0680035830.01.T01:intron 40.0%
CCAACATGATGAATTTGGAG+AGG - Chr6:112930071-112930090 MsG0680035830.01.T01:CDS 40.0%
CCTCTCCAAATTCATCATGT+TGG + Chr6:112930074-112930093 None:intergenic 40.0%
CTCCAGATTACTATATGGAC+AGG - Chr6:112932689-112932708 MsG0680035830.01.T01:CDS 40.0%
CTGTCCATATAGTAATCTGG+AGG + Chr6:112932691-112932710 None:intergenic 40.0%
GATTACTATATGGACAGGTG+TGG - Chr6:112932694-112932713 MsG0680035830.01.T01:CDS 40.0%
GCTATAGGACTTGCGAAAAA+TGG - Chr6:112931970-112931989 MsG0680035830.01.T01:intron 40.0%
GCTTTCTACAATGGAACCAT+TGG - Chr6:112932171-112932190 MsG0680035830.01.T01:intron 40.0%
GGGACAGAAAGATATAACGA+GGG - Chr6:112930883-112930902 MsG0680035830.01.T01:CDS 40.0%
GTTCCATTGTAGAAAGCTTG+TGG + Chr6:112932168-112932187 None:intergenic 40.0%
TAAGAACTTAGCTTCGGGAT+CGG + Chr6:112931854-112931873 None:intergenic 40.0%
TAAGTTCTTAGGTGCCTTGT+CGG - Chr6:112931864-112931883 MsG0680035830.01.T01:CDS 40.0%
TACGCTTCCGAAAATAGTTG+TGG - Chr6:112931400-112931419 MsG0680035830.01.T01:CDS 40.0%
TCCTATAGCTGGTTGGAATA+AGG + Chr6:112931959-112931978 None:intergenic 40.0%
TCGAGCTTTCAGAAGAAAGT+AGG - Chr6:112933495-112933514 MsG0680035830.01.T01:intron 40.0%
TCTACCGACATTAAGACAGT+GGG + Chr6:112931461-112931480 None:intergenic 40.0%
TGAAACATGGAAGATTGCCA+TGG - Chr6:112931929-112931948 MsG0680035830.01.T01:intron 40.0%
TGAACAGGTCCTAAACATCT+TGG - Chr6:112932468-112932487 MsG0680035830.01.T01:intron 40.0%
TGACAGCAACAAAAAGGAGA+AGG + Chr6:112929812-112929831 None:intergenic 40.0%
TGAGGCCAAAATTTGTAGAG+GGG - Chr6:112930402-112930421 MsG0680035830.01.T01:CDS 40.0%
TGGTTGTGACAGCAACAAAA+AGG + Chr6:112929818-112929837 None:intergenic 40.0%
TGTAGATGCCGATAGAAATG+CGG - Chr6:112932863-112932882 MsG0680035830.01.T01:five_prime_UTR 40.0%
TTATATGCATTGCATGCAGG+TGG - Chr6:112932802-112932821 MsG0680035830.01.T01:five_prime_UTR 40.0%
TTGCTATCCGAATGAACTTG+GGG - Chr6:112932566-112932585 MsG0680035830.01.T01:intron 40.0%
! AGGCTTTTCCTGAAAGAAAG+AGG - Chr6:112933515-112933534 MsG0680035830.01.T01:intron 40.0%
! CAGTTGGTGTTTCAATGCTT+AGG - Chr6:112930980-112930999 MsG0680035830.01.T01:intron 40.0%
! GATGAGGGGGTAAATTTTGA+GGG - Chr6:112930426-112930445 MsG0680035830.01.T01:CDS 40.0%
! TTTCTCTGGTAAAATGGGCT+AGG - Chr6:112930197-112930216 MsG0680035830.01.T01:CDS 40.0%
! TTTTTCGCAAGTCCTATAGC+TGG + Chr6:112931970-112931989 None:intergenic 40.0%
!! ATAAAGTTTGTTGGAGCTGG+AGG + Chr6:112933014-112933033 None:intergenic 40.0%
!! GTTGATGACCTCTTTCTTTC+AGG + Chr6:112933526-112933545 None:intergenic 40.0%
!! GTTGTTTTCCAAGCTTCAAG+TGG - Chr6:112931054-112931073 MsG0680035830.01.T01:CDS 40.0%
!! GTTTGCTATCCGAATGAACT+TGG - Chr6:112932564-112932583 MsG0680035830.01.T01:intron 40.0%
!! GTTTTTAGAAATGTAGCGGG+TGG - Chr6:112931424-112931443 MsG0680035830.01.T01:CDS 40.0%
!! TATTTTCGGAAGCGTACTTC+CGG + Chr6:112931396-112931415 None:intergenic 40.0%
!! TGATGATTTGGTCCCAACAA+AGG + Chr6:112929747-112929766 None:intergenic 40.0%
!! TGTAAACAGGCATTTTGGAG+CGG - Chr6:112932902-112932921 MsG0680035830.01.T01:five_prime_UTR 40.0%
!!! TGGTGGTATTTTAACTGTGG+AGG - Chr6:112932224-112932243 MsG0680035830.01.T01:intron 40.0%
AAATTTCCCTTTGCCGCATC+CGG + Chr6:112932508-112932527 None:intergenic 45.0%
AAATTTGTAGAGGGGGGATG+AGG - Chr6:112930410-112930429 MsG0680035830.01.T01:CDS 45.0%
AACTTGATTGATCGTGACGG+TGG - Chr6:112933467-112933486 MsG0680035830.01.T01:intron 45.0%
AAGACCAAGGGTCTATACCA+AGG - Chr6:112933335-112933354 MsG0680035830.01.T01:intron 45.0%
AAGCTTAGAGATATTGGCCG+AGG - Chr6:112932137-112932156 MsG0680035830.01.T01:intron 45.0%
AATTTGTAGAGGGGGGATGA+GGG - Chr6:112930411-112930430 MsG0680035830.01.T01:CDS 45.0%
ACAGGTGTGGTATACTCTGT+TGG - Chr6:112932707-112932726 MsG0680035830.01.T01:CDS 45.0%
AGAACCTTGGTATAGACCCT+TGG + Chr6:112933342-112933361 None:intergenic 45.0%
AGCAGTAAGTGACCCAAGAA+AGG - Chr6:112933667-112933686 MsG0680035830.01.T01:intron 45.0%
AGGCCAAAATTTGTAGAGGG+GGG - Chr6:112930404-112930423 MsG0680035830.01.T01:CDS 45.0%
AGTGCACAAATATGGTGTGC+AGG - Chr6:112930612-112930631 MsG0680035830.01.T01:intron 45.0%
ATAGGAGTCATGGAGGACAA+TGG + Chr6:112933053-112933072 None:intergenic 45.0%
CAAACCTGTGAAGCAGCTAA+AGG + Chr6:112931159-112931178 None:intergenic 45.0%
CAATGACCGGACAAATGTTC+CGG + Chr6:112933793-112933812 None:intergenic 45.0%
CACAAATATGGTGTGCAGGA+TGG - Chr6:112930616-112930635 MsG0680035830.01.T01:intron 45.0%
CATCAACTGTGTGCATGTCA+AGG - Chr6:112933539-112933558 MsG0680035830.01.T01:intron 45.0%
CCAAGTAAGTTGCAAAGCGT+GGG + Chr6:112931714-112931733 None:intergenic 45.0%
CGGCATCTACAACACATGTA+TGG + Chr6:112932854-112932873 None:intergenic 45.0%
CTACCGACATTAAGACAGTG+GGG + Chr6:112931460-112931479 None:intergenic 45.0%
CTCACCCTCCAATATCACTT+CGG - Chr6:112931333-112931352 MsG0680035830.01.T01:intron 45.0%
GAAACACCGACACTTGAGAT+TGG - Chr6:112930456-112930475 MsG0680035830.01.T01:CDS 45.0%
GAGGCCAAAATTTGTAGAGG+GGG - Chr6:112930403-112930422 MsG0680035830.01.T01:CDS 45.0%
GATCCCGAAGCTAAGTTCTT+AGG - Chr6:112931853-112931872 MsG0680035830.01.T01:CDS 45.0%
GATGCGGCAAAGGGAAATTT+AGG - Chr6:112932508-112932527 MsG0680035830.01.T01:intron 45.0%
GCACCTAAGAACTTAGCTTC+GGG + Chr6:112931859-112931878 None:intergenic 45.0%
GCAGTAAGTGACCCAAGAAA+GGG - Chr6:112933668-112933687 MsG0680035830.01.T01:intron 45.0%
GCATCCGAAGTGATATTGGA+GGG + Chr6:112931340-112931359 None:intergenic 45.0%
GCTAGGTATTCTTCGAGTGT+AGG + Chr6:112932009-112932028 None:intergenic 45.0%
GCTTTGGTAGGATGACCAAT+TGG - Chr6:112933209-112933228 MsG0680035830.01.T01:intron 45.0%
GGCACCTAAGAACTTAGCTT+CGG + Chr6:112931860-112931879 None:intergenic 45.0%
GGGAGATATATCAGTAGGTG+TGG + Chr6:112932982-112933001 None:intergenic 45.0%
GGGATTCGTTCTACTTCAAC+TGG - Chr6:112932924-112932943 MsG0680035830.01.T01:five_prime_UTR 45.0%
GGTGTTTCAATGCTTAGGCT+TGG - Chr6:112930985-112931004 MsG0680035830.01.T01:intron 45.0%
GGTTGGAATAAGGTCTTCCA+TGG + Chr6:112931949-112931968 None:intergenic 45.0%
GTAAAGGATGTCGCAGAAGT+TGG - Chr6:112932204-112932223 MsG0680035830.01.T01:intron 45.0%
GTCTACCGACATTAAGACAG+TGG + Chr6:112931462-112931481 None:intergenic 45.0%
GTGTGCATCCGAAGTGATAT+TGG + Chr6:112931344-112931363 None:intergenic 45.0%
GTGTTTGCGACAGGAAAAAG+GGG - Chr6:112930571-112930590 MsG0680035830.01.T01:intron 45.0%
GTTTCAATGCTTAGGCTTGG+TGG - Chr6:112930988-112931007 MsG0680035830.01.T01:intron 45.0%
TACCGACATTAAGACAGTGG+GGG + Chr6:112931459-112931478 None:intergenic 45.0%
TAGAGATATTGGCCGAGGAA+GGG - Chr6:112932142-112932161 MsG0680035830.01.T01:intron 45.0%
TCACTTCGGATGCACACATT+TGG - Chr6:112931347-112931366 MsG0680035830.01.T01:intron 45.0%
TCATCCTAGCCTATGAAGCA+CGG + Chr6:112930368-112930387 None:intergenic 45.0%
TCCAAGTAAGTTGCAAAGCG+TGG + Chr6:112931715-112931734 None:intergenic 45.0%
TGAAACACCGACACATACAC+AGG + Chr6:112930533-112930552 None:intergenic 45.0%
TGCATCCGAAGTGATATTGG+AGG + Chr6:112931341-112931360 None:intergenic 45.0%
TGCTATCCGAATGAACTTGG+GGG - Chr6:112932567-112932586 MsG0680035830.01.T01:CDS 45.0%
TGGAGCCAACTTAGAGATCA+TGG - Chr6:112932822-112932841 MsG0680035830.01.T01:five_prime_UTR 45.0%
TGGAGCTGGAGGTAGTTTAT+CGG + Chr6:112933003-112933022 None:intergenic 45.0%
TGGTAGGATGACCAATTGGT+CGG - Chr6:112933213-112933232 MsG0680035830.01.T01:intron 45.0%
TTAGAGATATTGGCCGAGGA+AGG - Chr6:112932141-112932160 MsG0680035830.01.T01:intron 45.0%
TTCCAAGCTTCAAGTGGCAT+TGG - Chr6:112931060-112931079 MsG0680035830.01.T01:CDS 45.0%
TTCCCCCACTGTCTTAATGT+CGG - Chr6:112931454-112931473 MsG0680035830.01.T01:CDS 45.0%
TTGTTGCAGCAGATGATGCT+CGG - Chr6:112930950-112930969 MsG0680035830.01.T01:intron 45.0%
! CATCCCCCCTCTACAAATTT+TGG + Chr6:112930410-112930429 None:intergenic 45.0%
! CATTGGAGGCGGTTCTTTTA+TGG - Chr6:112931077-112931096 MsG0680035830.01.T01:CDS 45.0%
! GAGGACAATGGCCTTTTGTT+TGG + Chr6:112933041-112933060 None:intergenic 45.0%
! GGATGAGGGGGTAAATTTTG+AGG - Chr6:112930425-112930444 MsG0680035830.01.T01:CDS 45.0%
! TCTTTTCCAGTTGTTGGGCT+AGG - Chr6:112930826-112930845 MsG0680035830.01.T01:CDS 45.0%
!!! GTAAACAGGCATTTTGGAGC+GGG - Chr6:112932903-112932922 MsG0680035830.01.T01:five_prime_UTR 45.0%
!!! TAAACAGGCATTTTGGAGCG+GGG - Chr6:112932904-112932923 MsG0680035830.01.T01:five_prime_UTR 45.0%
AAGGATGTCGCAGAAGTTGG+TGG - Chr6:112932207-112932226 MsG0680035830.01.T01:intron 50.0%
ACACCGACACTTGAGATTGG+AGG - Chr6:112930459-112930478 MsG0680035830.01.T01:CDS 50.0%
ACATGCTGTTGATGCTGCAG+TGG - Chr6:112931011-112931030 MsG0680035830.01.T01:intron 50.0%
ACGGACACAGACACAAACAC+TGG + Chr6:112930349-112930368 None:intergenic 50.0%
AGAGCGAGTGTTCCACTTGA+AGG + Chr6:112932330-112932349 None:intergenic 50.0%
AGTGTTCCACTTGAAGGAGG+TGG + Chr6:112932324-112932343 None:intergenic 50.0%
ATTTGTAGAGGGGGGATGAG+GGG - Chr6:112930412-112930431 MsG0680035830.01.T01:CDS 50.0%
CATGCAGCCTGGTTGAAACA+TGG - Chr6:112931916-112931935 MsG0680035830.01.T01:intron 50.0%
CCCACGCTTTGCAACTTACT+TGG - Chr6:112931711-112931730 MsG0680035830.01.T01:CDS 50.0%
CGAAGTGATATTGGAGGGTG+AGG + Chr6:112931335-112931354 None:intergenic 50.0%
CGACAGGAAAAAGGGGTTTG+TGG - Chr6:112930578-112930597 MsG0680035830.01.T01:intron 50.0%
CGAGGGAAAAACAGCCAATC+AGG - Chr6:112930900-112930919 MsG0680035830.01.T01:CDS 50.0%
CTGTGAAGCAGCTAAAGGAG+CGG + Chr6:112931154-112931173 None:intergenic 50.0%
CTTACTCCTAGCCCAACAAC+TGG + Chr6:112930835-112930854 None:intergenic 50.0%
CTTGGACAGTTATGGACGTC+CGG - Chr6:112932486-112932505 MsG0680035830.01.T01:intron 50.0%
GACCAATTGGTCGGGGTAAT+TGG - Chr6:112933222-112933241 MsG0680035830.01.T01:intron 50.0%
GCACCTCCAATCTCAAGTGT+CGG + Chr6:112930465-112930484 None:intergenic 50.0%
GGAGCTGGAGGTAGTTTATC+GGG + Chr6:112933002-112933021 None:intergenic 50.0%
GGGCCACAAGCTTTCTACAA+TGG - Chr6:112932162-112932181 MsG0680035830.01.T01:intron 50.0%
GGGCTAGGATCTATGAAGCA+CGG - Chr6:112930212-112930231 MsG0680035830.01.T01:CDS 50.0%
GGTAGGATGACCAATTGGTC+GGG - Chr6:112933214-112933233 MsG0680035830.01.T01:intron 50.0%
GGTCTTAGAACCGCGTCTAA+AGG + Chr6:112933321-112933340 None:intergenic 50.0%
GGTGAGGAAAGTTCCACTAG+TGG + Chr6:112931319-112931338 None:intergenic 50.0%
GTAAGTGACCCAAGAAAGGG+CGG - Chr6:112933671-112933690 MsG0680035830.01.T01:intron 50.0%
GTAGGATGACCAATTGGTCG+GGG - Chr6:112933215-112933234 MsG0680035830.01.T01:intron 50.0%
GTTTCAACCAGGCTGCATGA+AGG + Chr6:112931915-112931934 None:intergenic 50.0%
TCGCAAGTCCTATAGCTGGT+TGG + Chr6:112931966-112931985 None:intergenic 50.0%
TGGAACACTCGCTCTTTCTC+TGG - Chr6:112932335-112932354 MsG0680035830.01.T01:intron 50.0%
TGTCTGTGTCCGTGCTTCAT+AGG - Chr6:112930356-112930375 MsG0680035830.01.T01:intron 50.0%
TTCTTAGGTGCCTTGTCGGT+GGG - Chr6:112931868-112931887 MsG0680035830.01.T01:CDS 50.0%
! CAAGCTTCAAGTGGCATTGG+AGG - Chr6:112931063-112931082 MsG0680035830.01.T01:CDS 50.0%
! CTCCAATGCCACTTGAAGCT+TGG + Chr6:112931065-112931084 None:intergenic 50.0%
! GTTGTTGGGCTAGGAGTAAG+AGG - Chr6:112930835-112930854 MsG0680035830.01.T01:CDS 50.0%
!! AGACGCGGTTCTAAGACCAA+GGG - Chr6:112933323-112933342 MsG0680035830.01.T01:intron 50.0%
!! GATTGGAGGTGCTTTGCTTC+TGG - Chr6:112930473-112930492 MsG0680035830.01.T01:CDS 50.0%
!! TAGACGCGGTTCTAAGACCA+AGG - Chr6:112933322-112933341 MsG0680035830.01.T01:intron 50.0%
ATGGAAGAGTGGACAGGGGT+TGG - Chr6:112930635-112930654 MsG0680035830.01.T01:intron 55.0%
CAGGATGGAAGAGTGGACAG+GGG - Chr6:112930631-112930650 MsG0680035830.01.T01:intron 55.0%
CAGTTATGGACGTCCGGATG+CGG - Chr6:112932492-112932511 MsG0680035830.01.T01:intron 55.0%
CGCCAATTACCCCGACCAAT+TGG + Chr6:112933227-112933246 None:intergenic 55.0%
CGCTCCTTTAGCTGCTTCAC+AGG - Chr6:112931152-112931171 MsG0680035830.01.T01:CDS 55.0%
CTGGACAACCGCCCTTTCTT+GGG + Chr6:112933682-112933701 None:intergenic 55.0%
GAAAGCTTGTGGCCCTTCCT+CGG + Chr6:112932157-112932176 None:intergenic 55.0%
GACGAGACACGCCTGATCTA+AGG + Chr6:112930243-112930262 None:intergenic 55.0%
GCACGGACACTCCTTAGATC+AGG - Chr6:112930229-112930248 MsG0680035830.01.T01:CDS 55.0%
GCAGGATGGAAGAGTGGACA+GGG - Chr6:112930630-112930649 MsG0680035830.01.T01:intron 55.0%
GCGAGTGTTCCACTTGAAGG+AGG + Chr6:112932327-112932346 None:intergenic 55.0%
GGAATGCCACCTCCTTCAAG+TGG - Chr6:112932315-112932334 MsG0680035830.01.T01:intron 55.0%
GGAGTTCCTGGTGAGTTAGC+TGG - Chr6:112931889-112931908 MsG0680035830.01.T01:intron 55.0%
GTGTCCGTGCTTCATAGGCT+AGG - Chr6:112930361-112930380 MsG0680035830.01.T01:intron 55.0%
GTTCTTAGGTGCCTTGTCGG+TGG - Chr6:112931867-112931886 MsG0680035830.01.T01:CDS 55.0%
TGAAGGCCAGCTAACTCACC+AGG + Chr6:112931898-112931917 None:intergenic 55.0%
TGCAGGATGGAAGAGTGGAC+AGG - Chr6:112930629-112930648 MsG0680035830.01.T01:intron 55.0%
TGGAAGAGTGGACAGGGGTT+GGG - Chr6:112930636-112930655 MsG0680035830.01.T01:intron 55.0%
TGGTGTGCAGGATGGAAGAG+TGG - Chr6:112930624-112930643 MsG0680035830.01.T01:intron 55.0%
TTTGTAGAGGGGGGATGAGG+GGG - Chr6:112930413-112930432 MsG0680035830.01.T01:CDS 55.0%
! GCTTCAAGTGGCATTGGAGG+CGG - Chr6:112931066-112931085 MsG0680035830.01.T01:CDS 55.0%
!! GATGCTCGGTGTTCTGCAGT+TGG - Chr6:112930964-112930983 MsG0680035830.01.T01:intron 55.0%
!! TGGAGGTGCTTTGCTTCTGG+TGG - Chr6:112930476-112930495 MsG0680035830.01.T01:CDS 55.0%
ACCAGGAACTCCCACCGACA+AGG + Chr6:112931881-112931900 None:intergenic 60.0%
CGGGGTCCCCCAAGTTCATT+CGG + Chr6:112932576-112932595 None:intergenic 60.0%
GCTGGACAACCGCCCTTTCT+TGG + Chr6:112933683-112933702 None:intergenic 60.0%
GTCGGGGTAATTGGCGCAAG+CGG - Chr6:112933231-112933250 MsG0680035830.01.T01:intron 60.0%
GTGGCTGCTGCATTATGCGC+TGG - Chr6:112931030-112931049 MsG0680035830.01.T01:CDS 60.0%
!! TAGCTGGCCTTCATGCAGCC+TGG - Chr6:112931905-112931924 MsG0680035830.01.T01:intron 60.0%
GCCTTGTCGGTGGGAGTTCC+TGG - Chr6:112931877-112931896 MsG0680035830.01.T01:CDS 65.0%
GGACGTCCGGATGCGGCAAA+GGG - Chr6:112932499-112932518 MsG0680035830.01.T01:intron 65.0%
GGGGTAATTGGCGCAAGCGG+TGG - Chr6:112933234-112933253 MsG0680035830.01.T01:intron 65.0%
TGGACGTCCGGATGCGGCAA+AGG - Chr6:112932498-112932517 MsG0680035830.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr6 gene 112929714 112934026 112929714 ID=MsG0680035830.01;Name=MsG0680035830.01
Chr6 mRNA 112929714 112934026 112929714 ID=MsG0680035830.01.T01;Parent=MsG0680035830.01;Name=MsG0680035830.01.T01;_AED=0.24;_eAED=0.31;_QI=369|0.66|0.57|1|0.83|0.71|7|314|532
Chr6 exon 112929714 112930300 112929714 ID=MsG0680035830.01.T01:exon:9792;Parent=MsG0680035830.01.T01
Chr6 exon 112930396 112930521 112930396 ID=MsG0680035830.01.T01:exon:9791;Parent=MsG0680035830.01.T01
Chr6 exon 112930655 112930919 112930655 ID=MsG0680035830.01.T01:exon:9790;Parent=MsG0680035830.01.T01
Chr6 exon 112931030 112931265 112931030 ID=MsG0680035830.01.T01:exon:9789;Parent=MsG0680035830.01.T01
Chr6 exon 112931384 112931902 112931384 ID=MsG0680035830.01.T01:exon:9788;Parent=MsG0680035830.01.T01
Chr6 exon 112932567 112932987 112932567 ID=MsG0680035830.01.T01:exon:9787;Parent=MsG0680035830.01.T01
Chr6 exon 112933899 112934026 112933899 ID=MsG0680035830.01.T01:exon:9786;Parent=MsG0680035830.01.T01
Chr6 five_prime_UTR 112933899 112934026 112933899 ID=MsG0680035830.01.T01:five_prime_utr;Parent=MsG0680035830.01.T01
Chr6 five_prime_UTR 112932747 112932987 112932747 ID=MsG0680035830.01.T01:five_prime_utr;Parent=MsG0680035830.01.T01
Chr6 CDS 112932567 112932746 112932567 ID=MsG0680035830.01.T01:cds;Parent=MsG0680035830.01.T01
Chr6 CDS 112931384 112931902 112931384 ID=MsG0680035830.01.T01:cds;Parent=MsG0680035830.01.T01
Chr6 CDS 112931030 112931265 112931030 ID=MsG0680035830.01.T01:cds;Parent=MsG0680035830.01.T01
Chr6 CDS 112930655 112930919 112930655 ID=MsG0680035830.01.T01:cds;Parent=MsG0680035830.01.T01
Chr6 CDS 112930396 112930521 112930396 ID=MsG0680035830.01.T01:cds;Parent=MsG0680035830.01.T01
Chr6 CDS 112930028 112930300 112930028 ID=MsG0680035830.01.T01:cds;Parent=MsG0680035830.01.T01
Chr6 three_prime_UTR 112929714 112930027 112929714 ID=MsG0680035830.01.T01:three_prime_utr;Parent=MsG0680035830.01.T01
Gene Sequence

>MsG0680035830.01.T01

ATGCTTAGGCTTGGTGGACATGCTGTTGATGCTGCAGTGGCTGCTGCATTATGCGCTGGTGTTGTTTTCCAAGCTTCAAGTGGCATTGGAGGCGGTTCTTTTATGGTTGTGAAATCTTCTTCTAGCTCCAAAGCACAAGCTTATGATATGAGAGAAACCGCTCCTTTAGCTGCTTCACAGAATATGTATCAAACCGATCCCGAAGCTAAGTTCTTAGGTGCCTTGTCGGTGGGAGTTCCTGGTGAGTTAGCTGGCCTTCATGCAGCCTGGTTGAAACATGGAAGATTGCCATGGAAGACCTTATTCCAACCAGCTATAGGACTTGCGAAAAATGGTTTCACAGTGTCTCCTACACTCGAAGAATACCTAGCTAATGATGAAAAAAAGATAATGAGCGATCCTGGGTTAAGAAATATTTATGCACCTAATGGAACTTTGTTAAAAGGAGGGGAGATGTGTAGTAATATAGAACTTGGGAAAAGCTTAGAGATATTGGCCGAGGAAGGGCCACAAGCTTTCTACAATGGAACCATTGGTGAGAAGTTAGTAAAGGATGTCGCAGAAGTTGGTGGTATTTTAACTGTGGAGGATTTACGAAATTACAAGGTGGAAATTACTGATGCAATGACTGTCAATGTAATGGGATATACTATACATGGAATGCCACCTCCTTCAAGTGGAACACTCGCTCTTTCTCTGGTCCTAAACATCTTGGACAGTTATGGACGTCCGGATGCGGCAAAGGGAAATTTAGGTATTCATAGACTAATAGAAGCTTTGAAACACACGTTTGCTATCCGAATGAACTTGGGGGACCCCGACTTTGAAAATATTAGTGCAACTTCATCCGAAATGCTTTCCAAATCTTTTGCACAAACTATTCAGCGCCAAATACTCGATAACACGACATTCCCTCCAGATTACTATATGGACAGGTGGAGCCAACTTAGAGATCATGGAACAAGCCATACATGTGTTGTAGATGCCGATAGAAATGCGGTATCACTGACAACAACTGTAAACAGGCATTTTGGAGCGGGGATTCGTTCTACTTCAACTGGTATTGTCGTCAATGATGAAATGGATGACTTCTCCACACCTACTGATATATCTCCCGATAAACTACCTCCAGCTCCAACAAACTTTATTGAACCAAACAAAAGGCCATTGTCCTCCATGACTCCTATTATCATTACAAAGGATGACCAATTGGTCGGGGTAATTGGCGCAAGCGGTGGAATGAGTATTATTCCAGCAGTGACTCAAGTATTTCTTAATCATTTCATCTTAGGAATGAAACCTTTAGACGCGGTTCTAAGACCAAGGCTATTACCGGATACAGTTTCCTATGAAAACTTGATTGATCGTGACGGTGGTCACATCGAGCTTTCAGAAGAAAGTAGGCTTTTCCTGAAAGAAAGAGGTCATCAACTGTGTGCATGTCAAGGACAATCTATTACTCAACTTATTGTTCATACTCCCAAAACACCTTTGAACATTAATAGGAAAATTGGTGAAAACATCGATTCGCATGTAAAGCGCAGCACTCTAACAGCAGTAAGTGACCCAAGAAAGGGCGGTTGTCCAGCTGCAGTATAA
Protein sequence

>MsG0680035830.01.T01

MLRLGGHAVDAAVAAALCAGVVFQASSGIGGGSFMVVKSSSSSKAQAYDMRETAPLAASQNMYQTDPEAKFLGALSVGVPGELAGLHAAWLKHGRLPWKTLFQPAIGLAKNGFTVSPTLEEYLANDEKKIMSDPGLRNIYAPNGTLLKGGEMCSNIELGKSLEILAEEGPQAFYNGTIGEKLVKDVAEVGGILTVEDLRNYKVEITDAMTVNVMGYTIHGMPPPSSGTLALSLVLNILDSYGRPDAAKGNLGIHRLIEALKHTFAIRMNLGDPDFENISATSSEMLSKSFAQTIQRQILDNTTFPPDYYMDRWSQLRDHGTSHTCVVDADRNAVSLTTTVNRHFGAGIRSTSTGIVVNDEMDDFSTPTDISPDKLPPAPTNFIEPNKRPLSSMTPIIITKDDQLVGVIGASGGMSIIPAVTQVFLNHFILGMKPLDAVLRPRLLPDTVSYENLIDRDGGHIELSEESRLFLKERGHQLCACQGQSITQLIVHTPKTPLNINRKIGENIDSHVKRSTLTAVSDPRKGGCPAAV*