AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180004743.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004743.01.T01 MTR_1g085640 97.680 388 7 2 1 386 1 388 0.0 784
MsG0180004743.01.T01 MTR_7g110830 63.683 391 85 16 1 367 1 358 1.65e-150 430
MsG0180004743.01.T01 MTR_1g085040 48.010 402 155 13 1 384 1 366 1.10e-96 293
MsG0180004743.01.T01 MTR_4g105130 84.091 132 21 0 1 132 1 132 4.44e-82 255
MsG0180004743.01.T01 MTR_7g111290 84.173 139 22 0 1 139 1 139 7.87e-77 242
MsG0180004743.01.T01 MTR_3g077110 71.523 151 40 1 1 151 1 148 3.68e-74 234
MsG0180004743.01.T01 MTR_1g112760 69.333 150 42 1 3 152 4 149 8.91e-73 227
MsG0180004743.01.T01 MTR_8g017440 74.797 123 31 0 1 123 1 123 3.05e-67 216
MsG0180004743.01.T01 MTR_2g099740 69.173 133 41 0 1 133 1 133 5.60e-66 215
MsG0180004743.01.T01 MTR_8g017540 55.789 190 65 4 1 177 47 230 7.13e-66 214
MsG0180004743.01.T01 MTR_8g017500 73.171 123 33 0 1 123 1 123 2.62e-65 211
MsG0180004743.01.T01 MTR_2g064160 69.231 130 39 1 1 130 1 129 1.58e-64 208
MsG0180004743.01.T01 MTR_3g074520 64.394 132 47 0 1 132 1 132 2.69e-61 201
MsG0180004743.01.T01 MTR_6g012690 63.121 141 52 0 1 141 1 141 4.35e-61 201
MsG0180004743.01.T01 MTR_4g478180 67.188 128 42 0 1 128 2 129 5.26e-61 201
MsG0180004743.01.T01 MTR_7g011170 62.838 148 52 1 1 145 1 148 8.74e-61 199
MsG0180004743.01.T01 MTR_8g098860 69.492 118 36 0 1 118 1 118 9.05e-61 199
MsG0180004743.01.T01 MTR_4g082230 67.188 128 42 0 1 128 1 128 1.29e-60 201
MsG0180004743.01.T01 MTR_8g095390 66.667 129 43 0 1 129 1 129 2.03e-60 198
MsG0180004743.01.T01 MTR_4g082290 67.969 128 41 0 1 128 1 128 3.02e-60 200
MsG0180004743.01.T01 MTR_4g073420 62.879 132 49 0 1 132 1 132 4.05e-60 196
MsG0180004743.01.T01 MTR_8g017340 70.968 124 35 1 1 123 1 124 5.32e-60 202
MsG0180004743.01.T01 MTR_8g017390 75.214 117 28 1 1 116 1 117 6.26e-60 201
MsG0180004743.01.T01 MTR_5g010020 73.636 110 29 0 1 110 1 110 1.95e-59 196
MsG0180004743.01.T01 MTR_7g076740 64.662 133 46 1 1 132 1 133 3.61e-59 194
MsG0180004743.01.T01 MTR_8g017350 70.161 124 36 1 1 123 1 124 1.14e-58 201
MsG0180004743.01.T01 MTR_3g097450 61.832 131 50 0 1 131 1 131 3.93e-58 191
MsG0180004743.01.T01 MTR_5g029840 62.595 131 49 0 1 131 1 131 5.62e-58 192
MsG0180004743.01.T01 MTR_5g007370 68.333 120 38 0 12 131 12 131 9.47e-58 191
MsG0180004743.01.T01 MTR_2g011660 65.116 129 44 1 1 128 1 129 1.26e-57 191
MsG0180004743.01.T01 MTR_5g078140 64.615 130 46 0 1 130 1 130 1.33e-57 191
MsG0180004743.01.T01 MTR_6g009430 60.606 132 52 0 1 132 1 132 3.79e-57 190
MsG0180004743.01.T01 MTR_3g065440 65.385 130 45 0 1 130 1 130 3.82e-57 189
MsG0180004743.01.T01 MTR_1g100653 67.797 118 38 0 1 118 1 118 4.88e-57 188
MsG0180004743.01.T01 MTR_8g031360 66.667 132 42 2 1 130 1 132 5.44e-57 188
MsG0180004743.01.T01 MTR_4g091490 64.341 129 45 1 1 128 1 129 6.30e-57 190
MsG0180004743.01.T01 MTR_3g028740 76.147 109 26 0 9 117 19 127 7.95e-57 189
MsG0180004743.01.T01 MTR_5g079670 62.400 125 47 0 3 127 2 126 9.31e-57 185
MsG0180004743.01.T01 MTR_2g089620 65.625 128 44 0 1 128 1 128 1.28e-56 188
MsG0180004743.01.T01 MTR_3g461490 64.394 132 47 0 1 132 1 132 1.48e-56 188
MsG0180004743.01.T01 MTR_4g102380 62.595 131 49 0 1 131 1 131 1.57e-56 186
MsG0180004743.01.T01 MTR_4g065017 72.321 112 31 0 11 122 16 127 7.78e-56 186
MsG0180004743.01.T01 MTR_2g097910 74.528 106 27 0 12 117 20 125 1.75e-55 185
MsG0180004743.01.T01 MTR_7g115650 64.407 118 42 0 1 118 1 118 5.19e-54 177
MsG0180004743.01.T01 MTR_7g096930 51.724 174 63 2 1 174 1 153 1.03e-53 179
MsG0180004743.01.T01 MTR_4g485530 61.905 126 48 0 1 126 1 126 3.63e-53 175
MsG0180004743.01.T01 MTR_1g100667 69.748 119 35 1 9 127 10 127 1.75e-52 176
MsG0180004743.01.T01 MTR_1g076150 66.102 118 40 0 1 118 1 118 7.49e-52 174
MsG0180004743.01.T01 MTR_3g083540 62.097 124 47 0 6 129 35 158 1.83e-51 174
MsG0180004743.01.T01 MTR_1g043050 65.517 116 40 0 1 116 1 116 3.56e-51 172
MsG0180004743.01.T01 MTR_6g055910 68.644 118 36 1 9 125 11 128 4.79e-51 172
MsG0180004743.01.T01 MTR_5g042030 56.250 144 63 0 12 155 7 150 8.83e-51 172
MsG0180004743.01.T01 MTR_1g043080 64.655 116 41 0 1 116 1 116 1.33e-50 171
MsG0180004743.01.T01 MTR_0251s0050 52.083 144 69 0 5 148 6 149 2.67e-49 167
MsG0180004743.01.T01 MTR_2g034790 46.500 200 98 3 1 194 1 197 4.54e-49 169
MsG0180004743.01.T01 MTR_2g067420 65.138 109 38 0 2 110 4 112 4.99e-49 169
MsG0180004743.01.T01 MTR_2g089450 62.931 116 43 0 1 116 1 116 6.37e-49 166
MsG0180004743.01.T01 MTR_8g027345 60.169 118 47 0 1 118 1 118 6.32e-48 165
MsG0180004743.01.T01 MTR_4g125520 59.829 117 47 0 1 117 1 117 7.59e-48 165
MsG0180004743.01.T01 MTR_1g017000 46.707 167 82 4 1 166 1 161 1.05e-47 163
MsG0180004743.01.T01 MTR_0008s0390 63.964 111 40 0 5 115 6 116 1.17e-47 163
MsG0180004743.01.T01 MTR_4g121460 63.793 116 42 0 1 116 1 116 1.49e-47 165
MsG0180004743.01.T01 MTR_7g117730 58.974 117 48 0 1 117 1 117 8.99e-47 160
MsG0180004743.01.T01 MTR_1g017140 60.833 120 46 1 1 119 1 120 3.74e-46 161
MsG0180004743.01.T01 MTR_0008s0470 58.621 116 47 1 1 115 1 116 1.49e-45 158
MsG0180004743.01.T01 MTR_4g057635 61.538 117 44 1 1 116 1 117 1.51e-45 159
MsG0180004743.01.T01 MTR_3g103570 58.333 120 49 1 1 119 1 120 5.84e-45 158
MsG0180004743.01.T01 MTR_5g014990 59.167 120 48 1 1 119 1 120 7.45e-45 157
MsG0180004743.01.T01 MTR_2g089420 61.818 110 42 0 7 116 6 115 1.07e-44 160
MsG0180004743.01.T01 MTR_7g010210 55.932 118 52 0 1 118 1 118 1.95e-44 156
MsG0180004743.01.T01 MTR_2g095520 63.063 111 40 1 1 110 1 111 2.04e-44 156
MsG0180004743.01.T01 MTR_7g010210 55.932 118 52 0 1 118 1 118 3.69e-44 154
MsG0180004743.01.T01 MTR_4g097570 61.818 110 41 1 1 109 1 110 1.25e-43 153
MsG0180004743.01.T01 MTR_0140s0030 57.759 116 49 0 1 116 2 117 1.62e-43 154
MsG0180004743.01.T01 MTR_0489s0020 57.759 116 49 0 1 116 2 117 1.62e-43 154
MsG0180004743.01.T01 MTR_7g111290 80.208 96 19 0 44 139 2 97 2.36e-43 154
MsG0180004743.01.T01 MTR_6g090405 58.621 116 47 1 1 115 1 116 4.33e-43 151
MsG0180004743.01.T01 MTR_7g102110 57.265 117 49 1 1 116 1 117 4.76e-43 151
MsG0180004743.01.T01 MTR_7g087130 54.400 125 55 1 1 123 1 125 8.72e-43 152
MsG0180004743.01.T01 MTR_7g109320 56.115 139 60 1 1 138 1 139 2.37e-42 152
MsG0180004743.01.T01 MTR_3g039990 55.932 118 52 0 1 118 2 119 2.51e-42 150
MsG0180004743.01.T01 MTR_0008s0280 61.321 106 41 0 9 114 9 114 2.54e-42 148
MsG0180004743.01.T01 MTR_4g097570 61.261 111 41 2 1 109 1 111 4.91e-42 149
MsG0180004743.01.T01 MTR_3g052430 62.617 107 40 0 12 118 41 147 5.43e-42 154
MsG0180004743.01.T01 MTR_3g052450 61.682 107 41 0 12 118 40 146 9.91e-42 154
MsG0180004743.01.T01 MTR_7g035075 55.000 120 52 1 1 118 1 120 3.20e-41 144
MsG0180004743.01.T01 MTR_0063s0090 44.186 172 86 2 9 170 9 180 3.47e-41 145
MsG0180004743.01.T01 MTR_4g128670 58.559 111 45 1 1 110 1 111 4.10e-41 148
MsG0180004743.01.T01 MTR_1g021230 49.020 153 66 2 12 154 57 207 4.15e-41 150
MsG0180004743.01.T01 MTR_6g012180 57.273 110 47 0 1 110 1 110 5.16e-41 147
MsG0180004743.01.T01 MTR_8g042410 62.264 106 40 0 12 117 37 142 8.66e-41 151
MsG0180004743.01.T01 MTR_1g110460 51.220 123 60 0 11 133 25 147 1.30e-40 146
MsG0180004743.01.T01 MTR_6g006030 58.333 108 45 0 11 118 13 120 1.51e-40 143
MsG0180004743.01.T01 MTR_3g045430 43.716 183 98 2 1 178 1 183 2.38e-40 145
MsG0180004743.01.T01 MTR_4g100720 59.813 107 43 0 9 115 10 116 3.32e-40 140
MsG0180004743.01.T01 MTR_1g073170 57.658 111 47 0 5 115 13 123 6.07e-40 142
MsG0180004743.01.T01 MTR_1g062940 54.887 133 53 2 12 143 6 132 8.49e-40 141
MsG0180004743.01.T01 MTR_3g011610 57.547 106 45 0 12 117 37 142 2.30e-39 147
MsG0180004743.01.T01 MTR_8g020490 55.455 110 49 0 10 119 6 115 2.74e-39 141
MsG0180004743.01.T01 MTR_1g045610 55.263 114 51 0 4 117 13 126 4.72e-39 140
MsG0180004743.01.T01 MTR_5g079120 44.667 150 71 1 9 158 58 195 2.33e-37 137
MsG0180004743.01.T01 MTR_0197s0010 60.000 100 40 0 17 116 6 105 3.95e-37 134
MsG0180004743.01.T01 MTR_1g086530 53.153 111 52 0 12 122 33 143 6.63e-37 135
MsG0180004743.01.T01 MTR_5g079290 52.727 110 52 0 12 121 17 126 7.67e-37 135
MsG0180004743.01.T01 MTR_5g079220 53.636 110 51 0 7 116 16 125 1.01e-36 135
MsG0180004743.01.T01 MTR_1g086510 52.893 121 56 1 12 132 21 140 1.08e-36 134
MsG0180004743.01.T01 MTR_5g078800 57.009 107 46 0 10 116 5 111 1.13e-36 134
MsG0180004743.01.T01 MTR_5g078910 55.140 107 48 0 10 116 5 111 1.19e-36 135
MsG0180004743.01.T01 MTR_2g088170 60.377 106 42 0 12 117 29 134 2.75e-36 137
MsG0180004743.01.T01 MTR_4g063100 54.206 107 49 0 13 119 8 114 8.77e-36 131
MsG0180004743.01.T01 MTR_8g060940 57.426 101 43 0 12 112 7 107 3.23e-35 130
MsG0180004743.01.T01 MTR_5g078860 55.238 105 47 0 12 116 7 111 3.66e-35 131
MsG0180004743.01.T01 MTR_2g096380 34.538 249 128 4 9 254 3 219 4.17e-35 129
MsG0180004743.01.T01 MTR_7g017260 53.636 110 49 1 12 119 25 134 4.92e-35 130
MsG0180004743.01.T01 MTR_5g078950 53.846 104 48 0 10 113 5 108 7.92e-35 129
MsG0180004743.01.T01 MTR_1g083630 57.009 107 46 0 11 117 11 117 9.70e-35 135
MsG0180004743.01.T01 MTR_4g029540 48.936 141 66 4 12 149 10 147 1.09e-34 130
MsG0180004743.01.T01 MTR_0001s0360 54.286 105 48 0 12 116 7 111 1.67e-34 128
MsG0180004743.01.T01 MTR_0247s0040 54.902 102 46 0 12 113 7 108 1.77e-34 126
MsG0180004743.01.T01 MTR_8g006470 53.636 110 50 1 9 117 7 116 1.89e-34 129
MsG0180004743.01.T01 MTR_5g078930 46.043 139 63 1 13 151 10 136 2.22e-34 127
MsG0180004743.01.T01 MTR_5g088640 45.522 134 71 2 13 145 13 145 2.79e-33 125
MsG0180004743.01.T01 MTR_5g088080 45.522 134 71 2 13 145 13 145 2.93e-33 125
MsG0180004743.01.T01 MTR_5g088150 45.522 134 71 2 13 145 13 145 2.93e-33 125
MsG0180004743.01.T01 MTR_5g488210 45.522 134 71 2 13 145 13 145 2.93e-33 125
MsG0180004743.01.T01 MTR_0193s0090 53.398 103 48 0 12 114 7 109 3.36e-33 123
MsG0180004743.01.T01 MTR_5g062790 45.522 134 71 2 13 145 10 142 5.72e-33 125
MsG0180004743.01.T01 MTR_5g488170 45.522 134 71 2 13 145 13 145 5.73e-33 124
MsG0180004743.01.T01 MTR_2g033170 54.054 111 51 0 12 122 24 134 2.74e-32 124
MsG0180004743.01.T01 MTR_5g007300 65.000 80 28 0 9 88 61 140 1.53e-31 117
MsG0180004743.01.T01 MTR_6g055910 68.293 82 25 1 45 125 18 99 2.21e-31 120
MsG0180004743.01.T01 MTR_4g019370 43.506 154 80 3 14 165 38 186 8.77e-31 120
MsG0180004743.01.T01 MTR_4g123040 53.153 111 52 0 12 122 24 134 1.47e-30 119
MsG0180004743.01.T01 MTR_5g088610 49.107 112 55 2 13 123 10 120 2.76e-29 116
MsG0180004743.01.T01 MTR_3g463400 45.161 124 64 3 12 132 131 253 1.43e-28 116
MsG0180004743.01.T01 MTR_4g063100 61.842 76 29 0 44 119 10 85 2.75e-28 110
MsG0180004743.01.T01 MTR_4g094982 52.941 102 47 1 14 115 5 105 3.59e-28 112
MsG0180004743.01.T01 MTR_5g070020 46.154 104 55 1 12 115 120 222 4.36e-28 113
MsG0180004743.01.T01 MTR_5g016510 46.341 123 65 1 14 136 5 126 3.46e-27 110
MsG0180004743.01.T01 MTR_2g096380 35.047 214 104 4 44 254 19 200 7.32e-27 107
MsG0180004743.01.T01 MTR_4g128190 41.892 148 66 4 12 158 11 139 8.72e-27 107
MsG0180004743.01.T01 MTR_7g061330 41.317 167 84 5 11 170 110 269 1.74e-26 111
MsG0180004743.01.T01 MTR_7g461410 41.317 167 84 5 11 170 110 269 1.74e-26 111
MsG0180004743.01.T01 MTR_7g061330 41.317 167 84 5 11 170 74 233 2.27e-26 110
MsG0180004743.01.T01 MTR_1g085880 43.333 150 76 5 10 151 9 157 4.15e-26 104
MsG0180004743.01.T01 MTR_1g085770 43.333 150 76 5 10 151 9 157 3.56e-25 104
MsG0180004743.01.T01 MTR_1g057980 46.000 100 53 1 12 111 78 176 4.36e-25 103
MsG0180004743.01.T01 MTR_7g035350 45.918 98 52 1 14 111 225 321 4.87e-25 106
MsG0180004743.01.T01 MTR_5g049190 39.744 156 83 4 9 155 14 167 7.61e-25 102
MsG0180004743.01.T01 MTR_3g101290 50.000 102 50 1 14 115 37 137 9.43e-25 101
MsG0180004743.01.T01 MTR_3g110028 47.170 106 55 1 11 116 82 186 1.29e-24 106
MsG0180004743.01.T01 MTR_3g077650 34.731 167 98 4 14 176 181 340 2.07e-24 104
MsG0180004743.01.T01 MTR_8g017480 78.846 52 11 0 1 52 1 52 3.15e-24 94.7
MsG0180004743.01.T01 MTR_6g074860 41.379 116 66 2 14 129 4 117 3.59e-24 100
MsG0180004743.01.T01 MTR_6g015455 47.748 111 57 1 14 124 5 114 4.14e-24 105
MsG0180004743.01.T01 MTR_7g451170 35.032 157 98 2 14 167 191 346 4.75e-24 103
MsG0180004743.01.T01 MTR_4g105660 41.071 112 63 2 9 119 175 284 8.93e-24 102
MsG0180004743.01.T01 MTR_7g037260 39.623 106 63 1 14 119 145 249 9.34e-24 101
MsG0180004743.01.T01 MTR_1g026870 45.283 106 57 1 11 116 82 186 1.19e-23 103
MsG0180004743.01.T01 MTR_6g027340 42.453 106 58 2 14 118 16 119 3.44e-23 96.7
MsG0180004743.01.T01 MTR_5g041570 40.367 109 64 1 11 119 131 238 4.42e-23 100
MsG0180004743.01.T01 MTR_6g027360 42.202 109 60 2 11 118 75 181 5.74e-23 98.2
MsG0180004743.01.T01 MTR_5g082910 48.485 99 50 1 14 112 19 116 5.88e-23 97.8
MsG0180004743.01.T01 MTR_4g088015 40.594 101 59 1 14 114 221 320 6.25e-23 100
MsG0180004743.01.T01 MTR_4g082040 41.509 106 61 1 14 119 105 209 6.53e-23 100
MsG0180004743.01.T01 MTR_7g037130 39.091 110 63 2 14 120 145 253 7.80e-22 95.9
MsG0180004743.01.T01 MTR_3g089045 43.925 107 57 2 14 119 16 120 1.13e-21 94.4
MsG0180004743.01.T01 MTR_5g010650 45.918 98 52 1 12 109 108 204 1.54e-21 96.3
MsG0180004743.01.T01 MTR_6g027370 40.952 105 61 1 14 118 99 202 2.32e-21 94.7
MsG0180004743.01.T01 MTR_0023s0210 50.649 77 38 0 12 88 7 83 1.27e-20 85.9
MsG0180004743.01.T01 MTR_7g086960 39.344 122 73 1 8 129 83 203 3.57e-20 91.3
MsG0180004743.01.T01 MTR_7g450950 37.736 106 64 2 14 119 157 260 7.00e-20 90.1
MsG0180004743.01.T01 MTR_7g061550 37.069 116 65 2 17 124 10 125 3.83e-19 88.2
MsG0180004743.01.T01 MTR_5g038910 36.190 105 66 1 17 121 29 132 9.10e-17 81.6
MsG0180004743.01.T01 MTR_5g038910 36.190 105 66 1 17 121 29 132 9.31e-17 82.0
MsG0180004743.01.T01 MTR_8g468380 35.354 99 63 1 17 115 25 122 2.61e-15 77.4
MsG0180004743.01.T01 MTR_6g055910 59.649 57 22 1 70 125 2 58 2.50e-14 72.0
MsG0180004743.01.T01 MTR_4g063100 57.447 47 20 0 73 119 4 50 2.98e-12 65.5
MsG0180004743.01.T01 MTR_2g096380 30.435 184 93 4 74 254 5 156 9.02e-12 63.5
MsG0180004743.01.T01 MTR_1g008970 37.805 82 51 0 35 116 111 192 3.72e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004743.01.T01 AT4G01680 84.211 152 23 1 1 152 1 151 2.18e-92 277
MsG0180004743.01.T01 AT4G01680 84.211 152 23 1 1 152 1 151 2.07e-91 278
MsG0180004743.01.T01 AT1G57560 51.211 289 129 6 1 278 1 288 1.66e-88 270
MsG0180004743.01.T01 AT4G01680 78.049 164 23 2 1 152 1 163 6.15e-88 270
MsG0180004743.01.T01 AT1G09540 40.625 416 162 11 1 384 1 363 6.94e-87 268
MsG0180004743.01.T01 AT1G57560 87.970 133 16 0 1 133 1 133 4.91e-85 260
MsG0180004743.01.T01 AT5G26660 86.822 129 17 0 1 129 1 129 6.87e-83 257
MsG0180004743.01.T01 AT3G12720 70.635 126 36 1 1 126 12 136 6.81e-66 212
MsG0180004743.01.T01 AT3G13890 76.724 116 27 0 1 116 1 116 3.18e-65 212
MsG0180004743.01.T01 AT3G61250 68.992 129 40 0 1 129 1 129 5.35e-63 204
MsG0180004743.01.T01 AT1G63910 67.969 128 41 0 1 128 1 128 7.63e-63 206
MsG0180004743.01.T01 AT3G02940 64.885 131 46 0 1 131 1 131 2.13e-62 203
MsG0180004743.01.T01 AT3G13890 71.200 125 27 1 1 116 1 125 4.27e-62 204
MsG0180004743.01.T01 AT3G02940 64.885 131 46 0 1 131 1 131 6.30e-62 202
MsG0180004743.01.T01 AT3G02940 64.885 131 46 0 1 131 1 131 6.30e-62 202
MsG0180004743.01.T01 AT5G16770 64.885 131 46 0 1 131 1 131 9.93e-62 202
MsG0180004743.01.T01 AT5G16770 64.885 131 46 0 1 131 1 131 9.93e-62 202
MsG0180004743.01.T01 AT5G16770 64.885 131 46 0 1 131 1 131 2.43e-61 201
MsG0180004743.01.T01 AT5G16770 64.885 131 46 0 1 131 1 131 2.43e-61 201
MsG0180004743.01.T01 AT5G15310 66.667 132 44 0 1 132 1 132 8.31e-61 199
MsG0180004743.01.T01 AT5G15310 66.667 132 44 0 1 132 1 132 8.58e-61 199
MsG0180004743.01.T01 AT5G15310 66.667 132 44 0 1 132 1 132 1.37e-60 196
MsG0180004743.01.T01 AT4G34990 57.237 152 64 1 1 151 1 152 1.88e-60 197
MsG0180004743.01.T01 AT3G01140 66.667 132 44 0 1 132 1 132 4.31e-60 198
MsG0180004743.01.T01 AT1G66230 62.500 144 54 0 1 144 1 144 8.87e-60 195
MsG0180004743.01.T01 AT2G16720 61.654 133 51 0 1 133 1 133 4.12e-59 193
MsG0180004743.01.T01 AT4G05100 65.116 129 44 1 1 128 1 129 5.52e-59 194
MsG0180004743.01.T01 AT4G38620 54.658 161 62 2 1 158 1 153 6.72e-59 193
MsG0180004743.01.T01 AT5G16600 62.676 142 53 0 1 142 1 142 7.84e-59 194
MsG0180004743.01.T01 AT1G34670 63.636 132 48 0 1 132 1 132 9.28e-59 195
MsG0180004743.01.T01 AT4G21440 64.844 128 45 0 1 128 1 128 9.76e-59 194
MsG0180004743.01.T01 AT4G09460 52.047 171 82 0 1 171 1 171 1.18e-58 191
MsG0180004743.01.T01 AT4G28110 64.062 128 46 0 1 128 1 128 4.87e-58 191
MsG0180004743.01.T01 AT5G60890 57.971 138 58 0 1 138 1 138 5.53e-58 191
MsG0180004743.01.T01 AT4G12350 63.636 132 48 0 1 132 1 132 7.69e-58 190
MsG0180004743.01.T01 AT5G56110 64.394 132 47 0 1 132 1 132 1.18e-57 191
MsG0180004743.01.T01 AT5G65230 64.122 131 47 0 1 131 1 131 1.67e-57 190
MsG0180004743.01.T01 AT4G22680 61.481 135 52 0 1 135 1 135 1.96e-57 189
MsG0180004743.01.T01 AT5G10280 61.364 132 51 0 1 132 1 132 2.23e-57 191
MsG0180004743.01.T01 AT3G01140 68.852 122 38 0 6 127 49 170 2.59e-57 192
MsG0180004743.01.T01 AT1G22640 61.069 131 51 0 1 131 1 131 5.44e-57 187
MsG0180004743.01.T01 AT5G61420 60.448 134 53 0 1 134 1 134 7.29e-57 190
MsG0180004743.01.T01 AT5G07690 59.712 139 56 0 1 139 1 139 2.18e-56 188
MsG0180004743.01.T01 AT4G17785 64.341 129 45 1 1 128 1 129 6.97e-56 187
MsG0180004743.01.T01 AT4G17785 64.341 129 45 1 1 128 1 129 7.67e-56 187
MsG0180004743.01.T01 AT5G12870 72.477 109 30 0 10 118 16 124 2.66e-55 184
MsG0180004743.01.T01 AT5G14340 51.176 170 80 1 1 170 13 179 4.14e-55 183
MsG0180004743.01.T01 AT5G07700 50.279 179 74 2 1 164 1 179 4.33e-55 185
MsG0180004743.01.T01 AT5G07700 50.279 179 74 2 1 164 1 179 4.33e-55 185
MsG0180004743.01.T01 AT3G08500 70.940 117 31 1 4 117 19 135 5.55e-55 184
MsG0180004743.01.T01 AT1G74430 63.281 128 47 0 1 128 1 128 7.88e-55 182
MsG0180004743.01.T01 AT1G18570 61.069 131 50 1 1 130 1 131 1.10e-54 184
MsG0180004743.01.T01 AT1G35515 59.542 131 53 0 1 131 1 131 3.48e-54 178
MsG0180004743.01.T01 AT3G28470 61.364 132 51 0 1 132 1 132 2.22e-53 180
MsG0180004743.01.T01 AT1G74080 59.690 129 52 0 1 129 1 129 2.89e-53 180
MsG0180004743.01.T01 AT5G54230 61.719 128 49 0 1 128 1 128 3.90e-53 179
MsG0180004743.01.T01 AT3G23250 64.655 116 41 0 1 116 1 116 5.64e-53 177
MsG0180004743.01.T01 AT1G79180 67.521 117 38 0 2 118 4 120 1.25e-52 177
MsG0180004743.01.T01 AT3G13540 62.097 124 47 0 6 129 17 140 2.55e-52 175
MsG0180004743.01.T01 AT2G31180 49.432 176 84 2 1 173 1 174 4.25e-52 174
MsG0180004743.01.T01 AT1G06180 39.841 251 126 4 1 244 1 233 5.73e-51 171
MsG0180004743.01.T01 AT5G26660 83.333 90 15 0 40 129 9 98 8.29e-51 173
MsG0180004743.01.T01 AT5G62320 56.250 144 56 1 2 138 3 146 1.22e-50 170
MsG0180004743.01.T01 AT3G48920 67.568 111 36 0 9 119 15 125 1.50e-50 171
MsG0180004743.01.T01 AT1G16490 56.849 146 59 1 2 143 4 149 2.17e-50 171
MsG0180004743.01.T01 AT1G18710 58.140 129 54 0 1 129 1 129 2.45e-50 170
MsG0180004743.01.T01 AT1G56160 65.217 115 40 0 2 116 4 118 1.40e-49 169
MsG0180004743.01.T01 AT4G25560 40.625 256 119 7 8 255 6 236 3.39e-47 162
MsG0180004743.01.T01 AT5G23000 62.393 117 43 1 1 116 1 117 3.87e-47 164
MsG0180004743.01.T01 AT5G57620 60.000 125 47 2 1 122 1 125 1.13e-46 162
MsG0180004743.01.T01 AT5G49330 62.931 116 43 0 1 116 1 116 1.46e-46 162
MsG0180004743.01.T01 AT5G52260 71.028 107 31 0 9 115 9 115 3.47e-46 159
MsG0180004743.01.T01 AT2G47460 57.576 132 56 0 1 132 1 132 3.72e-46 162
MsG0180004743.01.T01 AT3G62610 62.069 116 44 0 1 116 1 116 5.82e-46 161
MsG0180004743.01.T01 AT3G49690 60.833 120 46 1 1 119 1 120 7.17e-46 160
MsG0180004743.01.T01 AT1G79180 52.667 150 38 1 2 118 4 153 8.78e-46 160
MsG0180004743.01.T01 AT3G12820 61.538 117 45 0 3 119 5 121 9.71e-46 157
MsG0180004743.01.T01 AT5G65790 60.000 120 47 1 1 119 1 120 2.14e-45 160
MsG0180004743.01.T01 AT3G47600 57.627 118 50 0 1 118 1 118 1.05e-44 157
MsG0180004743.01.T01 AT1G74650 59.483 116 47 0 1 116 1 116 1.65e-44 157
MsG0180004743.01.T01 AT5G62470 51.370 146 64 1 1 146 1 139 2.36e-44 157
MsG0180004743.01.T01 AT4G37780 44.974 189 90 5 1 188 1 176 2.47e-44 155
MsG0180004743.01.T01 AT2G36890 55.906 127 55 1 1 126 1 127 1.31e-43 154
MsG0180004743.01.T01 AT2G36890 55.906 127 55 1 1 126 42 168 1.92e-43 154
MsG0180004743.01.T01 AT1G08810 55.738 122 54 0 1 122 1 122 2.14e-43 152
MsG0180004743.01.T01 AT5G35550 59.322 118 46 1 1 116 1 118 7.27e-43 150
MsG0180004743.01.T01 AT5G62470 51.370 146 63 2 1 146 1 138 1.42e-42 152
MsG0180004743.01.T01 AT5G06100 62.037 108 41 0 10 117 30 137 5.80e-42 153
MsG0180004743.01.T01 AT5G14750 56.731 104 45 0 13 116 17 120 7.11e-42 146
MsG0180004743.01.T01 AT3G28910 57.759 116 49 0 1 116 1 116 8.70e-42 149
MsG0180004743.01.T01 AT3G27810 55.856 111 49 0 11 121 19 129 1.69e-41 146
MsG0180004743.01.T01 AT5G06100 62.037 108 41 0 10 117 30 137 2.14e-41 152
MsG0180004743.01.T01 AT5G06100 62.037 108 41 0 10 117 30 137 2.14e-41 152
MsG0180004743.01.T01 AT5G06100 62.037 108 41 0 10 117 30 137 2.14e-41 152
MsG0180004743.01.T01 AT5G06100 62.037 108 41 0 10 117 30 137 2.14e-41 152
MsG0180004743.01.T01 AT3G01530 57.547 106 45 0 12 117 25 130 3.41e-41 144
MsG0180004743.01.T01 AT5G55020 60.748 107 42 0 12 118 26 132 7.91e-41 151
MsG0180004743.01.T01 AT3G11440 60.377 106 42 0 12 117 41 146 1.68e-40 149
MsG0180004743.01.T01 AT5G40330 55.769 104 46 0 13 116 13 116 1.77e-40 143
MsG0180004743.01.T01 AT4G26930 59.813 107 43 0 12 118 19 125 1.78e-40 147
MsG0180004743.01.T01 AT5G40350 56.364 110 48 0 11 120 16 125 1.84e-40 143
MsG0180004743.01.T01 AT5G52600 44.805 154 70 2 9 147 9 162 2.11e-40 142
MsG0180004743.01.T01 AT3G27920 53.271 107 50 0 10 116 12 118 5.16e-40 142
MsG0180004743.01.T01 AT3G11440 58.716 109 45 0 9 117 38 146 8.22e-40 149
MsG0180004743.01.T01 AT3G11440 58.716 109 45 0 9 117 38 146 8.22e-40 149
MsG0180004743.01.T01 AT3G11440 58.716 109 45 0 9 117 38 146 8.22e-40 149
MsG0180004743.01.T01 AT2G32460 56.481 108 47 0 10 117 16 123 2.18e-39 147
MsG0180004743.01.T01 AT2G32460 56.481 108 47 0 10 117 4 111 2.41e-39 146
MsG0180004743.01.T01 AT2G26960 54.867 113 50 1 9 121 17 128 2.95e-39 145
MsG0180004743.01.T01 AT4G13480 60.952 105 41 0 13 117 7 111 9.03e-39 140
MsG0180004743.01.T01 AT3G24310 60.000 105 42 0 13 117 19 123 4.18e-38 138
MsG0180004743.01.T01 AT1G25340 52.500 120 57 0 13 132 19 138 6.16e-38 138
MsG0180004743.01.T01 AT3G30210 60.784 102 40 0 13 114 28 129 9.02e-38 137
MsG0180004743.01.T01 AT1G48000 56.731 104 45 0 11 114 31 134 3.13e-37 135
MsG0180004743.01.T01 AT1G68320 52.033 123 59 0 10 132 17 139 3.19e-37 136
MsG0180004743.01.T01 AT3G53200 56.075 107 47 0 9 115 6 112 6.01e-36 132
MsG0180004743.01.T01 AT1G66370 56.731 104 45 0 12 115 8 111 9.38e-36 131
MsG0180004743.01.T01 AT2G26950 50.435 115 54 1 6 120 10 121 1.61e-35 134
MsG0180004743.01.T01 AT5G59780 52.252 111 53 0 9 119 5 115 6.59e-35 129
MsG0180004743.01.T01 AT2G47190 49.550 111 56 0 12 122 20 130 7.06e-35 130
MsG0180004743.01.T01 AT3G46130 53.271 107 50 0 13 119 10 116 3.12e-34 127
MsG0180004743.01.T01 AT1G56650 51.200 125 53 1 12 128 8 132 5.05e-34 127
MsG0180004743.01.T01 AT1G66380 59.615 104 42 0 12 115 8 111 1.21e-33 122
MsG0180004743.01.T01 AT3G60460 49.580 119 53 2 9 126 8 120 1.55e-33 127
MsG0180004743.01.T01 AT3G06490 56.757 111 48 0 12 122 19 129 3.72e-33 126
MsG0180004743.01.T01 AT1G25340 50.000 120 55 1 13 132 19 133 4.01e-33 125
MsG0180004743.01.T01 AT1G25340 50.000 120 55 1 13 132 19 133 1.09e-32 125
MsG0180004743.01.T01 AT1G66390 57.547 106 45 0 10 115 6 111 5.66e-32 121
MsG0180004743.01.T01 AT5G49620 54.054 111 51 0 12 122 26 136 4.35e-31 120
MsG0180004743.01.T01 AT5G35550 63.043 92 26 1 25 116 38 121 8.47e-31 119
MsG0180004743.01.T01 AT3G12820 69.444 72 22 0 48 119 2 73 1.38e-30 116
MsG0180004743.01.T01 AT3G27810 61.039 77 30 0 45 121 4 80 4.09e-30 114
MsG0180004743.01.T01 AT5G14750 65.217 69 24 0 48 116 18 86 7.12e-29 110
MsG0180004743.01.T01 AT5G40350 61.842 76 29 0 45 120 5 80 1.09e-28 110
MsG0180004743.01.T01 AT3G46130 61.842 76 29 0 44 119 9 84 4.94e-28 110
MsG0180004743.01.T01 AT3G47600 53.684 95 40 1 24 118 22 112 8.45e-28 112
MsG0180004743.01.T01 AT5G59780 61.039 77 30 0 43 119 18 94 1.12e-27 108
MsG0180004743.01.T01 AT3G46130 61.039 77 30 0 43 119 18 94 1.12e-27 109
MsG0180004743.01.T01 AT5G49620 48.000 125 51 1 12 122 26 150 1.28e-27 111
MsG0180004743.01.T01 AT1G18960 44.167 120 62 3 14 132 10 125 1.33e-27 111
MsG0180004743.01.T01 AT3G53200 63.158 76 28 0 40 115 4 79 1.48e-27 108
MsG0180004743.01.T01 AT4G18770 45.045 111 60 1 9 119 212 321 2.05e-27 112
MsG0180004743.01.T01 AT1G22640 60.811 74 29 0 58 131 1 74 2.76e-27 107
MsG0180004743.01.T01 AT5G67300 51.961 102 48 1 14 115 6 106 1.13e-26 108
MsG0180004743.01.T01 AT5G40360 44.444 108 58 2 9 116 153 258 1.79e-26 108
MsG0180004743.01.T01 AT3G27785 43.333 120 63 3 9 125 184 301 5.54e-26 108
MsG0180004743.01.T01 AT5G58850 41.935 124 66 2 12 135 103 220 6.22e-26 108
MsG0180004743.01.T01 AT4G37260 50.467 107 52 1 14 120 13 118 8.18e-26 106
MsG0180004743.01.T01 AT2G39880 54.369 103 44 2 14 115 50 150 1.35e-25 106
MsG0180004743.01.T01 AT3G50060 51.961 102 48 1 14 115 6 106 1.79e-25 105
MsG0180004743.01.T01 AT1G71030 55.844 77 34 0 51 127 5 81 3.75e-25 101
MsG0180004743.01.T01 AT5G02320 47.170 106 55 1 11 116 124 228 4.80e-25 107
MsG0180004743.01.T01 AT5G02320 47.170 106 55 1 11 116 124 228 4.80e-25 107
MsG0180004743.01.T01 AT1G71030 55.844 77 34 0 51 127 19 95 4.81e-25 101
MsG0180004743.01.T01 AT5G02320 47.619 105 54 1 12 116 65 168 5.32e-25 106
MsG0180004743.01.T01 AT3G09370 49.038 104 52 1 12 115 128 230 6.31e-25 106
MsG0180004743.01.T01 AT3G09370 49.038 104 52 1 12 115 133 235 6.37e-25 106
MsG0180004743.01.T01 AT3G55730 52.427 103 46 2 14 115 56 156 1.00e-24 104
MsG0180004743.01.T01 AT5G11050 43.137 102 57 1 14 115 105 205 1.08e-24 105
MsG0180004743.01.T01 AT3G09370 49.038 104 52 1 12 115 141 243 1.12e-24 105
MsG0180004743.01.T01 AT3G09230 48.544 103 52 1 14 116 55 156 1.66e-24 104
MsG0180004743.01.T01 AT1G17950 43.396 106 59 1 14 119 5 109 2.53e-24 100
MsG0180004743.01.T01 AT3G23250 69.492 59 18 0 58 116 1 59 3.24e-24 100
MsG0180004743.01.T01 AT5G11510 45.283 106 57 1 11 116 78 182 7.10e-24 104
MsG0180004743.01.T01 AT5G11510 45.283 106 57 1 11 116 78 182 7.10e-24 104
MsG0180004743.01.T01 AT5G11510 45.283 106 57 1 11 116 78 182 7.10e-24 104
MsG0180004743.01.T01 AT5G11510 45.283 106 57 1 11 116 78 182 9.39e-24 103
MsG0180004743.01.T01 AT5G11510 45.283 106 57 1 11 116 78 182 1.12e-23 103
MsG0180004743.01.T01 AT1G69560 41.071 112 63 2 9 119 102 211 1.18e-23 100
MsG0180004743.01.T01 AT1G69560 41.071 112 63 2 9 119 118 227 1.20e-23 100
MsG0180004743.01.T01 AT2G23290 50.000 102 50 1 14 115 13 113 1.50e-23 100
MsG0180004743.01.T01 AT1G73410 47.170 106 53 2 14 118 6 109 5.80e-23 97.1
MsG0180004743.01.T01 AT1G26780 42.593 108 59 2 12 118 96 201 8.46e-23 97.4
MsG0180004743.01.T01 AT1G26780 42.593 108 59 2 12 118 96 201 9.29e-23 98.6
MsG0180004743.01.T01 AT4G32730 44.340 106 58 1 11 116 84 188 1.12e-22 100
MsG0180004743.01.T01 AT4G32730 44.340 106 58 1 11 116 84 188 1.12e-22 100
MsG0180004743.01.T01 AT4G32730 44.340 106 58 1 11 116 84 188 1.12e-22 100
MsG0180004743.01.T01 AT4G32730 44.340 106 58 1 11 116 84 188 1.12e-22 100
MsG0180004743.01.T01 AT4G32730 44.340 106 58 1 11 116 84 188 1.32e-22 100
MsG0180004743.01.T01 AT1G73410 47.170 106 53 2 14 118 6 109 2.05e-22 94.4
MsG0180004743.01.T01 AT2G25230 39.831 118 68 2 9 124 21 137 4.58e-22 94.4
MsG0180004743.01.T01 AT4G33450 40.000 110 65 1 9 118 14 122 4.68e-22 94.7
MsG0180004743.01.T01 AT1G66380 58.442 77 32 0 39 115 2 78 6.99e-22 90.1
MsG0180004743.01.T01 AT1G66380 57.500 80 34 0 10 89 6 85 7.58e-22 90.1
MsG0180004743.01.T01 AT5G17800 40.000 105 62 1 14 118 93 196 3.80e-21 93.6
MsG0180004743.01.T01 AT3G29020 37.838 111 68 1 14 124 65 174 1.30e-20 90.1
MsG0180004743.01.T01 AT3G29020 38.679 106 64 1 14 119 67 171 1.47e-20 91.7
MsG0180004743.01.T01 AT5G14750 58.065 62 26 0 58 119 1 62 2.77e-20 86.7
MsG0180004743.01.T01 AT5G14750 58.065 62 26 0 58 119 1 62 2.77e-20 86.7
MsG0180004743.01.T01 AT2G02820 38.655 119 71 2 4 121 19 136 7.54e-20 90.1
MsG0180004743.01.T01 AT2G02820 38.655 119 71 2 4 121 19 136 1.11e-19 90.9
MsG0180004743.01.T01 AT2G02820 38.655 119 71 2 4 121 19 136 1.81e-19 90.5
MsG0180004743.01.T01 AT4G00540 43.636 110 58 2 12 118 101 209 2.72e-19 89.4
MsG0180004743.01.T01 AT5G40430 39.640 111 64 3 9 119 49 156 4.54e-19 86.3
MsG0180004743.01.T01 AT4G00540 43.636 110 58 2 12 118 99 207 4.94e-19 88.6
MsG0180004743.01.T01 AT1G14350 40.000 105 62 1 17 121 28 131 3.34e-18 86.3
MsG0180004743.01.T01 AT1G14350 40.000 105 62 1 17 121 28 131 3.34e-18 86.3
MsG0180004743.01.T01 AT5G61420 68.519 54 17 0 81 134 2 55 6.13e-18 84.0
MsG0180004743.01.T01 AT2G37630 35.652 115 67 2 17 124 7 121 1.07e-16 81.3
MsG0180004743.01.T01 AT5G39700 33.621 116 76 1 9 124 51 165 4.44e-16 76.3
MsG0180004743.01.T01 AT1G74430 61.538 52 20 0 77 128 8 59 3.45e-15 74.3
MsG0180004743.01.T01 AT4G28110 73.171 41 11 0 88 128 4 44 1.29e-14 72.4
MsG0180004743.01.T01 AT5G15310 71.111 45 13 0 88 132 9 53 4.43e-14 72.0
MsG0180004743.01.T01 AT5G14340 39.759 83 47 1 88 170 10 89 6.41e-14 70.1
MsG0180004743.01.T01 AT5G59780 59.574 47 19 0 73 119 4 50 3.40e-13 67.8
MsG0180004743.01.T01 AT3G46130 59.574 47 19 0 73 119 4 50 4.17e-13 67.8
MsG0180004743.01.T01 AT1G14350 45.455 66 36 0 56 121 23 88 1.68e-12 68.9
MsG0180004743.01.T01 AT1G14350 45.455 66 36 0 56 121 23 88 1.68e-12 68.9
MsG0180004743.01.T01 AT4G25560 65.217 46 16 0 70 115 2 47 2.60e-12 66.2
MsG0180004743.01.T01 AT3G18100 37.500 96 59 1 13 108 545 639 1.03e-11 67.0
MsG0180004743.01.T01 AT3G18100 37.500 96 59 1 13 108 384 478 1.24e-11 66.6
MsG0180004743.01.T01 AT3G18100 37.500 96 59 1 13 108 497 591 1.33e-11 66.6
MsG0180004743.01.T01 AT3G18100 37.500 96 59 1 13 108 332 426 1.70e-11 66.2
MsG0180004743.01.T01 AT1G22640 59.091 44 18 0 88 131 16 59 2.18e-11 62.8

Find 68 sgRNAs with CRISPR-Local

Find 94 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATACAGAAGAAGCTAAA+TGG 0.220741 1:-82015471 MsG0180004743.01.T01:CDS
ATTGTTGTTATGTAAGTTTA+AGG 0.238149 1:+82015522 None:intergenic
ATTTCCATTGCATATGCTTT+TGG 0.239502 1:+82015853 None:intergenic
TTTCAAAAGGTTCAATTCAT+TGG 0.290203 1:+82015939 None:intergenic
CAGAAACTCAGAGAAGCTTT+TGG 0.294526 1:-82015268 MsG0180004743.01.T01:CDS
TCTGGTACAAAGTTCATTAA+TGG 0.301366 1:+82015373 None:intergenic
CATTCAACCCTCAGATTTGA+TGG 0.319312 1:-82015791 MsG0180004743.01.T01:CDS
AACTTTGTACCAGATAGTTT+TGG 0.328603 1:-82015364 MsG0180004743.01.T01:CDS
CTACTAGTGTTTGAATCATT+TGG 0.336320 1:+82015718 None:intergenic
TTCTTCTTGGGGAGGATTGA+TGG 0.346985 1:-82015497 MsG0180004743.01.T01:CDS
TCAAATTGCGGCGCAATTAC+CGG 0.347948 1:-82016127 MsG0180004743.01.T01:CDS
ACAATGAAATAAAGAATCTA+TGG 0.352801 1:-82016095 MsG0180004743.01.T01:CDS
GTTGAACTTCATGCAGTACT+AGG 0.358540 1:-82016321 MsG0180004743.01.T01:CDS
TCAGAAGCCAACATTAAGAT+AGG 0.359272 1:+82015421 None:intergenic
AAAATAGCTCCAAAACTATC+TGG 0.372468 1:+82015355 None:intergenic
AACCATTGGTTCAACCAAAC+TGG 0.373334 1:-82015694 MsG0180004743.01.T01:CDS
AAGAAGAGACTGAGGCAAAA+AGG 0.381753 1:-82016060 MsG0180004743.01.T01:CDS
TTGTCTGAGGTTGAGAATAA+TGG 0.383111 1:-82016012 MsG0180004743.01.T01:CDS
AAAAGCATATGCAATGGAAA+TGG 0.406668 1:-82015851 MsG0180004743.01.T01:CDS
TCTGAGTTTCTGAATGTCCT+TGG 0.406727 1:+82015279 None:intergenic
TCTTGTTCTTGCTTTGTATG+AGG 0.413126 1:+82015331 None:intergenic
CTGAGGCATATAACAAAGTA+TGG 0.421343 1:-82016583 MsG0180004743.01.T01:CDS
TTGAACTCTCTGATTTCAAA+AGG 0.423755 1:+82015926 None:intergenic
CAAATTGCGGCGCAATTACC+GGG 0.427154 1:-82016126 MsG0180004743.01.T01:CDS
TCATACAGAAGAAGCTAAAT+GGG 0.442713 1:-82015470 MsG0180004743.01.T01:CDS
ATTAATTTACCTGCTTGCTT+AGG 0.450338 1:+82016538 None:intergenic
GTTGTTACAAGCAGAAGCTT+AGG 0.455012 1:-82016642 MsG0180004743.01.T01:CDS
TTCCAGTTTGGTTGAACCAA+TGG 0.463181 1:+82015692 None:intergenic
TGTTTGTATAACTCATTTGA+AGG 0.475874 1:+82015758 None:intergenic
TCAAAACCCTATCTTAATGT+TGG 0.484585 1:-82015428 MsG0180004743.01.T01:CDS
CAAAGTATGGTCATGGATGT+TGG 0.495747 1:-82016570 MsG0180004743.01.T01:CDS
TTCATGCAGTACTAGGGAAT+AGG 0.501696 1:-82016314 MsG0180004743.01.T01:intron
TCATTGGATAGTAATATCTC+TGG 0.506328 1:+82015955 None:intergenic
GTGGTAAGAGCTGCAGGCTA+AGG 0.513697 1:-82016410 MsG0180004743.01.T01:CDS
GACAATGGTTTATGAGTCAC+AGG 0.514909 1:+82016030 None:intergenic
TTATTCTCAACCTCAGACAA+TGG 0.517875 1:+82016015 None:intergenic
AAAGATGTGGTAAGAGCTGC+AGG 0.517924 1:-82016416 MsG0180004743.01.T01:CDS
AGAAGCTTAGGAAAGGTCTA+TGG 0.519654 1:-82016630 MsG0180004743.01.T01:CDS
ATTTCATTGTCTGTCCTCCC+CGG 0.522422 1:+82016108 None:intergenic
GTAAGAGCTGCAGGCTAAGG+TGG 0.533022 1:-82016407 MsG0180004743.01.T01:CDS
GTTTGTATAACTCATTTGAA+GGG 0.533524 1:+82015759 None:intergenic
CATATAACAAAGTATGGTCA+TGG 0.533584 1:-82016577 MsG0180004743.01.T01:CDS
ATTCAACCCTCAGATTTGAT+GGG 0.538604 1:-82015790 MsG0180004743.01.T01:CDS
CATGGTTGTTGATGTTGATG+TGG 0.542885 1:+82015630 None:intergenic
TTGAACTTCATGCAGTACTA+GGG 0.545997 1:-82016320 MsG0180004743.01.T01:CDS
ATGGTTGTTGATGTTGATGT+GGG 0.549942 1:+82015631 None:intergenic
TACCAGATGGTCTCAAATTG+CGG 0.550232 1:-82016139 MsG0180004743.01.T01:intron
ATAATTTCCCATCAAATCTG+AGG 0.562782 1:+82015783 None:intergenic
TTATCAGGTTTGCAAAGATG+TGG 0.565876 1:-82016429 MsG0180004743.01.T01:intron
CAGAAGCCAACATTAAGATA+GGG 0.569917 1:+82015422 None:intergenic
TTTGTATAACTCATTTGAAG+GGG 0.572929 1:+82015760 None:intergenic
TTCACCAAAAGCATATGCAA+TGG 0.574736 1:-82015857 MsG0180004743.01.T01:CDS
AGGAAAATTCACAAATGGGA+AGG 0.581895 1:-82016672 None:intergenic
GGTACAAAGTTCATTAATGG+AGG 0.582508 1:+82015376 None:intergenic
CTCTGTAGAAACATTGTCAG+AGG 0.586264 1:+82015564 None:intergenic
CTTGTTTGAAGAAGAGACTG+AGG 0.589737 1:-82016068 MsG0180004743.01.T01:CDS
CAAACACTAGTAGTAACCAT+TGG 0.594685 1:-82015708 MsG0180004743.01.T01:CDS
TAATTTCCCATCAAATCTGA+GGG 0.601910 1:+82015784 None:intergenic
GCATATGCAATGGAAATGGA+AGG 0.607612 1:-82015847 MsG0180004743.01.T01:CDS
AAGAGGAACATTCTCACAAG+AGG 0.608650 1:-82016358 MsG0180004743.01.T01:CDS
TACAAGCAGAAGCTTAGGAA+AGG 0.614815 1:-82016637 MsG0180004743.01.T01:CDS
AGTTCAGTACCTAAGCAAGC+AGG 0.631698 1:-82016547 MsG0180004743.01.T01:intron
TCTGTAGAAACATTGTCAGA+GGG 0.637560 1:+82015565 None:intergenic
TGAGGTTGAGAATAATGGAG+AGG 0.653412 1:-82016007 MsG0180004743.01.T01:CDS
GACTCATAAACCATTGTCTG+AGG 0.676132 1:-82016025 MsG0180004743.01.T01:CDS
AAAAGAATTAGGAAGAAACA+TGG 0.684494 1:+82015612 None:intergenic
TTGCGGCGCAATTACCGGGG+AGG 0.693671 1:-82016122 MsG0180004743.01.T01:CDS
AAATTGCGGCGCAATTACCG+GGG 0.696240 1:-82016125 MsG0180004743.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGAACATAATTTTTTAAAA+CGG + Chr1:82015749-82015768 None:intergenic 10.0%
!!! TTTTGTTTATTATTATTATC+AGG - Chr1:82015472-82015491 MsG0180004743.01.T01:CDS 10.0%
!! ACATTATTATTATATGCTAA+TGG + Chr1:82015419-82015438 None:intergenic 15.0%
!! ACAATGAAATAAAGAATCTA+TGG - Chr1:82015821-82015840 MsG0180004743.01.T01:CDS 20.0%
!!! AACTTCTAATATATTTTCCA+AGG - Chr1:82016620-82016639 MsG0180004743.01.T01:CDS 20.0%
!!! ATAACAACAATTTTTCTTCT+TGG - Chr1:82016406-82016425 MsG0180004743.01.T01:CDS 20.0%
!!! ATTGTTGTTATGTAAGTTTA+AGG + Chr1:82016397-82016416 None:intergenic 20.0%
!!! TAACAACAATTTTTCTTCTT+GGG - Chr1:82016407-82016426 MsG0180004743.01.T01:CDS 20.0%
! AAAAGAATTAGGAAGAAACA+TGG + Chr1:82016307-82016326 None:intergenic 25.0%
! ACCATAGGAGAAAATAAAAA+AGG + Chr1:82015653-82015672 None:intergenic 25.0%
! CCATAGGAGAAAATAAAAAA+GGG + Chr1:82015652-82015671 None:intergenic 25.0%
! GTTTGTATAACTCATTTGAA+GGG + Chr1:82016160-82016179 None:intergenic 25.0%
! TGTTTGTATAACTCATTTGA+AGG + Chr1:82016161-82016180 None:intergenic 25.0%
! TTAAGACCTGATTTAAAAAG+AGG - Chr1:82015541-82015560 MsG0180004743.01.T01:CDS 25.0%
! TTTCAAAAGGTTCAATTCAT+TGG + Chr1:82015980-82015999 None:intergenic 25.0%
! TTTGTATAACTCATTTGAAG+GGG + Chr1:82016159-82016178 None:intergenic 25.0%
!! AACAACAATTTTTCTTCTTG+GGG - Chr1:82016408-82016427 MsG0180004743.01.T01:CDS 25.0%
!! AATGTTCCTCTTTTTAAATC+AGG + Chr1:82015550-82015569 None:intergenic 25.0%
!! ACAAAGAGTTTTTCATAGAT+AGG - Chr1:82016100-82016119 MsG0180004743.01.T01:CDS 25.0%
!! TATCAAAAGATTTTCCAGTT+TGG + Chr1:82016239-82016258 None:intergenic 25.0%
!!! TTTTATTTTCTCCTATGGTT+AGG - Chr1:82015654-82015673 MsG0180004743.01.T01:CDS 25.0%
AAAATAGCTCCAAAACTATC+TGG + Chr1:82016564-82016583 None:intergenic 30.0%
AAGAAGATGAAAAACTACTG+AGG - Chr1:82015316-82015335 MsG0180004743.01.T01:CDS 30.0%
ATAATTTCCCATCAAATCTG+AGG + Chr1:82016136-82016155 None:intergenic 30.0%
ATCATACAGAAGAAGCTAAA+TGG - Chr1:82016445-82016464 MsG0180004743.01.T01:intron 30.0%
ATTAATTTACCTGCTTGCTT+AGG + Chr1:82015381-82015400 None:intergenic 30.0%
CATATAACAAAGTATGGTCA+TGG - Chr1:82015339-82015358 MsG0180004743.01.T01:CDS 30.0%
CTACTAGTGTTTGAATCATT+TGG + Chr1:82016201-82016220 None:intergenic 30.0%
TAATTTCCCATCAAATCTGA+GGG + Chr1:82016135-82016154 None:intergenic 30.0%
TATGCTAATGGAGATAGAAT+TGG + Chr1:82015407-82015426 None:intergenic 30.0%
TCAAAACCCTATCTTAATGT+TGG - Chr1:82016488-82016507 MsG0180004743.01.T01:intron 30.0%
TCATACAGAAGAAGCTAAAT+GGG - Chr1:82016446-82016465 MsG0180004743.01.T01:intron 30.0%
TCATTGGATAGTAATATCTC+TGG + Chr1:82015964-82015983 None:intergenic 30.0%
TCTGGTACAAAGTTCATTAA+TGG + Chr1:82016546-82016565 None:intergenic 30.0%
TTGAACTCTCTGATTTCAAA+AGG + Chr1:82015993-82016012 None:intergenic 30.0%
TTGTTGCAGCAAAAAGAATT+AGG + Chr1:82016318-82016337 None:intergenic 30.0%
! AAAAGCATATGCAATGGAAA+TGG - Chr1:82016065-82016084 MsG0180004743.01.T01:CDS 30.0%
! AACTTTGTACCAGATAGTTT+TGG - Chr1:82016552-82016571 MsG0180004743.01.T01:CDS 30.0%
! AGTAGTTTTTCATCTTCTTC+TGG + Chr1:82015315-82015334 None:intergenic 30.0%
! ATTTCCATTGCATATGCTTT+TGG + Chr1:82016066-82016085 None:intergenic 30.0%
! TTCATTTTCTTCTTACCAGA+TGG - Chr1:82015764-82015783 MsG0180004743.01.T01:CDS 30.0%
!!! CCCTTTTTTATTTTCTCCTA+TGG - Chr1:82015649-82015668 MsG0180004743.01.T01:CDS 30.0%
ATGGTTGTTGATGTTGATGT+GGG + Chr1:82016288-82016307 None:intergenic 35.0%
ATTCAACCCTCAGATTTGAT+GGG - Chr1:82016126-82016145 MsG0180004743.01.T01:CDS 35.0%
CAAACACTAGTAGTAACCAT+TGG - Chr1:82016208-82016227 MsG0180004743.01.T01:intron 35.0%
CAGAAGCCAACATTAAGATA+GGG + Chr1:82016497-82016516 None:intergenic 35.0%
CTGAGGCATATAACAAAGTA+TGG - Chr1:82015333-82015352 MsG0180004743.01.T01:CDS 35.0%
GGTACAAAGTTCATTAATGG+AGG + Chr1:82016543-82016562 None:intergenic 35.0%
TCAGAAGCCAACATTAAGAT+AGG + Chr1:82016498-82016517 None:intergenic 35.0%
TCTGTAGAAACATTGTCAGA+GGG + Chr1:82016354-82016373 None:intergenic 35.0%
TCTTGTTCTTGCTTTGTATG+AGG + Chr1:82016588-82016607 None:intergenic 35.0%
TTATCAGGTTTGCAAAGATG+TGG - Chr1:82015487-82015506 MsG0180004743.01.T01:CDS 35.0%
TTATTCTCAACCTCAGACAA+TGG + Chr1:82015904-82015923 None:intergenic 35.0%
TTGAACTTCATGCAGTACTA+GGG - Chr1:82015596-82015615 MsG0180004743.01.T01:CDS 35.0%
! AACAATTTTTCTTCTTGGGG+AGG - Chr1:82016411-82016430 MsG0180004743.01.T01:CDS 35.0%
! TTCACCAAAAGCATATGCAA+TGG - Chr1:82016059-82016078 MsG0180004743.01.T01:CDS 35.0%
! TTGTCTGAGGTTGAGAATAA+TGG - Chr1:82015904-82015923 MsG0180004743.01.T01:CDS 35.0%
AAGAAGAGACTGAGGCAAAA+AGG - Chr1:82015856-82015875 MsG0180004743.01.T01:CDS 40.0%
AAGAGGAACATTCTCACAAG+AGG - Chr1:82015558-82015577 MsG0180004743.01.T01:CDS 40.0%
AGAAGCTTAGGAAAGGTCTA+TGG - Chr1:82015286-82015305 MsG0180004743.01.T01:CDS 40.0%
CAAAGTATGGTCATGGATGT+TGG - Chr1:82015346-82015365 MsG0180004743.01.T01:CDS 40.0%
CATGGTTGTTGATGTTGATG+TGG + Chr1:82016289-82016308 None:intergenic 40.0%
CATTCAACCCTCAGATTTGA+TGG - Chr1:82016125-82016144 MsG0180004743.01.T01:CDS 40.0%
CTCTGTAGAAACATTGTCAG+AGG + Chr1:82016355-82016374 None:intergenic 40.0%
CTTGTTTGAAGAAGAGACTG+AGG - Chr1:82015848-82015867 MsG0180004743.01.T01:CDS 40.0%
GACAATGGTTTATGAGTCAC+AGG + Chr1:82015889-82015908 None:intergenic 40.0%
GACTCATAAACCATTGTCTG+AGG - Chr1:82015891-82015910 MsG0180004743.01.T01:CDS 40.0%
GCATATGCAATGGAAATGGA+AGG - Chr1:82016069-82016088 MsG0180004743.01.T01:CDS 40.0%
GTTGAACTTCATGCAGTACT+AGG - Chr1:82015595-82015614 MsG0180004743.01.T01:CDS 40.0%
GTTGTTACAAGCAGAAGCTT+AGG - Chr1:82015274-82015293 MsG0180004743.01.T01:CDS 40.0%
TACAAGCAGAAGCTTAGGAA+AGG - Chr1:82015279-82015298 MsG0180004743.01.T01:CDS 40.0%
TACCAGATGGTCTCAAATTG+CGG - Chr1:82015777-82015796 MsG0180004743.01.T01:CDS 40.0%
TCTGAGTTTCTGAATGTCCT+TGG + Chr1:82016640-82016659 None:intergenic 40.0%
TTCATGCAGTACTAGGGAAT+AGG - Chr1:82015602-82015621 MsG0180004743.01.T01:CDS 40.0%
TTCCAGTTTGGTTGAACCAA+TGG + Chr1:82016227-82016246 None:intergenic 40.0%
TTTCTCCTATGGTTAGGCAA+CGG - Chr1:82015660-82015679 MsG0180004743.01.T01:CDS 40.0%
! CAGAAACTCAGAGAAGCTTT+TGG - Chr1:82016648-82016667 MsG0180004743.01.T01:CDS 40.0%
! TGAGGTTGAGAATAATGGAG+AGG - Chr1:82015909-82015928 MsG0180004743.01.T01:CDS 40.0%
!! AACCATTGGTTCAACCAAAC+TGG - Chr1:82016222-82016241 MsG0180004743.01.T01:intron 40.0%
AAAGATGTGGTAAGAGCTGC+AGG - Chr1:82015500-82015519 MsG0180004743.01.T01:CDS 45.0%
AGTTCAGTACCTAAGCAAGC+AGG - Chr1:82015369-82015388 MsG0180004743.01.T01:CDS 45.0%
ATTTCATTGTCTGTCCTCCC+CGG + Chr1:82015811-82015830 None:intergenic 45.0%
CGAGGATTCGATCTCACTAT+CGG - Chr1:82015697-82015716 MsG0180004743.01.T01:CDS 45.0%
TCAAATTGCGGCGCAATTAC+CGG - Chr1:82015789-82015808 MsG0180004743.01.T01:CDS 45.0%
TTCTTCTTGGGGAGGATTGA+TGG - Chr1:82016419-82016438 MsG0180004743.01.T01:CDS 45.0%
AAATTGCGGCGCAATTACCG+GGG - Chr1:82015791-82015810 MsG0180004743.01.T01:CDS 50.0%
ACGGAGTGATAAGGAAGTCG+AGG - Chr1:82015679-82015698 MsG0180004743.01.T01:CDS 50.0%
CAAATTGCGGCGCAATTACC+GGG - Chr1:82015790-82015809 MsG0180004743.01.T01:CDS 50.0%
GGTTAGGCAACGGAGTGATA+AGG - Chr1:82015670-82015689 MsG0180004743.01.T01:CDS 50.0%
TCACTCCGTTGCCTAACCAT+AGG + Chr1:82015668-82015687 None:intergenic 50.0%
GTAAGAGCTGCAGGCTAAGG+TGG - Chr1:82015509-82015528 MsG0180004743.01.T01:CDS 55.0%
GTGGTAAGAGCTGCAGGCTA+AGG - Chr1:82015506-82015525 MsG0180004743.01.T01:CDS 55.0%
! CGCCGCAATTTGAGACCATC+TGG + Chr1:82015782-82015801 None:intergenic 55.0%
TTGCGGCGCAATTACCGGGG+AGG - Chr1:82015794-82015813 MsG0180004743.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 82015258 82016680 82015258 ID=MsG0180004743.01;Name=MsG0180004743.01
Chr1 mRNA 82015258 82016680 82015258 ID=MsG0180004743.01.T01;Parent=MsG0180004743.01;Name=MsG0180004743.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|1|1|3|0|386
Chr1 exon 82016548 82016680 82016548 ID=MsG0180004743.01.T01:exon:34787;Parent=MsG0180004743.01.T01
Chr1 exon 82016315 82016444 82016315 ID=MsG0180004743.01.T01:exon:34786;Parent=MsG0180004743.01.T01
Chr1 exon 82015258 82016155 82015258 ID=MsG0180004743.01.T01:exon:34785;Parent=MsG0180004743.01.T01
Chr1 CDS 82016548 82016680 82016548 ID=MsG0180004743.01.T01:cds;Parent=MsG0180004743.01.T01
Chr1 CDS 82016315 82016444 82016315 ID=MsG0180004743.01.T01:cds;Parent=MsG0180004743.01.T01
Chr1 CDS 82015258 82016155 82015258 ID=MsG0180004743.01.T01:cds;Parent=MsG0180004743.01.T01
Gene Sequence

>MsG0180004743.01.T01

ATGGGAAGGCACTCATGTTGTTACAAGCAGAAGCTTAGGAAAGGTCTATGGTCACCAGAAGAAGATGAAAAACTACTGAGGCATATAACAAAGTATGGTCATGGATGTTGGAGTTCAGTACCTAAGCAAGCAGGTTTGCAAAGATGTGGTAAGAGCTGCAGGCTAAGGTGGATCAATTACTTAAGACCTGATTTAAAAAGAGGAACATTCTCACAAGAGGAAGAAAATCTCATTGTTGAACTTCATGCAGTACTAGGGAATAGATGGTCTCAAATTGCGGCGCAATTACCGGGGAGGACAGACAATGAAATAAAGAATCTATGGAATTCTTGTTTGAAGAAGAGACTGAGGCAAAAAGGTATAGATCCTGTGACTCATAAACCATTGTCTGAGGTTGAGAATAATGGAGAGGAAAATGCTAATAAGAGTCAAGAGAAAGCACCAGAGATATTACTATCCAATGAATTGAACCTTTTGAAATCAGAGAGTTCAAAATCTGATGCAGCTTCTAGCTATGAGCAAAGAACAACATCTTCAATTTCACCAAAAGCATATGCAATGGAAATGGAAGGTTCTTGCAACAAAGAGTTTTTCATAGATAGGTTCATTCAACCCTCAGATTTGATGGGAAATTATCCCCTTCAAATGAGTTATACAAACACTGAAAATGATTGTTTACCAAATGATTCAAACACTAGTAGTAACCATTGGTTCAACCAAACTGGAAAATCTTTTGATATGAATTCTGATCAGTTTCATTTCAATCCCACATCAACATCAACAACCATGTTTCTTCCTAATTCTTTTTGCTGCAACAATTCTCTTGATATTCCCTCTGACAATGTTTCTACAGAGATGAGAACTAGCAGCAGCACCTTAAACTTACATAACAACAATTTTTCTTCTTGGGGAGGATTGATGGAAAATCATACAGAAGAAGCTAAATGGGATAATAACAATAACTACTTTCAAAACCCTATCTTAATGTTGGCTTCTGAGTCTTTATGCAATGAGATAAAGCCTCCATTAATGAACTTTGTACCAGATAGTTTTGGAGCTATTTTACCTCATACAAAGCAAGAACAAGAACAGTCACAAACAACTTCTAATATATTTTCCAAGGACATTCAGAAACTCAGAGAAGCTTTTGGAGATATGTGA

Protein sequence

>MsG0180004743.01.T01

MGRHSCCYKQKLRKGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGTFSQEEENLIVELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKRLRQKGIDPVTHKPLSEVENNGEENANKSQEKAPEILLSNELNLLKSESSKSDAASSYEQRTTSSISPKAYAMEMEGSCNKEFFIDRFIQPSDLMGNYPLQMSYTNTENDCLPNDSNTSSNHWFNQTGKSFDMNSDQFHFNPTSTSTTMFLPNSFCCNNSLDIPSDNVSTEMRTSSSTLNLHNNNFSSWGGLMENHTEEAKWDNNNNYFQNPILMLASESLCNEIKPPLMNFVPDSFGAILPHTKQEQEQSQTTSNIFSKDIQKLREAFGDM*