Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0099730 | XP_013465872.1 | 98.658 | 149 | 2 | 0 | 80 | 228 | 1 | 149 | 2.19e-102 | 303 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0099730 | A0A072VER7 | 98.658 | 149 | 2 | 0 | 80 | 228 | 1 | 149 | 1.04e-102 | 303 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0099730 | -0.825962 | 3.521098e-54 | -8.615850e-47 |
| Msa0005350 | Msa0099730 | 0.997390 | 1.089440e-241 | -8.615850e-47 |
| Msa0006700 | Msa0099730 | 0.822425 | 2.385164e-53 | -8.615850e-47 |
| Msa0008850 | Msa0099730 | 0.818110 | 2.325615e-52 | -8.615850e-47 |
| Msa0011720 | Msa0099730 | 0.824162 | 9.370668e-54 | -8.615850e-47 |
| Msa0017120 | Msa0099730 | 0.804702 | 1.903151e-49 | -8.615850e-47 |
| Msa0030030 | Msa0099730 | 0.810518 | 1.107504e-50 | -8.615850e-47 |
| Msa0047470 | Msa0099730 | 0.822854 | 1.895482e-53 | -8.615850e-47 |
| Msa0050730 | Msa0099730 | 0.821558 | 3.788827e-53 | -8.615850e-47 |
| Msa0050760 | Msa0099730 | 0.818691 | 1.717362e-52 | -8.615850e-47 |
| Msa0053900 | Msa0099730 | 0.964573 | 1.692979e-123 | -8.615850e-47 |
| Msa0055280 | Msa0099730 | 0.830008 | 3.738941e-55 | -8.615850e-47 |
| Msa0060600 | Msa0099730 | 0.842053 | 3.271002e-58 | -8.615850e-47 |
| Msa0069260 | Msa0099730 | 0.815341 | 9.715535e-52 | -8.615850e-47 |
| Msa0069280 | Msa0099730 | 0.808151 | 3.565751e-50 | -8.615850e-47 |
| Msa0069310 | Msa0099730 | 0.817187 | 3.754690e-52 | -8.615850e-47 |
| Msa0071550 | Msa0099730 | 0.813477 | 2.510101e-51 | -8.615850e-47 |
| Msa0071910 | Msa0099730 | -0.824484 | 7.873734e-54 | -8.615850e-47 |
| Msa0079250 | Msa0099730 | 0.805471 | 1.313674e-49 | -8.615850e-47 |
| Msa0099730 | Msa0101060 | 0.846074 | 2.729162e-59 | -8.615850e-47 |
| Msa0099730 | Msa0105340 | 0.846209 | 2.508230e-59 | -8.615850e-47 |
| Msa0099730 | Msa0105420 | 0.807721 | 4.402632e-50 | -8.615850e-47 |
| Msa0099730 | Msa0120340 | 0.830367 | 3.056214e-55 | -8.615850e-47 |
| Msa0099730 | Msa0137040 | 0.814868 | 1.237142e-51 | -8.615850e-47 |
| Msa0099730 | Msa0139720 | -0.837932 | 3.880758e-57 | -8.615850e-47 |
| Msa0099730 | Msa0143080 | 0.819976 | 8.753115e-53 | -8.615850e-47 |
| Msa0099730 | Msa0148340 | 0.834194 | 3.450608e-56 | -8.615850e-47 |
| Msa0099730 | Msa0148360 | 0.965065 | 4.003568e-124 | -8.615850e-47 |
| Msa0099730 | Msa0151690 | 0.822694 | 2.064900e-53 | -8.615850e-47 |
| Msa0099730 | Msa0165470 | 0.802139 | 6.465692e-49 | -8.615850e-47 |
| Msa0099730 | Msa0169960 | 0.828910 | 6.913288e-55 | -8.615850e-47 |
| Msa0099730 | Msa0172350 | 0.811526 | 6.698395e-51 | -8.615850e-47 |
| Msa0099730 | Msa0194970 | 0.804589 | 2.009358e-49 | -8.615850e-47 |
| Msa0099730 | Msa0197940 | -0.810249 | 1.266063e-50 | -8.615850e-47 |
| Msa0099730 | Msa0203180 | 0.822735 | 2.020815e-53 | -8.615850e-47 |
| Msa0099730 | Msa0203640 | 0.806538 | 7.836007e-50 | -8.615850e-47 |
| Msa0099730 | Msa0223100 | 0.849763 | 2.624455e-60 | -8.615850e-47 |
| Msa0099730 | Msa0223290 | 0.853389 | 2.467971e-61 | -8.615850e-47 |
| Msa0099730 | Msa0223380 | 0.840182 | 1.014472e-57 | -8.615850e-47 |
| Msa0099730 | Msa0236440 | 0.824675 | 7.097298e-54 | -8.615850e-47 |
| Msa0099730 | Msa0236980 | 0.817777 | 2.765707e-52 | -8.615850e-47 |
| Msa0099730 | Msa0243690 | 0.820121 | 8.106208e-53 | -8.615850e-47 |
| Msa0099730 | Msa0252180 | 0.822391 | 2.428840e-53 | -8.615850e-47 |
| Msa0099730 | Msa0253370 | 0.806461 | 8.133655e-50 | -8.615850e-47 |
| Msa0099730 | Msa0265210 | 0.818855 | 1.576434e-52 | -8.615850e-47 |
| Msa0099730 | Msa0267760 | 0.803441 | 3.480516e-49 | -8.615850e-47 |
| Msa0099730 | Msa0271040 | 0.801466 | 8.885008e-49 | -8.615850e-47 |
| Msa0099730 | Msa0277280 | -0.802232 | 6.187027e-49 | -8.615850e-47 |
| Msa0099730 | Msa0277530 | 0.834717 | 2.549994e-56 | -8.615850e-47 |
| Msa0099730 | Msa0279210 | -0.808549 | 2.933305e-50 | -8.615850e-47 |
| Msa0099730 | Msa0282170 | 0.829744 | 4.338067e-55 | -8.615850e-47 |
| Msa0099730 | Msa0284870 | 0.835464 | 1.652954e-56 | -8.615850e-47 |
| Msa0099730 | Msa0288240 | 0.835173 | 1.957641e-56 | -8.615850e-47 |
| Msa0099730 | Msa0288320 | 0.821751 | 3.418256e-53 | -8.615850e-47 |
| Msa0099730 | Msa0288330 | 0.810251 | 1.264637e-50 | -8.615850e-47 |
| Msa0099730 | Msa0292180 | 0.834052 | 3.746027e-56 | -8.615850e-47 |
| Msa0099730 | Msa0302650 | 0.832521 | 9.017486e-56 | -8.615850e-47 |
| Msa0099730 | Msa0304700 | 0.812058 | 5.131557e-51 | -8.615850e-47 |
| Msa0099730 | Msa0306130 | 0.825918 | 3.606011e-54 | -8.615850e-47 |
| Msa0099730 | Msa0307110 | 0.807494 | 4.919364e-50 | -8.615850e-47 |
| Msa0099730 | Msa0309350 | 0.804896 | 1.733557e-49 | -8.615850e-47 |
| Msa0099730 | Msa0312310 | 0.807462 | 4.996411e-50 | -8.615850e-47 |
| Msa0099730 | Msa0323630 | 0.819682 | 1.021515e-52 | -8.615850e-47 |
| Msa0099730 | Msa0323640 | 0.828187 | 1.033256e-54 | -8.615850e-47 |
| Msa0099730 | Msa0326670 | 0.836289 | 1.021208e-56 | -8.615850e-47 |
| Msa0099730 | Msa0328210 | 0.829986 | 3.786893e-55 | -8.615850e-47 |
| Msa0099730 | Msa0339870 | 0.837144 | 6.182661e-57 | -8.615850e-47 |
| Msa0099730 | Msa0340550 | 0.804456 | 2.141092e-49 | -8.615850e-47 |
| Msa0099730 | Msa0377530 | 0.823937 | 1.058247e-53 | -8.615850e-47 |
| Msa0099730 | Msa0389810 | 0.822094 | 2.846710e-53 | -8.615850e-47 |
| Msa0099730 | Msa0419620 | -0.827680 | 1.368655e-54 | -8.615850e-47 |
| Msa0099730 | Msa0419640 | -0.840925 | 6.481053e-58 | -8.615850e-47 |
| Msa0099730 | Msa0426810 | 0.834808 | 2.419187e-56 | -8.615850e-47 |
| Msa0099730 | Msa0431520 | 0.807280 | 5.458721e-50 | -8.615850e-47 |
| Msa0099730 | Msa0431830 | 0.830409 | 2.985690e-55 | -8.615850e-47 |
| Msa0099730 | Msa0449760 | 0.840417 | 8.808397e-58 | -8.615850e-47 |
| Msa0099730 | Msa0464900 | 0.819500 | 1.124051e-52 | -8.615850e-47 |
| Msa0099730 | Msa0465670 | -0.811497 | 6.796404e-51 | -8.615850e-47 |
| Msa0099730 | Msa0466060 | 0.800213 | 1.601542e-48 | -8.615850e-47 |
| Msa0099730 | Msa0467800 | 0.817985 | 2.481821e-52 | -8.615850e-47 |
| Msa0099730 | Msa0467880 | 0.814716 | 1.337274e-51 | -8.615850e-47 |
| Msa0099730 | Msa0468130 | 0.825895 | 3.651998e-54 | -8.615850e-47 |
| Msa0099730 | Msa0473240 | 0.854329 | 1.323720e-61 | -8.615850e-47 |
| Msa0099730 | Msa0482190 | -0.830890 | 2.276032e-55 | -8.615850e-47 |
| Msa0099730 | Msa0482680 | 0.823384 | 1.425990e-53 | -8.615850e-47 |
| Msa0099730 | Msa0485500 | -0.830160 | 3.433180e-55 | -8.615850e-47 |
| Msa0099730 | Msa0490300 | 0.810570 | 1.079481e-50 | -8.615850e-47 |
| Msa0099730 | Msa0511720 | -0.836549 | 8.768988e-57 | -8.615850e-47 |
| Msa0099730 | Msa0517490 | 0.820727 | 5.887604e-53 | -8.615850e-47 |
| Msa0099730 | Msa0535030 | 0.800385 | 1.477355e-48 | -8.615850e-47 |
| Msa0099730 | Msa0535060 | 0.806492 | 8.011038e-50 | -8.615850e-47 |
| Msa0099730 | Msa0556240 | 0.801526 | 8.636337e-49 | -8.615850e-47 |
| Msa0099730 | Msa0575470 | 0.803729 | 3.033532e-49 | -8.615850e-47 |
| Msa0099730 | Msa0576600 | 0.840445 | 8.659306e-58 | -8.615850e-47 |
| Msa0099730 | Msa0578970 | 0.809932 | 1.481749e-50 | -8.615850e-47 |
| Msa0099730 | Msa0579340 | 0.807444 | 5.038997e-50 | -8.615850e-47 |
| Msa0099730 | Msa0583790 | 0.806653 | 7.410273e-50 | -8.615850e-47 |
| Msa0099730 | Msa0587690 | 0.802825 | 4.667453e-49 | -8.615850e-47 |
| Msa0099730 | Msa0590660 | 0.820372 | 7.102850e-53 | -8.615850e-47 |
| Msa0099730 | Msa0591770 | 0.808977 | 2.375516e-50 | -8.615850e-47 |
| Msa0099730 | Msa0599580 | 0.838569 | 2.661097e-57 | -8.615850e-47 |
| Msa0099730 | Msa0610370 | 0.801423 | 9.068727e-49 | -8.615850e-47 |
| Msa0099730 | Msa0610590 | 0.812757 | 3.610274e-51 | -8.615850e-47 |
| Msa0099730 | Msa0611550 | 0.815062 | 1.120575e-51 | -8.615850e-47 |
| Msa0099730 | Msa0617830 | 0.855490 | 6.094188e-62 | -8.615850e-47 |
| Msa0099730 | Msa0618010 | 0.809814 | 1.570847e-50 | -8.615850e-47 |
| Msa0099730 | Msa0620640 | 0.839242 | 1.781422e-57 | -8.615850e-47 |
| Msa0099730 | Msa0621890 | 0.813413 | 2.591534e-51 | -8.615850e-47 |
| Msa0099730 | Msa0622340 | 0.852297 | 5.062577e-61 | -8.615850e-47 |
| Msa0099730 | Msa0630970 | 0.811903 | 5.546782e-51 | -8.615850e-47 |
| Msa0099730 | Msa0651190 | 0.813117 | 3.010933e-51 | -8.615850e-47 |
| Msa0099730 | Msa0651790 | 0.838136 | 3.440021e-57 | -8.615850e-47 |
| Msa0099730 | Msa0654060 | 0.818690 | 1.718862e-52 | -8.615850e-47 |
| Msa0099730 | Msa0656270 | 0.833662 | 4.687453e-56 | -8.615850e-47 |
| Msa0099730 | Msa0656680 | 0.825604 | 4.281397e-54 | -8.615850e-47 |
| Msa0099730 | Msa0662850 | 0.802858 | 4.594939e-49 | -8.615850e-47 |
| Msa0099730 | Msa0665910 | -0.811205 | 7.866581e-51 | -8.615850e-47 |
| Msa0099730 | Msa0669200 | 0.819954 | 8.852705e-53 | -8.615850e-47 |
| Msa0099730 | Msa0669850 | 0.810751 | 9.866021e-51 | -8.615850e-47 |
| Msa0099730 | Msa0694250 | 0.847692 | 9.843835e-60 | -8.615850e-47 |
| Msa0099730 | Msa0700070 | 0.839301 | 1.720188e-57 | -8.615850e-47 |
| Msa0099730 | Msa0714340 | 0.805222 | 1.481210e-49 | -8.615850e-47 |
| Msa0099730 | Msa0714600 | 0.817933 | 2.549826e-52 | -8.615850e-47 |
| Msa0099730 | Msa0718470 | 0.814376 | 1.590003e-51 | -8.615850e-47 |
| Msa0099730 | Msa0721150 | 0.800634 | 1.314367e-48 | -8.615850e-47 |
| Msa0099730 | Msa0724050 | 0.814283 | 1.666937e-51 | -8.615850e-47 |
| Msa0099730 | Msa0724560 | 0.835914 | 1.271461e-56 | -8.615850e-47 |
| Msa0099730 | Msa0726610 | 0.804961 | 1.680117e-49 | -8.615850e-47 |
| Msa0099730 | Msa0726830 | 0.802244 | 6.149929e-49 | -8.615850e-47 |
| Msa0099730 | Msa0726860 | 0.803856 | 2.854466e-49 | -8.615850e-47 |
| Msa0099730 | Msa0731710 | 0.846586 | 1.979508e-59 | -8.615850e-47 |
| Msa0099730 | Msa0738850 | 0.813734 | 2.203692e-51 | -8.615850e-47 |
| Msa0099730 | Msa0738860 | 0.820003 | 8.629713e-53 | -8.615850e-47 |
| Msa0099730 | Msa0739120 | 0.806442 | 8.210786e-50 | -8.615850e-47 |
| Msa0099730 | Msa0739570 | 0.825239 | 5.223916e-54 | -8.615850e-47 |
| Msa0099730 | Msa0743260 | 0.800196 | 1.614671e-48 | -8.615850e-47 |
| Msa0099730 | Msa0748720 | 0.800741 | 1.250351e-48 | -8.615850e-47 |
| Msa0099730 | Msa0756310 | 0.807238 | 5.572182e-50 | -8.615850e-47 |
| Msa0099730 | Msa0757050 | 0.805246 | 1.464096e-49 | -8.615850e-47 |
| Msa0099730 | Msa0763880 | 0.817911 | 2.579359e-52 | -8.615850e-47 |
| Msa0099730 | Msa0763910 | 0.803075 | 4.144085e-49 | -8.615850e-47 |
| Msa0099730 | Msa0771960 | 0.830064 | 3.623317e-55 | -8.615850e-47 |
| Msa0099730 | Msa0782330 | 0.842701 | 2.201465e-58 | -8.615850e-47 |
| Msa0099730 | Msa0783270 | 0.802916 | 4.469818e-49 | -8.615850e-47 |
| Msa0099730 | Msa0788710 | 0.803252 | 3.809454e-49 | -8.615850e-47 |
| Msa0099730 | Msa0789270 | 0.817355 | 3.442827e-52 | -8.615850e-47 |
| Msa0099730 | Msa0789280 | 0.814388 | 1.580010e-51 | -8.615850e-47 |
| Msa0099730 | Msa0789290 | 0.812365 | 4.398268e-51 | -8.615850e-47 |
| Msa0099730 | Msa0789300 | 0.812230 | 4.707260e-51 | -8.615850e-47 |
| Msa0099730 | Msa0792090 | 0.805581 | 1.245874e-49 | -8.615850e-47 |
| Msa0099730 | Msa0796430 | -0.815110 | 1.093246e-51 | -8.615850e-47 |
| Msa0099730 | Msa0801100 | 0.815350 | 9.671406e-52 | -8.615850e-47 |
| Msa0099730 | Msa0834270 | -0.808828 | 2.557119e-50 | -8.615850e-47 |
| Msa0099730 | Msa0835730 | 0.817467 | 3.248899e-52 | -8.615850e-47 |
| Msa0099730 | Msa0848900 | 0.829904 | 3.964537e-55 | -8.615850e-47 |
| Msa0099730 | Msa0859530 | 0.811010 | 8.670201e-51 | -8.615850e-47 |
| Msa0099730 | Msa0860270 | 0.828478 | 8.794175e-55 | -8.615850e-47 |
| Msa0099730 | Msa0877410 | 0.828997 | 6.585154e-55 | -8.615850e-47 |
| Msa0099730 | Msa0877420 | 0.821931 | 3.104989e-53 | -8.615850e-47 |
| Msa0099730 | Msa0882510 | 0.802205 | 6.266486e-49 | -8.615850e-47 |
| Msa0099730 | Msa0891600 | -0.802233 | 6.182021e-49 | -8.615850e-47 |
| Msa0099730 | Msa0896210 | 0.800284 | 1.548913e-48 | -8.615850e-47 |
| Msa0099730 | Msa0896220 | 0.810969 | 8.850245e-51 | -8.615850e-47 |
| Msa0099730 | Msa0899230 | 0.817022 | 4.089992e-52 | -8.615850e-47 |
| Msa0099730 | Msa0900200 | 0.808754 | 2.650924e-50 | -8.615850e-47 |
| Msa0099730 | Msa0903730 | 0.822625 | 2.143107e-53 | -8.615850e-47 |
| Msa0099730 | Msa0907700 | 0.814810 | 1.274291e-51 | -8.615850e-47 |
| Msa0099730 | Msa0908170 | 0.852928 | 3.345912e-61 | -8.615850e-47 |
| Msa0099730 | Msa0910980 | -0.811562 | 6.580964e-51 | -8.615850e-47 |
| Msa0099730 | Msa0922540 | 0.826457 | 2.684981e-54 | -8.615850e-47 |
| Msa0099730 | Msa0927670 | 0.808759 | 2.645381e-50 | -8.615850e-47 |
| Msa0099730 | Msa0934830 | 0.812139 | 4.928229e-51 | -8.615850e-47 |
| Msa0099730 | Msa0946080 | 0.824467 | 7.946655e-54 | -8.615850e-47 |
| Msa0099730 | Msa0950620 | 0.804460 | 2.137512e-49 | -8.615850e-47 |
| Msa0099730 | Msa0952950 | 0.800123 | 1.670149e-48 | -8.615850e-47 |
| Msa0099730 | Msa0958020 | 0.814701 | 1.347660e-51 | -8.615850e-47 |
| Msa0099730 | Msa0960160 | 0.824833 | 6.514709e-54 | -8.615850e-47 |
| Msa0099730 | Msa0965520 | 0.814181 | 1.755908e-51 | -8.615850e-47 |
| Msa0099730 | Msa0971860 | 0.836281 | 1.025746e-56 | -8.615850e-47 |
| Msa0099730 | Msa0974530 | 0.806177 | 9.338161e-50 | -8.615850e-47 |
| Msa0099730 | Msa0978000 | 0.813759 | 2.175636e-51 | -8.615850e-47 |
| Msa0099730 | Msa0979550 | 0.823696 | 1.205428e-53 | -8.615850e-47 |
| Msa0099730 | Msa0982270 | 0.825391 | 4.808059e-54 | -8.615850e-47 |
| Msa0099730 | Msa0993530 | 0.813873 | 2.053258e-51 | -8.615850e-47 |
| Msa0099730 | Msa0996080 | 0.803716 | 3.051890e-49 | -8.615850e-47 |
| Msa0099730 | Msa0999040 | 0.815872 | 7.398333e-52 | -8.615850e-47 |
| Msa0099730 | Msa1002040 | 0.805274 | 1.444537e-49 | -8.615850e-47 |
| Msa0099730 | Msa1005410 | 0.805296 | 1.429826e-49 | -8.615850e-47 |
| Msa0099730 | Msa1010800 | 0.810333 | 1.214135e-50 | -8.615850e-47 |
| Msa0099730 | Msa1015060 | 0.807424 | 5.089684e-50 | -8.615850e-47 |
| Msa0099730 | Msa1026760 | 0.819667 | 1.029817e-52 | -8.615850e-47 |
| Msa0099730 | Msa1026790 | 0.816647 | 4.963758e-52 | -8.615850e-47 |
| Msa0099730 | Msa1037700 | -0.827224 | 1.760307e-54 | -8.615850e-47 |
| Msa0099730 | Msa1043870 | 0.817058 | 4.014155e-52 | -8.615850e-47 |
| Msa0099730 | Msa1047720 | 0.800218 | 1.597483e-48 | -8.615850e-47 |
| Msa0099730 | Msa1052390 | 0.801771 | 7.692888e-49 | -8.615850e-47 |
| Msa0099730 | Msa1053260 | 0.809017 | 2.328987e-50 | -8.615850e-47 |
| Msa0099730 | Msa1056640 | 0.801573 | 8.447852e-49 | -8.615850e-47 |
| Msa0099730 | Msa1079730 | -0.805759 | 1.143025e-49 | -8.615850e-47 |
| Msa0099730 | Msa1092090 | 0.826808 | 2.214178e-54 | -8.615850e-47 |
| Msa0099730 | Msa1092820 | 0.809671 | 1.686459e-50 | -8.615850e-47 |
| Msa0099730 | Msa1095480 | 0.835775 | 1.379225e-56 | -8.615850e-47 |
| Msa0099730 | Msa1115580 | 0.804970 | 1.672736e-49 | -8.615850e-47 |
| Msa0099730 | Msa1116150 | 0.815364 | 9.599761e-52 | -8.615850e-47 |
| Msa0099730 | Msa1118930 | 0.801260 | 9.792080e-49 | -8.615850e-47 |
| Msa0099730 | Msa1130110 | 0.809709 | 1.654807e-50 | -8.615850e-47 |
| Msa0099730 | Msa1130210 | -0.840379 | 9.011512e-58 | -8.615850e-47 |
| Msa0099730 | Msa1132560 | -0.839365 | 1.655490e-57 | -8.615850e-47 |
| Msa0099730 | Msa1142500 | 0.842584 | 2.365193e-58 | -8.615850e-47 |
| Msa0099730 | Msa1154160 | 0.803146 | 4.006884e-49 | -8.615850e-47 |
| Msa0099730 | Msa1162560 | 0.806452 | 8.168874e-50 | -8.615850e-47 |
| Msa0099730 | Msa1168040 | -0.802450 | 5.577224e-49 | -8.615850e-47 |
| Msa0099730 | Msa1205010 | -0.801502 | 8.734479e-49 | -8.615850e-47 |
| Msa0099730 | Msa1206020 | 0.800611 | 1.328737e-48 | -8.615850e-47 |
| Msa0099730 | Msa1217810 | 0.862401 | 5.203997e-64 | -8.615850e-47 |
| Msa0099730 | Msa1217830 | 0.818527 | 1.871159e-52 | -8.615850e-47 |
| Msa0099730 | Msa1218650 | 0.851034 | 1.154345e-60 | -8.615850e-47 |
| Msa0099730 | Msa1233500 | 0.809343 | 1.983451e-50 | -8.615850e-47 |
| Msa0099730 | Msa1235630 | 0.824057 | 9.917263e-54 | -8.615850e-47 |
| Msa0099730 | Msa1236070 | -0.821442 | 4.029704e-53 | -8.615850e-47 |
| Msa0099730 | Msa1236640 | -0.809248 | 2.078477e-50 | -8.615850e-47 |
| Msa0099730 | Msa1237030 | 0.805565 | 1.255636e-49 | -8.615850e-47 |
| Msa0099730 | Msa1258380 | -0.829479 | 5.031663e-55 | -8.615850e-47 |
| Msa0099730 | Msa1267260 | 0.820965 | 5.191205e-53 | -8.615850e-47 |
| Msa0099730 | Msa1282920 | 0.823344 | 1.457272e-53 | -8.615850e-47 |
| Msa0099730 | Msa1292730 | 0.810221 | 1.283805e-50 | -8.615850e-47 |
| Msa0099730 | Msa1300350 | -0.802039 | 6.778232e-49 | -8.615850e-47 |
| Msa0099730 | Msa1303160 | 0.810258 | 1.260798e-50 | -8.615850e-47 |
| Msa0099730 | Msa1307740 | 0.826073 | 3.313076e-54 | -8.615850e-47 |
| Msa0099730 | Msa1322190 | 0.831322 | 1.782192e-55 | -8.615850e-47 |
| Msa0099730 | Msa1328850 | 0.804287 | 2.322229e-49 | -8.615850e-47 |
| Msa0099730 | Msa1335720 | 0.806408 | 8.346764e-50 | -8.615850e-47 |
| Msa0099730 | Msa1362510 | 0.829259 | 5.688334e-55 | -8.615850e-47 |
| Msa0099730 | Msa1365040 | -0.810095 | 1.366805e-50 | -8.615850e-47 |
| Msa0099730 | Msa1367390 | -0.800234 | 1.585810e-48 | -8.615850e-47 |
| Msa0099730 | Msa1382930 | 0.803881 | 2.821176e-49 | -8.615850e-47 |
| Msa0099730 | Msa1385620 | 0.820251 | 7.571487e-53 | -8.615850e-47 |
| Msa0099730 | Msa1388790 | -0.811746 | 6.000825e-51 | -8.615850e-47 |
| Msa0099730 | Msa1389780 | 0.802991 | 4.314338e-49 | -8.615850e-47 |
| Msa0099730 | Msa1390310 | 0.810346 | 1.206544e-50 | -8.615850e-47 |
| Msa0099730 | Msa1397340 | 0.801617 | 8.275128e-49 | -8.615850e-47 |
| Msa0099730 | Msa1397970 | 0.806625 | 7.512330e-50 | -8.615850e-47 |
| Msa0099730 | Msa1404540 | 0.801329 | 9.476823e-49 | -8.615850e-47 |
| Msa0099730 | Msa1405470 | 0.813233 | 2.839142e-51 | -8.615850e-47 |
| Msa0099730 | Msa1412080 | 0.807721 | 4.401785e-50 | -8.615850e-47 |
| Msa0099730 | Msa1417830 | -0.802654 | 5.064245e-49 | -8.615850e-47 |
| Msa0099730 | Msa1419110 | 0.852903 | 3.400425e-61 | -8.615850e-47 |
| Msa0099730 | Msa1425010 | 0.824133 | 9.522304e-54 | -8.615850e-47 |
| Msa0099730 | Msa1427830 | 0.814983 | 1.166491e-51 | -8.615850e-47 |
| Msa0099730 | Msa1431060 | 0.801543 | 8.569536e-49 | -8.615850e-47 |
| Msa0099730 | Msa1432640 | 0.815972 | 7.030213e-52 | -8.615850e-47 |
| Msa0099730 | Msa1435760 | 0.801821 | 7.513232e-49 | -8.615850e-47 |
| Msa0099730 | Msa1439230 | 0.848672 | 5.279674e-60 | -8.615850e-47 |
| Msa0099730 | Msa1440180 | 0.810602 | 1.062203e-50 | -8.615850e-47 |
| Msa0099730 | Msa1440600 | 0.820169 | 7.906771e-53 | -8.615850e-47 |
| Msa0099730 | Msa1444250 | -0.836131 | 1.119970e-56 | -8.615850e-47 |
| Msa0099730 | Msa1444450 | 0.819090 | 1.393938e-52 | -8.615850e-47 |
| Msa0099730 | Msa1445420 | -0.807245 | 5.555051e-50 | -8.615850e-47 |
| Msa0099730 | Msa1449740 | 0.813161 | 2.944471e-51 | -8.615850e-47 |
| Msa0099730 | Msa1450020 | 0.834187 | 3.464094e-56 | -8.615850e-47 |
| Msa0099730 | Msa1454110 | 0.824900 | 6.281246e-54 | -8.615850e-47 |
| Msa0099730 | Msa1456650 | 0.808468 | 3.052118e-50 | -8.615850e-47 |
| Msa0099730 | Msa1457670 | -0.811974 | 5.351349e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0099730 | MtrunA17_Chr1g0150711 | 98.658 | 149 | 2 | 0 | 80 | 228 | 1 | 149 | 2.01e-106 | 303 |
| Msa0099730 | MtrunA17_Chr3g0136441 | 54.839 | 124 | 45 | 4 | 92 | 214 | 11 | 124 | 7.04e-36 | 123 |
| Msa0099730 | MtrunA17_Chr4g0070351 | 50.862 | 116 | 49 | 3 | 79 | 192 | 17 | 126 | 2.40e-29 | 106 |
| Msa0099730 | MtrunA17_Chr8g0344381 | 46.400 | 125 | 54 | 5 | 99 | 215 | 34 | 153 | 4.39e-29 | 107 |
| Msa0099730 | MtrunA17_Chr4g0070371 | 45.082 | 122 | 58 | 3 | 74 | 192 | 6 | 121 | 2.61e-27 | 102 |
| Msa0099730 | MtrunA17_Chr3g0140381 | 36.538 | 104 | 62 | 2 | 92 | 194 | 33 | 133 | 4.03e-17 | 75.5 |
| Msa0099730 | MtrunA17_Chr1g0205251 | 43.836 | 73 | 39 | 1 | 96 | 168 | 3 | 73 | 8.04e-17 | 73.9 |
| Msa0099730 | MtrunA17_Chr5g0394601 | 39.560 | 91 | 49 | 2 | 96 | 186 | 3 | 87 | 1.02e-16 | 73.2 |
| Msa0099730 | MtrunA17_Chr8g0340421 | 30.108 | 186 | 100 | 8 | 47 | 215 | 11 | 183 | 1.68e-16 | 74.7 |
| Msa0099730 | MtrunA17_Chr2g0331111 | 50.794 | 63 | 27 | 1 | 96 | 158 | 63 | 121 | 7.89e-15 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0099730 | AT1G72510.1 | 43.939 | 132 | 57 | 5 | 98 | 215 | 36 | 164 | 1.43e-28 | 106 |
| Msa0099730 | AT1G72510.2 | 43.939 | 132 | 57 | 5 | 98 | 215 | 36 | 164 | 1.43e-28 | 106 |
| Msa0099730 | AT5G20670.1 | 43.478 | 138 | 63 | 3 | 90 | 215 | 17 | 151 | 4.70e-27 | 102 |
| Msa0099730 | AT2G09970.1 | 37.931 | 145 | 71 | 6 | 85 | 215 | 26 | 165 | 5.31e-23 | 91.7 |
| Msa0099730 | AT1G54095.1 | 44.037 | 109 | 59 | 2 | 80 | 188 | 1 | 107 | 1.98e-19 | 82.0 |
| Msa0099730 | AT3G22540.1 | 37.500 | 120 | 59 | 5 | 92 | 210 | 2 | 106 | 6.10e-18 | 77.0 |
| Msa0099730 | AT4G14819.1 | 36.134 | 119 | 59 | 4 | 92 | 210 | 2 | 103 | 1.09e-16 | 73.6 |
| Msa0099730 | AT2G25780.1 | 35.537 | 121 | 70 | 4 | 99 | 217 | 39 | 153 | 2.68e-13 | 65.9 |
| Msa0099730 | AT1G79770.1 | 70.000 | 40 | 12 | 0 | 96 | 135 | 52 | 91 | 4.09e-13 | 65.5 |
| Msa0099730 | AT5G25840.1 | 36.923 | 130 | 62 | 6 | 96 | 215 | 43 | 162 | 1.36e-12 | 64.3 |
Find 55 sgRNAs with CRISPR-Local
Find 205 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCTTGAATTTGAAGTATT+TGG | 0.147763 | 1_3:-5939342 | None:intergenic |
| TCTGAACTGCTGGCGAAATT+TGG | 0.269881 | 1_3:-5940525 | None:intergenic |
| TATCGTGGCTGCGTGCGTAT+AGG | 0.361251 | 1_3:+5939171 | None:intergenic |
| CCGCAAAATGCAGCTGTTGC+GGG | 0.402544 | 1_3:+5940342 | Msa0099730:CDS |
| CATCCATCGTAGAGCCAATT+CGG | 0.405221 | 1_3:+5939280 | Msa0099730:CDS |
| ATCGTTCGTTCTTCTCCCAC+TGG | 0.415717 | 1_3:-5939366 | None:intergenic |
| ATGACATTACAGAGCCGAAT+TGG | 0.419760 | 1_3:-5939294 | None:intergenic |
| TATTGCAAGGCAAGCATTGT+TGG | 0.430244 | 1_3:+5940761 | Msa0099730:three_prime_UTR |
| CTTCCCGGACTTCAATCACT+TGG | 0.435213 | 1_3:+5940937 | Msa0099730:three_prime_UTR |
| CACGCAGAATGTTCCTTACT+CGG | 0.438740 | 1_3:-5940632 | None:intergenic |
| TTAGGACTTTGGATTCTCCT+AGG | 0.457929 | 1_3:+5940603 | Msa0099730:CDS |
| TCCTAGGAGCAAGCCGAGTA+AGG | 0.469773 | 1_3:+5940619 | Msa0099730:CDS |
| GGGAGAGATTCGGTGGAAGA+TGG | 0.469879 | 1_3:+5940405 | Msa0099730:CDS |
| GAATCAAAGAAGTGTGCATA+TGG | 0.471049 | 1_3:+5940268 | Msa0099730:CDS |
| GTATGTGTCTCTGTCGTCCT+TGG | 0.478341 | 1_3:-5940707 | None:intergenic |
| CAGCCAAGTGATTGAAGTCC+GGG | 0.480270 | 1_3:-5940940 | None:intergenic |
| ACCGCAAAATGCAGCTGTTG+CGG | 0.482069 | 1_3:+5940341 | Msa0099730:CDS |
| ATTAAGAATGAAGTGAACAT+TGG | 0.485034 | 1_3:+5940736 | Msa0099730:exon |
| TTCAAATTCAAGAGATCCAG+TGG | 0.485756 | 1_3:+5939350 | Msa0099730:CDS |
| CTGAGGCAGTGAAGGAAGAA+AGG | 0.486207 | 1_3:+5940444 | Msa0099730:CDS |
| GCAGCCAAGTGATTGAAGTC+CGG | 0.492400 | 1_3:-5940941 | None:intergenic |
| GTGATTGAATGGATGATGGT+TGG | 0.501259 | 1_3:+5940902 | Msa0099730:three_prime_UTR |
| CATTCTGCGTGCAGACCTCT+TGG | 0.504691 | 1_3:+5940644 | Msa0099730:CDS |
| AAGCAGAAGATCTGAACTGC+TGG | 0.512505 | 1_3:-5940535 | None:intergenic |
| GAAGGAAGAAAGGGCGAGGT+CGG | 0.514158 | 1_3:+5940454 | Msa0099730:CDS |
| ATGCAGCTGTTGCGGGTTGG+TGG | 0.517846 | 1_3:+5940349 | Msa0099730:CDS |
| AGAAGCTGAAGCGACAGAGA+TGG | 0.523368 | 1_3:+5940307 | Msa0099730:CDS |
| TCCTTACTCGGCTTGCTCCT+AGG | 0.526193 | 1_3:-5940620 | None:intergenic |
| TGTGTCTCTGTCGTCCTTGG+CGG | 0.528871 | 1_3:-5940704 | None:intergenic |
| GCGCGCGTGAGGGAGAGATT+CGG | 0.542153 | 1_3:+5940395 | Msa0099730:CDS |
| ACGCGTACATTGCGCGCGTG+AGG | 0.548939 | 1_3:+5940384 | Msa0099730:CDS |
| GTGAACATTGGATTATTGCA+AGG | 0.550018 | 1_3:+5940748 | Msa0099730:three_prime_UTR |
| GTGGCTGCGTGCGTATAGGT+TGG | 0.551144 | 1_3:+5939175 | None:intergenic |
| GTTAGTGATTGAATGGATGA+TGG | 0.552901 | 1_3:+5940898 | Msa0099730:three_prime_UTR |
| ATTGTTGGTTGGTGGTGTCA+AGG | 0.555820 | 1_3:+5940776 | Msa0099730:three_prime_UTR |
| AGGCAAGCATTGTTGGTTGG+TGG | 0.556701 | 1_3:+5940768 | Msa0099730:three_prime_UTR |
| CGCGTACATTGCGCGCGTGA+GGG | 0.561079 | 1_3:+5940385 | Msa0099730:CDS |
| TCATAGTTGCTTCTCAACAA+TGG | 0.575206 | 1_3:+5940673 | Msa0099730:CDS |
| TGCTAGTAATCAAAATGAGA+TGG | 0.577238 | 1_3:-5940963 | None:intergenic |
| GCAAGGCAAGCATTGTTGGT+TGG | 0.588889 | 1_3:+5940765 | Msa0099730:three_prime_UTR |
| TGAGGCAGTGAAGGAAGAAA+GGG | 0.590842 | 1_3:+5940445 | Msa0099730:CDS |
| CAGTGAAGGAAGAAAGGGCG+AGG | 0.593016 | 1_3:+5940450 | Msa0099730:CDS |
| TTTATGTGCTGAGGCAGTGA+AGG | 0.603888 | 1_3:+5940436 | Msa0099730:CDS |
| CGCGTGAGGGAGAGATTCGG+TGG | 0.607365 | 1_3:+5940398 | Msa0099730:CDS |
| GAGCCGAATTGGCTCTACGA+TGG | 0.623242 | 1_3:-5939283 | None:intergenic |
| AGAACGAACGATAATACATA+CGG | 0.628567 | 1_3:+5939377 | Msa0099730:CDS |
| AAAATGCAGCTGTTGCGGGT+TGG | 0.633011 | 1_3:+5940346 | Msa0099730:CDS |
| CAATGGAAACAACTCCGCCA+AGG | 0.641855 | 1_3:+5940690 | Msa0099730:CDS |
| TTCGGTGGAAGATGGATATG+CGG | 0.649354 | 1_3:+5940413 | Msa0099730:CDS |
| CAAGTGATTGAAGTCCGGGA+AGG | 0.660042 | 1_3:-5940936 | None:intergenic |
| CAACTATGAGATCTACCAAG+AGG | 0.689504 | 1_3:-5940659 | None:intergenic |
| CAATTGATGAAGCTTTAATG+CGG | 0.691551 | 1_3:+5940498 | Msa0099730:CDS |
| GATGATGAATGCGAAAACAG+AGG | 0.697194 | 1_3:-5939222 | None:intergenic |
| TCAAATTCAAGAGATCCAGT+GGG | 0.708820 | 1_3:+5939351 | Msa0099730:CDS |
| GATATGCGGTTTATGTGCTG+AGG | 0.715926 | 1_3:+5940427 | Msa0099730:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAGAAGAAAAAAAAAAAT+AGG | + | chr1_3:5939756-5939775 | Msa0099730:intron | 10.0% |
| !!! | TTTTTTATTATAATTAGAGA+CGG | + | chr1_3:5939833-5939852 | Msa0099730:intron | 10.0% |
| !!! | ATTGAATTTTAGTTTTTATA+TGG | + | chr1_3:5940986-5941005 | Msa0099730:three_prime_UTR | 10.0% |
| !! | ATAAGAAGAAAAAAAAAAAT+AGG | + | chr1_3:5939756-5939775 | Msa0099730:intron | 10.0% |
| !!! | TTTTTTATTATAATTAGAGA+CGG | + | chr1_3:5939833-5939852 | Msa0099730:intron | 10.0% |
| !!! | ATTGAATTTTAGTTTTTATA+TGG | + | chr1_3:5940986-5941005 | Msa0099730:three_prime_UTR | 10.0% |
| !! | AGAAGTAAAGTATATTATAT+TGG | - | chr1_3:5939411-5939430 | None:intergenic | 15.0% |
| !!! | TAGATTAAATTAATTTTGCA+AGG | - | chr1_3:5939450-5939469 | None:intergenic | 15.0% |
| !! | GAAAAAAAAAAATAGGTATT+TGG | + | chr1_3:5939763-5939782 | Msa0099730:intron | 15.0% |
| !!! | TTGTGTTTTTTTATAAATGT+CGG | + | chr1_3:5940212-5940231 | Msa0099730:intron | 15.0% |
| !!! | ATGATTTATGTTTTGTTTTT+TGG | + | chr1_3:5940874-5940893 | Msa0099730:three_prime_UTR | 15.0% |
| !!! | AATTTTAGTTTTTATATGGT+TGG | + | chr1_3:5940990-5941009 | Msa0099730:three_prime_UTR | 15.0% |
| !! | AGAAGTAAAGTATATTATAT+TGG | - | chr1_3:5939411-5939430 | None:intergenic | 15.0% |
| !!! | TAGATTAAATTAATTTTGCA+AGG | - | chr1_3:5939450-5939469 | None:intergenic | 15.0% |
| !! | GAAAAAAAAAAATAGGTATT+TGG | + | chr1_3:5939763-5939782 | Msa0099730:intron | 15.0% |
| !!! | TTGTGTTTTTTTATAAATGT+CGG | + | chr1_3:5940212-5940231 | Msa0099730:intron | 15.0% |
| !!! | ATGATTTATGTTTTGTTTTT+TGG | + | chr1_3:5940874-5940893 | Msa0099730:three_prime_UTR | 15.0% |
| !!! | TTTGCTTTACTTTTACTTTT+TGG | + | chr1_3:5939316-5939335 | Msa0099730:CDS | 20.0% |
| !!! | TTTTTTTCTTCTTATAACCA+GGG | - | chr1_3:5939751-5939770 | None:intergenic | 20.0% |
| !!! | TTTTTTTTCTTCTTATAACC+AGG | - | chr1_3:5939752-5939771 | None:intergenic | 20.0% |
| !! | AAATAATGACACAATATCAA+TGG | - | chr1_3:5940116-5940135 | None:intergenic | 20.0% |
| !! | AGAAAAAACCTCTAATAATA+GGG | - | chr1_3:5940155-5940174 | None:intergenic | 20.0% |
| !!! | TTGTTATGTTTTGAAGATTA+TGG | + | chr1_3:5940851-5940870 | Msa0099730:three_prime_UTR | 20.0% |
| !!! | TTTGCTTTACTTTTACTTTT+TGG | + | chr1_3:5939316-5939335 | Msa0099730:CDS | 20.0% |
| !!! | TTTTTTTCTTCTTATAACCA+GGG | - | chr1_3:5939751-5939770 | None:intergenic | 20.0% |
| !!! | TTTTTTTTCTTCTTATAACC+AGG | - | chr1_3:5939752-5939771 | None:intergenic | 20.0% |
| !! | AAATAATGACACAATATCAA+TGG | - | chr1_3:5940116-5940135 | None:intergenic | 20.0% |
| !! | AGAAAAAACCTCTAATAATA+GGG | - | chr1_3:5940155-5940174 | None:intergenic | 20.0% |
| !!! | TTGTTATGTTTTGAAGATTA+TGG | + | chr1_3:5940851-5940870 | Msa0099730:three_prime_UTR | 20.0% |
| !! | TCTCTTGAATTTGAAGTATT+TGG | - | chr1_3:5939345-5939364 | None:intergenic | 25.0% |
| !!! | AGCTTTGAACAAAATCAATA+CGG | - | chr1_3:5939516-5939535 | None:intergenic | 25.0% |
| ! | TTATGAATTCAGCAAAATCA+TGG | - | chr1_3:5939574-5939593 | None:intergenic | 25.0% |
| !! | TAGGTATTTGGTCTAAAATT+TGG | + | chr1_3:5939775-5939794 | Msa0099730:intron | 25.0% |
| ! | TTTATTATAATTAGAGACGG+AGG | + | chr1_3:5939836-5939855 | Msa0099730:intron | 25.0% |
| !!! | TATATGGTTCTAAATTGTCA+TGG | + | chr1_3:5939865-5939884 | Msa0099730:intron | 25.0% |
| ! | TCTAATAATAGGGCAATTAT+AGG | - | chr1_3:5940145-5940164 | None:intergenic | 25.0% |
| ! | TATAATTGCCCTATTATTAG+AGG | + | chr1_3:5940144-5940163 | Msa0099730:intron | 25.0% |
| ! | GAGAAAAAACCTCTAATAAT+AGG | - | chr1_3:5940156-5940175 | None:intergenic | 25.0% |
| ! | ATTAAGAATGAAGTGAACAT+TGG | + | chr1_3:5940736-5940755 | Msa0099730:exon | 25.0% |
| !!! | CTTGTTTATGTTTTTAGTCT+TGG | + | chr1_3:5940828-5940847 | Msa0099730:three_prime_UTR | 25.0% |
| !! | TCTCTTGAATTTGAAGTATT+TGG | - | chr1_3:5939345-5939364 | None:intergenic | 25.0% |
| !!! | AGCTTTGAACAAAATCAATA+CGG | - | chr1_3:5939516-5939535 | None:intergenic | 25.0% |
| ! | TTATGAATTCAGCAAAATCA+TGG | - | chr1_3:5939574-5939593 | None:intergenic | 25.0% |
| !! | TAGGTATTTGGTCTAAAATT+TGG | + | chr1_3:5939775-5939794 | Msa0099730:intron | 25.0% |
| ! | TTTATTATAATTAGAGACGG+AGG | + | chr1_3:5939836-5939855 | Msa0099730:intron | 25.0% |
| !!! | TATATGGTTCTAAATTGTCA+TGG | + | chr1_3:5939865-5939884 | Msa0099730:intron | 25.0% |
| ! | TCTAATAATAGGGCAATTAT+AGG | - | chr1_3:5940145-5940164 | None:intergenic | 25.0% |
| ! | TATAATTGCCCTATTATTAG+AGG | + | chr1_3:5940144-5940163 | Msa0099730:intron | 25.0% |
| ! | GAGAAAAAACCTCTAATAAT+AGG | - | chr1_3:5940156-5940175 | None:intergenic | 25.0% |
| ! | ATTAAGAATGAAGTGAACAT+TGG | + | chr1_3:5940736-5940755 | Msa0099730:exon | 25.0% |
| !!! | CTTGTTTATGTTTTTAGTCT+TGG | + | chr1_3:5940828-5940847 | Msa0099730:three_prime_UTR | 25.0% |
| !!! | GCTTTACTTTTACTTTTTGG+CGG | + | chr1_3:5939319-5939338 | Msa0099730:CDS | 30.0% |
| AGAACGAACGATAATACATA+CGG | + | chr1_3:5939377-5939396 | Msa0099730:CDS | 30.0% | |
| !!! | TTTTGTTTTTGCAACCTCAT+CGG | - | chr1_3:5939909-5939928 | None:intergenic | 30.0% |
| TTCAAAATAATTTGATGCCG+TGG | + | chr1_3:5940008-5940027 | Msa0099730:intron | 30.0% | |
| TTGTTTGTGCTTAAATTCAG+AGG | + | chr1_3:5940246-5940265 | Msa0099730:intron | 30.0% | |
| ! | CAATTGATGAAGCTTTAATG+CGG | + | chr1_3:5940498-5940517 | Msa0099730:CDS | 30.0% |
| ! | CTGTGAAACAGATTCTTTTT+AGG | + | chr1_3:5940585-5940604 | Msa0099730:CDS | 30.0% |
| !!! | ACAGATTCTTTTTAGGACTT+TGG | + | chr1_3:5940592-5940611 | Msa0099730:CDS | 30.0% |
| TGCTAGTAATCAAAATGAGA+TGG | - | chr1_3:5940966-5940985 | None:intergenic | 30.0% | |
| !!! | GCTTTACTTTTACTTTTTGG+CGG | + | chr1_3:5939319-5939338 | Msa0099730:CDS | 30.0% |
| AGAACGAACGATAATACATA+CGG | + | chr1_3:5939377-5939396 | Msa0099730:CDS | 30.0% | |
| !!! | TTTTGTTTTTGCAACCTCAT+CGG | - | chr1_3:5939909-5939928 | None:intergenic | 30.0% |
| TTCAAAATAATTTGATGCCG+TGG | + | chr1_3:5940008-5940027 | Msa0099730:intron | 30.0% | |
| TTGTTTGTGCTTAAATTCAG+AGG | + | chr1_3:5940246-5940265 | Msa0099730:intron | 30.0% | |
| ! | CAATTGATGAAGCTTTAATG+CGG | + | chr1_3:5940498-5940517 | Msa0099730:CDS | 30.0% |
| ! | CTGTGAAACAGATTCTTTTT+AGG | + | chr1_3:5940585-5940604 | Msa0099730:CDS | 30.0% |
| !!! | ACAGATTCTTTTTAGGACTT+TGG | + | chr1_3:5940592-5940611 | Msa0099730:CDS | 30.0% |
| TGCTAGTAATCAAAATGAGA+TGG | - | chr1_3:5940966-5940985 | None:intergenic | 30.0% | |
| TTCAAATTCAAGAGATCCAG+TGG | + | chr1_3:5939350-5939369 | Msa0099730:CDS | 35.0% | |
| TCAAATTCAAGAGATCCAGT+GGG | + | chr1_3:5939351-5939370 | Msa0099730:CDS | 35.0% | |
| ! | TTTTGTTCAAAGCTGCCTTT+TGG | + | chr1_3:5939522-5939541 | Msa0099730:intron | 35.0% |
| TTTCTTCTTATAACCAGGGA+CGG | - | chr1_3:5939747-5939766 | None:intergenic | 35.0% | |
| ACAACATCAATCATGCATCA+AGG | - | chr1_3:5940181-5940200 | None:intergenic | 35.0% | |
| ! | GAATCAAAGAAGTGTGCATA+TGG | + | chr1_3:5940268-5940287 | Msa0099730:CDS | 35.0% |
| TCATAGTTGCTTCTCAACAA+TGG | + | chr1_3:5940673-5940692 | Msa0099730:CDS | 35.0% | |
| GTGAACATTGGATTATTGCA+AGG | + | chr1_3:5940748-5940767 | Msa0099730:three_prime_UTR | 35.0% | |
| ! | TTTTGGCGTTAGTGATTGAA+TGG | + | chr1_3:5940891-5940910 | Msa0099730:three_prime_UTR | 35.0% |
| GTTAGTGATTGAATGGATGA+TGG | + | chr1_3:5940898-5940917 | Msa0099730:three_prime_UTR | 35.0% | |
| TTCAAATTCAAGAGATCCAG+TGG | + | chr1_3:5939350-5939369 | Msa0099730:CDS | 35.0% | |
| TCAAATTCAAGAGATCCAGT+GGG | + | chr1_3:5939351-5939370 | Msa0099730:CDS | 35.0% | |
| ! | TTTTGTTCAAAGCTGCCTTT+TGG | + | chr1_3:5939522-5939541 | Msa0099730:intron | 35.0% |
| TTTCTTCTTATAACCAGGGA+CGG | - | chr1_3:5939747-5939766 | None:intergenic | 35.0% | |
| ACAACATCAATCATGCATCA+AGG | - | chr1_3:5940181-5940200 | None:intergenic | 35.0% | |
| ! | GAATCAAAGAAGTGTGCATA+TGG | + | chr1_3:5940268-5940287 | Msa0099730:CDS | 35.0% |
| TCATAGTTGCTTCTCAACAA+TGG | + | chr1_3:5940673-5940692 | Msa0099730:CDS | 35.0% | |
| GTGAACATTGGATTATTGCA+AGG | + | chr1_3:5940748-5940767 | Msa0099730:three_prime_UTR | 35.0% | |
| ! | TTTTGGCGTTAGTGATTGAA+TGG | + | chr1_3:5940891-5940910 | Msa0099730:three_prime_UTR | 35.0% |
| GTTAGTGATTGAATGGATGA+TGG | + | chr1_3:5940898-5940917 | Msa0099730:three_prime_UTR | 35.0% | |
| GATGATGAATGCGAAAACAG+AGG | - | chr1_3:5939225-5939244 | None:intergenic | 40.0% | |
| ATGACATTACAGAGCCGAAT+TGG | - | chr1_3:5939297-5939316 | None:intergenic | 40.0% | |
| AAATAATTTGATGCCGTGGC+AGG | + | chr1_3:5940012-5940031 | Msa0099730:intron | 40.0% | |
| AATAATTTGATGCCGTGGCA+GGG | + | chr1_3:5940013-5940032 | Msa0099730:intron | 40.0% | |
| TTAGGACTTTGGATTCTCCT+AGG | + | chr1_3:5940603-5940622 | Msa0099730:CDS | 40.0% | |
| CAACTATGAGATCTACCAAG+AGG | - | chr1_3:5940662-5940681 | None:intergenic | 40.0% | |
| ! | TATTGCAAGGCAAGCATTGT+TGG | + | chr1_3:5940761-5940780 | Msa0099730:three_prime_UTR | 40.0% |
| ! | GTGATTGAATGGATGATGGT+TGG | + | chr1_3:5940902-5940921 | Msa0099730:three_prime_UTR | 40.0% |
| ! | TGGAGAAAAGTTTTCCTTCC+CGG | + | chr1_3:5940922-5940941 | Msa0099730:three_prime_UTR | 40.0% |
| GATGATGAATGCGAAAACAG+AGG | - | chr1_3:5939225-5939244 | None:intergenic | 40.0% | |
| ATGACATTACAGAGCCGAAT+TGG | - | chr1_3:5939297-5939316 | None:intergenic | 40.0% | |
| AAATAATTTGATGCCGTGGC+AGG | + | chr1_3:5940012-5940031 | Msa0099730:intron | 40.0% | |
| AATAATTTGATGCCGTGGCA+GGG | + | chr1_3:5940013-5940032 | Msa0099730:intron | 40.0% | |
| TTAGGACTTTGGATTCTCCT+AGG | + | chr1_3:5940603-5940622 | Msa0099730:CDS | 40.0% | |
| CAACTATGAGATCTACCAAG+AGG | - | chr1_3:5940662-5940681 | None:intergenic | 40.0% | |
| ! | TATTGCAAGGCAAGCATTGT+TGG | + | chr1_3:5940761-5940780 | Msa0099730:three_prime_UTR | 40.0% |
| ! | GTGATTGAATGGATGATGGT+TGG | + | chr1_3:5940902-5940921 | Msa0099730:three_prime_UTR | 40.0% |
| ! | TGGAGAAAAGTTTTCCTTCC+CGG | + | chr1_3:5940922-5940941 | Msa0099730:three_prime_UTR | 40.0% |
| CATCCATCGTAGAGCCAATT+CGG | + | chr1_3:5939280-5939299 | Msa0099730:CDS | 45.0% | |
| ! | TTTTACCGCGAAGCTCCAAA+AGG | - | chr1_3:5939540-5939559 | None:intergenic | 45.0% |
| GGACGGAGAGAGTAATAATG+TGG | - | chr1_3:5939730-5939749 | None:intergenic | 45.0% | |
| ATTATTACTCTCTCCGTCCC+TGG | + | chr1_3:5939731-5939750 | Msa0099730:intron | 45.0% | |
| GAGACGGAGGAGTAGTTATA+TGG | + | chr1_3:5939849-5939868 | Msa0099730:intron | 45.0% | |
| AACTACAGCTGTTTGCATCG+TGG | + | chr1_3:5939929-5939948 | Msa0099730:intron | 45.0% | |
| TTGCATCGTGGTTGGAATTG+TGG | + | chr1_3:5939941-5939960 | Msa0099730:intron | 45.0% | |
| TGGTTGGAATTGTGGTTGCA+GGG | + | chr1_3:5939949-5939968 | Msa0099730:intron | 45.0% | |
| TCACTTTATAAGCCCTGCCA+CGG | - | chr1_3:5940028-5940047 | None:intergenic | 45.0% | |
| TTCGGTGGAAGATGGATATG+CGG | + | chr1_3:5940413-5940432 | Msa0099730:CDS | 45.0% | |
| GATATGCGGTTTATGTGCTG+AGG | + | chr1_3:5940427-5940446 | Msa0099730:CDS | 45.0% | |
| TTTATGTGCTGAGGCAGTGA+AGG | + | chr1_3:5940436-5940455 | Msa0099730:CDS | 45.0% | |
| TGAGGCAGTGAAGGAAGAAA+GGG | + | chr1_3:5940445-5940464 | Msa0099730:CDS | 45.0% | |
| TCTGAACTGCTGGCGAAATT+TGG | - | chr1_3:5940528-5940547 | None:intergenic | 45.0% | |
| AAGCAGAAGATCTGAACTGC+TGG | - | chr1_3:5940538-5940557 | None:intergenic | 45.0% | |
| CACGCAGAATGTTCCTTACT+CGG | - | chr1_3:5940635-5940654 | None:intergenic | 45.0% | |
| !! | ATTGTTGGTTGGTGGTGTCA+AGG | + | chr1_3:5940776-5940795 | Msa0099730:three_prime_UTR | 45.0% |
| CATCCATCGTAGAGCCAATT+CGG | + | chr1_3:5939280-5939299 | Msa0099730:CDS | 45.0% | |
| ! | TTTTACCGCGAAGCTCCAAA+AGG | - | chr1_3:5939540-5939559 | None:intergenic | 45.0% |
| GGACGGAGAGAGTAATAATG+TGG | - | chr1_3:5939730-5939749 | None:intergenic | 45.0% | |
| ATTATTACTCTCTCCGTCCC+TGG | + | chr1_3:5939731-5939750 | Msa0099730:intron | 45.0% | |
| GAGACGGAGGAGTAGTTATA+TGG | + | chr1_3:5939849-5939868 | Msa0099730:intron | 45.0% | |
| AACTACAGCTGTTTGCATCG+TGG | + | chr1_3:5939929-5939948 | Msa0099730:intron | 45.0% | |
| TTGCATCGTGGTTGGAATTG+TGG | + | chr1_3:5939941-5939960 | Msa0099730:intron | 45.0% | |
| TGGTTGGAATTGTGGTTGCA+GGG | + | chr1_3:5939949-5939968 | Msa0099730:intron | 45.0% | |
| TCACTTTATAAGCCCTGCCA+CGG | - | chr1_3:5940028-5940047 | None:intergenic | 45.0% | |
| TTCGGTGGAAGATGGATATG+CGG | + | chr1_3:5940413-5940432 | Msa0099730:CDS | 45.0% | |
| GATATGCGGTTTATGTGCTG+AGG | + | chr1_3:5940427-5940446 | Msa0099730:CDS | 45.0% | |
| TTTATGTGCTGAGGCAGTGA+AGG | + | chr1_3:5940436-5940455 | Msa0099730:CDS | 45.0% | |
| TGAGGCAGTGAAGGAAGAAA+GGG | + | chr1_3:5940445-5940464 | Msa0099730:CDS | 45.0% | |
| TCTGAACTGCTGGCGAAATT+TGG | - | chr1_3:5940528-5940547 | None:intergenic | 45.0% | |
| AAGCAGAAGATCTGAACTGC+TGG | - | chr1_3:5940538-5940557 | None:intergenic | 45.0% | |
| CACGCAGAATGTTCCTTACT+CGG | - | chr1_3:5940635-5940654 | None:intergenic | 45.0% | |
| !! | ATTGTTGGTTGGTGGTGTCA+AGG | + | chr1_3:5940776-5940795 | Msa0099730:three_prime_UTR | 45.0% |
| ATCGTTCGTTCTTCTCCCAC+TGG | - | chr1_3:5939369-5939388 | None:intergenic | 50.0% | |
| GTTGATGCATGCATCCGATG+AGG | + | chr1_3:5939892-5939911 | Msa0099730:intron | 50.0% | |
| ACAGCTGTTTGCATCGTGGT+TGG | + | chr1_3:5939933-5939952 | Msa0099730:intron | 50.0% | |
| GTGGTTGGAATTGTGGTTGC+AGG | + | chr1_3:5939948-5939967 | Msa0099730:intron | 50.0% | |
| AGAAGCTGAAGCGACAGAGA+TGG | + | chr1_3:5940307-5940326 | Msa0099730:CDS | 50.0% | |
| ACCGCAAAATGCAGCTGTTG+CGG | + | chr1_3:5940341-5940360 | Msa0099730:CDS | 50.0% | |
| AAAATGCAGCTGTTGCGGGT+TGG | + | chr1_3:5940346-5940365 | Msa0099730:CDS | 50.0% | |
| CTGAGGCAGTGAAGGAAGAA+AGG | + | chr1_3:5940444-5940463 | Msa0099730:CDS | 50.0% | |
| CAATGGAAACAACTCCGCCA+AGG | + | chr1_3:5940690-5940709 | Msa0099730:CDS | 50.0% | |
| GTATGTGTCTCTGTCGTCCT+TGG | - | chr1_3:5940710-5940729 | None:intergenic | 50.0% | |
| ! | GCAAGGCAAGCATTGTTGGT+TGG | + | chr1_3:5940765-5940784 | Msa0099730:three_prime_UTR | 50.0% |
| ! | AGGCAAGCATTGTTGGTTGG+TGG | + | chr1_3:5940768-5940787 | Msa0099730:three_prime_UTR | 50.0% |
| CAAGTGATTGAAGTCCGGGA+AGG | - | chr1_3:5940939-5940958 | None:intergenic | 50.0% | |
| CTTCCCGGACTTCAATCACT+TGG | + | chr1_3:5940937-5940956 | Msa0099730:three_prime_UTR | 50.0% | |
| CAGCCAAGTGATTGAAGTCC+GGG | - | chr1_3:5940943-5940962 | None:intergenic | 50.0% | |
| GCAGCCAAGTGATTGAAGTC+CGG | - | chr1_3:5940944-5940963 | None:intergenic | 50.0% | |
| ATCGTTCGTTCTTCTCCCAC+TGG | - | chr1_3:5939369-5939388 | None:intergenic | 50.0% | |
| GTTGATGCATGCATCCGATG+AGG | + | chr1_3:5939892-5939911 | Msa0099730:intron | 50.0% | |
| ACAGCTGTTTGCATCGTGGT+TGG | + | chr1_3:5939933-5939952 | Msa0099730:intron | 50.0% | |
| GTGGTTGGAATTGTGGTTGC+AGG | + | chr1_3:5939948-5939967 | Msa0099730:intron | 50.0% | |
| AGAAGCTGAAGCGACAGAGA+TGG | + | chr1_3:5940307-5940326 | Msa0099730:CDS | 50.0% | |
| ACCGCAAAATGCAGCTGTTG+CGG | + | chr1_3:5940341-5940360 | Msa0099730:CDS | 50.0% | |
| AAAATGCAGCTGTTGCGGGT+TGG | + | chr1_3:5940346-5940365 | Msa0099730:CDS | 50.0% | |
| CTGAGGCAGTGAAGGAAGAA+AGG | + | chr1_3:5940444-5940463 | Msa0099730:CDS | 50.0% | |
| CAATGGAAACAACTCCGCCA+AGG | + | chr1_3:5940690-5940709 | Msa0099730:CDS | 50.0% | |
| GTATGTGTCTCTGTCGTCCT+TGG | - | chr1_3:5940710-5940729 | None:intergenic | 50.0% | |
| ! | GCAAGGCAAGCATTGTTGGT+TGG | + | chr1_3:5940765-5940784 | Msa0099730:three_prime_UTR | 50.0% |
| ! | AGGCAAGCATTGTTGGTTGG+TGG | + | chr1_3:5940768-5940787 | Msa0099730:three_prime_UTR | 50.0% |
| CAAGTGATTGAAGTCCGGGA+AGG | - | chr1_3:5940939-5940958 | None:intergenic | 50.0% | |
| CTTCCCGGACTTCAATCACT+TGG | + | chr1_3:5940937-5940956 | Msa0099730:three_prime_UTR | 50.0% | |
| CAGCCAAGTGATTGAAGTCC+GGG | - | chr1_3:5940943-5940962 | None:intergenic | 50.0% | |
| GCAGCCAAGTGATTGAAGTC+CGG | - | chr1_3:5940944-5940963 | None:intergenic | 50.0% | |
| !! | GAGCCGAATTGGCTCTACGA+TGG | - | chr1_3:5939286-5939305 | None:intergenic | 55.0% |
| !!! | AGCTGCCTTTTGGAGCTTCG+CGG | + | chr1_3:5939532-5939551 | Msa0099730:intron | 55.0% |
| ! | CCCGCAACAGCTGCATTTTG+CGG | - | chr1_3:5940345-5940364 | None:intergenic | 55.0% |
| CCGCAAAATGCAGCTGTTGC+GGG | + | chr1_3:5940342-5940361 | Msa0099730:CDS | 55.0% | |
| !! | GGGAGAGATTCGGTGGAAGA+TGG | + | chr1_3:5940405-5940424 | Msa0099730:CDS | 55.0% |
| CAGTGAAGGAAGAAAGGGCG+AGG | + | chr1_3:5940450-5940469 | Msa0099730:CDS | 55.0% | |
| GAAGGAAGAAAGGGCGAGGT+CGG | + | chr1_3:5940454-5940473 | Msa0099730:CDS | 55.0% | |
| TCCTAGGAGCAAGCCGAGTA+AGG | + | chr1_3:5940619-5940638 | Msa0099730:CDS | 55.0% | |
| ! | TCCTTACTCGGCTTGCTCCT+AGG | - | chr1_3:5940623-5940642 | None:intergenic | 55.0% |
| CATTCTGCGTGCAGACCTCT+TGG | + | chr1_3:5940644-5940663 | Msa0099730:CDS | 55.0% | |
| TGTGTCTCTGTCGTCCTTGG+CGG | - | chr1_3:5940707-5940726 | None:intergenic | 55.0% | |
| !! | GAGCCGAATTGGCTCTACGA+TGG | - | chr1_3:5939286-5939305 | None:intergenic | 55.0% |
| !!! | AGCTGCCTTTTGGAGCTTCG+CGG | + | chr1_3:5939532-5939551 | Msa0099730:intron | 55.0% |
| ! | CCCGCAACAGCTGCATTTTG+CGG | - | chr1_3:5940345-5940364 | None:intergenic | 55.0% |
| CCGCAAAATGCAGCTGTTGC+GGG | + | chr1_3:5940342-5940361 | Msa0099730:CDS | 55.0% | |
| !! | GGGAGAGATTCGGTGGAAGA+TGG | + | chr1_3:5940405-5940424 | Msa0099730:CDS | 55.0% |
| CAGTGAAGGAAGAAAGGGCG+AGG | + | chr1_3:5940450-5940469 | Msa0099730:CDS | 55.0% | |
| GAAGGAAGAAAGGGCGAGGT+CGG | + | chr1_3:5940454-5940473 | Msa0099730:CDS | 55.0% | |
| TCCTAGGAGCAAGCCGAGTA+AGG | + | chr1_3:5940619-5940638 | Msa0099730:CDS | 55.0% | |
| ! | TCCTTACTCGGCTTGCTCCT+AGG | - | chr1_3:5940623-5940642 | None:intergenic | 55.0% |
| CATTCTGCGTGCAGACCTCT+TGG | + | chr1_3:5940644-5940663 | Msa0099730:CDS | 55.0% | |
| TGTGTCTCTGTCGTCCTTGG+CGG | - | chr1_3:5940707-5940726 | None:intergenic | 55.0% | |
| !! | ATGCAGCTGTTGCGGGTTGG+TGG | + | chr1_3:5940349-5940368 | Msa0099730:CDS | 60.0% |
| !! | ATGCAGCTGTTGCGGGTTGG+TGG | + | chr1_3:5940349-5940368 | Msa0099730:CDS | 60.0% |
| ACGCGTACATTGCGCGCGTG+AGG | + | chr1_3:5940384-5940403 | Msa0099730:CDS | 65.0% | |
| CGCGTACATTGCGCGCGTGA+GGG | + | chr1_3:5940385-5940404 | Msa0099730:CDS | 65.0% | |
| GCGCGCGTGAGGGAGAGATT+CGG | + | chr1_3:5940395-5940414 | Msa0099730:CDS | 65.0% | |
| CGCGTGAGGGAGAGATTCGG+TGG | + | chr1_3:5940398-5940417 | Msa0099730:CDS | 65.0% | |
| ACGCGTACATTGCGCGCGTG+AGG | + | chr1_3:5940384-5940403 | Msa0099730:CDS | 65.0% | |
| CGCGTACATTGCGCGCGTGA+GGG | + | chr1_3:5940385-5940404 | Msa0099730:CDS | 65.0% | |
| GCGCGCGTGAGGGAGAGATT+CGG | + | chr1_3:5940395-5940414 | Msa0099730:CDS | 65.0% | |
| CGCGTGAGGGAGAGATTCGG+TGG | + | chr1_3:5940398-5940417 | Msa0099730:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 5939183 | 5941011 | 5939183 | ID=Msa0099730;Name=Msa0099730 |
| chr1_3 | mRNA | 5939183 | 5941011 | 5939183 | ID=Msa0099730-mRNA-1;Parent=Msa0099730;Name=Msa0099730-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|1|1|1|0|0.5|2|275|228 |
| chr1_3 | exon | 5939183 | 5939398 | 5939183 | ID=Msa0099730-mRNA-1:exon:2259;Parent=Msa0099730-mRNA-1 |
| chr1_3 | exon | 5940266 | 5941011 | 5940266 | ID=Msa0099730-mRNA-1:exon:2260;Parent=Msa0099730-mRNA-1 |
| chr1_3 | CDS | 5939183 | 5939398 | 5939183 | ID=Msa0099730-mRNA-1:cds;Parent=Msa0099730-mRNA-1 |
| chr1_3 | CDS | 5940266 | 5940736 | 5940266 | ID=Msa0099730-mRNA-1:cds;Parent=Msa0099730-mRNA-1 |
| chr1_3 | three_prime_UTR | 5940737 | 5941011 | 5940737 | ID=Msa0099730-mRNA-1:three_prime_utr;Parent=Msa0099730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
