Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0053570 | XP_003588965.1 | 99.533 | 214 | 1 | 0 | 1 | 214 | 1 | 214 | 5.11e-155 | 438 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0053570 | sp|Q84MC2|LOG8_ARATH | 79.343 | 213 | 43 | 1 | 1 | 212 | 1 | 213 | 2.25e-125 | 355 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0053570 | G7I9V5 | 99.533 | 214 | 1 | 0 | 1 | 214 | 1 | 214 | 2.44e-155 | 438 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006880 | Msa0053570 | 0.800841 | 1.192677e-48 | -8.615850e-47 |
| Msa0021810 | Msa0053570 | 0.815818 | 7.609162e-52 | -8.615850e-47 |
| Msa0053570 | Msa0076000 | 0.807073 | 6.038394e-50 | -8.615850e-47 |
| Msa0053570 | Msa0082280 | 0.802182 | 6.333630e-49 | -8.615850e-47 |
| Msa0053570 | Msa0099190 | 0.983543 | 4.972005e-158 | -8.615850e-47 |
| Msa0053570 | Msa0143430 | 0.810736 | 9.936278e-51 | -8.615850e-47 |
| Msa0053570 | Msa0174770 | 0.806751 | 7.063524e-50 | -8.615850e-47 |
| Msa0053570 | Msa0186890 | 0.804626 | 1.974140e-49 | -8.615850e-47 |
| Msa0053570 | Msa0222920 | 0.833993 | 3.874020e-56 | -8.615850e-47 |
| Msa0053570 | Msa0242680 | 0.817161 | 3.806802e-52 | -8.615850e-47 |
| Msa0053570 | Msa0264350 | 0.824595 | 7.411386e-54 | -8.615850e-47 |
| Msa0053570 | Msa0291520 | 0.808167 | 3.537612e-50 | -8.615850e-47 |
| Msa0053570 | Msa0294390 | 0.803042 | 4.209965e-49 | -8.615850e-47 |
| Msa0053570 | Msa0302450 | 0.830371 | 3.049082e-55 | -8.615850e-47 |
| Msa0053570 | Msa0355270 | 0.817695 | 2.886024e-52 | -8.615850e-47 |
| Msa0053570 | Msa0363620 | 0.806783 | 6.956150e-50 | -8.615850e-47 |
| Msa0053570 | Msa0392940 | 0.812520 | 4.068629e-51 | -8.615850e-47 |
| Msa0053570 | Msa0394400 | 0.808653 | 2.787107e-50 | -8.615850e-47 |
| Msa0053570 | Msa0402330 | 0.806377 | 8.471483e-50 | -8.615850e-47 |
| Msa0053570 | Msa0413450 | 0.813763 | 2.170601e-51 | -8.615850e-47 |
| Msa0053570 | Msa0416400 | 0.814680 | 1.362075e-51 | -8.615850e-47 |
| Msa0053570 | Msa0469910 | -0.804628 | 1.971792e-49 | -8.615850e-47 |
| Msa0053570 | Msa0505150 | 0.814748 | 1.315796e-51 | -8.615850e-47 |
| Msa0053570 | Msa0541860 | 0.804408 | 2.191082e-49 | -8.615850e-47 |
| Msa0053570 | Msa0542160 | 0.801018 | 1.097225e-48 | -8.615850e-47 |
| Msa0053570 | Msa0552810 | 0.809225 | 2.102431e-50 | -8.615850e-47 |
| Msa0053570 | Msa0639120 | 0.801730 | 7.844428e-49 | -8.615850e-47 |
| Msa0053570 | Msa0687630 | 0.834800 | 2.431245e-56 | -8.615850e-47 |
| Msa0053570 | Msa0692080 | 0.811796 | 5.851167e-51 | -8.615850e-47 |
| Msa0053570 | Msa0702340 | 0.827856 | 1.241480e-54 | -8.615850e-47 |
| Msa0053570 | Msa0702590 | 0.814762 | 1.306372e-51 | -8.615850e-47 |
| Msa0053570 | Msa0702660 | 0.826167 | 3.146861e-54 | -8.615850e-47 |
| Msa0053570 | Msa0703230 | 0.801530 | 8.621358e-49 | -8.615850e-47 |
| Msa0053570 | Msa0750920 | 0.825259 | 5.167233e-54 | -8.615850e-47 |
| Msa0053570 | Msa0824640 | 0.816738 | 4.737095e-52 | -8.615850e-47 |
| Msa0053570 | Msa0864010 | 0.817853 | 2.658608e-52 | -8.615850e-47 |
| Msa0053570 | Msa0953150 | 0.803623 | 3.191352e-49 | -8.615850e-47 |
| Msa0053570 | Msa0966270 | 0.853034 | 3.119752e-61 | -8.615850e-47 |
| Msa0053570 | Msa1040890 | 0.809372 | 1.954525e-50 | -8.615850e-47 |
| Msa0053570 | Msa1082700 | 0.851679 | 7.585779e-61 | -8.615850e-47 |
| Msa0053570 | Msa1083210 | 0.812646 | 3.818617e-51 | -8.615850e-47 |
| Msa0053570 | Msa1126770 | 0.813265 | 2.793689e-51 | -8.615850e-47 |
| Msa0053570 | Msa1127830 | 0.817076 | 3.976744e-52 | -8.615850e-47 |
| Msa0053570 | Msa1127890 | 0.806894 | 6.590966e-50 | -8.615850e-47 |
| Msa0053570 | Msa1184370 | 0.818492 | 1.905312e-52 | -8.615850e-47 |
| Msa0053570 | Msa1201830 | 0.813365 | 2.656450e-51 | -8.615850e-47 |
| Msa0053570 | Msa1208890 | -0.808709 | 2.711194e-50 | -8.615850e-47 |
| Msa0053570 | Msa1224840 | 0.823861 | 1.102601e-53 | -8.615850e-47 |
| Msa0053570 | Msa1227690 | 0.817677 | 2.912575e-52 | -8.615850e-47 |
| Msa0053570 | Msa1254710 | 0.811768 | 5.933810e-51 | -8.615850e-47 |
| Msa0053570 | Msa1259070 | -0.800603 | 1.333963e-48 | -8.615850e-47 |
| Msa0053570 | Msa1292830 | 0.811434 | 7.014312e-51 | -8.615850e-47 |
| Msa0053570 | Msa1294840 | 0.806592 | 7.634637e-50 | -8.615850e-47 |
| Msa0053570 | Msa1307950 | 0.823236 | 1.543701e-53 | -8.615850e-47 |
| Msa0053570 | Msa1316830 | 0.806458 | 8.147328e-50 | -8.615850e-47 |
| Msa0053570 | Msa1365150 | 0.831404 | 1.701746e-55 | -8.615850e-47 |
| Msa0053570 | Msa1367880 | 0.819961 | 8.821238e-53 | -8.615850e-47 |
| Msa0053570 | Msa1370860 | 0.812284 | 4.580320e-51 | -8.615850e-47 |
| Msa0053570 | Msa1373330 | 0.809496 | 1.838872e-50 | -8.615850e-47 |
| Msa0053570 | Msa1385070 | 0.959677 | 1.048443e-117 | -8.615850e-47 |
| Msa0053570 | Msa1397810 | 0.800928 | 1.145054e-48 | -8.615850e-47 |
| Msa0053570 | Msa1400610 | -0.808362 | 3.214408e-50 | -8.615850e-47 |
| Msa0053570 | Msa1404190 | 0.816064 | 6.704631e-52 | -8.615850e-47 |
| Msa0053570 | Msa1435750 | 0.802321 | 5.931120e-49 | -8.615850e-47 |
| Msa0053570 | Msa1438640 | 0.824641 | 7.230194e-54 | -8.615850e-47 |
| Msa0053570 | Msa1442850 | 0.856728 | 2.644594e-62 | -8.615850e-47 |
| Msa0053570 | Msa1465080 | 0.820287 | 7.428984e-53 | -8.615850e-47 |
| Msa0053570 | Msa1466990 | 0.820681 | 6.032546e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0053570 | MtrunA17_Chr1g0151201 | 98.611 | 216 | 1 | 1 | 1 | 214 | 1 | 216 | 3.90e-157 | 433 |
| Msa0053570 | MtrunA17_Chr1g0181131 | 66.990 | 206 | 68 | 0 | 7 | 212 | 11 | 216 | 2.16e-103 | 297 |
| Msa0053570 | MtrunA17_Chr7g0264181 | 67.327 | 202 | 66 | 0 | 7 | 208 | 12 | 213 | 9.58e-103 | 296 |
| Msa0053570 | MtrunA17_Chr2g0326841 | 68.687 | 198 | 62 | 0 | 7 | 204 | 11 | 208 | 1.23e-102 | 295 |
| Msa0053570 | MtrunA17_Chr4g0028871 | 69.036 | 197 | 61 | 0 | 8 | 204 | 12 | 208 | 2.34e-102 | 294 |
| Msa0053570 | MtrunA17_Chr3g0142491 | 69.036 | 197 | 61 | 0 | 7 | 203 | 13 | 209 | 8.73e-101 | 291 |
| Msa0053570 | MtrunA17_Chr1g0177391 | 62.441 | 213 | 79 | 1 | 1 | 213 | 1 | 212 | 7.82e-98 | 283 |
| Msa0053570 | MtrunA17_Chr1g0156401 | 58.929 | 112 | 25 | 1 | 36 | 126 | 1 | 112 | 9.91e-39 | 129 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0053570 | AT5G11950.1 | 79.343 | 213 | 43 | 1 | 1 | 212 | 1 | 213 | 2.29e-126 | 355 |
| Msa0053570 | AT5G11950.2 | 79.343 | 213 | 43 | 1 | 1 | 212 | 1 | 213 | 2.29e-126 | 355 |
| Msa0053570 | AT5G11950.3 | 79.343 | 213 | 43 | 1 | 1 | 212 | 1 | 213 | 2.29e-126 | 355 |
| Msa0053570 | AT2G28305.1 | 69.756 | 205 | 62 | 0 | 7 | 211 | 6 | 210 | 1.76e-107 | 308 |
| Msa0053570 | AT2G37210.1 | 65.854 | 205 | 69 | 1 | 7 | 211 | 12 | 215 | 2.25e-103 | 297 |
| Msa0053570 | AT5G06300.1 | 63.551 | 214 | 77 | 1 | 1 | 213 | 1 | 214 | 4.14e-101 | 292 |
| Msa0053570 | AT3G53450.1 | 66.162 | 198 | 67 | 0 | 7 | 204 | 12 | 209 | 6.59e-100 | 289 |
| Msa0053570 | AT2G37210.2 | 58.515 | 229 | 70 | 2 | 7 | 211 | 12 | 239 | 2.36e-97 | 283 |
| Msa0053570 | AT2G28305.3 | 73.034 | 178 | 48 | 0 | 7 | 184 | 6 | 183 | 7.38e-97 | 280 |
| Msa0053570 | AT5G11950.4 | 81.875 | 160 | 29 | 0 | 53 | 212 | 1 | 160 | 5.74e-96 | 277 |
| Msa0053570 | AT2G35990.1 | 62.500 | 200 | 75 | 0 | 1 | 200 | 1 | 200 | 7.60e-95 | 276 |
| Msa0053570 | AT5G03270.1 | 66.310 | 187 | 63 | 0 | 5 | 191 | 15 | 201 | 2.43e-93 | 271 |
| Msa0053570 | AT4G35190.1 | 62.069 | 203 | 77 | 0 | 1 | 203 | 1 | 203 | 1.09e-91 | 268 |
| Msa0053570 | AT5G03270.2 | 67.033 | 182 | 60 | 0 | 5 | 186 | 15 | 196 | 5.34e-91 | 265 |
| Msa0053570 | AT4G35190.2 | 63.918 | 194 | 68 | 1 | 1 | 194 | 1 | 192 | 1.63e-87 | 257 |
| Msa0053570 | AT2G28305.2 | 73.134 | 134 | 36 | 0 | 7 | 140 | 6 | 139 | 4.68e-71 | 213 |
| Msa0053570 | AT2G35990.3 | 60.135 | 148 | 59 | 0 | 53 | 200 | 1 | 148 | 2.42e-64 | 196 |
| Msa0053570 | AT2G35990.2 | 60.135 | 148 | 59 | 0 | 53 | 200 | 1 | 148 | 2.42e-64 | 196 |
| Msa0053570 | AT5G26140.2 | 66.225 | 151 | 29 | 1 | 80 | 208 | 6 | 156 | 3.18e-62 | 191 |
| Msa0053570 | AT5G26140.1 | 63.504 | 137 | 28 | 1 | 94 | 208 | 1 | 137 | 7.09e-53 | 167 |
| Msa0053570 | AT5G26140.3 | 69.608 | 102 | 31 | 0 | 107 | 208 | 21 | 122 | 2.81e-46 | 149 |
Find 77 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGAACATAGATTTGGTTTA+TGG | 0.161614 | 1_2:+8020899 | Msa0053570:CDS |
| CATCTTCAACATAAGTTCTT+TGG | 0.223030 | 1_2:-8022409 | None:intergenic |
| TGGAACTATGGAAGAGCTTC+TGG | 0.266363 | 1_2:+8022140 | Msa0053570:CDS |
| TCCTCATAATCAGGAGGATA+TGG | 0.292672 | 1_2:+8022120 | Msa0053570:intron |
| TTTATCTGTAATTTAAAATC+TGG | 0.319881 | 1_2:-8023538 | None:intergenic |
| AATGGTGGTTGTCATGTTCT+AGG | 0.326103 | 1_2:+8020968 | Msa0053570:CDS |
| TCATGCGGCATGAGAGCTTT+TGG | 0.330366 | 1_2:-8021365 | None:intergenic |
| TGGTGGAAGTGTTGGATTGA+TGG | 0.341974 | 1_2:+8020922 | Msa0053570:CDS |
| CTTGTATACATTTCAAGTTA+TGG | 0.357366 | 1_2:-8023191 | None:intergenic |
| ACTGTAAGACAGTCAAAATT+TGG | 0.362300 | 1_2:+8023328 | Msa0053570:three_prime_UTR |
| ATAAGCTTGTAAACAACCTT+TGG | 0.365272 | 1_2:-8023587 | None:intergenic |
| GGTTAAGAGGAACATAGATT+TGG | 0.375088 | 1_2:+8020892 | Msa0053570:intron |
| CCAATGGAACAATAACAATA+AGG | 0.376120 | 1_2:-8020257 | None:intergenic |
| GGTGGAAGTGTTGGATTGAT+GGG | 0.382799 | 1_2:+8020923 | Msa0053570:CDS |
| CCTTATTGTTATTGTTCCAT+TGG | 0.383598 | 1_2:+8020257 | Msa0053570:five_prime_UTR |
| ACTGAAAACATGGCGGTTGC+CGG | 0.398415 | 1_2:-8020438 | None:intergenic |
| CATAGTAACAAAACAACATT+TGG | 0.403897 | 1_2:-8023231 | None:intergenic |
| ATCATGGCCAACCTAGAGTT+TGG | 0.407842 | 1_2:+8023560 | Msa0053570:three_prime_UTR |
| GAAATGTATACAAGAATTGC+TGG | 0.411965 | 1_2:+8023200 | Msa0053570:three_prime_UTR |
| GGTTTGTGTTTCAGGTTAAG+AGG | 0.417871 | 1_2:+8020879 | Msa0053570:intron |
| AGCTGGCAGATGAAGCAATT+AGG | 0.429412 | 1_2:+8023086 | Msa0053570:CDS |
| ATCAGGAGGATATGGAACTA+TGG | 0.439372 | 1_2:+8022128 | Msa0053570:intron |
| TTTAAATTACAGATAAATCA+TGG | 0.444755 | 1_2:+8023544 | Msa0053570:three_prime_UTR |
| ATAGATTTGGTTTATGGTGG+TGG | 0.456028 | 1_2:+8020905 | Msa0053570:CDS |
| AAGGAAGCAGAAAGTTCAAA+AGG | 0.460142 | 1_2:+8020390 | Msa0053570:CDS |
| AACATAGATTTGGTTTATGG+TGG | 0.467733 | 1_2:+8020902 | Msa0053570:CDS |
| GTTTATGGTGGTGGAAGTGT+TGG | 0.468866 | 1_2:+8020914 | Msa0053570:CDS |
| ATGCTTTATTTATAAATGAA+AGG | 0.471976 | 1_2:-8020294 | None:intergenic |
| ATGCAGAATGAAGCTTTGAT+TGG | 0.473098 | 1_2:+8023129 | Msa0053570:exon |
| AGCTTCTGGAGATGATAACT+TGG | 0.479259 | 1_2:+8022154 | Msa0053570:CDS |
| GTCTTCTGCGGCAGCAACTC+CGG | 0.499932 | 1_2:+8020419 | Msa0053570:CDS |
| TGGTTTGCCAAACTCTAGGT+TGG | 0.503294 | 1_2:-8023567 | None:intergenic |
| CCTTTGGTTTGCCAAACTCT+AGG | 0.503882 | 1_2:-8023571 | None:intergenic |
| ATGATAACTTGGGCTCAACT+TGG | 0.508240 | 1_2:+8022165 | Msa0053570:CDS |
| GACAACTATACTCCGAGCAC+TGG | 0.509009 | 1_2:-8022373 | None:intergenic |
| ATACAAGAATTGCTGGAGAT+GGG | 0.509329 | 1_2:+8023207 | Msa0053570:three_prime_UTR |
| CATGAGGGGCTACATGCTCA+TGG | 0.510740 | 1_2:-8023061 | None:intergenic |
| TATACAAGAATTGCTGGAGA+TGG | 0.513114 | 1_2:+8023206 | Msa0053570:three_prime_UTR |
| GTGAAGCAGTAGGTGAAGTA+AGG | 0.514214 | 1_2:+8021836 | Msa0053570:CDS |
| ATGGTGGTTGTCATGTTCTA+GGG | 0.515119 | 1_2:+8020969 | Msa0053570:CDS |
| TTCATCTGCCAGCTCTCATG+AGG | 0.517501 | 1_2:-8023077 | None:intergenic |
| AAGTTCATCTGCTAATTGAA+TGG | 0.518634 | 1_2:-8020468 | None:intergenic |
| GTTGGCCTACTGAATGTTGA+TGG | 0.518897 | 1_2:+8022291 | Msa0053570:CDS |
| TCATCTGCCAGCTCTCATGA+GGG | 0.519557 | 1_2:-8023076 | None:intergenic |
| TTTGACAATGGTGTTGAAGA+AGG | 0.519647 | 1_2:+8022339 | Msa0053570:CDS |
| CAGAATGAAGCTTTGATTGG+TGG | 0.526120 | 1_2:+8023132 | Msa0053570:exon |
| CAAAGAACTTATGTTGAAGA+TGG | 0.528044 | 1_2:+8022410 | Msa0053570:CDS |
| TTGCTTGCATTGTTTGACAA+TGG | 0.530752 | 1_2:+8022327 | Msa0053570:CDS |
| AGGAAGCAGAAAGTTCAAAA+GGG | 0.552817 | 1_2:+8020391 | Msa0053570:CDS |
| AAAATCTGGTCACAACATAG+TGG | 0.555483 | 1_2:-8023524 | None:intergenic |
| AGAACTTATGTTGAAGATGG+AGG | 0.558261 | 1_2:+8022413 | Msa0053570:CDS |
| ATGAAGCTTTGATTGGTGGA+AGG | 0.560276 | 1_2:+8023136 | Msa0053570:exon |
| ATGTAGCCCCTCATGAGAGC+TGG | 0.566155 | 1_2:+8023069 | Msa0053570:CDS |
| CAGATATCTGGTGAAGCAGT+AGG | 0.570380 | 1_2:+8021826 | Msa0053570:intron |
| TGCAATGGCTCAAGAAGCTG+AGG | 0.570924 | 1_2:+8021888 | Msa0053570:CDS |
| GGAAAGTAATGTAACACCAA+TGG | 0.572209 | 1_2:-8020273 | None:intergenic |
| AAGCAATTAGGCAATTATCC+AGG | 0.578634 | 1_2:+8023098 | Msa0053570:CDS |
| TGCTCTAATATCTACTGAGG+TGG | 0.580742 | 1_2:+8023499 | Msa0053570:three_prime_UTR |
| GAGGCATTTATTGCACTCCC+TGG | 0.581953 | 1_2:+8021907 | Msa0053570:CDS |
| CCTAGAGTTTGGCAAACCAA+AGG | 0.589779 | 1_2:+8023571 | Msa0053570:three_prime_UTR |
| TACAAGAATTGCTGGAGATG+GGG | 0.592741 | 1_2:+8023208 | Msa0053570:three_prime_UTR |
| ACAACTATACTCCGAGCACT+GGG | 0.596880 | 1_2:-8022372 | None:intergenic |
| TGGCGGCGTCACTGAAAACA+TGG | 0.602579 | 1_2:-8020448 | None:intergenic |
| GCATGAGAGAAAAGCTGCAA+TGG | 0.603274 | 1_2:+8021873 | Msa0053570:CDS |
| ATGAGGGGCTACATGCTCAT+GGG | 0.605666 | 1_2:-8023060 | None:intergenic |
| AAAAGCTCTCATGCCGCATG+AGG | 0.606750 | 1_2:+8021367 | Msa0053570:CDS |
| CATCTGCCAGCTCTCATGAG+GGG | 0.620200 | 1_2:-8023075 | None:intergenic |
| AGTAACCATCAACATTCAGT+AGG | 0.622543 | 1_2:-8022296 | None:intergenic |
| GCTTCTGGAGATGATAACTT+GGG | 0.623818 | 1_2:+8022155 | Msa0053570:CDS |
| GCTTCATTAAGCCCAGTGCT+CGG | 0.625476 | 1_2:+8022361 | Msa0053570:CDS |
| GGGGCTACATGCTCATGGGA+AGG | 0.637642 | 1_2:-8023056 | None:intergenic |
| TACAAGCTTATGACAATGAG+TGG | 0.651411 | 1_2:+8023599 | Msa0053570:three_prime_UTR |
| AGTAGCACAAATACCTCATG+CGG | 0.657014 | 1_2:-8021380 | None:intergenic |
| TTCATCTGCTAATTGAATGG+CGG | 0.661275 | 1_2:-8020465 | None:intergenic |
| AATTGCTCTAATATCTACTG+AGG | 0.684860 | 1_2:+8023496 | Msa0053570:three_prime_UTR |
| AAAAGGGTATGTGTCTTCTG+CGG | 0.690009 | 1_2:+8020407 | Msa0053570:CDS |
| CGGCGTCACTGAAAACATGG+CGG | 0.784838 | 1_2:-8020445 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAATAATAATAATAATA+AGG | - | chr1_2:8022463-8022482 | None:intergenic | 0.0% |
| !! | TATTATTATTATTATGTGAA+AGG | + | chr1_2:8022493-8022512 | Msa0053570:intron | 10.0% |
| !!! | ATGCTTTATTTATAAATGAA+AGG | - | chr1_2:8020297-8020316 | None:intergenic | 15.0% |
| !!! | ATTGTATTTTTCTTAATCTT+TGG | + | chr1_2:8020532-8020551 | Msa0053570:intron | 15.0% |
| !!! | TTTTTATATAAAAGTGTATC+TGG | + | chr1_2:8020601-8020620 | Msa0053570:intron | 15.0% |
| !!! | TTTTATATAAAAGTGTATCT+GGG | + | chr1_2:8020602-8020621 | Msa0053570:intron | 15.0% |
| !!! | TTTTTATGTGTTTTGTTTTA+TGG | + | chr1_2:8020858-8020877 | Msa0053570:intron | 15.0% |
| !! | ATATCTCAAAAAATGTATAA+TGG | + | chr1_2:8020950-8020969 | Msa0053570:CDS | 15.0% |
| !! | TAATAATAATAAGGTAAAAG+TGG | - | chr1_2:8022454-8022473 | None:intergenic | 15.0% |
| !!! | TTTTGAATCATTTCATTTAT+TGG | + | chr1_2:8023294-8023313 | Msa0053570:three_prime_UTR | 15.0% |
| !!! | TTTATCTGTAATTTAAAATC+TGG | - | chr1_2:8023541-8023560 | None:intergenic | 15.0% |
| !! | TTTAAATTACAGATAAATCA+TGG | + | chr1_2:8023544-8023563 | Msa0053570:three_prime_UTR | 15.0% |
| !!! | TTCTTTTTTTTTTCTCTTTG+TGG | - | chr1_2:8020333-8020352 | None:intergenic | 20.0% |
| !!! | AGAGAATATTTGCTTTTTTT+GGG | + | chr1_2:8020639-8020658 | Msa0053570:intron | 20.0% |
| !! | ATAAGTGTTTATATGCTATA+AGG | - | chr1_2:8021079-8021098 | None:intergenic | 20.0% |
| !!! | CTTGTAATTTCTTATTTGTA+TGG | - | chr1_2:8021592-8021611 | None:intergenic | 20.0% |
| !! | TTGGATAAACAACTTAATTA+AGG | + | chr1_2:8022615-8022634 | Msa0053570:intron | 20.0% |
| !! | TGGATAAACAACTTAATTAA+GGG | + | chr1_2:8022616-8022635 | Msa0053570:intron | 20.0% |
| !! | AATAAGCTTAAAACATCTTA+TGG | + | chr1_2:8022711-8022730 | Msa0053570:intron | 20.0% |
| !!! | AACTTTTTGAGTTTGAAAAT+TGG | - | chr1_2:8022937-8022956 | None:intergenic | 20.0% |
| !! | TCTGATATTGTGTTAATTAA+AGG | + | chr1_2:8022995-8023014 | Msa0053570:intron | 20.0% |
| !!! | AAGAAAGAATCGATTTTGAA+TGG | + | chr1_2:8020364-8020383 | Msa0053570:exon | 25.0% |
| !!! | CAGAGAATATTTGCTTTTTT+TGG | + | chr1_2:8020638-8020657 | Msa0053570:intron | 25.0% |
| ! | AAACATTAACATTTCACACA+TGG | - | chr1_2:8020773-8020792 | None:intergenic | 25.0% |
| ! | TCTCAAAAAATGTATAATGG+TGG | + | chr1_2:8020953-8020972 | Msa0053570:CDS | 25.0% |
| ! | AATAACACAGATCTTACAAA+GGG | - | chr1_2:8021294-8021313 | None:intergenic | 25.0% |
| !! | TTTGATAATACTTTATCGTC+TGG | + | chr1_2:8021501-8021520 | Msa0053570:intron | 25.0% |
| ! | TTATGACATTTGACAATCAA+AGG | + | chr1_2:8021534-8021553 | Msa0053570:intron | 25.0% |
| !!! | TTCTTTTATTTTTCGTGCAT+TGG | + | chr1_2:8022038-8022057 | Msa0053570:intron | 25.0% |
| !!! | TCTTTTATTTTTCGTGCATT+GGG | + | chr1_2:8022039-8022058 | Msa0053570:intron | 25.0% |
| ! | ACTTGGAATTCATAAAAAAC+CGG | + | chr1_2:8022182-8022201 | Msa0053570:CDS | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+GGG | - | chr1_2:8022612-8022631 | None:intergenic | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+AGG | - | chr1_2:8022613-8022632 | None:intergenic | 25.0% |
| !! | TTTTCATGAGACTTGATATA+GGG | - | chr1_2:8022799-8022818 | None:intergenic | 25.0% |
| !! | ATTTTCATGAGACTTGATAT+AGG | - | chr1_2:8022800-8022819 | None:intergenic | 25.0% |
| !! | TGTAGTGTGATAATGTTAAT+AGG | + | chr1_2:8022864-8022883 | Msa0053570:intron | 25.0% |
| ! | AGAGTAATGTAAATTACTGT+TGG | - | chr1_2:8022978-8022997 | None:intergenic | 25.0% |
| !!! | CTTGTATACATTTCAAGTTA+TGG | - | chr1_2:8023194-8023213 | None:intergenic | 25.0% |
| ! | CATAGTAACAAAACAACATT+TGG | - | chr1_2:8023234-8023253 | None:intergenic | 25.0% |
| !!! | TGTTGATTTTTATGAAGTGA+CGG | + | chr1_2:8023254-8023273 | Msa0053570:three_prime_UTR | 25.0% |
| !!! | AATCGAGAAATTTTAAGTTG+TGG | + | chr1_2:8023417-8023436 | Msa0053570:three_prime_UTR | 25.0% |
| !!! | ATCGAGAAATTTTAAGTTGT+GGG | + | chr1_2:8023418-8023437 | Msa0053570:three_prime_UTR | 25.0% |
| CCAATGGAACAATAACAATA+AGG | - | chr1_2:8020260-8020279 | None:intergenic | 30.0% | |
| ! | CCTTATTGTTATTGTTCCAT+TGG | + | chr1_2:8020257-8020276 | Msa0053570:five_prime_UTR | 30.0% |
| !! | AAAGAATCGATTTTGAATGG+AGG | + | chr1_2:8020367-8020386 | Msa0053570:exon | 30.0% |
| AAGTTCATCTGCTAATTGAA+TGG | - | chr1_2:8020471-8020490 | None:intergenic | 30.0% | |
| ! | ATATAAAAGTGTATCTGGGT+AGG | + | chr1_2:8020606-8020625 | Msa0053570:intron | 30.0% |
| ! | GTGTACAGAAACATTGATTA+AGG | + | chr1_2:8020820-8020839 | Msa0053570:intron | 30.0% |
| !! | TGTTTTATGGTTTGTGTTTC+AGG | + | chr1_2:8020871-8020890 | Msa0053570:intron | 30.0% |
| ! | AGGAACATAGATTTGGTTTA+TGG | + | chr1_2:8020899-8020918 | Msa0053570:CDS | 30.0% |
| ! | AACATAGATTTGGTTTATGG+TGG | + | chr1_2:8020902-8020921 | Msa0053570:CDS | 30.0% |
| ! | GTTGTTGATTGATATCACTT+TGG | + | chr1_2:8021024-8021043 | Msa0053570:intron | 30.0% |
| ATAAGTTGTTTATCCGAACA+GGG | - | chr1_2:8021050-8021069 | None:intergenic | 30.0% | |
| AATAAGTTGTTTATCCGAAC+AGG | - | chr1_2:8021051-8021070 | None:intergenic | 30.0% | |
| CAATAACACAGATCTTACAA+AGG | - | chr1_2:8021295-8021314 | None:intergenic | 30.0% | |
| AATGTAGAGTAGTACATATC+AGG | - | chr1_2:8021333-8021352 | None:intergenic | 30.0% | |
| ATGTACTACTCTACATTTAC+AGG | + | chr1_2:8021336-8021355 | Msa0053570:intron | 30.0% | |
| TGTACTACTCTACATTTACA+GGG | + | chr1_2:8021337-8021356 | Msa0053570:intron | 30.0% | |
| TAACACTATAACAGTTACAC+AGG | - | chr1_2:8021410-8021429 | None:intergenic | 30.0% | |
| !!! | CTATTGATTTTCGTTCTACA+CGG | + | chr1_2:8021443-8021462 | Msa0053570:intron | 30.0% |
| TTTGATCTCTAGCAATGAAT+TGG | + | chr1_2:8021472-8021491 | Msa0053570:intron | 30.0% | |
| AAATTACAAGAATGTTAGCG+AGG | + | chr1_2:8021602-8021621 | Msa0053570:intron | 30.0% | |
| AATTACAAGAATGTTAGCGA+GGG | + | chr1_2:8021603-8021622 | Msa0053570:intron | 30.0% | |
| ! | TCTTCTGATAATGACCTATT+TGG | + | chr1_2:8021689-8021708 | Msa0053570:intron | 30.0% |
| ! | CTTCTGATAATGACCTATTT+GGG | + | chr1_2:8021690-8021709 | Msa0053570:intron | 30.0% |
| CGAACTAACTACTATCATAA+AGG | - | chr1_2:8021732-8021751 | None:intergenic | 30.0% | |
| TCATCTTAGTATGCTGTAAT+TGG | + | chr1_2:8021793-8021812 | Msa0053570:intron | 30.0% | |
| !!! | GGTTTATTTTGACAGATATC+TGG | + | chr1_2:8021814-8021833 | Msa0053570:intron | 30.0% |
| ! | AACTCTTTGAAGAGTTATTC+AGG | - | chr1_2:8021938-8021957 | None:intergenic | 30.0% |
| AAGTAACATCATAACGTTAC+CGG | - | chr1_2:8022204-8022223 | None:intergenic | 30.0% | |
| !! | ACGTTATGATGTTACTTTGT+TGG | + | chr1_2:8022207-8022226 | Msa0053570:intron | 30.0% |
| ACTTTGTTGGATAAAATGCT+TGG | + | chr1_2:8022220-8022239 | Msa0053570:intron | 30.0% | |
| GGGTCAACATATGATTATAA+CGG | - | chr1_2:8022252-8022271 | None:intergenic | 30.0% | |
| CATCTTCAACATAAGTTCTT+TGG | - | chr1_2:8022412-8022431 | None:intergenic | 30.0% | |
| CAAAGAACTTATGTTGAAGA+TGG | + | chr1_2:8022410-8022429 | Msa0053570:CDS | 30.0% | |
| TGAAAATAACTTGACAGACA+TGG | - | chr1_2:8022654-8022673 | None:intergenic | 30.0% | |
| GAGTTTATTTGAAGAGCTTA+TGG | - | chr1_2:8022755-8022774 | None:intergenic | 30.0% | |
| !! | ATAGGAGTTTACTGTTTTTC+TGG | + | chr1_2:8022882-8022901 | Msa0053570:intron | 30.0% |
| GAAATGTATACAAGAATTGC+TGG | + | chr1_2:8023200-8023219 | Msa0053570:three_prime_UTR | 30.0% | |
| ACTGTAAGACAGTCAAAATT+TGG | + | chr1_2:8023328-8023347 | Msa0053570:three_prime_UTR | 30.0% | |
| ! | GTTGAAAGTGAAAAAGCATA+TGG | + | chr1_2:8023366-8023385 | Msa0053570:three_prime_UTR | 30.0% |
| !!! | TCGAGAAATTTTAAGTTGTG+GGG | + | chr1_2:8023419-8023438 | Msa0053570:three_prime_UTR | 30.0% |
| ! | GAGTTTATCTGACTTTTAGT+CGG | + | chr1_2:8023470-8023489 | Msa0053570:three_prime_UTR | 30.0% |
| ! | AGTTTATCTGACTTTTAGTC+GGG | + | chr1_2:8023471-8023490 | Msa0053570:three_prime_UTR | 30.0% |
| AATTGCTCTAATATCTACTG+AGG | + | chr1_2:8023496-8023515 | Msa0053570:three_prime_UTR | 30.0% | |
| ATAAGCTTGTAAACAACCTT+TGG | - | chr1_2:8023590-8023609 | None:intergenic | 30.0% | |
| GGAAAGTAATGTAACACCAA+TGG | - | chr1_2:8020276-8020295 | None:intergenic | 35.0% | |
| !! | AATCGATTTTGAATGGAGGA+AGG | + | chr1_2:8020371-8020390 | Msa0053570:exon | 35.0% |
| AAGGAAGCAGAAAGTTCAAA+AGG | + | chr1_2:8020390-8020409 | Msa0053570:CDS | 35.0% | |
| AGGAAGCAGAAAGTTCAAAA+GGG | + | chr1_2:8020391-8020410 | Msa0053570:CDS | 35.0% | |
| TTCATCTGCTAATTGAATGG+CGG | - | chr1_2:8020468-8020487 | None:intergenic | 35.0% | |
| GGTTAAGAGGAACATAGATT+TGG | + | chr1_2:8020892-8020911 | Msa0053570:intron | 35.0% | |
| ! | ATAGATTTGGTTTATGGTGG+TGG | + | chr1_2:8020905-8020924 | Msa0053570:CDS | 35.0% |
| TACAAAGGGTCTGTTTGAAT+AGG | - | chr1_2:8021280-8021299 | None:intergenic | 35.0% | |
| GTATGTTAGGGTAATGTCAA+TGG | + | chr1_2:8021631-8021650 | Msa0053570:intron | 35.0% | |
| ! | GAGCAAATTTTCTCCCAAAT+AGG | - | chr1_2:8021706-8021725 | None:intergenic | 35.0% |
| TGATAGTAGTTAGTTCGTCA+TGG | + | chr1_2:8021735-8021754 | Msa0053570:intron | 35.0% | |
| GAGTTATTCAGGTAATACCA+GGG | - | chr1_2:8021927-8021946 | None:intergenic | 35.0% | |
| AGAGTTATTCAGGTAATACC+AGG | - | chr1_2:8021928-8021947 | None:intergenic | 35.0% | |
| ! | AATGGAGGGTATGAGAAAAA+AGG | - | chr1_2:8022097-8022116 | None:intergenic | 35.0% |
| GATTATGAGGATAGAATGGA+GGG | - | chr1_2:8022111-8022130 | None:intergenic | 35.0% | |
| TGATTATGAGGATAGAATGG+AGG | - | chr1_2:8022112-8022131 | None:intergenic | 35.0% | |
| TCCATTCTATCCTCATAATC+AGG | + | chr1_2:8022111-8022130 | Msa0053570:intron | 35.0% | |
| TCCTGATTATGAGGATAGAA+TGG | - | chr1_2:8022115-8022134 | None:intergenic | 35.0% | |
| ATTCTATCCTCATAATCAGG+AGG | + | chr1_2:8022114-8022133 | Msa0053570:intron | 35.0% | |
| AGTAACCATCAACATTCAGT+AGG | - | chr1_2:8022299-8022318 | None:intergenic | 35.0% | |
| TTGCTTGCATTGTTTGACAA+TGG | + | chr1_2:8022327-8022346 | Msa0053570:CDS | 35.0% | |
| ! | TTTGACAATGGTGTTGAAGA+AGG | + | chr1_2:8022339-8022358 | Msa0053570:CDS | 35.0% |
| AGAACTTATGTTGAAGATGG+AGG | + | chr1_2:8022413-8022432 | Msa0053570:CDS | 35.0% | |
| GCAGAGTCTAAATTGATGAA+TGG | + | chr1_2:8022538-8022557 | Msa0053570:intron | 35.0% | |
| GAGTCTAAATTGATGAATGG+TGG | + | chr1_2:8022541-8022560 | Msa0053570:intron | 35.0% | |
| TCAAATAAGCCAATCACAAC+AGG | + | chr1_2:8022773-8022792 | Msa0053570:intron | 35.0% | |
| TTTACCTCCTGCGATATATA+AGG | + | chr1_2:8022836-8022855 | Msa0053570:intron | 35.0% | |
| CAAAGTTCCTTATATATCGC+AGG | - | chr1_2:8022846-8022865 | None:intergenic | 35.0% | |
| AAGCAATTAGGCAATTATCC+AGG | + | chr1_2:8023098-8023117 | Msa0053570:CDS | 35.0% | |
| ! | ATGCAGAATGAAGCTTTGAT+TGG | + | chr1_2:8023129-8023148 | Msa0053570:exon | 35.0% |
| TATACAAGAATTGCTGGAGA+TGG | + | chr1_2:8023206-8023225 | Msa0053570:three_prime_UTR | 35.0% | |
| ATACAAGAATTGCTGGAGAT+GGG | + | chr1_2:8023207-8023226 | Msa0053570:three_prime_UTR | 35.0% | |
| !!! | TGCTTTTTCACTTTCAACTG+TGG | - | chr1_2:8023364-8023383 | None:intergenic | 35.0% |
| AAAATCTGGTCACAACATAG+TGG | - | chr1_2:8023527-8023546 | None:intergenic | 35.0% | |
| TACAAGCTTATGACAATGAG+TGG | + | chr1_2:8023599-8023618 | Msa0053570:three_prime_UTR | 35.0% | |
| ! | AAAAGGGTATGTGTCTTCTG+CGG | + | chr1_2:8020407-8020426 | Msa0053570:CDS | 40.0% |
| !! | GGTTTGTGTTTCAGGTTAAG+AGG | + | chr1_2:8020879-8020898 | Msa0053570:intron | 40.0% |
| AATGGTGGTTGTCATGTTCT+AGG | + | chr1_2:8020968-8020987 | Msa0053570:CDS | 40.0% | |
| ATGGTGGTTGTCATGTTCTA+GGG | + | chr1_2:8020969-8020988 | Msa0053570:CDS | 40.0% | |
| AGTAGCACAAATACCTCATG+CGG | - | chr1_2:8021383-8021402 | None:intergenic | 40.0% | |
| AGCGAGGGTTTATGTATGTT+AGG | + | chr1_2:8021618-8021637 | Msa0053570:intron | 40.0% | |
| GCGAGGGTTTATGTATGTTA+GGG | + | chr1_2:8021619-8021638 | Msa0053570:intron | 40.0% | |
| TTAGGGTAATGTCAATGGAG+CGG | + | chr1_2:8021636-8021655 | Msa0053570:intron | 40.0% | |
| TCCTCATAATCAGGAGGATA+TGG | + | chr1_2:8022120-8022139 | Msa0053570:intron | 40.0% | |
| TCCATATCCTCCTGATTATG+AGG | - | chr1_2:8022124-8022143 | None:intergenic | 40.0% | |
| ATCAGGAGGATATGGAACTA+TGG | + | chr1_2:8022128-8022147 | Msa0053570:intron | 40.0% | |
| ! | AGCTTCTGGAGATGATAACT+TGG | + | chr1_2:8022154-8022173 | Msa0053570:CDS | 40.0% |
| ! | GCTTCTGGAGATGATAACTT+GGG | + | chr1_2:8022155-8022174 | Msa0053570:CDS | 40.0% |
| ATGATAACTTGGGCTCAACT+TGG | + | chr1_2:8022165-8022184 | Msa0053570:CDS | 40.0% | |
| ! | CCTGTGCAGGATGATATTTT+GGG | - | chr1_2:8022272-8022291 | None:intergenic | 40.0% |
| ! | ACCTGTGCAGGATGATATTT+TGG | - | chr1_2:8022273-8022292 | None:intergenic | 40.0% |
| AAATATCATCCTGCACAGGT+TGG | + | chr1_2:8022273-8022292 | Msa0053570:intron | 40.0% | |
| TGAGAGTCTATAACCCTGTT+TGG | + | chr1_2:8022596-8022615 | Msa0053570:intron | 40.0% | |
| AGTTCCTTATATATCGCAGG+AGG | - | chr1_2:8022843-8022862 | None:intergenic | 40.0% | |
| ! | CATTCTGCATTTTCTTGTCC+TGG | - | chr1_2:8023119-8023138 | None:intergenic | 40.0% |
| ! | CAGAATGAAGCTTTGATTGG+TGG | + | chr1_2:8023132-8023151 | Msa0053570:exon | 40.0% |
| ! | ATGAAGCTTTGATTGGTGGA+AGG | + | chr1_2:8023136-8023155 | Msa0053570:exon | 40.0% |
| TACAAGAATTGCTGGAGATG+GGG | + | chr1_2:8023208-8023227 | Msa0053570:three_prime_UTR | 40.0% | |
| TGCTCTAATATCTACTGAGG+TGG | + | chr1_2:8023499-8023518 | Msa0053570:three_prime_UTR | 40.0% | |
| !! | GTTTATGGTGGTGGAAGTGT+TGG | + | chr1_2:8020914-8020933 | Msa0053570:CDS | 45.0% |
| !! | TGGTGGAAGTGTTGGATTGA+TGG | + | chr1_2:8020922-8020941 | Msa0053570:CDS | 45.0% |
| !! | GGTGGAAGTGTTGGATTGAT+GGG | + | chr1_2:8020923-8020942 | Msa0053570:CDS | 45.0% |
| GATATCACTTTGGCCCTGTT+CGG | + | chr1_2:8021034-8021053 | Msa0053570:intron | 45.0% | |
| TAGGGTAATGTCAATGGAGC+GGG | + | chr1_2:8021637-8021656 | Msa0053570:intron | 45.0% | |
| CAGATATCTGGTGAAGCAGT+AGG | + | chr1_2:8021826-8021845 | Msa0053570:intron | 45.0% | |
| GTGAAGCAGTAGGTGAAGTA+AGG | + | chr1_2:8021836-8021855 | Msa0053570:CDS | 45.0% | |
| GCATGAGAGAAAAGCTGCAA+TGG | + | chr1_2:8021873-8021892 | Msa0053570:CDS | 45.0% | |
| TGGAACTATGGAAGAGCTTC+TGG | + | chr1_2:8022140-8022159 | Msa0053570:CDS | 45.0% | |
| CCCAAAATATCATCCTGCAC+AGG | + | chr1_2:8022269-8022288 | Msa0053570:intron | 45.0% | |
| ! | GTTGGCCTACTGAATGTTGA+TGG | + | chr1_2:8022291-8022310 | Msa0053570:CDS | 45.0% |
| ACAACTATACTCCGAGCACT+GGG | - | chr1_2:8022375-8022394 | None:intergenic | 45.0% | |
| GATATAGGGCCTGTTGTGAT+TGG | - | chr1_2:8022785-8022804 | None:intergenic | 45.0% | |
| AGCTGGCAGATGAAGCAATT+AGG | + | chr1_2:8023086-8023105 | Msa0053570:CDS | 45.0% | |
| ATCATGGCCAACCTAGAGTT+TGG | + | chr1_2:8023560-8023579 | Msa0053570:three_prime_UTR | 45.0% | |
| ! | TGGTTTGCCAAACTCTAGGT+TGG | - | chr1_2:8023570-8023589 | None:intergenic | 45.0% |
| !! | CCTTTGGTTTGCCAAACTCT+AGG | - | chr1_2:8023574-8023593 | None:intergenic | 45.0% |
| CCTAGAGTTTGGCAAACCAA+AGG | + | chr1_2:8023571-8023590 | Msa0053570:three_prime_UTR | 45.0% | |
| ACTGAAAACATGGCGGTTGC+CGG | - | chr1_2:8020441-8020460 | None:intergenic | 50.0% | |
| ! | TCATGCGGCATGAGAGCTTT+TGG | - | chr1_2:8021368-8021387 | None:intergenic | 50.0% |
| AAAAGCTCTCATGCCGCATG+AGG | + | chr1_2:8021367-8021386 | Msa0053570:CDS | 50.0% | |
| AGGGTAATGTCAATGGAGCG+GGG | + | chr1_2:8021638-8021657 | Msa0053570:intron | 50.0% | |
| TGCAATGGCTCAAGAAGCTG+AGG | + | chr1_2:8021888-8021907 | Msa0053570:CDS | 50.0% | |
| ! | GAGGCATTTATTGCACTCCC+TGG | + | chr1_2:8021907-8021926 | Msa0053570:CDS | 50.0% |
| GCTTCATTAAGCCCAGTGCT+CGG | + | chr1_2:8022361-8022380 | Msa0053570:CDS | 50.0% | |
| GACAACTATACTCCGAGCAC+TGG | - | chr1_2:8022376-8022395 | None:intergenic | 50.0% | |
| ATGAGGGGCTACATGCTCAT+GGG | - | chr1_2:8023063-8023082 | None:intergenic | 50.0% | |
| TCATCTGCCAGCTCTCATGA+GGG | - | chr1_2:8023079-8023098 | None:intergenic | 50.0% | |
| TTCATCTGCCAGCTCTCATG+AGG | - | chr1_2:8023080-8023099 | None:intergenic | 50.0% | |
| CGGCGTCACTGAAAACATGG+CGG | - | chr1_2:8020448-8020467 | None:intergenic | 55.0% | |
| TGGCGGCGTCACTGAAAACA+TGG | - | chr1_2:8020451-8020470 | None:intergenic | 55.0% | |
| TTCAGTAGGCCAACCTGTGC+AGG | - | chr1_2:8022285-8022304 | None:intergenic | 55.0% | |
| CATGAGGGGCTACATGCTCA+TGG | - | chr1_2:8023064-8023083 | None:intergenic | 55.0% | |
| ATGTAGCCCCTCATGAGAGC+TGG | + | chr1_2:8023069-8023088 | Msa0053570:CDS | 55.0% | |
| CATCTGCCAGCTCTCATGAG+GGG | - | chr1_2:8023078-8023097 | None:intergenic | 55.0% | |
| GTCTTCTGCGGCAGCAACTC+CGG | + | chr1_2:8020419-8020438 | Msa0053570:CDS | 60.0% | |
| GGGGCTACATGCTCATGGGA+AGG | - | chr1_2:8023059-8023078 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 8020246 | 8023628 | 8020246 | ID=Msa0053570;Name=Msa0053570 |
| chr1_2 | mRNA | 8020246 | 8023628 | 8020246 | ID=Msa0053570-mRNA-1;Parent=Msa0053570;Name=Msa0053570-mRNA-1;_AED=0.09;_eAED=0.09;_QI=137|1|1|1|1|1|7|489|214 |
| chr1_2 | exon | 8020246 | 8020490 | 8020246 | ID=Msa0053570-mRNA-1:exon:2810;Parent=Msa0053570-mRNA-1 |
| chr1_2 | exon | 8020893 | 8020990 | 8020893 | ID=Msa0053570-mRNA-1:exon:2811;Parent=Msa0053570-mRNA-1 |
| chr1_2 | exon | 8021358 | 8021388 | 8021358 | ID=Msa0053570-mRNA-1:exon:2812;Parent=Msa0053570-mRNA-1 |
| chr1_2 | exon | 8021829 | 8021928 | 8021829 | ID=Msa0053570-mRNA-1:exon:2813;Parent=Msa0053570-mRNA-1 |
| chr1_2 | exon | 8022133 | 8022203 | 8022133 | ID=Msa0053570-mRNA-1:exon:2814;Parent=Msa0053570-mRNA-1 |
| chr1_2 | exon | 8022291 | 8022434 | 8022291 | ID=Msa0053570-mRNA-1:exon:2815;Parent=Msa0053570-mRNA-1 |
| chr1_2 | exon | 8023047 | 8023628 | 8023047 | ID=Msa0053570-mRNA-1:exon:2816;Parent=Msa0053570-mRNA-1 |
| chr1_2 | five_prime_UTR | 8020246 | 8020382 | 8020246 | ID=Msa0053570-mRNA-1:five_prime_utr;Parent=Msa0053570-mRNA-1 |
| chr1_2 | CDS | 8020383 | 8020490 | 8020383 | ID=Msa0053570-mRNA-1:cds;Parent=Msa0053570-mRNA-1 |
| chr1_2 | CDS | 8020893 | 8020990 | 8020893 | ID=Msa0053570-mRNA-1:cds;Parent=Msa0053570-mRNA-1 |
| chr1_2 | CDS | 8021358 | 8021388 | 8021358 | ID=Msa0053570-mRNA-1:cds;Parent=Msa0053570-mRNA-1 |
| chr1_2 | CDS | 8021829 | 8021928 | 8021829 | ID=Msa0053570-mRNA-1:cds;Parent=Msa0053570-mRNA-1 |
| chr1_2 | CDS | 8022133 | 8022203 | 8022133 | ID=Msa0053570-mRNA-1:cds;Parent=Msa0053570-mRNA-1 |
| chr1_2 | CDS | 8022291 | 8022434 | 8022291 | ID=Msa0053570-mRNA-1:cds;Parent=Msa0053570-mRNA-1 |
| chr1_2 | CDS | 8023047 | 8023139 | 8023047 | ID=Msa0053570-mRNA-1:cds;Parent=Msa0053570-mRNA-1 |
| chr1_2 | three_prime_UTR | 8023140 | 8023628 | 8023140 | ID=Msa0053570-mRNA-1:three_prime_utr;Parent=Msa0053570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
