AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0363620

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0363620 MtrunA17_Chr3g0102341 86.100 741 39 5 1 724 1 694 0.0 976
Msa0363620 MtrunA17_Chr3g0102341 93.443 61 4 0 785 845 724 784 4.20e-29 124
Msa0363620 MtrunA17_Chr5g0446481 47.980 594 239 13 1 539 1 579 8.56e-116 375
Msa0363620 MtrunA17_Chr3g0132011 55.747 174 69 3 357 524 91 262 8.36e-54 196
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0363620 AT5G55660.1 60.406 197 70 5 332 522 297 491 1.31e-65 234
Msa0363620 AT5G55660.1 43.805 226 89 4 620 844 554 742 4.58e-31 131
Msa0363620 AT4G26630.2 55.849 265 96 8 276 528 236 491 4.86e-65 233
Msa0363620 AT4G26630.2 44.934 227 81 7 620 845 551 734 4.08e-33 137
Msa0363620 AT4G26630.1 55.849 265 96 8 276 528 236 491 4.86e-65 233
Msa0363620 AT4G26630.1 44.934 227 81 7 620 845 551 734 4.08e-33 137
Msa0363620 AT5G63550.1 54.802 177 74 4 359 531 95 269 4.03e-51 188
Msa0363620 AT5G63550.2 54.494 178 74 5 359 531 95 270 1.23e-49 184
Msa0363620 AT3G48710.1 42.105 266 113 8 357 616 53 283 2.63e-45 170
Msa0363620 AT1G64253.3 60.000 55 22 0 788 842 130 184 1.70e-12 67.4
Msa0363620 AT1G64253.2 60.000 55 22 0 788 842 262 316 1.02e-11 67.4
Msa0363620 AT1G64253.1 60.000 55 22 0 788 842 338 392 1.65e-11 67.8

Find 224 sgRNAs with CRISPR-Local

Find 618 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTCATCCTCTTCCATTTCT+TGG 0.132393 3_1:-56202195 None:intergenic
CTTTGAAGTTGACACATTTC+TGG 0.163507 3_1:+56209714 Msa0363620:three_prime_UTR
AGGGAAGATAAGAGTGATTC+TGG 0.195751 3_1:+56207629 Msa0363620:CDS
CCATTGGGTATATCCTTTAA+AGG 0.225439 3_1:-56202844 None:intergenic
AGTAGAAAACTTACAGATTC+AGG 0.231849 3_1:-56200690 None:intergenic
TTTCTTTGCAGATGATGTTT+TGG 0.244492 3_1:-56207690 None:intergenic
AAACTTACAGATTCAGGATT+TGG 0.265584 3_1:-56200684 None:intergenic
CGATCACTAGTTGGAGTCTT+TGG 0.269151 3_1:-56202631 None:intergenic
CTGGTATTTGATGATTTCTT+AGG 0.279713 3_1:-56207788 None:intergenic
GGGCCGTGGCACACCTTTAA+AGG 0.299444 3_1:+56202831 Msa0363620:intron
TAATCCTTTGCAGGCAGTTC+AGG 0.309307 3_1:+56204699 Msa0363620:intron
GATTTCTTAGGTGCTCTCTT+AGG 0.310357 3_1:-56207776 None:intergenic
CATAATTTAGTGCAGCCTTT+TGG 0.323313 3_1:+56209585 Msa0363620:three_prime_UTR
AAGGAAATCAGTTGAGAGAT+TGG 0.324108 3_1:+56202666 Msa0363620:CDS
GGAAGAAGTAAAAGATGATA+TGG 0.337785 3_1:+56202123 Msa0363620:CDS
GCTAGTACTTCAAGAGGTTC+TGG 0.338404 3_1:+56205438 Msa0363620:CDS
TGAATCTGAGAATGAGAAAA+TGG 0.338891 3_1:+56202228 Msa0363620:CDS
AACTGATGGAGGGAAAGTTT+TGG 0.343977 3_1:+56201667 Msa0363620:CDS
TTCTTCCTAGAAAATACCTT+TGG 0.355080 3_1:-56207842 None:intergenic
GAAGGAAGAGGGCGATGAAA+AGG 0.357929 3_1:+56202420 Msa0363620:CDS
TTGTTCCATACAATCCTCTT+TGG 0.361293 3_1:+56204438 Msa0363620:CDS
ACTGTCATCAGTCTTCCTTC+TGG 0.362007 3_1:-56204409 None:intergenic
AGACCGGTCTTCATCTTTCT+CGG 0.371584 3_1:-56209384 None:intergenic
ACTGATTTCCTTTCTCGCAC+TGG 0.372574 3_1:-56202655 None:intergenic
TATTGATGATTTCTTATTGT+TGG 0.379029 3_1:+56209740 Msa0363620:three_prime_UTR
AGCGTTCCGGTGAAATCATT+GGG 0.398650 3_1:+56201617 Msa0363620:CDS
ATTCTCAACTAAATCGCAAT+AGG 0.410227 3_1:-56208014 None:intergenic
TCCTTCCAAAGAGGATTGTA+TGG 0.410961 3_1:-56204443 None:intergenic
AGAGACGGAGGAGGAGGAGG+AGG 0.415078 3_1:+56202456 Msa0363620:CDS
GTTTGTTGTTCTCTTCAGAT+TGG 0.419185 3_1:-56209551 None:intergenic
TTAAAGTCCAAAGAGAAAAC+TGG 0.419852 3_1:+56207923 Msa0363620:CDS
TTATAGACTTTAGAGCAAAT+AGG 0.420335 3_1:+56206719 Msa0363620:CDS
ACAATCAACAGTCAGGCTTA+AGG 0.420468 3_1:-56209411 None:intergenic
TGATGGTGACATCCAAGAAA+TGG 0.422582 3_1:+56202183 Msa0363620:CDS
CCTTTCAATTTGCAGGGCCG+TGG 0.427849 3_1:+56202817 Msa0363620:intron
CTATCTAAGCAAGATCAGTA+TGG 0.429412 3_1:+56201544 Msa0363620:exon
TTTGAAGTTGACACATTTCT+GGG 0.431555 3_1:+56209715 Msa0363620:three_prime_UTR
CTAGTTGGAGTCTTTGGCTC+TGG 0.431846 3_1:-56202625 None:intergenic
CTGATTTCCTTTCTCGCACT+GGG 0.433261 3_1:-56202654 None:intergenic
GGAAGAAGTAAAAGATGATA+AGG 0.436269 3_1:+56202051 Msa0363620:CDS
GGATGTTGATGCTGAGGTTA+AGG 0.436639 3_1:+56202249 Msa0363620:CDS
CTCAACTTTGCTTCTTCCAG+AGG 0.440436 3_1:-56207717 None:intergenic
CTAAGCAGAGAAGGTTACTA+AGG 0.440850 3_1:+56208168 Msa0363620:intron
GTGTAATAAAGAGAAGTTAC+TGG 0.440933 3_1:+56205017 Msa0363620:CDS
GAAGAAGATAAGAAAGTTGA+GGG 0.441554 3_1:+56201737 Msa0363620:CDS
AGGATAAGAAAGATGAAGAT+GGG 0.442056 3_1:+56201777 Msa0363620:CDS
AAAGAGGAGAAGAAAGATGA+TGG 0.445699 3_1:+56202025 Msa0363620:CDS
ATCCTCCTCTTCATCTTCCT+CGG 0.445829 3_1:-56209360 None:intergenic
AAAGAGGAGAAGAAAGATGA+TGG 0.447587 3_1:+56201989 Msa0363620:CDS
ACCGACATTCTGAAACTACT+TGG 0.448158 3_1:+56208492 Msa0363620:CDS
AAAGATGATAAGGAAGTTGA+TGG 0.449227 3_1:+56202061 Msa0363620:CDS
AGCAAATAGGCACCAACCAT+TGG 0.451371 3_1:+56206732 Msa0363620:CDS
TAGCGTTCCGGTGAAATCAT+TGG 0.451566 3_1:+56201616 Msa0363620:CDS
ACAAACCTTTGTTGTTGACT+TGG 0.451597 3_1:-56205070 None:intergenic
AAAGATGATATGGAAGTTGA+TGG 0.451640 3_1:+56202133 Msa0363620:CDS
CTCCTCATTAACCTTCCCTC+TGG 0.452194 3_1:-56202569 None:intergenic
AGCAGAGACGGAGGAGGAGG+AGG 0.454107 3_1:+56202453 Msa0363620:CDS
TTCAAATGGAGGTAGCGTTC+CGG 0.454980 3_1:+56201604 Msa0363620:CDS
TACAGAAGATAAAGAAGAAA+AGG 0.455304 3_1:+56202276 Msa0363620:CDS
GAAAACTGAAGTAGAGGAGA+AGG 0.456878 3_1:+56202354 Msa0363620:CDS
TGAAGCAGAGACGGAGGAGG+AGG 0.457761 3_1:+56202450 Msa0363620:CDS
GAGGATAAGAAAGATGAAGA+TGG 0.461328 3_1:+56201776 Msa0363620:CDS
GGGAAGATAAGAGTGATTCT+GGG 0.463928 3_1:+56207630 Msa0363620:CDS
AGATAAGGCAGAGGGTAGTA+AGG 0.465340 3_1:+56202522 Msa0363620:CDS
TCAATATCATCATCAGACTT+TGG 0.465579 3_1:-56207812 None:intergenic
GAAAGTTGAGGGTGTGGAAA+AGG 0.466680 3_1:+56201748 Msa0363620:CDS
CTTTGCGATGTGTAATTCCT+TGG 0.466757 3_1:-56202713 None:intergenic
CAAAGCTTATCTCCCATGAC+TGG 0.469018 3_1:+56206794 Msa0363620:CDS
CATGCTCCGTTGCCCAGTCA+TGG 0.470737 3_1:-56206807 None:intergenic
AAGGAAGACTTGGTTGGAGT+TGG 0.470888 3_1:-56207902 None:intergenic
GTTGTTCTCTTCAGATTGGA+TGG 0.470961 3_1:-56209547 None:intergenic
CAGTCATGGGAGATAAGCTT+TGG 0.472052 3_1:-56206793 None:intergenic
TAAAGAAGTTGACTTCAATA+CGG 0.473503 3_1:+56208264 Msa0363620:CDS
TTAGGTGCTCTCTTAGGTGG+TGG 0.477724 3_1:-56207770 None:intergenic
GAGAAGGTTACTAAGGGAAA+AGG 0.479462 3_1:+56208175 Msa0363620:intron
GTTTCATCTTCAGATTTCTC+AGG 0.481662 3_1:-56207590 None:intergenic
CGCACTGGGCGATCACTAGT+TGG 0.484606 3_1:-56202640 None:intergenic
GTGATCGCCCAGTGCGAGAA+AGG 0.487231 3_1:+56202647 Msa0363620:CDS
GACTTTAAGGAAGACTTGGT+TGG 0.490262 3_1:-56207908 None:intergenic
GTTTCTAAGACTGATTCAAA+TGG 0.497991 3_1:+56201590 Msa0363620:CDS
CTATGAGCTACTTCCTCCAA+TGG 0.501078 3_1:-56206748 None:intergenic
GAGCTACTTCCTCCAATGGT+TGG 0.501641 3_1:-56206744 None:intergenic
AGATAAGAAAGTTGAGGGTG+TGG 0.501886 3_1:+56201742 Msa0363620:CDS
TCTGCAAAGAAAGAGTCCTC+TGG 0.504494 3_1:+56207701 Msa0363620:CDS
AAGAGGAGAAGAAAGATGAT+GGG 0.505907 3_1:+56202026 Msa0363620:CDS
TGTAGCTGATGAAGTAAAAG+AGG 0.506876 3_1:+56201904 Msa0363620:CDS
TTCTTAGGTGCTCTCTTAGG+TGG 0.507331 3_1:-56207773 None:intergenic
TGTGGTACTTGCAGATAAAG+AGG 0.509300 3_1:+56205245 Msa0363620:CDS
AAGTAAAAGAAAAGCTAGAC+AGG 0.509647 3_1:+56204995 Msa0363620:CDS
AGAGACAGAGGAGAAGGAAG+AGG 0.509912 3_1:+56202408 Msa0363620:CDS
GGAGAAGAAAGATGATGGGG+TGG 0.510926 3_1:+56202030 Msa0363620:CDS
AGGTCAAGAGTAATATATTG+AGG 0.513587 3_1:+56204719 Msa0363620:CDS
ATCTGCAAGTACCACAGTTG+TGG 0.516319 3_1:-56205238 None:intergenic
CATTGGAGGAAGTAGCTCAT+AGG 0.517679 3_1:+56206749 Msa0363620:CDS
TAAATCAAAAGAAGAAGATA+AGG 0.520812 3_1:+56202507 Msa0363620:CDS
ATCATCATCAGACTTTGGTC+TGG 0.520904 3_1:-56207807 None:intergenic
TGAAGAAGATAAGAAAGTTG+AGG 0.521925 3_1:+56201736 Msa0363620:CDS
TTTGGACTTTAAGGAAGACT+TGG 0.523782 3_1:-56207912 None:intergenic
GGTGGAAAAGAAAGATAATG+AGG 0.524990 3_1:+56202099 Msa0363620:CDS
TTCAGCTAACAAATTTGATG+TGG 0.525782 3_1:+56209259 Msa0363620:intron
CTAATCCACAATCAACAGTC+AGG 0.527682 3_1:-56209418 None:intergenic
CACAGTTGTGGTTGCATGAG+GGG 0.528551 3_1:-56205226 None:intergenic
TGAGGAGAAAACTGAAGTAG+AGG 0.528696 3_1:+56202348 Msa0363620:CDS
CAGAAATGTGTCAACTTCAA+AGG 0.529520 3_1:-56209713 None:intergenic
GTAAATGAAATAATGACAAG+AGG 0.530315 3_1:-56207972 None:intergenic
TAAGAAAGATGAAGATGGGG+TGG 0.530937 3_1:+56201781 Msa0363620:CDS
TGATGTGGGAGAAGTAAAAG+AGG 0.530959 3_1:+56201937 Msa0363620:CDS
AAATGAAGATTCTGCAGGAG+TGG 0.531285 3_1:+56207481 Msa0363620:CDS
AGCATTGAGGAGAAAGAAGA+GGG 0.531988 3_1:+56202319 Msa0363620:CDS
AGAGGATAAGAAAGATGATG+TGG 0.533254 3_1:+56201922 Msa0363620:CDS
AAGAGGAGAAGAAAGATGAT+GGG 0.534575 3_1:+56201990 Msa0363620:CDS
TGGCAGCCAACCCAACCAAA+AGG 0.535020 3_1:-56209600 None:intergenic
TGGGGCTGATGAAGTAAAAG+AGG 0.535147 3_1:+56202009 Msa0363620:CDS
GAAGTAGAGGAGAAGGAAGA+AGG 0.536555 3_1:+56202361 Msa0363620:CDS
CTGATCATCTGAGGGACTTG+AGG 0.536892 3_1:-56208215 None:intergenic
GCAGTGGAGGATAAGAATGA+TGG 0.537276 3_1:+56202166 Msa0363620:CDS
TGGGGTGGGAGAAGTAAAAG+AGG 0.537965 3_1:+56201796 Msa0363620:CDS
CCTTCCCTCTCCTTCCAAAG+AGG 0.541109 3_1:-56204452 None:intergenic
AAGAAAGACTTGGAAACTGA+TGG 0.541964 3_1:+56201653 Msa0363620:CDS
TGCGGTGGAAGAAGTGAAAG+AGG 0.542032 3_1:+56201973 Msa0363620:CDS
TCCATACAATCCTCTTTGGA+AGG 0.542692 3_1:+56204442 Msa0363620:CDS
GAGGGTAGTAAGGCTGAGAA+AGG 0.543123 3_1:+56202532 Msa0363620:CDS
AAACGAGGTACACCAAGGTC+TGG 0.545991 3_1:+56205411 Msa0363620:CDS
AACTGAAGCAGAGACGGAGG+AGG 0.546642 3_1:+56202447 Msa0363620:CDS
TGTTGTTGAGAAGAAAGACT+TGG 0.548033 3_1:+56201643 Msa0363620:CDS
GGAGAAAACTGAAGCAGAGA+CGG 0.548254 3_1:+56202441 Msa0363620:CDS
GAGACAGAGGAGAAGGAAGA+GGG 0.548993 3_1:+56202409 Msa0363620:CDS
TTAAGCCTGACTGTTGATTG+TGG 0.549788 3_1:+56209413 Msa0363620:three_prime_UTR
TGAAGAAGAGACAGAGGAGA+AGG 0.551387 3_1:+56202402 Msa0363620:CDS
ACCAAGTAGTTTCAGAATGT+CGG 0.552078 3_1:-56208493 None:intergenic
ATGCTCCGTTGCCCAGTCAT+GGG 0.552929 3_1:-56206806 None:intergenic
GAGGTACACCAAGGTCTGGT+GGG 0.555694 3_1:+56205415 Msa0363620:CDS
AAATAGGCACCAACCATTGG+AGG 0.555703 3_1:+56206735 Msa0363620:CDS
GAAAGAAGAGGGTAATGATG+AGG 0.555999 3_1:+56202330 Msa0363620:CDS
GTGGAAAAGAAAGATAATGA+GGG 0.556797 3_1:+56202100 Msa0363620:CDS
TGCCAGAGGGAAGGTTAATG+AGG 0.559631 3_1:+56202567 Msa0363620:CDS
GGAGAGTAATGGAGTCAAAG+AGG 0.559958 3_1:+56201688 Msa0363620:CDS
AAAAGAAGAAGATAAGGCAG+AGG 0.559965 3_1:+56202513 Msa0363620:CDS
TAAATGAAATAATGACAAGA+GGG 0.565678 3_1:-56207971 None:intergenic
GTACTAGCCCCACCAGACCT+TGG 0.566752 3_1:-56205423 None:intergenic
CGAGGTACACCAAGGTCTGG+TGG 0.566882 3_1:+56205414 Msa0363620:CDS
TTCGATTGAACTGAGTGTGG+TGG 0.568671 3_1:+56201502 Msa0363620:five_prime_UTR
TTTCAGAATGTCGGTAAATG+TGG 0.569605 3_1:-56208484 None:intergenic
TGGAAAAGAAAGATAATGAG+GGG 0.570434 3_1:+56202101 Msa0363620:CDS
AGATGCAGAGGGTAGCATTG+AGG 0.571029 3_1:+56202306 Msa0363620:CDS
TGAGTCCGAGGAAGATGAAG+AGG 0.571197 3_1:+56209355 Msa0363620:CDS
TCTTCCCTTTCAGATTTCTG+TGG 0.571570 3_1:-56207614 None:intergenic
ACCACAGTTGTGGTTGCATG+AGG 0.573342 3_1:-56205228 None:intergenic
AAGAAAGATGAAGATGGGGT+GGG 0.575639 3_1:+56201782 Msa0363620:CDS
GAAAACTGAAGCAGAGACGG+AGG 0.576529 3_1:+56202444 Msa0363620:CDS
GGAAGAAGAAAAGTGAGCAA+GGG 0.579111 3_1:+56207858 Msa0363620:CDS
AGGAAGAAGAAAAGTGAGCA+AGG 0.579169 3_1:+56207857 Msa0363620:CDS
GTCCGAGGAAGATGAAGAGG+AGG 0.580746 3_1:+56209358 Msa0363620:CDS
TAGCATTGAGGAGAAAGAAG+AGG 0.581637 3_1:+56202318 Msa0363620:CDS
TCTAAGACTGATTCAAATGG+AGG 0.582420 3_1:+56201593 Msa0363620:CDS
ATGCCGAGAAAGATGAAGAC+CGG 0.582887 3_1:+56209381 Msa0363620:CDS
ACAATCCTCTTTGGAAGGAG+AGG 0.583278 3_1:+56204447 Msa0363620:CDS
AAGCAAGATCAGTATGGGTG+AGG 0.583972 3_1:+56201550 Msa0363620:exon
GAGGATAAGAAAGATGATGT+GGG 0.584545 3_1:+56201923 Msa0363620:CDS
CAATCCTCTTTGGAAGGAGA+GGG 0.585119 3_1:+56204448 Msa0363620:CDS
AAAGAGGATAAGAAAGCCGA+TGG 0.586492 3_1:+56201812 Msa0363620:CDS
GGGTGTGGAAAAGGTACAAG+AGG 0.588552 3_1:+56201757 Msa0363620:CDS
TATCTAAGCAAGATCAGTAT+GGG 0.588642 3_1:+56201545 Msa0363620:exon
AACGCCACAGAAATCTGAAA+GGG 0.590074 3_1:+56207610 Msa0363620:CDS
GGATAAGAAAGATGAAGATG+GGG 0.592297 3_1:+56201778 Msa0363620:CDS
AGAGGAGAAGAAAGATGATG+GGG 0.593216 3_1:+56202027 Msa0363620:CDS
CCACAGTTGTGGTTGCATGA+GGG 0.596193 3_1:-56205227 None:intergenic
AGAGGAGAAGAAAGATGATG+GGG 0.596993 3_1:+56201991 Msa0363620:CDS
GAAGAAGAAAAGTGAGCAAG+GGG 0.597718 3_1:+56207859 Msa0363620:CDS
GCTCATGATTCAGAAAGAGC+TGG 0.598185 3_1:+56209310 Msa0363620:CDS
AGATATTATTGCCAAGCTGA+CGG 0.599554 3_1:+56205191 Msa0363620:CDS
TGAAGAAGCAGATGAGTCCG+AGG 0.600697 3_1:+56209343 Msa0363620:CDS
AAACGCCACAGAAATCTGAA+AGG 0.602760 3_1:+56207609 Msa0363620:CDS
TAAGCAGAGAAGGTTACTAA+GGG 0.604220 3_1:+56208169 Msa0363620:intron
TGACACAGAAGATGAATCAG+AGG 0.610205 3_1:+56207520 Msa0363620:CDS
AGGGGAGGAGAGCTAGCTCA+TGG 0.610469 3_1:-56207952 None:intergenic
TGATGGTGCAGATGAAGTAA+AGG 0.610805 3_1:+56202078 Msa0363620:CDS
AAAGCTTATCTCCCATGACT+GGG 0.612068 3_1:+56206795 Msa0363620:CDS
AAAGAAGAAGATAAGGCAGA+GGG 0.612875 3_1:+56202514 Msa0363620:CDS
AAGACTTGGAAACTGATGGA+GGG 0.613149 3_1:+56201657 Msa0363620:CDS
GAAATCTGAAGAAGAGACAG+AGG 0.614258 3_1:+56202396 Msa0363620:CDS
TGAAATAATGACAAGAGGGG+AGG 0.614669 3_1:-56207967 None:intergenic
TATGGGTGAGGAAGAAGTAG+TGG 0.616556 3_1:+56201562 Msa0363620:exon
TGGTGCAGATGAAGTAAAGG+TGG 0.616571 3_1:+56202081 Msa0363620:CDS
TGACATCCAAGAAATGGAAG+AGG 0.617004 3_1:+56202189 Msa0363620:CDS
ATCACGCAACTGATCATCTG+AGG 0.619605 3_1:-56208224 None:intergenic
GTACACAATAAACTACAAGC+TGG 0.622026 3_1:-56209620 None:intergenic
GGATAAGAAAGACGATGCGG+TGG 0.622917 3_1:+56201958 Msa0363620:CDS
TATCTCCCATGACTGGGCAA+CGG 0.627631 3_1:+56206801 Msa0363620:CDS
TGGCATTTAAGTTATCCAGA+AGG 0.627812 3_1:+56204394 Msa0363620:CDS
TCAGGCTTAAGGTTTAAGAC+CGG 0.629074 3_1:-56209400 None:intergenic
TCACGCAACTGATCATCTGA+GGG 0.630201 3_1:-56208223 None:intergenic
GGAAGTAGCTCATAGGAACA+AGG 0.632522 3_1:+56206756 Msa0363620:CDS
TGATGGCGTGAAAGAAGCAG+TGG 0.636058 3_1:+56202150 Msa0363620:CDS
AATTACCAAGTCAACAACAA+AGG 0.637558 3_1:+56205065 Msa0363620:CDS
AAGAGGATAAGAAAGCCGAT+GGG 0.641052 3_1:+56201813 Msa0363620:CDS
GGTGGGGCTAGTACTTCAAG+AGG 0.642776 3_1:+56205432 Msa0363620:CDS
AATCGATAAAGATGCAACCA+AGG 0.642945 3_1:+56202696 Msa0363620:CDS
AAGCAAAGTTGAGAAAACTA+CGG 0.644133 3_1:+56207727 Msa0363620:CDS
CAAGGAATTACACATCGCAA+AGG 0.645557 3_1:+56202714 Msa0363620:CDS
ATCAGTCAAGCAAGAAGCGT+AGG 0.648173 3_1:+56205379 Msa0363620:intron
AAAGACTTGGAAACTGATGG+AGG 0.652291 3_1:+56201656 Msa0363620:CDS
TACTTCAAGAGGTTCTGGAA+AGG 0.652399 3_1:+56205443 Msa0363620:CDS
CCTTTAAAGGATATACCCAA+TGG 0.653327 3_1:+56202844 Msa0363620:CDS
AGTCAAGCAAGAAGCGTAGG+CGG 0.654264 3_1:+56205382 Msa0363620:intron
CCCTCATGCAACCACAACTG+TGG 0.656212 3_1:+56205227 Msa0363620:CDS
AAGAAGAAAAGTGAGCAAGG+GGG 0.662817 3_1:+56207860 Msa0363620:CDS
GACACAGAAGATGAATCAGA+GGG 0.663780 3_1:+56207521 Msa0363620:CDS
AGAGGATAAGAAAGCCGATG+GGG 0.663923 3_1:+56201814 Msa0363620:CDS
GAAAATGGATGTTGATGCTG+AGG 0.663965 3_1:+56202243 Msa0363620:CDS
TGGCGTGAAAGAAGCAGTGG+AGG 0.667391 3_1:+56202153 Msa0363620:CDS
GCGTTCCGGTGAAATCATTG+GGG 0.668207 3_1:+56201618 Msa0363620:CDS
GGAAAAGAAAGATAATGAGG+GGG 0.671001 3_1:+56202102 Msa0363620:CDS
TGATATTGATGAAAGTCCAA+AGG 0.671560 3_1:+56207826 Msa0363620:CDS
TATCCTTTAAAGGTGTGCCA+CGG 0.672965 3_1:-56202834 None:intergenic
CCTCTTTGGAAGGAGAGGGA+AGG 0.676579 3_1:+56204452 Msa0363620:CDS
AAATGAAATAATGACAAGAG+GGG 0.679034 3_1:-56207970 None:intergenic
AGGTACACCAAGGTCTGGTG+GGG 0.685613 3_1:+56205416 Msa0363620:CDS
CGTAGGCGGACTGTCAAACG+AGG 0.686061 3_1:+56205396 Msa0363620:CDS
TTGTTCGATTGAACTGAGTG+TGG 0.687290 3_1:+56201499 Msa0363620:five_prime_UTR
CGTTCCGGTGAAATCATTGG+GGG 0.697927 3_1:+56201619 Msa0363620:CDS
GAGGATAAGAAAGCCGATGG+GGG 0.702206 3_1:+56201815 Msa0363620:CDS
CTGTCAAACGAGGTACACCA+AGG 0.724868 3_1:+56205406 Msa0363620:CDS
AGAGGATAAGAAAGACGATG+CGG 0.739008 3_1:+56201955 Msa0363620:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTTATTTTTTATTT+TGG + chr3_1:56207294-56207313 Msa0363620:intron 0.0%
!!! TTTGTTTTATTTAGAATTTT+GGG + chr3_1:56200858-56200877 Msa0363620:intron 10.0%
!! ATAATAAAAATGCATAATTA+AGG - chr3_1:56202775-56202794 None:intergenic 10.0%
!!! TTTTTATTTTTTATTTTGGA+AGG + chr3_1:56207298-56207317 Msa0363620:intron 10.0%
!!! TTGATTTATAAAGTATTTTT+AGG + chr3_1:56208339-56208358 Msa0363620:intron 10.0%
!!! CTTTGTTTTATTTAGAATTT+TGG + chr3_1:56200857-56200876 Msa0363620:intron 15.0%
!!! AAATATTATGTTTTGAACTT+AGG + chr3_1:56200902-56200921 Msa0363620:intron 15.0%
!! AAATTAACTTTAGTATCAAA+AGG + chr3_1:56203390-56203409 Msa0363620:intron 15.0%
!!! ATCAATTATGCTAATTTTAA+AGG - chr3_1:56203993-56204012 None:intergenic 15.0%
!! TTGAAATATTAAAAGACAAA+AGG - chr3_1:56204046-56204065 None:intergenic 15.0%
!! ATATTTCAAGATAATTTCTA+TGG + chr3_1:56204057-56204076 Msa0363620:intron 15.0%
!! TGGTATTCTAATATTATAAT+CGG - chr3_1:56204156-56204175 None:intergenic 15.0%
!! ATTATAATATTAGAATACCA+CGG + chr3_1:56204156-56204175 Msa0363620:intron 15.0%
!!! TATTATAGTTTGTAGTTTTT+GGG - chr3_1:56204786-56204805 None:intergenic 15.0%
!! AAAAAAAAAAAAGACAAAGT+CGG - chr3_1:56204899-56204918 None:intergenic 15.0%
!! AAAAGAAAAAAAAAAAGAGA+GGG - chr3_1:56205865-56205884 None:intergenic 15.0%
!! AAAAAGAAAAAAAAAAAGAG+AGG - chr3_1:56205866-56205885 None:intergenic 15.0%
!!! AGTTATGTTTGTTTATTTTT+AGG - chr3_1:56206643-56206662 None:intergenic 15.0%
!!! TTAATCATATAGTCATTTTT+GGG + chr3_1:56206685-56206704 Msa0363620:intron 15.0%
!!! TATATTTTAACTAATGGAAA+AGG - chr3_1:56208106-56208125 None:intergenic 15.0%
!!! CACATTTATATTTTAACTAA+TGG - chr3_1:56208112-56208131 None:intergenic 15.0%
!!! TGGAATTAAAATATTACTTT+TGG + chr3_1:56208295-56208314 Msa0363620:intron 15.0%
!! ACTACAAATAAAAAAATAGA+GGG - chr3_1:56208820-56208839 None:intergenic 15.0%
!!! GTGATTTTAGATAATTATAA+AGG + chr3_1:56208912-56208931 Msa0363620:intron 15.0%
!!! TTTTAAAGTCAATTGTTTTG+TGG + chr3_1:56200767-56200786 Msa0363620:intron 20.0%
!!! TTTAAAGTCAATTGTTTTGT+GGG + chr3_1:56200768-56200787 Msa0363620:intron 20.0%
!! ACTTGTATGTTTATAGTTTA+GGG + chr3_1:56200967-56200986 Msa0363620:intron 20.0%
!! TAAATGAGTATTTAATGTTG+TGG + chr3_1:56201039-56201058 Msa0363620:intron 20.0%
!!! TAATGTTGTGGTTTTTTTTT+TGG + chr3_1:56201051-56201070 Msa0363620:intron 20.0%
!!! ATTAGTGTCACTTTAATAAA+TGG + chr3_1:56201233-56201252 Msa0363620:intron 20.0%
!!! TATAAATGTTTTTAGACTTC+TGG + chr3_1:56201385-56201404 Msa0363620:intron 20.0%
!!! ATTTTCTTTGCACTTTTATA+TGG + chr3_1:56201444-56201463 Msa0363620:intron 20.0%
!! TAAATCAAAAGAAGAAGATA+AGG + chr3_1:56202507-56202526 Msa0363620:CDS 20.0%
!!! AATATCACATTTGAAGTATT+TGG + chr3_1:56202749-56202768 Msa0363620:intron 20.0%
!!! ATTGTTTTTTTTATCTGTGA+TGG + chr3_1:56202884-56202903 Msa0363620:intron 20.0%
!! TTGACTATCAAACAATATAT+CGG - chr3_1:56203043-56203062 None:intergenic 20.0%
!! CACTTAAATATATGTGTAAT+AGG - chr3_1:56204249-56204268 None:intergenic 20.0%
!! ATATATTTAAGTGAAGTTGA+CGG + chr3_1:56204256-56204275 Msa0363620:intron 20.0%
!! GAATCAATTTATTAGCTATT+CGG - chr3_1:56204355-56204374 None:intergenic 20.0%
!!! TTTTGTTTTTCGTATTATTG+TGG + chr3_1:56204543-56204562 Msa0363620:intron 20.0%
!!! GTATTATAGTTTGTAGTTTT+TGG - chr3_1:56204787-56204806 None:intergenic 20.0%
!!! GCAACATATTCATATTTTTA+TGG + chr3_1:56205347-56205366 Msa0363620:intron 20.0%
!!! TTTTTTTTTTTCTTTTTCCC+CGG + chr3_1:56205869-56205888 Msa0363620:intron 20.0%
!!! CAATACTAATTTTTATTTGG+TGG - chr3_1:56206326-56206345 None:intergenic 20.0%
!!! GCTCAATACTAATTTTTATT+TGG - chr3_1:56206329-56206348 None:intergenic 20.0%
!! TTTAGGAATAAATAGATGAA+GGG - chr3_1:56206626-56206645 None:intergenic 20.0%
!!! TTTTAGGAATAAATAGATGA+AGG - chr3_1:56206627-56206646 None:intergenic 20.0%
!!! CTTAATCATATAGTCATTTT+TGG + chr3_1:56206684-56206703 Msa0363620:intron 20.0%
!! AGTATTATTTAAATGCATCT+TGG - chr3_1:56206852-56206871 None:intergenic 20.0%
!!! TTTAGCTTTTGCAAATAAAT+AGG - chr3_1:56207052-56207071 None:intergenic 20.0%
!!! TCAAATTATTTTGTCGTAAA+TGG - chr3_1:56207232-56207251 None:intergenic 20.0%
!! TACGACAAAATAATTTGAAT+CGG + chr3_1:56207234-56207253 Msa0363620:intron 20.0%
!! TAAATGAAATAATGACAAGA+GGG - chr3_1:56207974-56207993 None:intergenic 20.0%
!!! CTCATAATTTTAACTGAAAA+GGG - chr3_1:56208570-56208589 None:intergenic 20.0%
!!! TCTCATAATTTTAACTGAAA+AGG - chr3_1:56208571-56208590 None:intergenic 20.0%
!!! TAAAAGAATTTTGCTCTTAA+AGG - chr3_1:56208610-56208629 None:intergenic 20.0%
!! AAATTCAAGATTAAGTATCA+AGG - chr3_1:56208793-56208812 None:intergenic 20.0%
!! CTACAAATAAAAAAATAGAG+GGG - chr3_1:56208819-56208838 None:intergenic 20.0%
!! GACTACAAATAAAAAAATAG+AGG - chr3_1:56208821-56208840 None:intergenic 20.0%
!! ATAGATCAAAGAAAATTGAT+AGG - chr3_1:56208843-56208862 None:intergenic 20.0%
!!! TAAAATTTTCAAGAGATTTG+TGG - chr3_1:56208946-56208965 None:intergenic 20.0%
!! ATTATGTAGGATTTATGTTA+GGG + chr3_1:56208979-56208998 Msa0363620:intron 20.0%
!!! ATTAAAACTTTTTTTGTCAC+AGG - chr3_1:56209197-56209216 None:intergenic 20.0%
!!! TGTGACAAAAAAAGTTTTAA+TGG + chr3_1:56209196-56209215 Msa0363620:intron 20.0%
!!! AAGTTTTAATGGATAAGTTT+TGG + chr3_1:56209207-56209226 Msa0363620:intron 20.0%
!!! AGTTTTAATGGATAAGTTTT+GGG + chr3_1:56209208-56209227 Msa0363620:intron 20.0%
!! TTGAAACTAGAAAGAAAAAA+AGG - chr3_1:56209666-56209685 None:intergenic 20.0%
!!! TATTGATGATTTCTTATTGT+TGG + chr3_1:56209740-56209759 Msa0363620:three_prime_UTR 20.0%
!! TTTTTCACAAAGAGATGAAA+GGG - chr3_1:56200730-56200749 None:intergenic 25.0%
! GACTTGTATGTTTATAGTTT+AGG + chr3_1:56200966-56200985 Msa0363620:intron 25.0%
!!! TTTAGGGTTTGATCTTTTTA+AGG + chr3_1:56200983-56201002 Msa0363620:intron 25.0%
!! TTAGGGTTTGATCTTTTTAA+GGG + chr3_1:56200984-56201003 Msa0363620:intron 25.0%
! CTTAATTATTCATTCATCTC+AGG + chr3_1:56201077-56201096 Msa0363620:intron 25.0%
!! ACTAATGAACATTTTACAAC+CGG - chr3_1:56201219-56201238 None:intergenic 25.0%
! AAAGAGGATAAGAAAAATGA+TGG + chr3_1:56201848-56201867 Msa0363620:CDS 25.0%
! TACAGAAGATAAAGAAGAAA+AGG + chr3_1:56202276-56202295 Msa0363620:CDS 25.0%
! CATAGAATGAAAGAGAAAAA+AGG - chr3_1:56203275-56203294 None:intergenic 25.0%
!! TAGCATAATTGATTTAGCAA+TGG + chr3_1:56204000-56204019 Msa0363620:intron 25.0%
!! AGCATAATTGATTTAGCAAT+GGG + chr3_1:56204001-56204020 Msa0363620:intron 25.0%
! TATATTTAAGTGAAGTTGAC+GGG + chr3_1:56204257-56204276 Msa0363620:intron 25.0%
!! ATTTAACATTTGTTACACTG+TGG + chr3_1:56204310-56204329 Msa0363620:intron 25.0%
! TTGAAACAATTGTAACAGAA+AGG - chr3_1:56204505-56204524 None:intergenic 25.0%
! AAAACAAAAGCAAACCAATA+AGG - chr3_1:56204532-56204551 None:intergenic 25.0%
!! TTATTGTGGTTCTATAAATC+AGG + chr3_1:56204557-56204576 Msa0363620:intron 25.0%
!! ATTTAGGTTATGGAATTTAC+AGG + chr3_1:56204645-56204664 Msa0363620:intron 25.0%
!! AGTAATATATTGAGGTTTTC+TGG + chr3_1:56204727-56204746 Msa0363620:CDS 25.0%
!!! AATCCGAATATTTTTTCTAC+AGG + chr3_1:56204957-56204976 Msa0363620:intron 25.0%
! TCTCCTGTAGAAAAAATATT+CGG - chr3_1:56204963-56204982 None:intergenic 25.0%
!!! CAAACAAGATCACTTATTTT+GGG - chr3_1:56205151-56205170 None:intergenic 25.0%
!! TCAAACAAGATCACTTATTT+TGG - chr3_1:56205152-56205171 None:intergenic 25.0%
! ATAGTGAAAAGGTTATAAGT+TGG - chr3_1:56205622-56205641 None:intergenic 25.0%
!! TTCATTGACTAATAGTGAAA+AGG - chr3_1:56205633-56205652 None:intergenic 25.0%
! ACTATTAGTCAATGAATACT+AGG + chr3_1:56205637-56205656 Msa0363620:intron 25.0%
!!! CGTTTTTTTTTACTGTGTTT+TGG - chr3_1:56205785-56205804 None:intergenic 25.0%
! GAAGGAAAAATTAGATGAAT+AGG - chr3_1:56205952-56205971 None:intergenic 25.0%
!!! AAAGCCAATGTTTTAAAAAC+CGG + chr3_1:56205984-56206003 Msa0363620:intron 25.0%
!! CACTAGATTTGTTTATTATC+TGG - chr3_1:56206067-56206086 None:intergenic 25.0%
! ATTACAAATCAGATAGAAAC+TGG + chr3_1:56206375-56206394 Msa0363620:intron 25.0%
! TTAGGAATAAATAGATGAAG+GGG - chr3_1:56206625-56206644 None:intergenic 25.0%
!!! TTATAGACTTTAGAGCAAAT+AGG + chr3_1:56206719-56206738 Msa0363620:CDS 25.0%
!! CATGTCAATAATATTTTCGT+GGG + chr3_1:56206826-56206845 Msa0363620:intron 25.0%
! ATACTTAATCATGAAATGCA+AGG + chr3_1:56206867-56206886 Msa0363620:intron 25.0%
! TTGTTTGTGAGATCTATTTA+GGG + chr3_1:56206898-56206917 Msa0363620:intron 25.0%
! TGAAAAAGGTTAGTGATAAA+AGG + chr3_1:56207162-56207181 Msa0363620:intron 25.0%
! ACGACAAAATAATTTGAATC+GGG + chr3_1:56207235-56207254 Msa0363620:intron 25.0%
! AGAGAAAAATGAAGAAAATG+AGG + chr3_1:56207547-56207566 Msa0363620:CDS 25.0%
! AATCTGAAGATGTGAAAAAA+AGG + chr3_1:56207657-56207676 Msa0363620:CDS 25.0%
! AAATGAAATAATGACAAGAG+GGG - chr3_1:56207973-56207992 None:intergenic 25.0%
! GTAAATGAAATAATGACAAG+AGG - chr3_1:56207975-56207994 None:intergenic 25.0%
!! TAAAGAAGTTGACTTCAATA+CGG + chr3_1:56208264-56208283 Msa0363620:CDS 25.0%
! TAAACATGCTAGATTGTTAA+GGG - chr3_1:56208713-56208732 None:intergenic 25.0%
!!! AATCTAGCATGTTTAGTTTT+AGG + chr3_1:56208718-56208737 Msa0363620:intron 25.0%
! ATATCAGTATTATGCAATCT+TGG + chr3_1:56208766-56208785 Msa0363620:intron 25.0%
!! TTTTGTTGAGTGAAAAAATG+TGG - chr3_1:56208877-56208896 None:intergenic 25.0%
! TAAAACTCAGAAGATTATGT+AGG + chr3_1:56208966-56208985 Msa0363620:intron 25.0%
! GATTATGTAGGATTTATGTT+AGG + chr3_1:56208978-56208997 Msa0363620:intron 25.0%
! ATTTATGTTAGGGTTTAAAG+AGG + chr3_1:56208989-56209008 Msa0363620:intron 25.0%
! ACATAACATAATCATGTTTG+AGG - chr3_1:56209166-56209185 None:intergenic 25.0%
! TCAAACATGATTATGTTATG+TGG + chr3_1:56209165-56209184 Msa0363620:intron 25.0%
!!! CAATTTATTTTGTGTAGAAG+TGG + chr3_1:56209497-56209516 Msa0363620:three_prime_UTR 25.0%
AAACTTACAGATTCAGGATT+TGG - chr3_1:56200687-56200706 None:intergenic 30.0%
AGTAGAAAACTTACAGATTC+AGG - chr3_1:56200693-56200712 None:intergenic 30.0%
!! CTTTTTCACAAAGAGATGAA+AGG - chr3_1:56200731-56200750 None:intergenic 30.0%
! CTACTGTTGAGAATTTTGTT+TGG + chr3_1:56200944-56200963 Msa0363620:intron 30.0%
CTCATTTAGCATTAACTTCA+GGG - chr3_1:56201027-56201046 None:intergenic 30.0%
ACTCATTTAGCATTAACTTC+AGG - chr3_1:56201028-56201047 None:intergenic 30.0%
AAATACCCTTCTGTTGTAAA+TGG + chr3_1:56201351-56201370 Msa0363620:intron 30.0%
!!! TGTTTTTAGACTTCTGGTTA+TGG + chr3_1:56201391-56201410 Msa0363620:intron 30.0%
TATCTAAGCAAGATCAGTAT+GGG + chr3_1:56201545-56201564 Msa0363620:exon 30.0%
!! GTTTCTAAGACTGATTCAAA+TGG + chr3_1:56201590-56201609 Msa0363620:CDS 30.0%
TGAAGAAGATAAGAAAGTTG+AGG + chr3_1:56201736-56201755 Msa0363620:CDS 30.0%
GAAGAAGATAAGAAAGTTGA+GGG + chr3_1:56201737-56201756 Msa0363620:CDS 30.0%
AGGATAAGAAAGATGAAGAT+GGG + chr3_1:56201777-56201796 Msa0363620:CDS 30.0%
GGAAGAAGTAAAAGATGATA+AGG + chr3_1:56202051-56202070 Msa0363620:CDS 30.0%
AAAGATGATAAGGAAGTTGA+TGG + chr3_1:56202061-56202080 Msa0363620:CDS 30.0%
GTGGAAAAGAAAGATAATGA+GGG + chr3_1:56202100-56202119 Msa0363620:CDS 30.0%
TGGAAAAGAAAGATAATGAG+GGG + chr3_1:56202101-56202120 Msa0363620:CDS 30.0%
GGAAGAAGTAAAAGATGATA+TGG + chr3_1:56202051-56202070 Msa0363620:CDS 30.0%
AAAGATGATATGGAAGTTGA+TGG + chr3_1:56202133-56202152 Msa0363620:CDS 30.0%
! ATTTTCTCATTCTCAGATTC+AGG - chr3_1:56202229-56202248 None:intergenic 30.0%
TGAATCTGAGAATGAGAAAA+TGG + chr3_1:56202228-56202247 Msa0363620:CDS 30.0%
GAAAGTGAAAGACAAAAAGA+AGG + chr3_1:56202591-56202610 Msa0363620:CDS 30.0%
TATAGAGTAGATACACAGAA+GGG - chr3_1:56202920-56202939 None:intergenic 30.0%
ACACGCACAGTTATATTATA+TGG - chr3_1:56203122-56203141 None:intergenic 30.0%
ATCCGATCAAATAAACGATT+CGG + chr3_1:56203207-56203226 Msa0363620:intron 30.0%
ATCCGAATCGTTTATTTGAT+CGG - chr3_1:56203212-56203231 None:intergenic 30.0%
TAAATTCTGTGACTATGGTT+GGG - chr3_1:56203474-56203493 None:intergenic 30.0%
AGTAGTAAATTCTGTGACTA+TGG - chr3_1:56203479-56203498 None:intergenic 30.0%
! TTCACAAAAGTACAGCAAAT+TGG - chr3_1:56203535-56203554 None:intergenic 30.0%
!! TTTGCTGTACTTTTGTGAAT+TGG + chr3_1:56203536-56203555 Msa0363620:intron 30.0%
!! GAAAGTGTTGTGAACAAATA+AGG - chr3_1:56203783-56203802 None:intergenic 30.0%
ATTGTTTCAAACCACCTTAT+TGG + chr3_1:56204515-56204534 Msa0363620:intron 30.0%
!!! ATGTTAAACTTTTCAAGTGC+AGG - chr3_1:56204600-56204619 None:intergenic 30.0%
AAGGATTAAAAAGAGTCACA+TGG - chr3_1:56204687-56204706 None:intergenic 30.0%
AGGTCAAGAGTAATATATTG+AGG + chr3_1:56204719-56204738 Msa0363620:CDS 30.0%
! AAAGGTTTTTGTTCATCCAA+AGG + chr3_1:56204847-56204866 Msa0363620:intron 30.0%
ACTACAAAGGATTTAACCTT+TGG - chr3_1:56204866-56204885 None:intergenic 30.0%
CGGTAGAAAAATTACTACAA+AGG - chr3_1:56204879-56204898 None:intergenic 30.0%
TATTCGGATTTAACAACCTT+TGG - chr3_1:56204947-56204966 None:intergenic 30.0%
AAGTAAAAGAAAAGCTAGAC+AGG + chr3_1:56204995-56205014 Msa0363620:CDS 30.0%
GTGTAATAAAGAGAAGTTAC+TGG + chr3_1:56205017-56205036 Msa0363620:CDS 30.0%
AATTACCAAGTCAACAACAA+AGG + chr3_1:56205065-56205084 Msa0363620:CDS 30.0%
! ATTGATAACCTGGTATTCAT+GGG - chr3_1:56205586-56205605 None:intergenic 30.0%
! AACAAGTTTCATTGATAACC+TGG - chr3_1:56205596-56205615 None:intergenic 30.0%
! AAAAAAGAGAGGGTATGTTT+AGG - chr3_1:56205855-56205874 None:intergenic 30.0%
AATCAGTTTAGGTCTTTCTA+GGG - chr3_1:56205913-56205932 None:intergenic 30.0%
TTATCTTCTCCAATCAGTTT+AGG - chr3_1:56205924-56205943 None:intergenic 30.0%
TTTATTATCTGGTACAACAG+CGG - chr3_1:56206056-56206075 None:intergenic 30.0%
! TTTGTGCTGTTACATATGTA+TGG + chr3_1:56206143-56206162 Msa0363620:intron 30.0%
GGTTGTTATGTCAAAGTTTA+GGG - chr3_1:56206194-56206213 None:intergenic 30.0%
TGGTTGTTATGTCAAAGTTT+AGG - chr3_1:56206195-56206214 None:intergenic 30.0%
TACTGTTGAATTTCTATGCT+TGG - chr3_1:56206403-56206422 None:intergenic 30.0%
GCAAAGATTGTTCAATAAGT+CGG - chr3_1:56206430-56206449 None:intergenic 30.0%
TGTGACTATATCTCTGATTT+GGG - chr3_1:56206461-56206480 None:intergenic 30.0%
CATAACTGACAATTAGTAAG+AGG + chr3_1:56206656-56206675 Msa0363620:intron 30.0%
!!! ATCATATAGTCATTTTTGGG+AGG + chr3_1:56206688-56206707 Msa0363620:intron 30.0%
!!! ATAAGCTTTGGAGCTTTTAT+AGG - chr3_1:56206784-56206803 None:intergenic 30.0%
! GCATGTCAATAATATTTTCG+TGG + chr3_1:56206825-56206844 Msa0363620:intron 30.0%
GTTGTTTGTGAGATCTATTT+AGG + chr3_1:56206897-56206916 Msa0363620:intron 30.0%
AAGCCAATACAAAGTACAAA+TGG + chr3_1:56207076-56207095 Msa0363620:intron 30.0%
AGCCAATACAAAGTACAAAT+GGG + chr3_1:56207077-56207096 Msa0363620:intron 30.0%
!! ATCTCCAAAAGAAGTACTAA+GGG - chr3_1:56207103-56207122 None:intergenic 30.0%
!! TGAGGTGATTAAGTTGAAAA+AGG + chr3_1:56207148-56207167 Msa0363620:intron 30.0%
! TCTCTTCTTATTTCTCAACT+TGG + chr3_1:56207430-56207449 Msa0363620:intron 30.0%
! CTCTTCTTATTTCTCAACTT+GGG + chr3_1:56207431-56207450 Msa0363620:intron 30.0%
! TCTTCTTATTTCTCAACTTG+GGG + chr3_1:56207432-56207451 Msa0363620:intron 30.0%
AAGAAAAATGAAGATTCTGC+AGG + chr3_1:56207476-56207495 Msa0363620:CDS 30.0%
! TTCTCAGGAATATCATTTTC+AGG - chr3_1:56207578-56207597 None:intergenic 30.0%
! TTTCTTTGCAGATGATGTTT+TGG - chr3_1:56207693-56207712 None:intergenic 30.0%
AAGCAAAGTTGAGAAAACTA+CGG + chr3_1:56207727-56207746 Msa0363620:CDS 30.0%
! CTGGTATTTGATGATTTCTT+AGG - chr3_1:56207791-56207810 None:intergenic 30.0%
TCAATATCATCATCAGACTT+TGG - chr3_1:56207815-56207834 None:intergenic 30.0%
TGATATTGATGAAAGTCCAA+AGG + chr3_1:56207826-56207845 Msa0363620:CDS 30.0%
!!! AAAGTCCAAAGGTATTTTCT+AGG + chr3_1:56207837-56207856 Msa0363620:CDS 30.0%
TTCTTCCTAGAAAATACCTT+TGG - chr3_1:56207845-56207864 None:intergenic 30.0%
! AGTTTTCTCTTTGGACTTTA+AGG - chr3_1:56207924-56207943 None:intergenic 30.0%
TTAAAGTCCAAAGAGAAAAC+TGG + chr3_1:56207923-56207942 Msa0363620:CDS 30.0%
ATTCTCAACTAAATCGCAAT+AGG - chr3_1:56208017-56208036 None:intergenic 30.0%
ACTTCAATACGGTAATATGT+TGG + chr3_1:56208275-56208294 Msa0363620:intron 30.0%
! GAGAGAAGAACTTTCAATTT+TGG - chr3_1:56208455-56208474 None:intergenic 30.0%
GGGTATAACTACTAATATTG+TGG - chr3_1:56208550-56208569 None:intergenic 30.0%
TCACAAGAAAATGCAAAAAC+TGG - chr3_1:56208645-56208664 None:intergenic 30.0%
TCATTATCCTTTAACCTGAA+CGG + chr3_1:56208666-56208685 Msa0363620:intron 30.0%
CTAAACATGCTAGATTGTTA+AGG - chr3_1:56208714-56208733 None:intergenic 30.0%
CACTCAACAAAAGTTTATGA+TGG + chr3_1:56208885-56208904 Msa0363620:intron 30.0%
AACATGATTATGTTATGTGG+AGG + chr3_1:56209168-56209187 Msa0363620:intron 30.0%
ACATGATTATGTTATGTGGA+GGG + chr3_1:56209169-56209188 Msa0363620:intron 30.0%
TTCAGCTAACAAATTTGATG+TGG + chr3_1:56209259-56209278 Msa0363620:intron 30.0%
! TTTGAAGTTGACACATTTCT+GGG + chr3_1:56209715-56209734 Msa0363620:three_prime_UTR 30.0%
! TTGTGGGTCGTGTAAATTTT+AGG + chr3_1:56200784-56200803 Msa0363620:intron 35.0%
! TGTGGGTCGTGTAAATTTTA+GGG + chr3_1:56200785-56200804 Msa0363620:intron 35.0%
CTATCTAAGCAAGATCAGTA+TGG + chr3_1:56201544-56201563 Msa0363620:exon 35.0%
! TCTAAGACTGATTCAAATGG+AGG + chr3_1:56201593-56201612 Msa0363620:CDS 35.0%
TGTTGTTGAGAAGAAAGACT+TGG + chr3_1:56201643-56201662 Msa0363620:CDS 35.0%
AAGAAAGACTTGGAAACTGA+TGG + chr3_1:56201653-56201672 Msa0363620:CDS 35.0%
GAGGATAAGAAAGATGAAGA+TGG + chr3_1:56201776-56201795 Msa0363620:CDS 35.0%
GGATAAGAAAGATGAAGATG+GGG + chr3_1:56201778-56201797 Msa0363620:CDS 35.0%
! GGATAAGAAAAATGATGGAG+TGG + chr3_1:56201853-56201872 Msa0363620:CDS 35.0%
TGTAGCTGATGAAGTAAAAG+AGG + chr3_1:56201904-56201923 Msa0363620:CDS 35.0%
AGAGGATAAGAAAGATGATG+TGG + chr3_1:56201922-56201941 Msa0363620:CDS 35.0%
GAGGATAAGAAAGATGATGT+GGG + chr3_1:56201923-56201942 Msa0363620:CDS 35.0%
AAAGAGGAGAAGAAAGATGA+TGG + chr3_1:56201989-56202008 Msa0363620:CDS 35.0%
AAGAGGAGAAGAAAGATGAT+GGG + chr3_1:56201990-56202009 Msa0363620:CDS 35.0%
AAAGAGGAGAAGAAAGATGA+TGG + chr3_1:56201989-56202008 Msa0363620:CDS 35.0%
AAGAGGAGAAGAAAGATGAT+GGG + chr3_1:56201990-56202009 Msa0363620:CDS 35.0%
GGTGGAAAAGAAAGATAATG+AGG + chr3_1:56202099-56202118 Msa0363620:CDS 35.0%
GGAAAAGAAAGATAATGAGG+GGG + chr3_1:56202102-56202121 Msa0363620:CDS 35.0%
AAAGGAAAAAGAAGATGCAG+AGG + chr3_1:56202294-56202313 Msa0363620:CDS 35.0%
AAGGAAAAAGAAGATGCAGA+GGG + chr3_1:56202295-56202314 Msa0363620:CDS 35.0%
AAAAGAAGAAGATAAGGCAG+AGG + chr3_1:56202513-56202532 Msa0363620:CDS 35.0%
AAAGAAGAAGATAAGGCAGA+GGG + chr3_1:56202514-56202533 Msa0363620:CDS 35.0%
AAGGAAATCAGTTGAGAGAT+TGG + chr3_1:56202666-56202685 Msa0363620:CDS 35.0%
AATCGATAAAGATGCAACCA+AGG + chr3_1:56202696-56202715 Msa0363620:CDS 35.0%
AGTTTCCCTTTCAATTTGCA+GGG + chr3_1:56202811-56202830 Msa0363620:intron 35.0%
CCATTGGGTATATCCTTTAA+AGG - chr3_1:56202847-56202866 None:intergenic 35.0%
! CCTTTAAAGGATATACCCAA+TGG + chr3_1:56202844-56202863 Msa0363620:CDS 35.0%
AAAGGATATACCCAATGGTA+TGG + chr3_1:56202849-56202868 Msa0363620:intron 35.0%
CTATAGAGTAGATACACAGA+AGG - chr3_1:56202921-56202940 None:intergenic 35.0%
TAGTAAGCAAAAGTTAGCTG+AGG + chr3_1:56202938-56202957 Msa0363620:intron 35.0%
AGTAAGCAAAAGTTAGCTGA+GGG + chr3_1:56202939-56202958 Msa0363620:intron 35.0%
ATCAACTACAAGATTGAGTG+CGG + chr3_1:56203305-56203324 Msa0363620:intron 35.0%
! GTTTTACCTGTTCAAAGTTG+TGG + chr3_1:56203441-56203460 Msa0363620:intron 35.0%
AAATTCTGTGACTATGGTTG+GGG - chr3_1:56203473-56203492 None:intergenic 35.0%
GTAAATTCTGTGACTATGGT+TGG - chr3_1:56203475-56203494 None:intergenic 35.0%
AGTCACAGAATTTACTACTG+TGG + chr3_1:56203480-56203499 Msa0363620:intron 35.0%
AATAACAGAGACAACTTAGC+TGG + chr3_1:56203637-56203656 Msa0363620:intron 35.0%
TGGTCTCAAAACGACTTAAA+TGG + chr3_1:56203657-56203676 Msa0363620:intron 35.0%
ACAAATTAATAGTGCTGCCT+CGG - chr3_1:56203687-56203706 None:intergenic 35.0%
AACATCCAGCAACATACTTT+GGG - chr3_1:56203730-56203749 None:intergenic 35.0%
AAACATCCAGCAACATACTT+TGG - chr3_1:56203731-56203750 None:intergenic 35.0%
TGTTCACAACACTTTCAACA+TGG + chr3_1:56203787-56203806 Msa0363620:intron 35.0%
GTTCACAACACTTTCAACAT+GGG + chr3_1:56203788-56203807 Msa0363620:intron 35.0%
TGCAACTCTTGAAGTATGTA+GGG - chr3_1:56204211-56204230 None:intergenic 35.0%
ATGCAACTCTTGAAGTATGT+AGG - chr3_1:56204212-56204231 None:intergenic 35.0%
TTCAAGAGTTGCATGATATG+TGG + chr3_1:56204218-56204237 Msa0363620:intron 35.0%
TCAAGAGTTGCATGATATGT+GGG + chr3_1:56204219-56204238 Msa0363620:intron 35.0%
! CTTGCATTTTTCTTCTCTAG+TGG + chr3_1:56204374-56204393 Msa0363620:intron 35.0%
! TGGCATTTAAGTTATCCAGA+AGG + chr3_1:56204394-56204413 Msa0363620:CDS 35.0%
TTGTTCCATACAATCCTCTT+TGG + chr3_1:56204438-56204457 Msa0363620:CDS 35.0%
ACAAAAGCAAACCAATAAGG+TGG - chr3_1:56204529-56204548 None:intergenic 35.0%
! ATCAGGATTTTGTATAGTGC+AGG + chr3_1:56204574-56204593 Msa0363620:intron 35.0%
TTCCATAACCTAAATATCGC+AGG - chr3_1:56204640-56204659 None:intergenic 35.0%
! GACTCTTTTTAATCCTTTGC+AGG + chr3_1:56204690-56204709 Msa0363620:intron 35.0%
!!! TGAGGTTTTCTGGTTTTGTA+TGG + chr3_1:56204737-56204756 Msa0363620:CDS 35.0%
! TTTTGTATGGCATGACAATG+AGG + chr3_1:56204750-56204769 Msa0363620:CDS 35.0%
!! ACAAACCTTTGTTGTTGACT+TGG - chr3_1:56205073-56205092 None:intergenic 35.0%
AGTCAACAACAAAGGTTTGT+TGG + chr3_1:56205073-56205092 Msa0363620:intron 35.0%
!!! CAAGATCACTTATTTTGGGA+CGG - chr3_1:56205147-56205166 None:intergenic 35.0%
AGATATTATTGCCAAGCTGA+CGG + chr3_1:56205191-56205210 Msa0363620:CDS 35.0%
CACGAGAAACAATACTTTCT+TGG - chr3_1:56205328-56205347 None:intergenic 35.0%
! CATTGATAACCTGGTATTCA+TGG - chr3_1:56205587-56205606 None:intergenic 35.0%
GCAACAATTGTGGTTGTTAT+TGG - chr3_1:56205681-56205700 None:intergenic 35.0%
CAATCAGTTTAGGTCTTTCT+AGG - chr3_1:56205914-56205933 None:intergenic 35.0%
CTAGAAAGACCTAAACTGAT+TGG + chr3_1:56205912-56205931 Msa0363620:intron 35.0%
TAATCTATGAAGTCCAGTTG+CGG - chr3_1:56206269-56206288 None:intergenic 35.0%
GTGTGACTATATCTCTGATT+TGG - chr3_1:56206462-56206481 None:intergenic 35.0%
GGTAGATATTGAGTGGTTAT+GGG - chr3_1:56206589-56206608 None:intergenic 35.0%
TAAATAGATGAAGGGGAAAG+TGG - chr3_1:56206618-56206637 None:intergenic 35.0%
! AGATCTATTTAGGGTCTGTT+TGG + chr3_1:56206907-56206926 Msa0363620:intron 35.0%
! TATTTAGGGTCTGTTTGGAT+TGG + chr3_1:56206912-56206931 Msa0363620:intron 35.0%
!! CATCTCCAAAAGAAGTACTA+AGG - chr3_1:56207104-56207123 None:intergenic 35.0%
!! AGTACTTCTTTTGGAGATGT+TGG + chr3_1:56207105-56207124 Msa0363620:intron 35.0%
!! TTTTGGAGATGTTGGAATGA+AGG + chr3_1:56207113-56207132 Msa0363620:intron 35.0%
AGGTTAGTGATAAAAGGCTT+CGG + chr3_1:56207168-56207187 Msa0363620:intron 35.0%
AAAAAAATCTACTGCCGATC+AGG - chr3_1:56207282-56207301 None:intergenic 35.0%
GTTTCATCTTCAGATTTCTC+AGG - chr3_1:56207593-56207612 None:intergenic 35.0%
!! TTTGCAGATGATGTTTTGGA+GGG - chr3_1:56207689-56207708 None:intergenic 35.0%
! TTTGGACTTTAAGGAAGACT+TGG - chr3_1:56207915-56207934 None:intergenic 35.0%
TAAGCAGAGAAGGTTACTAA+GGG + chr3_1:56208169-56208188 Msa0363620:intron 35.0%
! AAAGTTCTTCTCTCTTTTGC+AGG + chr3_1:56208461-56208480 Msa0363620:intron 35.0%
TTTCAGAATGTCGGTAAATG+TGG - chr3_1:56208487-56208506 None:intergenic 35.0%
ACCAAGTAGTTTCAGAATGT+CGG - chr3_1:56208496-56208515 None:intergenic 35.0%
! AATTATGCCGTTCAGGTTAA+AGG - chr3_1:56208676-56208695 None:intergenic 35.0%
TATGTTAGGGTTTAAAGAGG+TGG + chr3_1:56208992-56209011 Msa0363620:intron 35.0%
ATGTTAGGGTTTAAAGAGGT+GGG + chr3_1:56208993-56209012 Msa0363620:intron 35.0%
TTTAAAGAGGTGGGGAAAAT+TGG + chr3_1:56209002-56209021 Msa0363620:intron 35.0%
TTAAAGAGGTGGGGAAAATT+GGG + chr3_1:56209003-56209022 Msa0363620:intron 35.0%
! ACATAATCATGTTTGAGGCA+CGG - chr3_1:56209161-56209180 None:intergenic 35.0%
!!! CTTGATAGCTGACTTTTTTG+GGG - chr3_1:56209291-56209310 None:intergenic 35.0%
!!! GCTTGATAGCTGACTTTTTT+GGG - chr3_1:56209292-56209311 None:intergenic 35.0%
!!! AGCTTGATAGCTGACTTTTT+TGG - chr3_1:56209293-56209312 None:intergenic 35.0%
!! GTTTGTTGTTCTCTTCAGAT+TGG - chr3_1:56209554-56209573 None:intergenic 35.0%
! CATAATTTAGTGCAGCCTTT+TGG + chr3_1:56209585-56209604 Msa0363620:three_prime_UTR 35.0%
GTACACAATAAACTACAAGC+TGG - chr3_1:56209623-56209642 None:intergenic 35.0%
CAGAAATGTGTCAACTTCAA+AGG - chr3_1:56209716-56209735 None:intergenic 35.0%
!! CTTTGAAGTTGACACATTTC+TGG + chr3_1:56209714-56209733 Msa0363620:three_prime_UTR 35.0%
GAGATGAAAGGGAATTGAAG+TGG - chr3_1:56200719-56200738 None:intergenic 40.0%
! GCAAATTACACTTGAGTTGC+TGG + chr3_1:56201133-56201152 Msa0363620:intron 40.0%
AGTTTAGCATTGTAACGTCG+AGG + chr3_1:56201168-56201187 Msa0363620:intron 40.0%
GCACACCATTTACAACAGAA+GGG - chr3_1:56201359-56201378 None:intergenic 40.0%
AGCACACCATTTACAACAGA+AGG - chr3_1:56201360-56201379 None:intergenic 40.0%
TCTGTTGTAAATGGTGTGCT+AGG + chr3_1:56201360-56201379 Msa0363620:intron 40.0%
CTGTTGTAAATGGTGTGCTA+GGG + chr3_1:56201361-56201380 Msa0363620:intron 40.0%
ACTCAGTTCAATCGAACAAC+TGG - chr3_1:56201498-56201517 None:intergenic 40.0%
TTGTTCGATTGAACTGAGTG+TGG + chr3_1:56201499-56201518 Msa0363620:five_prime_UTR 40.0%
AAAGACTTGGAAACTGATGG+AGG + chr3_1:56201656-56201675 Msa0363620:CDS 40.0%
AAGACTTGGAAACTGATGGA+GGG + chr3_1:56201657-56201676 Msa0363620:CDS 40.0%
! AACTGATGGAGGGAAAGTTT+TGG + chr3_1:56201667-56201686 Msa0363620:CDS 40.0%
!!! GGGAAAGTTTTGGAGAGTAA+TGG + chr3_1:56201677-56201696 Msa0363620:CDS 40.0%
AGATAAGAAAGTTGAGGGTG+TGG + chr3_1:56201742-56201761 Msa0363620:CDS 40.0%
TAAGAAAGATGAAGATGGGG+TGG + chr3_1:56201781-56201800 Msa0363620:CDS 40.0%
AAGAAAGATGAAGATGGGGT+GGG + chr3_1:56201782-56201801 Msa0363620:CDS 40.0%
AAAGAGGATAAGAAAGCCGA+TGG + chr3_1:56201812-56201831 Msa0363620:CDS 40.0%
AAGAGGATAAGAAAGCCGAT+GGG + chr3_1:56201813-56201832 Msa0363620:CDS 40.0%
TGATGTGGGAGAAGTAAAAG+AGG + chr3_1:56201937-56201956 Msa0363620:CDS 40.0%
AGAGGATAAGAAAGACGATG+CGG + chr3_1:56201955-56201974 Msa0363620:CDS 40.0%
AGAGGAGAAGAAAGATGATG+GGG + chr3_1:56201991-56202010 Msa0363620:CDS 40.0%
AGAGGAGAAGAAAGATGATG+GGG + chr3_1:56201991-56202010 Msa0363620:CDS 40.0%
! TGATGGTGCAGATGAAGTAA+AGG + chr3_1:56202078-56202097 Msa0363620:CDS 40.0%
! TGATGGTGACATCCAAGAAA+TGG + chr3_1:56202183-56202202 Msa0363620:CDS 40.0%
TGACATCCAAGAAATGGAAG+AGG + chr3_1:56202189-56202208 Msa0363620:CDS 40.0%
TGTCATCCTCTTCCATTTCT+TGG - chr3_1:56202198-56202217 None:intergenic 40.0%
GAAAATGGATGTTGATGCTG+AGG + chr3_1:56202243-56202262 Msa0363620:CDS 40.0%
! TAGCATTGAGGAGAAAGAAG+AGG + chr3_1:56202318-56202337 Msa0363620:CDS 40.0%
! AGCATTGAGGAGAAAGAAGA+GGG + chr3_1:56202319-56202338 Msa0363620:CDS 40.0%
GAAAGAAGAGGGTAATGATG+AGG + chr3_1:56202330-56202349 Msa0363620:CDS 40.0%
TGAGGAGAAAACTGAAGTAG+AGG + chr3_1:56202348-56202367 Msa0363620:CDS 40.0%
GAAAACTGAAGTAGAGGAGA+AGG + chr3_1:56202354-56202373 Msa0363620:CDS 40.0%
GAAATCTGAAGAAGAGACAG+AGG + chr3_1:56202396-56202415 Msa0363620:CDS 40.0%
CTTTGCGATGTGTAATTCCT+TGG - chr3_1:56202716-56202735 None:intergenic 40.0%
CAAGGAATTACACATCGCAA+AGG + chr3_1:56202714-56202733 Msa0363620:CDS 40.0%
CAGTTTCCCTTTCAATTTGC+AGG + chr3_1:56202810-56202829 Msa0363620:intron 40.0%
! TATCCTTTAAAGGTGTGCCA+CGG - chr3_1:56202837-56202856 None:intergenic 40.0%
!! AAGAGAAGCACCATACCATT+GGG - chr3_1:56202862-56202881 None:intergenic 40.0%
!! AAAGAGAAGCACCATACCAT+TGG - chr3_1:56202863-56202882 None:intergenic 40.0%
CACTAACACATAGTACAAGC+AGG + chr3_1:56202975-56202994 Msa0363620:intron 40.0%
TAGTACAAGCAGGACAGTAT+AGG + chr3_1:56202985-56203004 Msa0363620:intron 40.0%
TGTATGCCACAACTTTGAAC+AGG - chr3_1:56203450-56203469 None:intergenic 40.0%
ACGACTTAAATGGTTAACCG+AGG + chr3_1:56203667-56203686 Msa0363620:intron 40.0%
! TGCTGTCAACATTTTCAGTG+TGG + chr3_1:56203856-56203875 Msa0363620:intron 40.0%
! GCTGTCAACATTTTCAGTGT+GGG + chr3_1:56203857-56203876 Msa0363620:intron 40.0%
!! ATCCCATTACTGTTTGCTGT+TGG + chr3_1:56203889-56203908 Msa0363620:intron 40.0%
!! TCCCATTACTGTTTGCTGTT+GGG + chr3_1:56203890-56203909 Msa0363620:intron 40.0%
ACCCAACAGCAAACAGTAAT+GGG - chr3_1:56203894-56203913 None:intergenic 40.0%
AACCCAACAGCAAACAGTAA+TGG - chr3_1:56203895-56203914 None:intergenic 40.0%
GCAACTCTTGAAGTATGTAG+GGG - chr3_1:56204210-56204229 None:intergenic 40.0%
CAAGAGTTGCATGATATGTG+GGG + chr3_1:56204220-56204239 Msa0363620:intron 40.0%
AAGAGTTGCATGATATGTGG+GGG + chr3_1:56204221-56204240 Msa0363620:intron 40.0%
TTAGCTATTCGGAAGAAGCA+TGG - chr3_1:56204344-56204363 None:intergenic 40.0%
TCCATACAATCCTCTTTGGA+AGG + chr3_1:56204442-56204461 Msa0363620:CDS 40.0%
TCCTTCCAAAGAGGATTGTA+TGG - chr3_1:56204446-56204465 None:intergenic 40.0%
! AGCCTGCGATATTTAGGTTA+TGG + chr3_1:56204635-56204654 Msa0363620:intron 40.0%
TTAACAACCTTTGGCTGACA+AGG - chr3_1:56204938-56204957 None:intergenic 40.0%
CATTGCTGATGTTCTTGTTG+TGG + chr3_1:56205104-56205123 Msa0363620:intron 40.0%
!!! ATCACTTATTTTGGGACGGA+GGG - chr3_1:56205143-56205162 None:intergenic 40.0%
TTTGACAATGTGCACTATGC+AGG + chr3_1:56205167-56205186 Msa0363620:intron 40.0%
TGTGGTACTTGCAGATAAAG+AGG + chr3_1:56205245-56205264 Msa0363620:CDS 40.0%
!! TACTTCAAGAGGTTCTGGAA+AGG + chr3_1:56205443-56205462 Msa0363620:CDS 40.0%
AGAGAGCAAGACAAGCATAA+AGG - chr3_1:56205532-56205551 None:intergenic 40.0%
ACAGCTGTATGCAACAATTG+TGG - chr3_1:56205691-56205710 None:intergenic 40.0%
TGTTGCATACAGCTGTGTAA+TGG + chr3_1:56205695-56205714 Msa0363620:intron 40.0%
!!! TGTGTTTTGGCTGCAATTCA+GGG - chr3_1:56205772-56205791 None:intergenic 40.0%
CATCACAGTAGTAGCTGATT+TGG - chr3_1:56205820-56205839 None:intergenic 40.0%
CAAATCAGCTACTACTGTGA+TGG + chr3_1:56205818-56205837 Msa0363620:intron 40.0%
ATCCAAAAAGCAAAAACGCC+GGG - chr3_1:56205890-56205909 None:intergenic 40.0%
GATCCAAAAAGCAAAAACGC+CGG - chr3_1:56205891-56205910 None:intergenic 40.0%
!!! ACGGCCGGTTTTTAAAACAT+TGG - chr3_1:56205991-56206010 None:intergenic 40.0%
AGAATACCTGTTCACTCAGT+AGG - chr3_1:56206300-56206319 None:intergenic 40.0%
TACTGAGTGAACAGGTATTC+TGG + chr3_1:56206299-56206318 Msa0363620:intron 40.0%
AGACCAAGCTCTCTTATCAT+TGG - chr3_1:56206560-56206579 None:intergenic 40.0%
AGATATTGAGTGGTTATGGG+AGG - chr3_1:56206586-56206605 None:intergenic 40.0%
GGGTAGATATTGAGTGGTTA+TGG - chr3_1:56206590-56206609 None:intergenic 40.0%
GTCATTGGGTAGATATTGAG+TGG - chr3_1:56206596-56206615 None:intergenic 40.0%
AAAGCTTATCTCCCATGACT+GGG + chr3_1:56206795-56206814 Msa0363620:CDS 40.0%
GGCCCATTTGTACTTTGTAT+TGG - chr3_1:56207082-56207101 None:intergenic 40.0%
AGATGTTGGAATGAAGGTTG+TGG + chr3_1:56207119-56207138 Msa0363620:intron 40.0%
TGAAGGTTGTGGTGTTTATG+AGG + chr3_1:56207130-56207149 Msa0363620:intron 40.0%
!! TGGGGCTGTATATTTTTCAG+AGG + chr3_1:56207450-56207469 Msa0363620:intron 40.0%
AAATGAAGATTCTGCAGGAG+TGG + chr3_1:56207481-56207500 Msa0363620:CDS 40.0%
TGACACAGAAGATGAATCAG+AGG + chr3_1:56207520-56207539 Msa0363620:CDS 40.0%
GACACAGAAGATGAATCAGA+GGG + chr3_1:56207521-56207540 Msa0363620:CDS 40.0%
AAACGCCACAGAAATCTGAA+AGG + chr3_1:56207609-56207628 Msa0363620:CDS 40.0%
AACGCCACAGAAATCTGAAA+GGG + chr3_1:56207610-56207629 Msa0363620:CDS 40.0%
TCTTCCCTTTCAGATTTCTG+TGG - chr3_1:56207617-56207636 None:intergenic 40.0%
AGGGAAGATAAGAGTGATTC+TGG + chr3_1:56207629-56207648 Msa0363620:CDS 40.0%
GGGAAGATAAGAGTGATTCT+GGG + chr3_1:56207630-56207649 Msa0363620:CDS 40.0%
!! CTTTGCAGATGATGTTTTGG+AGG - chr3_1:56207690-56207709 None:intergenic 40.0%
GATTTCTTAGGTGCTCTCTT+AGG - chr3_1:56207779-56207798 None:intergenic 40.0%
ATCATCATCAGACTTTGGTC+TGG - chr3_1:56207810-56207829 None:intergenic 40.0%
AGGAAGAAGAAAAGTGAGCA+AGG + chr3_1:56207857-56207876 Msa0363620:CDS 40.0%
GGAAGAAGAAAAGTGAGCAA+GGG + chr3_1:56207858-56207877 Msa0363620:CDS 40.0%
GAAGAAGAAAAGTGAGCAAG+GGG + chr3_1:56207859-56207878 Msa0363620:CDS 40.0%
AAGAAGAAAAGTGAGCAAGG+GGG + chr3_1:56207860-56207879 Msa0363620:CDS 40.0%
! GACTTTAAGGAAGACTTGGT+TGG - chr3_1:56207911-56207930 None:intergenic 40.0%
! GCATCTACCAGTTTTCTCTT+TGG - chr3_1:56207933-56207952 None:intergenic 40.0%
TGAAATAATGACAAGAGGGG+AGG - chr3_1:56207970-56207989 None:intergenic 40.0%
! CTTTGTGTTCTAAGCAGAGA+AGG + chr3_1:56208159-56208178 Msa0363620:intron 40.0%
CTAAGCAGAGAAGGTTACTA+AGG + chr3_1:56208168-56208187 Msa0363620:intron 40.0%
GAGAAGGTTACTAAGGGAAA+AGG + chr3_1:56208175-56208194 Msa0363620:intron 40.0%
! GTAATGCACCTTCATTGACT+GGG + chr3_1:56208375-56208394 Msa0363620:intron 40.0%
! TAATGCACCTTCATTGACTG+GGG + chr3_1:56208376-56208395 Msa0363620:intron 40.0%
!! ACCGACATTCTGAAACTACT+TGG + chr3_1:56208492-56208511 Msa0363620:CDS 40.0%
TACTGCAAATTATGCCGTTC+AGG - chr3_1:56208683-56208702 None:intergenic 40.0%
TGTTAGGGTTTAAAGAGGTG+GGG + chr3_1:56208994-56209013 Msa0363620:intron 40.0%
TTTAACGTCTTGACCAACCA+AGG + chr3_1:56209047-56209066 Msa0363620:intron 40.0%
ACCTTGGTTCACCATAGTAT+GGG - chr3_1:56209097-56209116 None:intergenic 40.0%
AACCTTGGTTCACCATAGTA+TGG - chr3_1:56209098-56209117 None:intergenic 40.0%
! TCAGGCTTAAGGTTTAAGAC+CGG - chr3_1:56209403-56209422 None:intergenic 40.0%
ACAATCAACAGTCAGGCTTA+AGG - chr3_1:56209414-56209433 None:intergenic 40.0%
! TTAAGCCTGACTGTTGATTG+TGG + chr3_1:56209413-56209432 Msa0363620:three_prime_UTR 40.0%
CTAATCCACAATCAACAGTC+AGG - chr3_1:56209421-56209440 None:intergenic 40.0%
GTTGTTCTCTTCAGATTGGA+TGG - chr3_1:56209550-56209569 None:intergenic 40.0%
! ATTTAGTGCAGCCTTTTGGT+TGG + chr3_1:56209589-56209608 Msa0363620:three_prime_UTR 40.0%
!! TTTAGTGCAGCCTTTTGGTT+GGG + chr3_1:56209590-56209609 Msa0363620:three_prime_UTR 40.0%
GCTGAGTTCAAATCCCCTTA+CGG + chr3_1:56201192-56201211 Msa0363620:intron 45.0%
CTGAGTTCAAATCCCCTTAC+GGG + chr3_1:56201193-56201212 Msa0363620:intron 45.0%
! ATTTTACAACCGGCCCGTAA+GGG - chr3_1:56201209-56201228 None:intergenic 45.0%
TTCGATTGAACTGAGTGTGG+TGG + chr3_1:56201502-56201521 Msa0363620:five_prime_UTR 45.0%
AAGCAAGATCAGTATGGGTG+AGG + chr3_1:56201550-56201569 Msa0363620:exon 45.0%
TATGGGTGAGGAAGAAGTAG+TGG + chr3_1:56201562-56201581 Msa0363620:exon 45.0%
TTCAAATGGAGGTAGCGTTC+CGG + chr3_1:56201604-56201623 Msa0363620:CDS 45.0%
TAGCGTTCCGGTGAAATCAT+TGG + chr3_1:56201616-56201635 Msa0363620:CDS 45.0%
AGCGTTCCGGTGAAATCATT+GGG + chr3_1:56201617-56201636 Msa0363620:CDS 45.0%
ACATCCCCCAATGATTTCAC+CGG - chr3_1:56201626-56201645 None:intergenic 45.0%
! GGAGAGTAATGGAGTCAAAG+AGG + chr3_1:56201688-56201707 Msa0363620:CDS 45.0%
! GAAAGTTGAGGGTGTGGAAA+AGG + chr3_1:56201748-56201767 Msa0363620:CDS 45.0%
AGAGGATAAGAAAGCCGATG+GGG + chr3_1:56201814-56201833 Msa0363620:CDS 45.0%
! TTTTACTTCATCGCCCCCAT+CGG - chr3_1:56201831-56201850 None:intergenic 45.0%
TGGGGCTGATGAAGTAAAAG+AGG + chr3_1:56202009-56202028 Msa0363620:CDS 45.0%
TGGTGCAGATGAAGTAAAGG+TGG + chr3_1:56202081-56202100 Msa0363620:CDS 45.0%
GCAGTGGAGGATAAGAATGA+TGG + chr3_1:56202166-56202185 Msa0363620:CDS 45.0%
GGATGTTGATGCTGAGGTTA+AGG + chr3_1:56202249-56202268 Msa0363620:CDS 45.0%
GAAGTAGAGGAGAAGGAAGA+AGG + chr3_1:56202361-56202380 Msa0363620:CDS 45.0%
TGAAGAAGAGACAGAGGAGA+AGG + chr3_1:56202402-56202421 Msa0363620:CDS 45.0%
GGAGAAAACTGAAGCAGAGA+CGG + chr3_1:56202441-56202460 Msa0363620:CDS 45.0%
AGATAAGGCAGAGGGTAGTA+AGG + chr3_1:56202522-56202541 Msa0363620:CDS 45.0%
! GATCAAAAAAGCGTGCCAGA+GGG + chr3_1:56202554-56202573 Msa0363620:CDS 45.0%
CGATCACTAGTTGGAGTCTT+TGG - chr3_1:56202634-56202653 None:intergenic 45.0%
CTGATTTCCTTTCTCGCACT+GGG - chr3_1:56202657-56202676 None:intergenic 45.0%
! ACTGATTTCCTTTCTCGCAC+TGG - chr3_1:56202658-56202677 None:intergenic 45.0%
ACAGAGACACAAGTCAACTC+TGG + chr3_1:56203598-56203617 Msa0363620:intron 45.0%
! CCAGCAACATACTTTGGGAA+TGG - chr3_1:56203725-56203744 None:intergenic 45.0%
CCATTCCCAAAGTATGTTGC+TGG + chr3_1:56203722-56203741 Msa0363620:intron 45.0%
ACATGGGACTAATGCAACTG+TGG + chr3_1:56203804-56203823 Msa0363620:intron 45.0%
CATGGGACTAATGCAACTGT+GGG + chr3_1:56203805-56203824 Msa0363620:intron 45.0%
CAGTACGTTATTTGAGTCCG+TGG - chr3_1:56204176-56204195 None:intergenic 45.0%
AGTGAAGTTGACGGGATATG+TGG + chr3_1:56204265-56204284 Msa0363620:intron 45.0%
GTGAAGTTGACGGGATATGT+GGG + chr3_1:56204266-56204285 Msa0363620:intron 45.0%
ACTGTCATCAGTCTTCCTTC+TGG - chr3_1:56204412-56204431 None:intergenic 45.0%
! ACAATCCTCTTTGGAAGGAG+AGG + chr3_1:56204447-56204466 Msa0363620:CDS 45.0%
! CAATCCTCTTTGGAAGGAGA+GGG + chr3_1:56204448-56204467 Msa0363620:CDS 45.0%
TAATCCTTTGCAGGCAGTTC+AGG + chr3_1:56204699-56204718 Msa0363620:intron 45.0%
TTTGAGTCCTTGTCAGCCAA+AGG + chr3_1:56204928-56204947 Msa0363620:intron 45.0%
!!! GATCACTTATTTTGGGACGG+AGG - chr3_1:56205144-56205163 None:intergenic 45.0%
AACCAAAAAGTCCGTCAGCT+TGG - chr3_1:56205205-56205224 None:intergenic 45.0%
ATCTGCAAGTACCACAGTTG+TGG - chr3_1:56205241-56205260 None:intergenic 45.0%
! ATCAGTCAAGCAAGAAGCGT+AGG + chr3_1:56205379-56205398 Msa0363620:intron 45.0%
GCTAGTACTTCAAGAGGTTC+TGG + chr3_1:56205438-56205457 Msa0363620:CDS 45.0%
! GTTTTCCTCCCATGAATACC+AGG + chr3_1:56205575-56205594 Msa0363620:intron 45.0%
GATAACCTGGTATTCATGGG+AGG - chr3_1:56205583-56205602 None:intergenic 45.0%
! GTAATGGAGCACTATGCAGA+TGG + chr3_1:56205711-56205730 Msa0363620:intron 45.0%
!!! CTGTGTTTTGGCTGCAATTC+AGG - chr3_1:56205773-56205792 None:intergenic 45.0%
TCCAAAAAGCAAAAACGCCG+GGG - chr3_1:56205889-56205908 None:intergenic 45.0%
GGTCACACCAGTTCAATCTA+CGG - chr3_1:56206010-56206029 None:intergenic 45.0%
TAGATTGAACTGGTGTGACC+AGG + chr3_1:56206010-56206029 Msa0363620:intron 45.0%
CCAAGCTCTCTTATCATTGG+AGG - chr3_1:56206557-56206576 None:intergenic 45.0%
CCTCCAATGATAAGAGAGCT+TGG + chr3_1:56206554-56206573 Msa0363620:intron 45.0%
TGAAGGGGAAAGTGGTCATT+GGG - chr3_1:56206610-56206629 None:intergenic 45.0%
ATGAAGGGGAAAGTGGTCAT+TGG - chr3_1:56206611-56206630 None:intergenic 45.0%
AGCAAATAGGCACCAACCAT+TGG + chr3_1:56206732-56206751 Msa0363620:CDS 45.0%
AAATAGGCACCAACCATTGG+AGG + chr3_1:56206735-56206754 Msa0363620:CDS 45.0%
CTATGAGCTACTTCCTCCAA+TGG - chr3_1:56206751-56206770 None:intergenic 45.0%
CATTGGAGGAAGTAGCTCAT+AGG + chr3_1:56206749-56206768 Msa0363620:CDS 45.0%
GGAAGTAGCTCATAGGAACA+AGG + chr3_1:56206756-56206775 Msa0363620:CDS 45.0%
CAGTCATGGGAGATAAGCTT+TGG - chr3_1:56206796-56206815 None:intergenic 45.0%
CAAAGCTTATCTCCCATGAC+TGG + chr3_1:56206794-56206813 Msa0363620:CDS 45.0%
! TGGGCCCTTAGTACTTCTTT+TGG + chr3_1:56207096-56207115 Msa0363620:intron 45.0%
TCTGCAAAGAAAGAGTCCTC+TGG + chr3_1:56207701-56207720 Msa0363620:CDS 45.0%
CTCAACTTTGCTTCTTCCAG+AGG - chr3_1:56207720-56207739 None:intergenic 45.0%
TTCTTAGGTGCTCTCTTAGG+TGG - chr3_1:56207776-56207795 None:intergenic 45.0%
! AAGGAAGACTTGGTTGGAGT+TGG - chr3_1:56207905-56207924 None:intergenic 45.0%
TCACGCAACTGATCATCTGA+GGG - chr3_1:56208226-56208245 None:intergenic 45.0%
ATCACGCAACTGATCATCTG+AGG - chr3_1:56208227-56208246 None:intergenic 45.0%
CGTAATGCACCTTCATTGAC+TGG + chr3_1:56208374-56208393 Msa0363620:intron 45.0%
TTCACCATAGTATGGGAGAC+TGG - chr3_1:56209090-56209109 None:intergenic 45.0%
TCCCATACTATGGTGAACCA+AGG + chr3_1:56209093-56209112 Msa0363620:intron 45.0%
GTGAACCAAGGTTCAAACGT+CGG + chr3_1:56209105-56209124 Msa0363620:intron 45.0%
GCTCATGATTCAGAAAGAGC+TGG + chr3_1:56209310-56209329 Msa0363620:CDS 45.0%
ATCCTCCTCTTCATCTTCCT+CGG - chr3_1:56209363-56209382 None:intergenic 45.0%
ATGCCGAGAAAGATGAAGAC+CGG + chr3_1:56209381-56209400 Msa0363620:CDS 45.0%
AGACCGGTCTTCATCTTTCT+CGG - chr3_1:56209387-56209406 None:intergenic 45.0%
!! TTTCAAAAAAAAAAAAAATT+GGG - chr3_1:56200833-56200852 None:intergenic 5.0%
!! ATTTCAAAAAAAAAAAAAAT+TGG - chr3_1:56200834-56200853 None:intergenic 5.0%
!! ATATCATATAAAATATTTAA+AGG + chr3_1:56204829-56204848 Msa0363620:intron 5.0%
! TTTTACAACCGGCCCGTAAG+GGG - chr3_1:56201208-56201227 None:intergenic 50.0%
! CATTTTACAACCGGCCCGTA+AGG - chr3_1:56201210-56201229 None:intergenic 50.0%
GCGTTCCGGTGAAATCATTG+GGG + chr3_1:56201618-56201637 Msa0363620:CDS 50.0%
CGTTCCGGTGAAATCATTGG+GGG + chr3_1:56201619-56201638 Msa0363620:CDS 50.0%
! GGGTGTGGAAAAGGTACAAG+AGG + chr3_1:56201757-56201776 Msa0363620:CDS 50.0%
TGGGGTGGGAGAAGTAAAAG+AGG + chr3_1:56201796-56201815 Msa0363620:CDS 50.0%
GAGGATAAGAAAGCCGATGG+GGG + chr3_1:56201815-56201834 Msa0363620:CDS 50.0%
TGGGGGCGATGAAGTAAAAG+AGG + chr3_1:56201832-56201851 Msa0363620:CDS 50.0%
GGATAAGAAAGACGATGCGG+TGG + chr3_1:56201958-56201977 Msa0363620:CDS 50.0%
TGCGGTGGAAGAAGTGAAAG+AGG + chr3_1:56201973-56201992 Msa0363620:CDS 50.0%
!! GGAGAAGAAAGATGATGGGG+TGG + chr3_1:56201994-56202013 Msa0363620:CDS 50.0%
! TGATGGCGTGAAAGAAGCAG+TGG + chr3_1:56202150-56202169 Msa0363620:CDS 50.0%
AGATGCAGAGGGTAGCATTG+AGG + chr3_1:56202306-56202325 Msa0363620:CDS 50.0%
AGAGACAGAGGAGAAGGAAG+AGG + chr3_1:56202408-56202427 Msa0363620:CDS 50.0%
GAGACAGAGGAGAAGGAAGA+GGG + chr3_1:56202409-56202428 Msa0363620:CDS 50.0%
GAAGGAAGAGGGCGATGAAA+AGG + chr3_1:56202420-56202439 Msa0363620:CDS 50.0%
GAAAACTGAAGCAGAGACGG+AGG + chr3_1:56202444-56202463 Msa0363620:CDS 50.0%
GAGGGTAGTAAGGCTGAGAA+AGG + chr3_1:56202532-56202551 Msa0363620:CDS 50.0%
! GGATCAAAAAAGCGTGCCAG+AGG + chr3_1:56202553-56202572 Msa0363620:CDS 50.0%
! AAAAAAGCGTGCCAGAGGGA+AGG + chr3_1:56202558-56202577 Msa0363620:CDS 50.0%
TGCCAGAGGGAAGGTTAATG+AGG + chr3_1:56202567-56202586 Msa0363620:CDS 50.0%
CTCCTCATTAACCTTCCCTC+TGG - chr3_1:56202572-56202591 None:intergenic 50.0%
! CTAGTTGGAGTCTTTGGCTC+TGG - chr3_1:56202628-56202647 None:intergenic 50.0%
CACGGCCCTGCAAATTGAAA+GGG - chr3_1:56202819-56202838 None:intergenic 50.0%
AAGATTGAGTGCGGTGTACG+TGG + chr3_1:56203314-56203333 Msa0363620:intron 50.0%
GTGGCCAGAGAATCACGATT+TGG + chr3_1:56203499-56203518 Msa0363620:intron 50.0%
CGGACCAAATCGTGATTCTC+TGG - chr3_1:56203506-56203525 None:intergenic 50.0%
! GTACAGCAAATTGGTGCTCG+CGG - chr3_1:56203526-56203545 None:intergenic 50.0%
TTGACCTGAACTGCCTGCAA+AGG - chr3_1:56204706-56204725 None:intergenic 50.0%
!!! TGCCAAGCTGACGGACTTTT+TGG + chr3_1:56205200-56205219 Msa0363620:CDS 50.0%
CACAGTTGTGGTTGCATGAG+GGG - chr3_1:56205229-56205248 None:intergenic 50.0%
CCACAGTTGTGGTTGCATGA+GGG - chr3_1:56205230-56205249 None:intergenic 50.0%
ACCACAGTTGTGGTTGCATG+AGG - chr3_1:56205231-56205250 None:intergenic 50.0%
! AGTCAAGCAAGAAGCGTAGG+CGG + chr3_1:56205382-56205401 Msa0363620:intron 50.0%
CTGTCAAACGAGGTACACCA+AGG + chr3_1:56205406-56205425 Msa0363620:CDS 50.0%
AAACGAGGTACACCAAGGTC+TGG + chr3_1:56205411-56205430 Msa0363620:CDS 50.0%
CTATGCAGATGGCCATTGCA+TGG + chr3_1:56205722-56205741 Msa0363620:intron 50.0%
! TGGCCATTGCATGGCGTTTT+AGG + chr3_1:56205731-56205750 Msa0363620:intron 50.0%
! GGCCATTGCATGGCGTTTTA+GGG + chr3_1:56205732-56205751 Msa0363620:intron 50.0%
AGCCCTAAAACGCCATGCAA+TGG - chr3_1:56205737-56205756 None:intergenic 50.0%
CAGCTACTACTGTGATGGCA+CGG + chr3_1:56205823-56205842 Msa0363620:intron 50.0%
!! TCCCCGGCGTTTTTGCTTTT+TGG + chr3_1:56205885-56205904 Msa0363620:intron 50.0%
! GGCTTTGTCACAAGCAGAGA+AGG - chr3_1:56205970-56205989 None:intergenic 50.0%
AAACCGGCCGTAGATTGAAC+TGG + chr3_1:56206000-56206019 Msa0363620:intron 50.0%
ACACCAGTTCAATCTACGGC+CGG - chr3_1:56206006-56206025 None:intergenic 50.0%
TGACCAGGTCATGGTTCAAC+TGG + chr3_1:56206025-56206044 Msa0363620:intron 50.0%
CAACCAGTTGAACCATGACC+TGG - chr3_1:56206031-56206050 None:intergenic 50.0%
!! CGGTGTAGTGGGTAGAAGTA+TGG - chr3_1:56206215-56206234 None:intergenic 50.0%
ATGCAGACAACCAGCATGTG+CGG - chr3_1:56206235-56206254 None:intergenic 50.0%
CTCACACCTACTGAGTGAAC+AGG + chr3_1:56206291-56206310 Msa0363620:intron 50.0%
GAGCTACTTCCTCCAATGGT+TGG - chr3_1:56206747-56206766 None:intergenic 50.0%
TATCTCCCATGACTGGGCAA+CGG + chr3_1:56206801-56206820 Msa0363620:CDS 50.0%
GTGCCAGCTCATAACCTGAT+CGG + chr3_1:56207265-56207284 Msa0363620:intron 50.0%
TTAGGTGCTCTCTTAGGTGG+TGG - chr3_1:56207773-56207792 None:intergenic 50.0%
CTGATCATCTGAGGGACTTG+AGG - chr3_1:56208218-56208237 None:intergenic 50.0%
AACAACGCCCCAGTCAATGA+AGG - chr3_1:56208386-56208405 None:intergenic 50.0%
!! ATTGACTGGGGCGTTGTTGT+TGG + chr3_1:56208388-56208407 Msa0363620:intron 50.0%
ACGTCTTGACCAACCAAGGT+TGG + chr3_1:56209051-56209070 Msa0363620:intron 50.0%
CGTCTTGACCAACCAAGGTT+GGG + chr3_1:56209052-56209071 Msa0363620:intron 50.0%
AAGCTAGACCCAACCTTGGT+TGG - chr3_1:56209063-56209082 None:intergenic 50.0%
AACCAAGGTTGGGTCTAGCT+TGG + chr3_1:56209062-56209081 Msa0363620:intron 50.0%
! ACCAAGGTTGGGTCTAGCTT+GGG + chr3_1:56209063-56209082 Msa0363620:intron 50.0%
ACCAAGGTTCAAACGTCGGT+TGG + chr3_1:56209109-56209128 Msa0363620:intron 50.0%
! CCAAGGTTCAAACGTCGGTT+GGG + chr3_1:56209110-56209129 Msa0363620:intron 50.0%
TGAAGAAGCAGATGAGTCCG+AGG + chr3_1:56209343-56209362 Msa0363620:CDS 50.0%
TGAGTCCGAGGAAGATGAAG+AGG + chr3_1:56209355-56209374 Msa0363620:CDS 50.0%
GTTCAAATCCCCTTACGGGC+CGG + chr3_1:56201197-56201216 Msa0363620:intron 55.0%
TGGCGTGAAAGAAGCAGTGG+AGG + chr3_1:56202153-56202172 Msa0363620:CDS 55.0%
AACTGAAGCAGAGACGGAGG+AGG + chr3_1:56202447-56202466 Msa0363620:CDS 55.0%
CCACGGCCCTGCAAATTGAA+AGG - chr3_1:56202820-56202839 None:intergenic 55.0%
CCTTTCAATTTGCAGGGCCG+TGG + chr3_1:56202817-56202836 Msa0363620:intron 55.0%
CCTTCCCTCTCCTTCCAAAG+AGG - chr3_1:56204455-56204474 None:intergenic 55.0%
! CCTCTTTGGAAGGAGAGGGA+AGG + chr3_1:56204452-56204471 Msa0363620:CDS 55.0%
CCTAAATATCGCAGGCTCGC+AGG - chr3_1:56204632-56204651 None:intergenic 55.0%
CCTGCGAGCCTGCGATATTT+AGG + chr3_1:56204629-56204648 Msa0363620:intron 55.0%
CCCTCATGCAACCACAACTG+TGG + chr3_1:56205227-56205246 Msa0363620:CDS 55.0%
GAGGTACACCAAGGTCTGGT+GGG + chr3_1:56205415-56205434 Msa0363620:CDS 55.0%
AGGTACACCAAGGTCTGGTG+GGG + chr3_1:56205416-56205435 Msa0363620:CDS 55.0%
! GGTGGGGCTAGTACTTCAAG+AGG + chr3_1:56205432-56205451 Msa0363620:CDS 55.0%
!!! GCATGGCGTTTTAGGGCTGT+AGG + chr3_1:56205739-56205758 Msa0363620:intron 55.0%
GAACTGGTGTGACCAGGTCA+TGG + chr3_1:56206016-56206035 Msa0363620:intron 55.0%
ACCAGCATGTGCGGTGTAGT+GGG - chr3_1:56206226-56206245 None:intergenic 55.0%
AACCAGCATGTGCGGTGTAG+TGG - chr3_1:56206227-56206246 None:intergenic 55.0%
! GCACATGCTGGTTGTCTGCA+TGG + chr3_1:56206234-56206253 Msa0363620:intron 55.0%
! ATGGCTCTGCTATCCGCAAC+TGG + chr3_1:56206253-56206272 Msa0363620:intron 55.0%
ATGCTCCGTTGCCCAGTCAT+GGG - chr3_1:56206809-56206828 None:intergenic 55.0%
CTGCCGATCAGGTTATGAGC+TGG - chr3_1:56207271-56207290 None:intergenic 55.0%
! CCAAGGTTGGGTCTAGCTTG+GGG + chr3_1:56209064-56209083 Msa0363620:intron 55.0%
CCCAACCGACGTTTGAACCT+TGG - chr3_1:56209113-56209132 None:intergenic 55.0%
GTCCGAGGAAGATGAAGAGG+AGG + chr3_1:56209358-56209377 Msa0363620:CDS 55.0%
!! GTGCAGCCTTTTGGTTGGGT+TGG + chr3_1:56209594-56209613 Msa0363620:three_prime_UTR 55.0%
TGGCAGCCAACCCAACCAAA+AGG - chr3_1:56209603-56209622 None:intergenic 55.0%
TGAAGCAGAGACGGAGGAGG+AGG + chr3_1:56202450-56202469 Msa0363620:CDS 60.0%
CGCACTGGGCGATCACTAGT+TGG - chr3_1:56202643-56202662 None:intergenic 60.0%
GTGATCGCCCAGTGCGAGAA+AGG + chr3_1:56202647-56202666 Msa0363620:CDS 60.0%
GGGCCGTGGCACACCTTTAA+AGG + chr3_1:56202831-56202850 Msa0363620:intron 60.0%
GGCATGCGCTGTTGCTGTCT+TGG + chr3_1:56203342-56203361 Msa0363620:intron 60.0%
CGCTGTTGCTGTCTTGGCAG+TGG + chr3_1:56203348-56203367 Msa0363620:intron 60.0%
!! CGTAGGCGGACTGTCAAACG+AGG + chr3_1:56205396-56205415 Msa0363620:CDS 60.0%
CGAGGTACACCAAGGTCTGG+TGG + chr3_1:56205414-56205433 Msa0363620:CDS 60.0%
GTACTAGCCCCACCAGACCT+TGG - chr3_1:56205426-56205445 None:intergenic 60.0%
ACCCACTACACCGCACATGC+TGG + chr3_1:56206222-56206241 Msa0363620:intron 60.0%
CATGCTCCGTTGCCCAGTCA+TGG - chr3_1:56206810-56206829 None:intergenic 60.0%
AGGGGAGGAGAGCTAGCTCA+TGG - chr3_1:56207955-56207974 None:intergenic 60.0%
!! GACTGGGGCGTTGTTGTTGG+TGG + chr3_1:56208391-56208410 Msa0363620:intron 60.0%
CCCCAAGCTAGACCCAACCT+TGG - chr3_1:56209067-56209086 None:intergenic 60.0%
GGGGCCAGTCTCCCATACTA+TGG + chr3_1:56209083-56209102 Msa0363620:intron 60.0%
AGCAGAGACGGAGGAGGAGG+AGG + chr3_1:56202453-56202472 Msa0363620:CDS 65.0%
AGAGACGGAGGAGGAGGAGG+AGG + chr3_1:56202456-56202475 Msa0363620:CDS 65.0%
AGTGCGGTGTACGTGGCTGC+TGG + chr3_1:56203321-56203340 Msa0363620:intron 65.0%
GACGGAGGAGGAGGAGGAGG+AGG + chr3_1:56202459-56202478 Msa0363620:CDS 70.0%
GGAGGAGGAGGAGGAGGAGG+AGG + chr3_1:56202462-56202481 Msa0363620:CDS 70.0%
GGAGGAGGAGGAGGAGGAGG+AGG + chr3_1:56202462-56202481 Msa0363620:CDS 70.0%
GGAGGAGGAGGAGGACGACG+AGG + chr3_1:56202474-56202493 Msa0363620:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 56200603 56209782 56200603 ID=Msa0363620;Name=Msa0363620
chr3_1 mRNA 56200603 56209782 56200603 ID=Msa0363620-mRNA-1;Parent=Msa0363620;Name=Msa0363620-mRNA-1;_AED=0.11;_eAED=0.11;_QI=160|0.75|0.84|0.92|0.91|0.84|13|373|866
chr3_1 exon 56200603 56200698 56200603 ID=Msa0363620-mRNA-1:exon:10312;Parent=Msa0363620-mRNA-1
chr3_1 exon 56201499 56202735 56201499 ID=Msa0363620-mRNA-1:exon:10313;Parent=Msa0363620-mRNA-1
chr3_1 exon 56202832 56202865 56202832 ID=Msa0363620-mRNA-1:exon:10314;Parent=Msa0363620-mRNA-1
chr3_1 exon 56204394 56204473 56204394 ID=Msa0363620-mRNA-1:exon:10315;Parent=Msa0363620-mRNA-1
chr3_1 exon 56204712 56204771 56204712 ID=Msa0363620-mRNA-1:exon:10316;Parent=Msa0363620-mRNA-1
chr3_1 exon 56204979 56205086 56204979 ID=Msa0363620-mRNA-1:exon:10317;Parent=Msa0363620-mRNA-1
chr3_1 exon 56205189 56205266 56205189 ID=Msa0363620-mRNA-1:exon:10318;Parent=Msa0363620-mRNA-1
chr3_1 exon 56205384 56205464 56205384 ID=Msa0363620-mRNA-1:exon:10319;Parent=Msa0363620-mRNA-1
chr3_1 exon 56206697 56206828 56206697 ID=Msa0363620-mRNA-1:exon:10320;Parent=Msa0363620-mRNA-1
chr3_1 exon 56207470 56208037 56207470 ID=Msa0363620-mRNA-1:exon:10321;Parent=Msa0363620-mRNA-1
chr3_1 exon 56208176 56208285 56208176 ID=Msa0363620-mRNA-1:exon:10322;Parent=Msa0363620-mRNA-1
chr3_1 exon 56208483 56208513 56208483 ID=Msa0363620-mRNA-1:exon:10323;Parent=Msa0363620-mRNA-1
chr3_1 exon 56209264 56209782 56209264 ID=Msa0363620-mRNA-1:exon:10324;Parent=Msa0363620-mRNA-1
chr3_1 five_prime_UTR 56200603 56200698 56200603 ID=Msa0363620-mRNA-1:five_prime_utr;Parent=Msa0363620-mRNA-1
chr3_1 five_prime_UTR 56201499 56201562 56201499 ID=Msa0363620-mRNA-1:five_prime_utr;Parent=Msa0363620-mRNA-1
chr3_1 CDS 56201563 56202735 56201563 ID=Msa0363620-mRNA-1:cds;Parent=Msa0363620-mRNA-1
chr3_1 CDS 56202832 56202865 56202832 ID=Msa0363620-mRNA-1:cds;Parent=Msa0363620-mRNA-1
chr3_1 CDS 56204394 56204473 56204394 ID=Msa0363620-mRNA-1:cds;Parent=Msa0363620-mRNA-1
chr3_1 CDS 56204712 56204771 56204712 ID=Msa0363620-mRNA-1:cds;Parent=Msa0363620-mRNA-1
chr3_1 CDS 56204979 56205086 56204979 ID=Msa0363620-mRNA-1:cds;Parent=Msa0363620-mRNA-1
chr3_1 CDS 56205189 56205266 56205189 ID=Msa0363620-mRNA-1:cds;Parent=Msa0363620-mRNA-1
chr3_1 CDS 56205384 56205464 56205384 ID=Msa0363620-mRNA-1:cds;Parent=Msa0363620-mRNA-1
chr3_1 CDS 56206697 56206828 56206697 ID=Msa0363620-mRNA-1:cds;Parent=Msa0363620-mRNA-1
chr3_1 CDS 56207470 56208037 56207470 ID=Msa0363620-mRNA-1:cds;Parent=Msa0363620-mRNA-1
chr3_1 CDS 56208176 56208285 56208176 ID=Msa0363620-mRNA-1:cds;Parent=Msa0363620-mRNA-1
chr3_1 CDS 56208483 56208513 56208483 ID=Msa0363620-mRNA-1:cds;Parent=Msa0363620-mRNA-1
chr3_1 CDS 56209264 56209409 56209264 ID=Msa0363620-mRNA-1:cds;Parent=Msa0363620-mRNA-1
chr3_1 three_prime_UTR 56209410 56209782 56209410 ID=Msa0363620-mRNA-1:three_prime_utr;Parent=Msa0363620-mRNA-1
Gene Sequence

>Msa0363620

ATGGGTGAGGAAGAAGTAGTGGCTGAAGTTTCTAAGACTGATTCAAATGGAGGTAGCGTTCCGGTGAAATCATTGGGGGATGTTGTTGAGAAGAAAGACTTGGAAACTGATGGAGGGAAAGTTTTGGAGAGTAATGGAGTCAAAGAGGTGAAAGAAAATGATGTAAAAGAAATTGAAGAAGATAAGAAAGTTGAGGGTGTGGAAAAGGTACAAGAGGATAAGAAAGATGAAGATGGGGTGGGAGAAGTAAAAGAGGATAAGAAAGCCGATGGGGGCGATGAAGTAAAAGAGGATAAGAAAAATGATGGAGTGGAAGAAGTAAAAGATGACAAGAAAGACAATGTAGCTGATGAAGTAAAAGAGGATAAGAAAGATGATGTGGGAGAAGTAAAAGAGGATAAGAAAGACGATGCGGTGGAAGAAGTGAAAGAGGAGAAGAAAGATGATGGGGCTGATGAAGTAAAAGAGGAGAAGAAAGATGATGGGGTGGAAGAAGTAAAAGATGATAAGGAAGTTGATGGTGCAGATGAAGTAAAGGTGGAAAAGAAAGATAATGAGGGGGAAGAAGTAAAAGATGATATGGAAGTTGATGGCGTGAAAGAAGCAGTGGAGGATAAGAATGATGGTGACATCCAAGAAATGGAAGAGGATGACAAAAATGTTCCTGAATCTGAGAATGAGAAAATGGATGTTGATGCTGAGGTTAAGGAAACTACAGAAGATAAAGAAGAAAAGGAAAAAGAAGATGCAGAGGGTAGCATTGAGGAGAAAGAAGAGGGTAATGATGAGGAGAAAACTGAAGTAGAGGAGAAGGAAGAAGGCGATGACAATGAGAAATCTGAAGAAGAGACAGAGGAGAAGGAAGAGGGCGATGAAAAGGAGAAAACTGAAGCAGAGACGGAGGAGGAGGAGGAGGAGGAGGAGGACGACGAGGATACTATTGATAAATCAAAAGAAGAAGATAAGGCAGAGGGTAGTAAGGCTGAGAAAGGATCAAAAAAGCGTGCCAGAGGGAAGGTTAATGAGGAGAAAGTGAAAGACAAAAAGAAGGAACTGAAGCAGCCAGAGCCAAAGACTCCAACTAGTGATCGCCCAGTGCGAGAAAGGAAATCAGTTGAGAGATTGGTAGCATTAATCGATAAAGATGCAACCAAGGAATTACACATCGCAAAGGGCCGTGGCACACCTTTAAAGGATATACCCAATGTGGCATTTAAGTTATCCAGAAGGAAGACTGATGACAGTCTCAAGTTGTTCCATACAATCCTCTTTGGAAGGAGAGGGAAGGCAGTTCAGGTCAAGAGTAATATATTGAGGTTTTCTGGTTTTGTATGGCATGACAATGAGGAGAAGCAAATGCTTAAAGTAAAAGAAAAGCTAGACAGGTGTAATAAAGAGAAGTTACTGGAATTCTGCGATGTGCTTGACATAACAATTACCAAGTCAACAACAAAGGAAGATATTATTGCCAAGCTGACGGACTTTTTGGTTGCCCCTCATGCAACCACAACTGTGGTACTTGCAGATAAAGAGTCAAGCAAGAAGCGTAGGCGGACTGTCAAACGAGGTACACCAAGGTCTGGTGGGGCTAGTACTTCAAGAGGTTCTGGAAAGTCATTTTTGGGAGGCGCTAAGCTTATAGACTTTAGAGCAAATAGGCACCAACCATTGGAGGAAGTAGCTCATAGGAACAAGGAGCCTATAAAAGCTCCAAAGCTTATCTCCCATGACTGGGCAACGGAGCATAGGCAGAAGAAAAATGAAGATTCTGCAGGAGTGGAGAAAAAGAGCACAACTGACACAGAAGATGAATCAGAGGGAGAAGAGAAAAATGAAGAAAATGAGGATGAACCTGAAAATGATATTCCTGAGAAATCTGAAGATGAAACGCCACAGAAATCTGAAAGGGAAGATAAGAGTGATTCTGGGAGTGAATCTGAAGATGTGAAAAAAAGGAAAAGACCCTCCAAAACATCATCTGCAAAGAAAGAGTCCTCTGGAAGAAGCAAAGTTGAGAAAACTACGGTCACGAATAAATCTCGCTCACCACCACCTAAGAGAGCACCTAAGAAATCATCAAATACCAGACCAAAGTCTGATGATGATATTGATGAAAGTCCAAAGGTATTTTCTAGGAAGAAGAAAAGTGAGCAAGGGGGAAAGCAGAAGATATCAACTCCAACTCCAACCAAGTCTTCCTTAAAGTCCAAAGAGAAAACTGGTAGATGCCATGAGCTAGCTCTCCTCCCCTCTTGTCATTATTTCATTTACGAACGTTCTGAATCTACTGCCTATTGCGATTTAGTTGAGAATAAGAAGGTTACTAAGGGAAAAGGCAAGAAGAAAGTGACGTCCTCAAGTCCCTCAGATGATCAGTTGCGTGATGCAATATGTGAAATTCTTAAAGAAGTTGACTTCAATACGGCCACATTTACCGACATTCTGAAACTACTTGCTAACAAATTTGATGTGGATCTCACCCCAAAAAAGTCAGCTATCAAGCTCATGATTCAGAAAGAGCTGGCAAGACTTGCTGAAGAAGCAGATGAGTCCGAGGAAGATGAAGAGGAGGATGCCGAGAAAGATGAAGACCGGTCTTAA
Protein sequence

>Msa0363620

MGEEEVVAEVSKTDSNGGSVPVKSLGDVVEKKDLETDGGKVLESNGVKEVKENDVKEIEEDKKVEGVEKVQEDKKDEDGVGEVKEDKKADGGDEVKEDKKNDGVEEVKDDKKDNVADEVKEDKKDDVGEVKEDKKDDAVEEVKEEKKDDGADEVKEEKKDDGVEEVKDDKEVDGADEVKVEKKDNEGEEVKDDMEVDGVKEAVEDKNDGDIQEMEEDDKNVPESENEKMDVDAEVKETTEDKEEKEKEDAEGSIEEKEEGNDEEKTEVEEKEEGDDNEKSEEETEEKEEGDEKEKTEAETEEEEEEEEDDEDTIDKSKEEDKAEGSKAEKGSKKRARGKVNEEKVKDKKKELKQPEPKTPTSDRPVRERKSVERLVALIDKDATKELHIAKGRGTPLKDIPNVAFKLSRRKTDDSLKLFHTILFGRRGKAVQVKSNILRFSGFVWHDNEEKQMLKVKEKLDRCNKEKLLEFCDVLDITITKSTTKEDIIAKLTDFLVAPHATTTVVLADKESSKKRRRTVKRGTPRSGGASTSRGSGKSFLGGAKLIDFRANRHQPLEEVAHRNKEPIKAPKLISHDWATEHRQKKNEDSAGVEKKSTTDTEDESEGEEKNEENEDEPENDIPEKSEDETPQKSEREDKSDSGSESEDVKKRKRPSKTSSAKKESSGRSKVEKTTVTNKSRSPPPKRAPKKSSNTRPKSDDDIDESPKVFSRKKKSEQGGKQKISTPTPTKSSLKSKEKTGRCHELALLPSCHYFIYERSESTAYCDLVENKKVTKGKGKKKVTSSSPSDDQLRDAICEILKEVDFNTATFTDILKLLANKFDVDLTPKKSAIKLMIQKELARLAEEADESEEDEEEDAEKDEDRS*