Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0305580 | KEH39635.1 | 98.716 | 545 | 7 | 0 | 1 | 545 | 26 | 570 | 0.0 | 1095 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0305580 | sp|Q9S9N8|NRAM6_ARATH | 79.238 | 525 | 96 | 2 | 16 | 538 | 6 | 519 | 0.0 | 859 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006470 | Msa0305580 | 0.823177 | 1.593609e-53 | -8.615850e-47 |
| Msa0016440 | Msa0305580 | -0.809202 | 2.125693e-50 | -8.615850e-47 |
| Msa0017420 | Msa0305580 | 0.803175 | 3.951801e-49 | -8.615850e-47 |
| Msa0021980 | Msa0305580 | 0.813238 | 2.832541e-51 | -8.615850e-47 |
| Msa0025690 | Msa0305580 | 0.814171 | 1.764869e-51 | -8.615850e-47 |
| Msa0026120 | Msa0305580 | 0.811963 | 5.381092e-51 | -8.615850e-47 |
| Msa0030030 | Msa0305580 | 0.839072 | 1.972221e-57 | -8.615850e-47 |
| Msa0039200 | Msa0305580 | 0.833344 | 5.629682e-56 | -8.615850e-47 |
| Msa0040190 | Msa0305580 | 0.808278 | 3.350664e-50 | -8.615850e-47 |
| Msa0051100 | Msa0305580 | 0.808030 | 3.783151e-50 | -8.615850e-47 |
| Msa0053480 | Msa0305580 | 0.818517 | 1.880677e-52 | -8.615850e-47 |
| Msa0055650 | Msa0305580 | 0.842698 | 2.206464e-58 | -8.615850e-47 |
| Msa0070090 | Msa0305580 | 0.817106 | 3.916940e-52 | -8.615850e-47 |
| Msa0077330 | Msa0305580 | 0.843814 | 1.111297e-58 | -8.615850e-47 |
| Msa0083200 | Msa0305580 | 0.806953 | 6.403602e-50 | -8.615850e-47 |
| Msa0086820 | Msa0305580 | 0.838423 | 2.901535e-57 | -8.615850e-47 |
| Msa0087880 | Msa0305580 | 0.800873 | 1.175121e-48 | -8.615850e-47 |
| Msa0090350 | Msa0305580 | 0.809714 | 1.650979e-50 | -8.615850e-47 |
| Msa0093440 | Msa0305580 | 0.803762 | 2.985893e-49 | -8.615850e-47 |
| Msa0101650 | Msa0305580 | 0.817505 | 3.185407e-52 | -8.615850e-47 |
| Msa0121460 | Msa0305580 | 0.816821 | 4.538751e-52 | -8.615850e-47 |
| Msa0133670 | Msa0305580 | 0.830653 | 2.601687e-55 | -8.615850e-47 |
| Msa0133880 | Msa0305580 | 0.829255 | 5.703245e-55 | -8.615850e-47 |
| Msa0134550 | Msa0305580 | 0.805699 | 1.176732e-49 | -8.615850e-47 |
| Msa0143210 | Msa0305580 | 0.806370 | 8.499887e-50 | -8.615850e-47 |
| Msa0166580 | Msa0305580 | 0.812805 | 3.523703e-51 | -8.615850e-47 |
| Msa0169960 | Msa0305580 | 0.823966 | 1.041996e-53 | -8.615850e-47 |
| Msa0175480 | Msa0305580 | 0.821400 | 4.119510e-53 | -8.615850e-47 |
| Msa0181290 | Msa0305580 | 0.822604 | 2.167186e-53 | -8.615850e-47 |
| Msa0184030 | Msa0305580 | 0.819035 | 1.434730e-52 | -8.615850e-47 |
| Msa0184120 | Msa0305580 | 0.833002 | 6.848580e-56 | -8.615850e-47 |
| Msa0198220 | Msa0305580 | 0.800498 | 1.401033e-48 | -8.615850e-47 |
| Msa0207900 | Msa0305580 | 0.806269 | 8.928629e-50 | -8.615850e-47 |
| Msa0216550 | Msa0305580 | 0.812744 | 3.634412e-51 | -8.615850e-47 |
| Msa0218480 | Msa0305580 | 0.834011 | 3.835997e-56 | -8.615850e-47 |
| Msa0218590 | Msa0305580 | 0.834547 | 2.813881e-56 | -8.615850e-47 |
| Msa0222720 | Msa0305580 | 0.828119 | 1.073230e-54 | -8.615850e-47 |
| Msa0225370 | Msa0305580 | 0.849038 | 4.179605e-60 | -8.615850e-47 |
| Msa0226580 | Msa0305580 | 0.803249 | 3.815406e-49 | -8.615850e-47 |
| Msa0242700 | Msa0305580 | -0.806534 | 7.852617e-50 | -8.615850e-47 |
| Msa0256170 | Msa0305580 | 0.805919 | 1.057963e-49 | -8.615850e-47 |
| Msa0256410 | Msa0305580 | 0.821173 | 4.648307e-53 | -8.615850e-47 |
| Msa0259620 | Msa0305580 | 0.921880 | 2.026557e-88 | -8.615850e-47 |
| Msa0264020 | Msa0305580 | 0.827026 | 1.963503e-54 | -8.615850e-47 |
| Msa0264240 | Msa0305580 | 0.841323 | 5.095484e-58 | -8.615850e-47 |
| Msa0266380 | Msa0305580 | 0.847378 | 1.201402e-59 | -8.615850e-47 |
| Msa0295850 | Msa0305580 | 0.822226 | 2.652380e-53 | -8.615850e-47 |
| Msa0305580 | Msa0327150 | 0.832781 | 7.772693e-56 | -8.615850e-47 |
| Msa0305580 | Msa0334170 | 0.807788 | 4.258752e-50 | -8.615850e-47 |
| Msa0305580 | Msa0339560 | 0.850917 | 1.245144e-60 | -8.615850e-47 |
| Msa0305580 | Msa0341520 | 0.936499 | 1.573935e-97 | -8.615850e-47 |
| Msa0305580 | Msa0341860 | 0.836290 | 1.020329e-56 | -8.615850e-47 |
| Msa0305580 | Msa0378620 | 0.802482 | 5.494472e-49 | -8.615850e-47 |
| Msa0305580 | Msa0379500 | 0.825176 | 5.405679e-54 | -8.615850e-47 |
| Msa0305580 | Msa0379850 | 0.800735 | 1.253628e-48 | -8.615850e-47 |
| Msa0305580 | Msa0404180 | 0.821219 | 4.534952e-53 | -8.615850e-47 |
| Msa0305580 | Msa0404870 | 0.802369 | 5.795550e-49 | -8.615850e-47 |
| Msa0305580 | Msa0411000 | 0.800480 | 1.413303e-48 | -8.615850e-47 |
| Msa0305580 | Msa0421390 | 0.810395 | 1.177671e-50 | -8.615850e-47 |
| Msa0305580 | Msa0451370 | 0.808596 | 2.864984e-50 | -8.615850e-47 |
| Msa0305580 | Msa0475360 | 0.829284 | 5.609905e-55 | -8.615850e-47 |
| Msa0305580 | Msa0475830 | 0.815265 | 1.010130e-51 | -8.615850e-47 |
| Msa0305580 | Msa0496460 | 0.819919 | 9.018390e-53 | -8.615850e-47 |
| Msa0305580 | Msa0496470 | 0.806376 | 8.476664e-50 | -8.615850e-47 |
| Msa0305580 | Msa0509510 | 0.805144 | 1.538313e-49 | -8.615850e-47 |
| Msa0305580 | Msa0521100 | 0.822080 | 2.867713e-53 | -8.615850e-47 |
| Msa0305580 | Msa0540160 | 0.804721 | 1.885419e-49 | -8.615850e-47 |
| Msa0305580 | Msa0544930 | 0.831360 | 1.744208e-55 | -8.615850e-47 |
| Msa0305580 | Msa0549550 | 0.809848 | 1.544402e-50 | -8.615850e-47 |
| Msa0305580 | Msa0563140 | 0.814163 | 1.771873e-51 | -8.615850e-47 |
| Msa0305580 | Msa0568490 | 0.825420 | 4.732737e-54 | -8.615850e-47 |
| Msa0305580 | Msa0575540 | 0.809389 | 1.938228e-50 | -8.615850e-47 |
| Msa0305580 | Msa0623360 | 0.857969 | 1.136368e-62 | -8.615850e-47 |
| Msa0305580 | Msa0641020 | 0.819891 | 9.154206e-53 | -8.615850e-47 |
| Msa0305580 | Msa0641030 | 0.827128 | 1.856318e-54 | -8.615850e-47 |
| Msa0305580 | Msa0646180 | 0.813653 | 2.295306e-51 | -8.615850e-47 |
| Msa0305580 | Msa0679560 | 0.828469 | 8.834746e-55 | -8.615850e-47 |
| Msa0305580 | Msa0687320 | 0.804935 | 1.700899e-49 | -8.615850e-47 |
| Msa0305580 | Msa0731740 | 0.825928 | 3.587208e-54 | -8.615850e-47 |
| Msa0305580 | Msa0738600 | 0.801054 | 1.079066e-48 | -8.615850e-47 |
| Msa0305580 | Msa0751000 | 0.809061 | 2.279583e-50 | -8.615850e-47 |
| Msa0305580 | Msa0772040 | 0.806843 | 6.754492e-50 | -8.615850e-47 |
| Msa0305580 | Msa0778580 | 0.825275 | 5.122344e-54 | -8.615850e-47 |
| Msa0305580 | Msa0807980 | 0.810293 | 1.238588e-50 | -8.615850e-47 |
| Msa0305580 | Msa0812330 | -0.803812 | 2.915817e-49 | -8.615850e-47 |
| Msa0305580 | Msa0815950 | 0.821158 | 4.685400e-53 | -8.615850e-47 |
| Msa0305580 | Msa0818950 | 0.804512 | 2.085093e-49 | -8.615850e-47 |
| Msa0305580 | Msa0850520 | 0.820757 | 5.795523e-53 | -8.615850e-47 |
| Msa0305580 | Msa0883390 | 0.817277 | 3.585000e-52 | -8.615850e-47 |
| Msa0305580 | Msa0883410 | 0.805692 | 1.180486e-49 | -8.615850e-47 |
| Msa0305580 | Msa0883430 | 0.803072 | 4.150517e-49 | -8.615850e-47 |
| Msa0305580 | Msa0883670 | 0.810226 | 1.280488e-50 | -8.615850e-47 |
| Msa0305580 | Msa0930090 | 0.804996 | 1.651644e-49 | -8.615850e-47 |
| Msa0305580 | Msa0957800 | 0.809850 | 1.543096e-50 | -8.615850e-47 |
| Msa0305580 | Msa0984820 | 0.801196 | 1.009188e-48 | -8.615850e-47 |
| Msa0305580 | Msa0984830 | 0.817017 | 4.100341e-52 | -8.615850e-47 |
| Msa0305580 | Msa0984850 | 0.810968 | 8.854842e-51 | -8.615850e-47 |
| Msa0305580 | Msa0985040 | 0.825194 | 5.353350e-54 | -8.615850e-47 |
| Msa0305580 | Msa1016130 | 0.835026 | 2.131699e-56 | -8.615850e-47 |
| Msa0305580 | Msa1038820 | 0.808117 | 3.626444e-50 | -8.615850e-47 |
| Msa0305580 | Msa1041550 | 0.873077 | 1.944067e-67 | -8.615850e-47 |
| Msa0305580 | Msa1049440 | 0.807562 | 4.757093e-50 | -8.615850e-47 |
| Msa0305580 | Msa1055710 | 0.826829 | 2.188706e-54 | -8.615850e-47 |
| Msa0305580 | Msa1081530 | 0.895597 | 8.237860e-76 | -8.615850e-47 |
| Msa0305580 | Msa1108530 | 0.827118 | 1.866358e-54 | -8.615850e-47 |
| Msa0305580 | Msa1108780 | 0.835991 | 1.215540e-56 | -8.615850e-47 |
| Msa0305580 | Msa1123340 | 0.812087 | 5.056395e-51 | -8.615850e-47 |
| Msa0305580 | Msa1132320 | 0.810540 | 1.095493e-50 | -8.615850e-47 |
| Msa0305580 | Msa1152280 | 0.836847 | 7.359202e-57 | -8.615850e-47 |
| Msa0305580 | Msa1166450 | 0.857156 | 1.977714e-62 | -8.615850e-47 |
| Msa0305580 | Msa1190460 | 0.800820 | 1.204314e-48 | -8.615850e-47 |
| Msa0305580 | Msa1199750 | 0.809121 | 2.213248e-50 | -8.615850e-47 |
| Msa0305580 | Msa1203090 | 0.800506 | 1.396086e-48 | -8.615850e-47 |
| Msa0305580 | Msa1204110 | 0.823526 | 1.320889e-53 | -8.615850e-47 |
| Msa0305580 | Msa1208250 | 0.803786 | 2.952646e-49 | -8.615850e-47 |
| Msa0305580 | Msa1215660 | 0.828497 | 8.698883e-55 | -8.615850e-47 |
| Msa0305580 | Msa1216700 | 0.811183 | 7.954086e-51 | -8.615850e-47 |
| Msa0305580 | Msa1216900 | 0.809265 | 2.060607e-50 | -8.615850e-47 |
| Msa0305580 | Msa1221370 | 0.801435 | 9.015523e-49 | -8.615850e-47 |
| Msa0305580 | Msa1223510 | 0.832315 | 1.013705e-55 | -8.615850e-47 |
| Msa0305580 | Msa1232330 | 0.800854 | 1.185651e-48 | -8.615850e-47 |
| Msa0305580 | Msa1242430 | 0.801227 | 9.944277e-49 | -8.615850e-47 |
| Msa0305580 | Msa1244300 | 0.803405 | 3.540762e-49 | -8.615850e-47 |
| Msa0305580 | Msa1262740 | 0.800855 | 1.185040e-48 | -8.615850e-47 |
| Msa0305580 | Msa1263610 | 0.860266 | 2.328749e-63 | -8.615850e-47 |
| Msa0305580 | Msa1266720 | 0.818841 | 1.588025e-52 | -8.615850e-47 |
| Msa0305580 | Msa1275340 | 0.800430 | 1.446477e-48 | -8.615850e-47 |
| Msa0305580 | Msa1276070 | 0.818133 | 2.297739e-52 | -8.615850e-47 |
| Msa0305580 | Msa1287160 | 0.824427 | 8.119077e-54 | -8.615850e-47 |
| Msa0305580 | Msa1287340 | 0.818238 | 2.175391e-52 | -8.615850e-47 |
| Msa0305580 | Msa1307800 | 0.803505 | 3.376972e-49 | -8.615850e-47 |
| Msa0305580 | Msa1328600 | 0.813774 | 2.158927e-51 | -8.615850e-47 |
| Msa0305580 | Msa1329660 | 0.800899 | 1.160862e-48 | -8.615850e-47 |
| Msa0305580 | Msa1331730 | 0.800113 | 1.678427e-48 | -8.615850e-47 |
| Msa0305580 | Msa1343310 | 0.823549 | 1.304857e-53 | -8.615850e-47 |
| Msa0305580 | Msa1353280 | 0.802027 | 6.817735e-49 | -8.615850e-47 |
| Msa0305580 | Msa1357380 | 0.809754 | 1.617986e-50 | -8.615850e-47 |
| Msa0305580 | Msa1357720 | 0.885123 | 1.066601e-71 | -8.615850e-47 |
| Msa0305580 | Msa1359880 | 0.809691 | 1.669214e-50 | -8.615850e-47 |
| Msa0305580 | Msa1360380 | 0.806568 | 7.721238e-50 | -8.615850e-47 |
| Msa0305580 | Msa1370630 | 0.817477 | 3.231588e-52 | -8.615850e-47 |
| Msa0305580 | Msa1381720 | 0.800595 | 1.338704e-48 | -8.615850e-47 |
| Msa0305580 | Msa1400600 | 0.836233 | 1.055073e-56 | -8.615850e-47 |
| Msa0305580 | Msa1405190 | 0.831396 | 1.708978e-55 | -8.615850e-47 |
| Msa0305580 | Msa1405470 | 0.838377 | 2.980960e-57 | -8.615850e-47 |
| Msa0305580 | Msa1407200 | 0.829792 | 4.221942e-55 | -8.615850e-47 |
| Msa0305580 | Msa1409050 | 0.830692 | 2.544397e-55 | -8.615850e-47 |
| Msa0305580 | Msa1409760 | 0.831883 | 1.296923e-55 | -8.615850e-47 |
| Msa0305580 | Msa1415120 | 0.832713 | 8.080851e-56 | -8.615850e-47 |
| Msa0305580 | Msa1428440 | 0.829489 | 5.002819e-55 | -8.615850e-47 |
| Msa0305580 | Msa1433380 | 0.818502 | 1.895573e-52 | -8.615850e-47 |
| Msa0305580 | Msa1439160 | 0.819668 | 1.029168e-52 | -8.615850e-47 |
| Msa0305580 | Msa1445250 | 0.833710 | 4.562048e-56 | -8.615850e-47 |
| Msa0305580 | Msa1457450 | 0.829617 | 4.657121e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0305580 | MtrunA17_Chr2g0333811 | 98.716 | 545 | 7 | 0 | 1 | 545 | 1 | 545 | 0.0 | 1094 |
| Msa0305580 | MtrunA17_Chr3g0124991 | 59.010 | 505 | 196 | 2 | 41 | 537 | 30 | 531 | 0.0 | 617 |
| Msa0305580 | MtrunA17_Chr3g0124971 | 58.869 | 513 | 201 | 3 | 30 | 537 | 31 | 538 | 0.0 | 588 |
| Msa0305580 | MtrunA17_Chr3g0134491 | 41.542 | 467 | 251 | 8 | 32 | 492 | 55 | 505 | 2.83e-107 | 331 |
| Msa0305580 | MtrunA17_Chr4g0053701 | 42.890 | 436 | 229 | 8 | 30 | 456 | 40 | 464 | 3.41e-106 | 328 |
| Msa0305580 | MtrunA17_Chr5g0401611 | 41.667 | 456 | 244 | 8 | 44 | 492 | 51 | 491 | 6.17e-106 | 327 |
| Msa0305580 | MtrunA17_Chr8g0347551 | 38.166 | 469 | 263 | 10 | 33 | 492 | 72 | 522 | 7.09e-97 | 305 |
| Msa0305580 | MtrunA17_Chr7g0264231 | 26.601 | 406 | 266 | 12 | 54 | 452 | 38 | 418 | 1.69e-32 | 133 |
| Msa0305580 | MtrunA17_Chr2g0309271 | 27.344 | 384 | 248 | 13 | 90 | 464 | 3 | 364 | 1.03e-31 | 127 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0305580 | AT1G15960.1 | 79.238 | 525 | 96 | 2 | 16 | 538 | 6 | 519 | 0.0 | 859 |
| Msa0305580 | AT1G80830.1 | 77.289 | 546 | 109 | 4 | 1 | 545 | 1 | 532 | 0.0 | 855 |
| Msa0305580 | AT1G80830.2 | 77.289 | 546 | 109 | 4 | 1 | 545 | 1 | 532 | 0.0 | 855 |
| Msa0305580 | AT5G67330.1 | 41.943 | 422 | 231 | 6 | 42 | 456 | 46 | 460 | 2.18e-105 | 326 |
| Msa0305580 | AT1G47240.1 | 39.958 | 473 | 261 | 9 | 30 | 496 | 53 | 508 | 4.91e-105 | 325 |
| Msa0305580 | AT2G23150.1 | 40.263 | 457 | 253 | 8 | 44 | 494 | 52 | 494 | 2.28e-101 | 315 |
| Msa0305580 | AT4G18790.1 | 38.737 | 475 | 257 | 11 | 30 | 492 | 54 | 506 | 7.23e-97 | 304 |
| Msa0305580 | AT5G03280.1 | 27.865 | 384 | 248 | 9 | 54 | 427 | 24 | 388 | 1.10e-33 | 137 |
Find 141 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGTCATTTGCTGACTTTC+AGG | 0.118858 | 2_3:+63412927 | None:intergenic |
| ATTGGTGGCTCTGCTGGGGC+TGG | 0.172769 | 2_3:-63413955 | Msa0305580:CDS |
| GATAATCGGTTCTCTTATTA+TGG | 0.190853 | 2_3:-63413135 | Msa0305580:CDS |
| TGGACTGATTCTAATTATAT+TGG | 0.207669 | 2_3:-63412650 | Msa0305580:three_prime_UTR |
| TTCAGGCATGGCAGTATATT+TGG | 0.208592 | 2_3:-63413015 | Msa0305580:CDS |
| TTGGTGGCTCTGCTGGGGCT+GGG | 0.236113 | 2_3:-63413954 | Msa0305580:CDS |
| GCGGTCATTGGTGGCTCTGC+TGG | 0.238481 | 2_3:-63413961 | Msa0305580:CDS |
| GGGTGTCAAACTTTATTCTT+TGG | 0.241037 | 2_3:-63415511 | Msa0305580:CDS |
| GCCCCAGGTTGTTCTAATTC+TGG | 0.243790 | 2_3:-63416620 | Msa0305580:CDS |
| GATCTTATCTTACAGTTTCC+TGG | 0.244897 | 2_3:+63415975 | None:intergenic |
| AGAAAGTGCCTTTGCTCTTA+TGG | 0.256302 | 2_3:-63414516 | Msa0305580:CDS |
| CTCTTAGCATTACAGCAATA+TGG | 0.276711 | 2_3:-63415140 | Msa0305580:CDS |
| TGGTGGCTCTGCTGGGGCTG+GGG | 0.283239 | 2_3:-63413953 | Msa0305580:CDS |
| AGAGTTGACAATAGATTTGT+AGG | 0.285885 | 2_3:-63412742 | Msa0305580:three_prime_UTR |
| ATGACAAATGAACAAGTAAA+TGG | 0.298259 | 2_3:-63412912 | Msa0305580:CDS |
| TTTGCTGCAGAAAGAGAATA+TGG | 0.299195 | 2_3:-63416645 | Msa0305580:intron |
| AAGGTGTTTCTTGGGATATT+AGG | 0.304324 | 2_3:-63413041 | Msa0305580:CDS |
| AAATGGAGTTCAAAATTGTT+TGG | 0.313605 | 2_3:-63414244 | Msa0305580:CDS |
| CTTAGAATGTCTTGGGGAAA+TGG | 0.318045 | 2_3:-63414261 | Msa0305580:intron |
| TCATGTGATGCCTATCATAA+TGG | 0.322662 | 2_3:-63412670 | Msa0305580:three_prime_UTR |
| TAAAGAGGGTACACACCTTT+TGG | 0.324952 | 2_3:-63412961 | Msa0305580:CDS |
| TGATCTTCTTCATTTATATT+CGG | 0.330046 | 2_3:+63414437 | None:intergenic |
| GCCAATCTTGGAGTGGTTAC+TGG | 0.337193 | 2_3:-63415659 | Msa0305580:intron |
| GGTCTTGCAATTTCTCTCCT+TGG | 0.337870 | 2_3:-63414873 | Msa0305580:CDS |
| TCCGCCATTACTTGGATAAT+CGG | 0.341900 | 2_3:-63413149 | Msa0305580:CDS |
| TGCTCTTCAACGTACCTGTT+TGG | 0.342285 | 2_3:-63415199 | Msa0305580:CDS |
| TCAGTTACTTTGGATCATAT+TGG | 0.346866 | 2_3:-63415720 | Msa0305580:intron |
| CGGTCATTGGTGGCTCTGCT+GGG | 0.355327 | 2_3:-63413960 | Msa0305580:CDS |
| GGAATTGCTTTGCTTGCATC+AGG | 0.359030 | 2_3:-63414223 | Msa0305580:CDS |
| ATTTGAGCTTCCCTTTGCTT+TGG | 0.359502 | 2_3:-63413505 | Msa0305580:CDS |
| ACTCGGCATTGGTACTTTCC+AGG | 0.364353 | 2_3:-63414728 | Msa0305580:CDS |
| ATTGTGGCCAAGGTGTTTCT+TGG | 0.367006 | 2_3:-63413050 | Msa0305580:CDS |
| GGACTGATTCTAATTATATT+GGG | 0.368823 | 2_3:-63412649 | Msa0305580:three_prime_UTR |
| GCCATTACTTAGAATGTCTT+GGG | 0.369772 | 2_3:-63414268 | Msa0305580:intron |
| CAATCGATGGCTGCCAATCT+TGG | 0.372875 | 2_3:-63415671 | Msa0305580:CDS |
| TGCAGATATCCGCCATTACT+TGG | 0.375632 | 2_3:-63413157 | Msa0305580:intron |
| AGTTTGATTGTTGCGGTCAT+TGG | 0.376126 | 2_3:-63413973 | Msa0305580:CDS |
| AACAATCAAACTAGGAACTA+TGG | 0.376164 | 2_3:+63413984 | None:intergenic |
| GGTGTCAAACTTTATTCTTT+GGG | 0.378048 | 2_3:-63415510 | Msa0305580:CDS |
| GGTCAAAGTTCTACGATAAC+AGG | 0.379774 | 2_3:-63414202 | Msa0305580:CDS |
| GTTTCTGTTATTTCTGTAAG+TGG | 0.391479 | 2_3:-63414476 | Msa0305580:CDS |
| AATTTCTCTCCTTGGTGCTA+TGG | 0.403043 | 2_3:-63414865 | Msa0305580:CDS |
| TCTTAGCATTACAGCAATAT+GGG | 0.404272 | 2_3:-63415139 | Msa0305580:CDS |
| TACGACTGACACCATGGATT+CGG | 0.407918 | 2_3:-63414029 | Msa0305580:CDS |
| TTGTGGCCAAGGTGTTTCTT+GGG | 0.420309 | 2_3:-63413049 | Msa0305580:CDS |
| TGGGATGTCACAGGCCACTA+TGG | 0.423728 | 2_3:+63415472 | None:intergenic |
| AATATATACTACTTAATGAA+TGG | 0.424385 | 2_3:-63413107 | Msa0305580:CDS |
| TAGAATCAGTCCATTATGAT+AGG | 0.430753 | 2_3:+63412660 | None:intergenic |
| CAAAGGGAAGCTCAAATGAT+AGG | 0.430883 | 2_3:+63413511 | None:intergenic |
| GTTGAGACGGATCTACAATC+TGG | 0.432234 | 2_3:-63415856 | Msa0305580:CDS |
| AACAATTTGATCAGTATTTG+TGG | 0.441465 | 2_3:+63416535 | None:intergenic |
| TGCCATTACTTAGAATGTCT+TGG | 0.443971 | 2_3:-63414269 | Msa0305580:intron |
| ACCAGTAACCACTCCAAGAT+TGG | 0.444301 | 2_3:+63415658 | None:intergenic |
| AATTCATCTCAATACCTTCT+GGG | 0.447355 | 2_3:+63415453 | None:intergenic |
| TTTACAACTTCTTTAGCATC+AGG | 0.449320 | 2_3:+63414936 | None:intergenic |
| ACGTTCAGTTCGCGGAATCA+AGG | 0.457249 | 2_3:-63414697 | Msa0305580:intron |
| CTAAAAGGGAGTGGTGCTAC+TGG | 0.461708 | 2_3:-63414894 | Msa0305580:CDS |
| TTATTTGCATACATGGGGCC+TGG | 0.468558 | 2_3:-63416026 | Msa0305580:CDS |
| TCCATTGCATACATAGATCC+AGG | 0.477792 | 2_3:-63415993 | Msa0305580:CDS |
| ACGATAACAGGAACCTATGC+AGG | 0.487911 | 2_3:-63414190 | Msa0305580:CDS |
| CCACAATTCATTTCAAGCAC+TGG | 0.491584 | 2_3:-63416593 | Msa0305580:CDS |
| TATTGCTGAAATTGCCATAG+TGG | 0.492449 | 2_3:-63415486 | Msa0305580:CDS |
| AAAATACCACGTTCAGTTCG+CGG | 0.494048 | 2_3:-63414705 | Msa0305580:CDS |
| GTTAACATGTACACCCATCT+TGG | 0.495254 | 2_3:+63413452 | None:intergenic |
| GTTACTTTGGATCATATTGG+TGG | 0.496123 | 2_3:-63415717 | Msa0305580:CDS |
| TCTCTTCCTGCACTCGGCAT+TGG | 0.496228 | 2_3:-63414739 | Msa0305580:CDS |
| TTCAACGTACCTGTTTGGAT+TGG | 0.497509 | 2_3:-63415194 | Msa0305580:CDS |
| GATGCTAAAGAAGTTGTAAA+GGG | 0.498286 | 2_3:-63414933 | Msa0305580:CDS |
| CACTAGTAGCAAAACCAAGA+TGG | 0.501607 | 2_3:-63413466 | Msa0305580:CDS |
| TATTGGGAACATGTGTGAAA+AGG | 0.509568 | 2_3:-63412633 | Msa0305580:three_prime_UTR |
| GAGCATCAATGTGCTGAGTC+CGG | 0.509577 | 2_3:+63415160 | None:intergenic |
| AGATTGCGTACCAAAGATGT+AGG | 0.511625 | 2_3:+63416905 | None:intergenic |
| AGTAGCACACCAATCCAAAC+AGG | 0.511891 | 2_3:+63415185 | None:intergenic |
| TGATGCTAAAGAAGTTGTAA+AGG | 0.519740 | 2_3:-63414934 | Msa0305580:CDS |
| AGAAGATCAAATGAGCTGTC+AGG | 0.522894 | 2_3:-63414423 | Msa0305580:CDS |
| TTGATTGTTGCGGTCATTGG+TGG | 0.523728 | 2_3:-63413970 | Msa0305580:CDS |
| AGTTCCTAGTTTGATTGTTG+CGG | 0.526493 | 2_3:-63413980 | Msa0305580:CDS |
| TGTACATGTTAACTCTATCA+TGG | 0.528201 | 2_3:-63413442 | Msa0305580:intron |
| CAAAAGAAGAGAGAGTGAGA+AGG | 0.528237 | 2_3:-63416946 | Msa0305580:five_prime_UTR |
| GGTGTCAATAAGCGGAGCAT+TGG | 0.534596 | 2_3:+63416556 | None:intergenic |
| TGACATAGAAATTGTGGCCA+AGG | 0.536322 | 2_3:-63413060 | Msa0305580:CDS |
| TCATAGTGACATAGAAATTG+TGG | 0.537613 | 2_3:-63413066 | Msa0305580:CDS |
| TGGATTGGTGTGCTACTGAC+CGG | 0.537679 | 2_3:-63415179 | Msa0305580:CDS |
| TTGAGACGGATCTACAATCT+GGG | 0.537839 | 2_3:-63415855 | Msa0305580:CDS |
| TGGGGCACAATATAAATATG+AGG | 0.538942 | 2_3:-63415836 | Msa0305580:intron |
| AAAAGAAGAGAGAGTGAGAA+GGG | 0.543589 | 2_3:-63416945 | Msa0305580:five_prime_UTR |
| TGCAGGGCAGTATGTCATGC+AGG | 0.544266 | 2_3:-63414173 | Msa0305580:intron |
| GCAATGGAAACAAGAAATCC+AGG | 0.544675 | 2_3:+63416008 | None:intergenic |
| AAAGTACCAATGCCGAGTGC+AGG | 0.550845 | 2_3:+63414733 | None:intergenic |
| AAGTGCCTTTGCTCTTATGG+TGG | 0.551298 | 2_3:-63414513 | Msa0305580:CDS |
| GGCATGGCAGTATATTTGGC+CGG | 0.551698 | 2_3:-63413011 | Msa0305580:CDS |
| AGCAATTGTAAACACAAGAA+AGG | 0.554039 | 2_3:+63414992 | None:intergenic |
| AAGCACAAGATATGCTATAC+CGG | 0.555109 | 2_3:+63412992 | None:intergenic |
| AAATAACAGAAACATTTATG+AGG | 0.555460 | 2_3:+63414486 | None:intergenic |
| AGGTTTCACATACTCTAAGT+AGG | 0.556394 | 2_3:+63414375 | None:intergenic |
| TCCTGGATCTATGTATGCAA+TGG | 0.557782 | 2_3:+63415992 | None:intergenic |
| AAAATTTATTTGCATACATG+GGG | 0.559327 | 2_3:-63416031 | Msa0305580:CDS |
| TGTCCAGAATTAGAACAACC+TGG | 0.566138 | 2_3:+63416617 | None:intergenic |
| TTGATTCCGCGAACTGAACG+TGG | 0.568877 | 2_3:+63414699 | None:intergenic |
| AATACCTTCTGGGATGTCAC+AGG | 0.569404 | 2_3:+63415463 | None:intergenic |
| ATAATCACTTGCAGTTGAGA+CGG | 0.574710 | 2_3:-63415869 | Msa0305580:intron |
| AGGAGTGGTACCAAAGCAAA+GGG | 0.575001 | 2_3:+63413495 | None:intergenic |
| ACTAGTAGCAAAACCAAGAT+GGG | 0.576135 | 2_3:-63413465 | Msa0305580:CDS |
| GTGCCGCAACTAAAAGGGAG+TGG | 0.578359 | 2_3:-63414903 | Msa0305580:CDS |
| GAGGAGTGGTACCAAAGCAA+AGG | 0.578409 | 2_3:+63413494 | None:intergenic |
| TGCTCTTGTAATTCAATCGA+TGG | 0.578489 | 2_3:-63415684 | Msa0305580:CDS |
| CAGGTGCTGTTAGAGCCAAA+AGG | 0.580978 | 2_3:+63412946 | None:intergenic |
| AAAGAGAATATGGCTGCCCC+AGG | 0.582222 | 2_3:-63416635 | Msa0305580:exon |
| GTCCAGAATTAGAACAACCT+GGG | 0.583047 | 2_3:+63416618 | None:intergenic |
| CATGACATACTGCCCTGCAT+AGG | 0.585306 | 2_3:+63414177 | None:intergenic |
| ATTGTAGAGCTGAATATTCG+CGG | 0.585585 | 2_3:-63415532 | Msa0305580:CDS |
| ATGACCGCAACAATCAAACT+AGG | 0.585887 | 2_3:+63413976 | None:intergenic |
| CCAGTGCTTGAAATGAATTG+TGG | 0.588224 | 2_3:+63416593 | None:intergenic |
| CAATAAGCGGAGCATTGGAA+AGG | 0.588722 | 2_3:+63416561 | None:intergenic |
| GTTAGCATATTCCGAATCCA+TGG | 0.596442 | 2_3:+63414018 | None:intergenic |
| GTCAATTAGAAGATTTAATG+CGG | 0.597156 | 2_3:+63412597 | None:intergenic |
| TTGATTTACGACTGACACCA+TGG | 0.598584 | 2_3:-63414035 | Msa0305580:CDS |
| TTCACATACTCTAAGTAGGA+AGG | 0.602936 | 2_3:+63414379 | None:intergenic |
| TTGTAGAGCTGAATATTCGC+GGG | 0.603523 | 2_3:-63415531 | Msa0305580:CDS |
| TATATTCGGAGAATTGCAAA+CGG | 0.605578 | 2_3:+63414451 | None:intergenic |
| GAAGAGCATATTTAACGCAA+AGG | 0.606833 | 2_3:+63415214 | None:intergenic |
| CCACAATCTCTTCCTGCACT+CGG | 0.612477 | 2_3:-63414745 | Msa0305580:CDS |
| TAATATCCCAAGAAACACCT+TGG | 0.615738 | 2_3:+63413043 | None:intergenic |
| AGAACCGATTATCCAAGTAA+TGG | 0.617458 | 2_3:+63413145 | None:intergenic |
| GAAAGCCACCATAAGAGCAA+AGG | 0.627298 | 2_3:+63414508 | None:intergenic |
| CCGAGTGCAGGAAGAGATTG+TGG | 0.627483 | 2_3:+63414745 | None:intergenic |
| GGTCATTGGTGGCTCTGCTG+GGG | 0.630348 | 2_3:-63413959 | Msa0305580:CDS |
| TTGTTTGTTTGGATTCTGAG+TGG | 0.634266 | 2_3:+63416976 | None:intergenic |
| GATTGCGTACCAAAGATGTA+GGG | 0.635554 | 2_3:+63416906 | None:intergenic |
| CCATTACTTAGAATGTCTTG+GGG | 0.636359 | 2_3:-63414267 | Msa0305580:intron |
| ACCGATTATCCAAGTAATGG+CGG | 0.641211 | 2_3:+63413148 | None:intergenic |
| GTATTTGTGGTGTCAATAAG+CGG | 0.647238 | 2_3:+63416548 | None:intergenic |
| CTTAGCATTACAGCAATATG+GGG | 0.651366 | 2_3:-63415138 | Msa0305580:intron |
| CTACTAGTGAACTTGAGGAG+TGG | 0.652111 | 2_3:+63413480 | None:intergenic |
| GTGGCCTGTGACATCCCAGA+AGG | 0.672235 | 2_3:-63415467 | Msa0305580:intron |
| CGATAACAGGAACCTATGCA+GGG | 0.673315 | 2_3:-63414189 | Msa0305580:CDS |
| GATGGCTGCCAATCTTGGAG+TGG | 0.683939 | 2_3:-63415666 | Msa0305580:CDS |
| TCCAGAATTAGAACAACCTG+GGG | 0.695837 | 2_3:+63416619 | None:intergenic |
| TCTGCTGGACTACTTCTCTG+AGG | 0.723987 | 2_3:+63412843 | None:intergenic |
| TGAGACGGATCTACAATCTG+GGG | 0.726732 | 2_3:-63415854 | Msa0305580:CDS |
| ACGGCATAACCATAGCACCA+AGG | 0.756062 | 2_3:+63414856 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAAAAAAAAAAATAA+GGG | + | chr2_3:63413125-63413144 | None:intergenic | 0.0% |
| !! | AAAAATTTATTTGCATACAT+GGG | - | chr2_3:63413566-63413585 | Msa0305580:intron | 15.0% |
| !!! | TTTTACTTTTAATAAAGTTG+TGG | - | chr2_3:63413981-63414000 | Msa0305580:CDS | 15.0% |
| !! | ACTTTATATACAATTGTTAT+TGG | - | chr2_3:63415266-63415285 | Msa0305580:intron | 15.0% |
| !! | AACAACTAGAAAAAAAATTA+TGG | + | chr2_3:63415705-63415724 | None:intergenic | 15.0% |
| !!! | AATTTTTTTTCTAGTTGTTT+TGG | - | chr2_3:63415706-63415725 | Msa0305580:CDS | 15.0% |
| !! | AATATATACTACTTAATGAA+TGG | - | chr2_3:63416491-63416510 | Msa0305580:intron | 15.0% |
| !! | AATTAGAAGAAGAAGAAAAT+TGG | + | chr2_3:63412822-63412841 | None:intergenic | 20.0% |
| !!! | CTCTTTCAAAACATTTTATT+TGG | - | chr2_3:63413388-63413407 | Msa0305580:intron | 20.0% |
| !! | ATAGAAAACACATAAATGAA+TGG | + | chr2_3:63413527-63413546 | None:intergenic | 20.0% |
| !! | GAAAAATTTATTTGCATACA+TGG | - | chr2_3:63413565-63413584 | Msa0305580:intron | 20.0% |
| !! | AAAATTTATTTGCATACATG+GGG | - | chr2_3:63413567-63413586 | Msa0305580:intron | 20.0% |
| !!! | ATAAACACACTACATTTTAT+AGG | - | chr2_3:63414212-63414231 | Msa0305580:CDS | 20.0% |
| !!! | TAAACACACTACATTTTATA+GGG | - | chr2_3:63414213-63414232 | Msa0305580:CDS | 20.0% |
| !!! | CTTAAGGCTTTATAAAAATT+TGG | + | chr2_3:63414264-63414283 | None:intergenic | 20.0% |
| !!! | CATATTTTCCATTTTTCTTT+CGG | - | chr2_3:63414293-63414312 | Msa0305580:intron | 20.0% |
| !!! | AGAATACATTTTAAGAGAAA+AGG | + | chr2_3:63414802-63414821 | None:intergenic | 20.0% |
| !! | ATAAATGTTGAAAGAGAAAA+AGG | + | chr2_3:63414958-63414977 | None:intergenic | 20.0% |
| !!! | ATTTAACAATTTTCTTTGAC+AGG | - | chr2_3:63415037-63415056 | Msa0305580:intron | 20.0% |
| !! | AAATAACAGAAACATTTATG+AGG | + | chr2_3:63415115-63415134 | None:intergenic | 20.0% |
| !! | TGATCTTCTTCATTTATATT+CGG | + | chr2_3:63415164-63415183 | None:intergenic | 20.0% |
| !!! | ATATACAATTGTTATTGGTA+AGG | - | chr2_3:63415271-63415290 | Msa0305580:intron | 20.0% |
| !!! | CAATTTTTTTTCCTTCTTTA+GGG | - | chr2_3:63415535-63415554 | Msa0305580:CDS | 20.0% |
| !! | AACAAAAATATTTGTCAACA+TGG | - | chr2_3:63415963-63415982 | Msa0305580:intron | 20.0% |
| !!! | TTTGTCTTTTGTTGTTTGTT+TGG | + | chr2_3:63412636-63412655 | None:intergenic | 25.0% |
| ! | GATTTCAATTACATCATCTT+TGG | - | chr2_3:63412743-63412762 | Msa0305580:three_prime_UTR | 25.0% |
| ! | AACAATTTGATCAGTATTTG+TGG | + | chr2_3:63413066-63413085 | None:intergenic | 25.0% |
| ! | ATCCAAAGTAACTGAAAAAA+TGG | + | chr2_3:63413873-63413892 | None:intergenic | 25.0% |
| ! | AAATATGGTTAGTGTTCTTA+AGG | + | chr2_3:63414280-63414299 | None:intergenic | 25.0% |
| ! | CGAAAGAAAAATGGAAAATA+TGG | + | chr2_3:63414295-63414314 | None:intergenic | 25.0% |
| ! | AGTTTACTGTATTCATTCTA+TGG | - | chr2_3:63414484-63414503 | Msa0305580:CDS | 25.0% |
| ! | GATCAACAACAAAACAAAAA+TGG | + | chr2_3:63414559-63414578 | None:intergenic | 25.0% |
| !!! | TTTTTGTTTTGTTGTTGATC+AGG | - | chr2_3:63414559-63414578 | Msa0305580:intron | 25.0% |
| ! | AAGAGAAAAGGAAAACAAAA+TGG | + | chr2_3:63414790-63414809 | None:intergenic | 25.0% |
| !! | GGAAAGTACATATAGAATAA+TGG | + | chr2_3:63414829-63414848 | None:intergenic | 25.0% |
| ! | TTATGACATTACTACAATCA+CGG | + | chr2_3:63414981-63415000 | None:intergenic | 25.0% |
| ! | TTACAATATACACAAGTAAC+AGG | + | chr2_3:63415246-63415265 | None:intergenic | 25.0% |
| ! | AAATGGAGTTCAAAATTGTT+TGG | - | chr2_3:63415354-63415373 | Msa0305580:intron | 25.0% |
| ! | GAAGAATTAGAAACATCAAA+AGG | + | chr2_3:63415510-63415529 | None:intergenic | 25.0% |
| ! | AAGAAGGAAAAAAAATTGCA+GGG | + | chr2_3:63415533-63415552 | None:intergenic | 25.0% |
| ! | AAAGAAGGAAAAAAAATTGC+AGG | + | chr2_3:63415534-63415553 | None:intergenic | 25.0% |
| !!! | GCAATTTTTTTTCCTTCTTT+AGG | - | chr2_3:63415534-63415553 | Msa0305580:CDS | 25.0% |
| ! | CTAGAAAAAAAATTATGGCA+AGG | + | chr2_3:63415700-63415719 | None:intergenic | 25.0% |
| ! | AGACATATTGTCAAGTAAAA+AGG | + | chr2_3:63415752-63415771 | None:intergenic | 25.0% |
| ! | TTCCAAAATATTAGTCATAG+AGG | + | chr2_3:63416367-63416386 | None:intergenic | 25.0% |
| ! | ATGACAAATGAACAAGTAAA+TGG | - | chr2_3:63416686-63416705 | Msa0305580:intron | 25.0% |
| !! | TGGACTGATTCTAATTATAT+TGG | - | chr2_3:63416948-63416967 | Msa0305580:five_prime_UTR | 25.0% |
| !! | GGACTGATTCTAATTATATT+GGG | - | chr2_3:63416949-63416968 | Msa0305580:five_prime_UTR | 25.0% |
| ! | AAAATTGGTGAATTGAGTTG+AGG | + | chr2_3:63412807-63412826 | None:intergenic | 30.0% |
| AAGGGATTGAATGAGAATTA+AGG | + | chr2_3:63413107-63413126 | None:intergenic | 30.0% | |
| AAACAAACAACTCTTGACAT+TGG | + | chr2_3:63413496-63413515 | None:intergenic | 30.0% | |
| GAAAACACATAAATGAATGG+TGG | + | chr2_3:63413524-63413543 | None:intergenic | 30.0% | |
| ! | ATGTGTTTTCTATTTTGCAG+AGG | - | chr2_3:63413534-63413553 | Msa0305580:intron | 30.0% |
| TTATAGTACTTATGATCACG+AGG | - | chr2_3:63413807-63413826 | Msa0305580:intron | 30.0% | |
| AAATGGTGAAAAAGAGATGA+AGG | + | chr2_3:63413856-63413875 | None:intergenic | 30.0% | |
| !!! | CACCATTTTTTCAGTTACTT+TGG | - | chr2_3:63413868-63413887 | Msa0305580:intron | 30.0% |
| ! | TCAGTTACTTTGGATCATAT+TGG | - | chr2_3:63413878-63413897 | Msa0305580:intron | 30.0% |
| ! | ACTTTTAATAAAGTTGTGGC+TGG | - | chr2_3:63413985-63414004 | Msa0305580:CDS | 30.0% |
| GGTGTCAAACTTTATTCTTT+GGG | - | chr2_3:63414088-63414107 | Msa0305580:intron | 30.0% | |
| AATTCATCTCAATACCTTCT+GGG | + | chr2_3:63414148-63414167 | None:intergenic | 30.0% | |
| AAATTCATCTCAATACCTTC+TGG | + | chr2_3:63414149-63414168 | None:intergenic | 30.0% | |
| TAGGGATTTATTTAGTGCTT+AGG | - | chr2_3:63414231-63414250 | Msa0305580:CDS | 30.0% | |
| TTATTTAGTGCTTAGGATTG+AGG | - | chr2_3:63414238-63414257 | Msa0305580:CDS | 30.0% | |
| TTGTACATATATGCAGTGAT+TGG | - | chr2_3:63414356-63414375 | Msa0305580:intron | 30.0% | |
| TCTTAGCATTACAGCAATAT+GGG | - | chr2_3:63414459-63414478 | Msa0305580:CDS | 30.0% | |
| TATGGTTTGACATCATAAAG+AGG | - | chr2_3:63414502-63414521 | Msa0305580:CDS | 30.0% | |
| AGCAATTGTAAACACAAGAA+AGG | + | chr2_3:63414609-63414628 | None:intergenic | 30.0% | |
| TTTACAACTTCTTTAGCATC+AGG | + | chr2_3:63414665-63414684 | None:intergenic | 30.0% | |
| TGATGCTAAAGAAGTTGTAA+AGG | - | chr2_3:63414664-63414683 | Msa0305580:intron | 30.0% | |
| GATGCTAAAGAAGTTGTAAA+GGG | - | chr2_3:63414665-63414684 | Msa0305580:intron | 30.0% | |
| AAGAAGAGATGAAGAACTAA+CGG | + | chr2_3:63414764-63414783 | None:intergenic | 30.0% | |
| TGTCATAAGTCTGTAAATTG+TGG | - | chr2_3:63414993-63415012 | Msa0305580:CDS | 30.0% | |
| ! | TAACAATTTTCTTTGACAGG+AGG | - | chr2_3:63415040-63415059 | Msa0305580:intron | 30.0% |
| !! | GTTTCTGTTATTTCTGTAAG+TGG | - | chr2_3:63415122-63415141 | Msa0305580:intron | 30.0% |
| TATATTCGGAGAATTGCAAA+CGG | + | chr2_3:63415150-63415169 | None:intergenic | 30.0% | |
| CAAAGTGGACACAAAAAATA+CGG | + | chr2_3:63415475-63415494 | None:intergenic | 30.0% | |
| AGAAGGAAAAAAAATTGCAG+GGG | + | chr2_3:63415532-63415551 | None:intergenic | 30.0% | |
| AATCAAGAAATCCCTAAAGA+AGG | + | chr2_3:63415549-63415568 | None:intergenic | 30.0% | |
| AACAATCAAACTAGGAACTA+TGG | + | chr2_3:63415617-63415636 | None:intergenic | 30.0% | |
| !! | AAGGCATTCGAAGATATTTT+AGG | + | chr2_3:63415733-63415752 | None:intergenic | 30.0% |
| GTTCAAAAAGGATTAAGTAG+AGG | - | chr2_3:63415893-63415912 | Msa0305580:intron | 30.0% | |
| GAATGCATACACAAAGAAAA+GGG | + | chr2_3:63416004-63416023 | None:intergenic | 30.0% | |
| TGAATGCATACACAAAGAAA+AGG | + | chr2_3:63416005-63416024 | None:intergenic | 30.0% | |
| TGTACATGTTAACTCTATCA+TGG | - | chr2_3:63416156-63416175 | Msa0305580:intron | 30.0% | |
| ! | AGACTTTTAAGCTTCCAAAA+AGG | - | chr2_3:63416265-63416284 | Msa0305580:intron | 30.0% |
| ! | AAGATAAGCTATGTTTTGCA+AGG | + | chr2_3:63416337-63416356 | None:intergenic | 30.0% |
| AAAATATTAGTCATAGAGGC+GGG | + | chr2_3:63416363-63416382 | None:intergenic | 30.0% | |
| CAAAATATTAGTCATAGAGG+CGG | + | chr2_3:63416364-63416383 | None:intergenic | 30.0% | |
| ! | GATAATCGGTTCTCTTATTA+TGG | - | chr2_3:63416463-63416482 | Msa0305580:intron | 30.0% |
| TCATAGTGACATAGAAATTG+TGG | - | chr2_3:63416532-63416551 | Msa0305580:CDS | 30.0% | |
| AGAGTTGACAATAGATTTGT+AGG | - | chr2_3:63416856-63416875 | Msa0305580:intron | 30.0% | |
| CACATGAAAAATCAAAAGCT+TGG | + | chr2_3:63416915-63416934 | None:intergenic | 30.0% | |
| TAGAATCAGTCCATTATGAT+AGG | + | chr2_3:63416941-63416960 | None:intergenic | 30.0% | |
| ATTTAATGCGGAGAAAAAAC+AGG | + | chr2_3:63416992-63417011 | None:intergenic | 30.0% | |
| TTGTTTGTTTGGATTCTGAG+TGG | + | chr2_3:63412625-63412644 | None:intergenic | 35.0% | |
| AAAAGAAGAGAGAGTGAGAA+GGG | - | chr2_3:63412653-63412672 | Msa0305580:three_prime_UTR | 35.0% | |
| ! | ATTTTCTGACCCTACATCTT+TGG | - | chr2_3:63412683-63412702 | Msa0305580:three_prime_UTR | 35.0% |
| TGATGAATGAACAACATGCA+GGG | + | chr2_3:63412877-63412896 | None:intergenic | 35.0% | |
| ATGATGAATGAACAACATGC+AGG | + | chr2_3:63412878-63412897 | None:intergenic | 35.0% | |
| TTTGCTGCAGAAAGAGAATA+TGG | - | chr2_3:63412953-63412972 | Msa0305580:CDS | 35.0% | |
| ! | GTATTTGTGGTGTCAATAAG+CGG | + | chr2_3:63413053-63413072 | None:intergenic | 35.0% |
| ATTAAGGCAAACTCACATCA+GGG | + | chr2_3:63413091-63413110 | None:intergenic | 35.0% | |
| AATTAAGGCAAACTCACATC+AGG | + | chr2_3:63413092-63413111 | None:intergenic | 35.0% | |
| TTGTTTGGAAACTCAGTATC+TGG | - | chr2_3:63413143-63413162 | Msa0305580:CDS | 35.0% | |
| TGGAATTTGATCACAATAGC+TGG | + | chr2_3:63413177-63413196 | None:intergenic | 35.0% | |
| AAATACTTGCGACATTCCTT+TGG | + | chr2_3:63413257-63413276 | None:intergenic | 35.0% | |
| GTTGTATTCTCATGTCATGT+AGG | - | chr2_3:63413279-63413298 | Msa0305580:intron | 35.0% | |
| GATCTTATCTTACAGTTTCC+TGG | + | chr2_3:63413626-63413645 | None:intergenic | 35.0% | |
| ATAATCACTTGCAGTTGAGA+CGG | - | chr2_3:63413729-63413748 | Msa0305580:intron | 35.0% | |
| TGGGGCACAATATAAATATG+AGG | - | chr2_3:63413762-63413781 | Msa0305580:intron | 35.0% | |
| ! | GTTACTTTGGATCATATTGG+TGG | - | chr2_3:63413881-63413900 | Msa0305580:intron | 35.0% |
| TGCTCTTGTAATTCAATCGA+TGG | - | chr2_3:63413914-63413933 | Msa0305580:intron | 35.0% | |
| CATGTAGAACTGAATGAATC+AGG | + | chr2_3:63414018-63414037 | None:intergenic | 35.0% | |
| ATTGTAGAGCTGAATATTCG+CGG | - | chr2_3:63414066-63414085 | Msa0305580:intron | 35.0% | |
| GGGTGTCAAACTTTATTCTT+TGG | - | chr2_3:63414087-63414106 | Msa0305580:intron | 35.0% | |
| TATTGCTGAAATTGCCATAG+TGG | - | chr2_3:63414112-63414131 | Msa0305580:intron | 35.0% | |
| AAGAGAAGCCGAAAGAAAAA+TGG | + | chr2_3:63414304-63414323 | None:intergenic | 35.0% | |
| ! | GAAGAGCATATTTAACGCAA+AGG | + | chr2_3:63414387-63414406 | None:intergenic | 35.0% |
| CTCTTAGCATTACAGCAATA+TGG | - | chr2_3:63414458-63414477 | Msa0305580:CDS | 35.0% | |
| CTTAGCATTACAGCAATATG+GGG | - | chr2_3:63414460-63414479 | Msa0305580:CDS | 35.0% | |
| !!! | GTTTTGTTGTTGATCAGGTT+AGG | - | chr2_3:63414564-63414583 | Msa0305580:intron | 35.0% |
| ! | TTACAATTGCTGCGTGTTTT+TGG | - | chr2_3:63414618-63414637 | Msa0305580:intron | 35.0% |
| ! | TACAATTGCTGCGTGTTTTT+GGG | - | chr2_3:63414619-63414638 | Msa0305580:intron | 35.0% |
| ! | TTTTTGTGCCGCAACTAAAA+GGG | - | chr2_3:63414690-63414709 | Msa0305580:intron | 35.0% |
| TTCACATACTCTAAGTAGGA+AGG | + | chr2_3:63415222-63415241 | None:intergenic | 35.0% | |
| AGGTTTCACATACTCTAAGT+AGG | + | chr2_3:63415226-63415245 | None:intergenic | 35.0% | |
| TGCCATTACTTAGAATGTCT+TGG | - | chr2_3:63415329-63415348 | Msa0305580:intron | 35.0% | |
| GCCATTACTTAGAATGTCTT+GGG | - | chr2_3:63415330-63415349 | Msa0305580:intron | 35.0% | |
| CCATTACTTAGAATGTCTTG+GGG | - | chr2_3:63415331-63415350 | Msa0305580:intron | 35.0% | |
| AGGTTATCAATGCTTCAAAG+TGG | + | chr2_3:63415490-63415509 | None:intergenic | 35.0% | |
| AGTTCCTAGTTTGATTGTTG+CGG | - | chr2_3:63415618-63415637 | Msa0305580:intron | 35.0% | |
| TTTGTAACTGAGCTACATTG+TGG | - | chr2_3:63415832-63415851 | Msa0305580:intron | 35.0% | |
| ACTTTATATAACCACGTGCA+CGG | + | chr2_3:63415919-63415938 | None:intergenic | 35.0% | |
| TCTGATCAGTAGACAAAGAA+GGG | + | chr2_3:63416063-63416082 | None:intergenic | 35.0% | |
| ATCTGATCAGTAGACAAAGA+AGG | + | chr2_3:63416064-63416083 | None:intergenic | 35.0% | |
| ! | TTTTGCTACTAGTGAACTTG+AGG | + | chr2_3:63416126-63416145 | None:intergenic | 35.0% |
| ACTAGTAGCAAAACCAAGAT+GGG | - | chr2_3:63416133-63416152 | Msa0305580:intron | 35.0% | |
| TGGAAGCTTAAAAGTCTCTT+TGG | + | chr2_3:63416262-63416281 | None:intergenic | 35.0% | |
| CTTCCAAAAAGGTCAGAAAT+GGG | - | chr2_3:63416276-63416295 | Msa0305580:intron | 35.0% | |
| CTACTATCTGTCATTGTCAT+AGG | + | chr2_3:63416302-63416321 | None:intergenic | 35.0% | |
| CTATGACAATGACAGATAGT+AGG | - | chr2_3:63416300-63416319 | Msa0305580:intron | 35.0% | |
| ! | CGCCTCTATGACTAATATTT+TGG | - | chr2_3:63416362-63416381 | Msa0305580:intron | 35.0% |
| AGAACCGATTATCCAAGTAA+TGG | + | chr2_3:63416456-63416475 | None:intergenic | 35.0% | |
| TAATATCCCAAGAAACACCT+TGG | + | chr2_3:63416558-63416577 | None:intergenic | 35.0% | |
| ! | AAGGTGTTTCTTGGGATATT+AGG | - | chr2_3:63416557-63416576 | Msa0305580:CDS | 35.0% |
| ! | CTTGGGATATTAGGATTTTC+AGG | - | chr2_3:63416566-63416585 | Msa0305580:CDS | 35.0% |
| !! | GATATTAGGATTTTCAGGCA+TGG | - | chr2_3:63416571-63416590 | Msa0305580:CDS | 35.0% |
| AAGCACAAGATATGCTATAC+CGG | + | chr2_3:63416609-63416628 | None:intergenic | 35.0% | |
| TGTGCTTCGCAAAAATAAAG+AGG | - | chr2_3:63416622-63416641 | Msa0305580:CDS | 35.0% | |
| GTGCTTCGCAAAAATAAAGA+GGG | - | chr2_3:63416623-63416642 | Msa0305580:CDS | 35.0% | |
| !! | TTTGTCATTTGCTGACTTTC+AGG | + | chr2_3:63416674-63416693 | None:intergenic | 35.0% |
| !!! | TTTTTTCAGTCAAGATCTGC+TGG | + | chr2_3:63416773-63416792 | None:intergenic | 35.0% |
| ! | ACTGTCTTTTGACATCACTT+AGG | - | chr2_3:63416881-63416900 | Msa0305580:intron | 35.0% |
| TCATGTGATGCCTATCATAA+TGG | - | chr2_3:63416928-63416947 | Msa0305580:five_prime_UTR | 35.0% | |
| TATTGGGAACATGTGTGAAA+AGG | - | chr2_3:63416965-63416984 | Msa0305580:five_prime_UTR | 35.0% | |
| CAAAAGAAGAGAGAGTGAGA+AGG | - | chr2_3:63412652-63412671 | Msa0305580:three_prime_UTR | 40.0% | |
| GATTGCGTACCAAAGATGTA+GGG | + | chr2_3:63412695-63412714 | None:intergenic | 40.0% | |
| AGATTGCGTACCAAAGATGT+AGG | + | chr2_3:63412696-63412715 | None:intergenic | 40.0% | |
| TCCAGAATTAGAACAACCTG+GGG | + | chr2_3:63412982-63413001 | None:intergenic | 40.0% | |
| GTCCAGAATTAGAACAACCT+GGG | + | chr2_3:63412983-63413002 | None:intergenic | 40.0% | |
| TGTCCAGAATTAGAACAACC+TGG | + | chr2_3:63412984-63413003 | None:intergenic | 40.0% | |
| CCAGTGCTTGAAATGAATTG+TGG | + | chr2_3:63413008-63413027 | None:intergenic | 40.0% | |
| CCACAATTCATTTCAAGCAC+TGG | - | chr2_3:63413005-63413024 | Msa0305580:CDS | 40.0% | |
| CAAATTCCACTGTCCACTAA+CGG | - | chr2_3:63413188-63413207 | Msa0305580:intron | 40.0% | |
| AAATTCCACTGTCCACTAAC+GGG | - | chr2_3:63413189-63413208 | Msa0305580:intron | 40.0% | |
| TCATGTCATGTAGGAGTTTC+AGG | - | chr2_3:63413288-63413307 | Msa0305580:intron | 40.0% | |
| CATGTCATGTAGGAGTTTCA+GGG | - | chr2_3:63413289-63413308 | Msa0305580:intron | 40.0% | |
| ! | AAATGAGTTGAGTCGAGGTT+TGG | - | chr2_3:63413313-63413332 | Msa0305580:intron | 40.0% |
| ATCATAGCTCGTAGATAGCT+AGG | + | chr2_3:63413449-63413468 | None:intergenic | 40.0% | |
| GCAATGGAAACAAGAAATCC+AGG | + | chr2_3:63413593-63413612 | None:intergenic | 40.0% | |
| TCCATTGCATACATAGATCC+AGG | - | chr2_3:63413605-63413624 | Msa0305580:intron | 40.0% | |
| TCCTGGATCTATGTATGCAA+TGG | + | chr2_3:63413609-63413628 | None:intergenic | 40.0% | |
| TTGAGACGGATCTACAATCT+GGG | - | chr2_3:63413743-63413762 | Msa0305580:intron | 40.0% | |
| TTGTAGAGCTGAATATTCGC+GGG | - | chr2_3:63414067-63414086 | Msa0305580:intron | 40.0% | |
| TTCAACGTACCTGTTTGGAT+TGG | - | chr2_3:63414404-63414423 | Msa0305580:CDS | 40.0% | |
| ! | CTTTTTGTGCCGCAACTAAA+AGG | - | chr2_3:63414689-63414708 | Msa0305580:intron | 40.0% |
| !! | AATTTCTCTCCTTGGTGCTA+TGG | - | chr2_3:63414733-63414752 | Msa0305580:CDS | 40.0% |
| ! | AACTGAACGTGGTATTTTCC+TGG | + | chr2_3:63414891-63414910 | None:intergenic | 40.0% |
| AAAATACCACGTTCAGTTCG+CGG | - | chr2_3:63414893-63414912 | Msa0305580:CDS | 40.0% | |
| !! | AGAAAGTGCCTTTGCTCTTA+TGG | - | chr2_3:63415082-63415101 | Msa0305580:intron | 40.0% |
| AGAAGATCAAATGAGCTGTC+AGG | - | chr2_3:63415175-63415194 | Msa0305580:CDS | 40.0% | |
| CCCCAAGACATTCTAAGTAA+TGG | + | chr2_3:63415334-63415353 | None:intergenic | 40.0% | |
| CTTAGAATGTCTTGGGGAAA+TGG | - | chr2_3:63415337-63415356 | Msa0305580:intron | 40.0% | |
| GGTCAAAGTTCTACGATAAC+AGG | - | chr2_3:63415396-63415415 | Msa0305580:intron | 40.0% | |
| TTGATTTACGACTGACACCA+TGG | - | chr2_3:63415563-63415582 | Msa0305580:intron | 40.0% | |
| GTTAGCATATTCCGAATCCA+TGG | + | chr2_3:63415583-63415602 | None:intergenic | 40.0% | |
| ATGACCGCAACAATCAAACT+AGG | + | chr2_3:63415625-63415644 | None:intergenic | 40.0% | |
| AGTTTGATTGTTGCGGTCAT+TGG | - | chr2_3:63415625-63415644 | Msa0305580:intron | 40.0% | |
| ACTACTCATAGCTGCACTAT+TGG | - | chr2_3:63415860-63415879 | Msa0305580:intron | 40.0% | |
| GGCTTCATCTGAGTTCAAAA+AGG | - | chr2_3:63415881-63415900 | Msa0305580:intron | 40.0% | |
| CAAAGGGAAGCTCAAATGAT+AGG | + | chr2_3:63416090-63416109 | None:intergenic | 40.0% | |
| ATTTGAGCTTCCCTTTGCTT+TGG | - | chr2_3:63416093-63416112 | Msa0305580:intron | 40.0% | |
| CACTAGTAGCAAAACCAAGA+TGG | - | chr2_3:63416132-63416151 | Msa0305580:intron | 40.0% | |
| GTTAACATGTACACCCATCT+TGG | + | chr2_3:63416149-63416168 | None:intergenic | 40.0% | |
| GCTTCCAAAAAGGTCAGAAA+TGG | - | chr2_3:63416275-63416294 | Msa0305580:intron | 40.0% | |
| TCCGCCATTACTTGGATAAT+CGG | - | chr2_3:63416449-63416468 | Msa0305580:intron | 40.0% | |
| ACCGATTATCCAAGTAATGG+CGG | + | chr2_3:63416453-63416472 | None:intergenic | 40.0% | |
| TGACATAGAAATTGTGGCCA+AGG | - | chr2_3:63416538-63416557 | Msa0305580:CDS | 40.0% | |
| TTCAGGCATGGCAGTATATT+TGG | - | chr2_3:63416583-63416602 | Msa0305580:CDS | 40.0% | |
| !! | TAAAGAGGGTACACACCTTT+TGG | - | chr2_3:63416637-63416656 | Msa0305580:exon | 40.0% |
| !! | CAATAAGCGGAGCATTGGAA+AGG | + | chr2_3:63413040-63413059 | None:intergenic | 45.0% |
| GATCACAATAGCTGGTCGTT+GGG | + | chr2_3:63413169-63413188 | None:intergenic | 45.0% | |
| TGATCACAATAGCTGGTCGT+TGG | + | chr2_3:63413170-63413189 | None:intergenic | 45.0% | |
| AATTCCACTGTCCACTAACG+GGG | - | chr2_3:63413190-63413209 | Msa0305580:intron | 45.0% | |
| AAAGCTGTGGACTCAGTTTG+GGG | + | chr2_3:63413216-63413235 | None:intergenic | 45.0% | |
| CAAAGCTGTGGACTCAGTTT+GGG | + | chr2_3:63413217-63413236 | None:intergenic | 45.0% | |
| ACAAAGCTGTGGACTCAGTT+TGG | + | chr2_3:63413218-63413237 | None:intergenic | 45.0% | |
| ! | ACTGAGTCCACAGCTTTGTA+TGG | - | chr2_3:63413219-63413238 | Msa0305580:intron | 45.0% |
| ! | AGTCCACAGCTTTGTATGGA+CGG | - | chr2_3:63413223-63413242 | Msa0305580:intron | 45.0% |
| TTTCCGTCCATACAAAGCTG+TGG | + | chr2_3:63413229-63413248 | None:intergenic | 45.0% | |
| ACTTGCGACATTCCTTTGGA+GGG | + | chr2_3:63413253-63413272 | None:intergenic | 45.0% | |
| TACTTGCGACATTCCTTTGG+AGG | + | chr2_3:63413254-63413273 | None:intergenic | 45.0% | |
| ! | AGGGTAAATGAGTTGAGTCG+AGG | - | chr2_3:63413308-63413327 | Msa0305580:intron | 45.0% |
| ! | CTATTTTGCAGAGGACAAGC+TGG | - | chr2_3:63413543-63413562 | Msa0305580:intron | 45.0% |
| TTATTTGCATACATGGGGCC+TGG | - | chr2_3:63413572-63413591 | Msa0305580:intron | 45.0% | |
| GTTGAGACGGATCTACAATC+TGG | - | chr2_3:63413742-63413761 | Msa0305580:intron | 45.0% | |
| TGAGACGGATCTACAATCTG+GGG | - | chr2_3:63413744-63413763 | Msa0305580:intron | 45.0% | |
| ACCAGTAACCACTCCAAGAT+TGG | + | chr2_3:63413943-63413962 | None:intergenic | 45.0% | |
| !! | AATACCTTCTGGGATGTCAC+AGG | + | chr2_3:63414138-63414157 | None:intergenic | 45.0% |
| TGCTCTTCAACGTACCTGTT+TGG | - | chr2_3:63414399-63414418 | Msa0305580:CDS | 45.0% | |
| AGTAGCACACCAATCCAAAC+AGG | + | chr2_3:63414416-63414435 | None:intergenic | 45.0% | |
| GGTCTTGCAATTTCTCTCCT+TGG | - | chr2_3:63414725-63414744 | Msa0305580:CDS | 45.0% | |
| AAGTGCCTTTGCTCTTATGG+TGG | - | chr2_3:63415085-63415104 | Msa0305580:intron | 45.0% | |
| GAAAGCCACCATAAGAGCAA+AGG | + | chr2_3:63415093-63415112 | None:intergenic | 45.0% | |
| GGAATTGCTTTGCTTGCATC+AGG | - | chr2_3:63415375-63415394 | Msa0305580:intron | 45.0% | |
| ACGATAACAGGAACCTATGC+AGG | - | chr2_3:63415408-63415427 | Msa0305580:intron | 45.0% | |
| CGATAACAGGAACCTATGCA+GGG | - | chr2_3:63415409-63415428 | Msa0305580:intron | 45.0% | |
| TACGACTGACACCATGGATT+CGG | - | chr2_3:63415569-63415588 | Msa0305580:intron | 45.0% | |
| TTGATTGTTGCGGTCATTGG+TGG | - | chr2_3:63415628-63415647 | Msa0305580:intron | 45.0% | |
| AGGAGTGGTACCAAAGCAAA+GGG | + | chr2_3:63416106-63416125 | None:intergenic | 45.0% | |
| CTACTAGTGAACTTGAGGAG+TGG | + | chr2_3:63416121-63416140 | None:intergenic | 45.0% | |
| ! | AGGCCCATTTCTGACCTTTT+TGG | + | chr2_3:63416282-63416301 | None:intergenic | 45.0% |
| GACAGATAGTAGGTCAGACT+CGG | - | chr2_3:63416310-63416329 | Msa0305580:intron | 45.0% | |
| ACAGATAGTAGGTCAGACTC+GGG | - | chr2_3:63416311-63416330 | Msa0305580:intron | 45.0% | |
| TGCAGATATCCGCCATTACT+TGG | - | chr2_3:63416441-63416460 | Msa0305580:intron | 45.0% | |
| ! | ATTGTGGCCAAGGTGTTTCT+TGG | - | chr2_3:63416548-63416567 | Msa0305580:CDS | 45.0% |
| ! | TTGTGGCCAAGGTGTTTCTT+GGG | - | chr2_3:63416549-63416568 | Msa0305580:CDS | 45.0% |
| !! | CAAAAATAAAAAAAAAAATA+AGG | + | chr2_3:63413126-63413145 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTATTTTTGTT+TGG | - | chr2_3:63413128-63413147 | Msa0305580:CDS | 5.0% |
| GAATGAACAACATGCAGGGC+AGG | + | chr2_3:63412873-63412892 | None:intergenic | 50.0% | |
| AAAGAGAATATGGCTGCCCC+AGG | - | chr2_3:63412963-63412982 | Msa0305580:CDS | 50.0% | |
| GCCCCAGGTTGTTCTAATTC+TGG | - | chr2_3:63412978-63412997 | Msa0305580:CDS | 50.0% | |
| GGTGTCAATAAGCGGAGCAT+TGG | + | chr2_3:63413045-63413064 | None:intergenic | 50.0% | |
| ! | CTTGCGACATTCCTTTGGAG+GGG | + | chr2_3:63413252-63413271 | None:intergenic | 50.0% |
| GAAGGCTTGAGCTTGAGCAT+AGG | + | chr2_3:63413838-63413857 | None:intergenic | 50.0% | |
| CAATCGATGGCTGCCAATCT+TGG | - | chr2_3:63413927-63413946 | Msa0305580:intron | 50.0% | |
| GCCAATCTTGGAGTGGTTAC+TGG | - | chr2_3:63413939-63413958 | Msa0305580:CDS | 50.0% | |
| ! | CAGTTCTACATGCTGCTTGC+AGG | - | chr2_3:63414026-63414045 | Msa0305580:CDS | 50.0% |
| !! | TGGATTGGTGTGCTACTGAC+CGG | - | chr2_3:63414419-63414438 | Msa0305580:CDS | 50.0% |
| GAGCATCAATGTGCTGAGTC+CGG | + | chr2_3:63414441-63414460 | None:intergenic | 50.0% | |
| !! | GCACCACTCCCTTTTAGTTG+CGG | + | chr2_3:63414701-63414720 | None:intergenic | 50.0% |
| !! | CTAAAAGGGAGTGGTGCTAC+TGG | - | chr2_3:63414704-63414723 | Msa0305580:CDS | 50.0% |
| ACGGCATAACCATAGCACCA+AGG | + | chr2_3:63414745-63414764 | None:intergenic | 50.0% | |
| CCACAATCTCTTCCTGCACT+CGG | - | chr2_3:63414853-63414872 | Msa0305580:intron | 50.0% | |
| ! | AAAGTACCAATGCCGAGTGC+AGG | + | chr2_3:63414868-63414887 | None:intergenic | 50.0% |
| !! | ACTCGGCATTGGTACTTTCC+AGG | - | chr2_3:63414870-63414889 | Msa0305580:CDS | 50.0% |
| TTGATTCCGCGAACTGAACG+TGG | + | chr2_3:63414902-63414921 | None:intergenic | 50.0% | |
| ACGTTCAGTTCGCGGAATCA+AGG | - | chr2_3:63414901-63414920 | Msa0305580:CDS | 50.0% | |
| CATGACATACTGCCCTGCAT+AGG | + | chr2_3:63415424-63415443 | None:intergenic | 50.0% | |
| GAGGAGTGGTACCAAAGCAA+AGG | + | chr2_3:63416107-63416126 | None:intergenic | 50.0% | |
| GGCATGGCAGTATATTTGGC+CGG | - | chr2_3:63416587-63416606 | Msa0305580:CDS | 50.0% | |
| !! | CAGGTGCTGTTAGAGCCAAA+AGG | + | chr2_3:63416655-63416674 | None:intergenic | 50.0% |
| TCTGCTGGACTACTTCTCTG+AGG | + | chr2_3:63416758-63416777 | None:intergenic | 50.0% | |
| ATGGACGGAAACCCCTCCAA+AGG | - | chr2_3:63413238-63413257 | Msa0305580:intron | 55.0% | |
| GATGGCTGCCAATCTTGGAG+TGG | - | chr2_3:63413932-63413951 | Msa0305580:intron | 55.0% | |
| TGGGATGTCACAGGCCACTA+TGG | + | chr2_3:63414129-63414148 | None:intergenic | 55.0% | |
| !!! | GCGTGTTTTTGGGCTGAGCT+TGG | - | chr2_3:63414629-63414648 | Msa0305580:intron | 55.0% |
| GTGCCGCAACTAAAAGGGAG+TGG | - | chr2_3:63414695-63414714 | Msa0305580:intron | 55.0% | |
| GCAGGAAGAGATTGTGGCTG+AGG | + | chr2_3:63414850-63414869 | None:intergenic | 55.0% | |
| CCGAGTGCAGGAAGAGATTG+TGG | + | chr2_3:63414856-63414875 | None:intergenic | 55.0% | |
| TCTCTTCCTGCACTCGGCAT+TGG | - | chr2_3:63414859-63414878 | Msa0305580:CDS | 55.0% | |
| TGCAGGGCAGTATGTCATGC+AGG | - | chr2_3:63415425-63415444 | Msa0305580:intron | 55.0% | |
| TTAAGTAGAGGCCGTGCACG+TGG | - | chr2_3:63415905-63415924 | Msa0305580:intron | 55.0% | |
| ! | TCAGTTTGGGGCCCCGTTAG+TGG | + | chr2_3:63413204-63413223 | None:intergenic | 60.0% |
| GTGGCCTGTGACATCCCAGA+AGG | - | chr2_3:63414131-63414150 | Msa0305580:intron | 60.0% | |
| ! | CGGTCATTGGTGGCTCTGCT+GGG | - | chr2_3:63415638-63415657 | Msa0305580:intron | 60.0% |
| ! | GGTCATTGGTGGCTCTGCTG+GGG | - | chr2_3:63415639-63415658 | Msa0305580:intron | 60.0% |
| ! | GCGGTCATTGGTGGCTCTGC+TGG | - | chr2_3:63415637-63415656 | Msa0305580:intron | 65.0% |
| ! | ATTGGTGGCTCTGCTGGGGC+TGG | - | chr2_3:63415643-63415662 | Msa0305580:intron | 65.0% |
| ! | TTGGTGGCTCTGCTGGGGCT+GGG | - | chr2_3:63415644-63415663 | Msa0305580:intron | 65.0% |
| ! | GGGGCCCCGTTAGTGGACAG+TGG | + | chr2_3:63413197-63413216 | None:intergenic | 70.0% |
| ! | TGGTGGCTCTGCTGGGGCTG+GGG | - | chr2_3:63415645-63415664 | Msa0305580:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 63412599 | 63417021 | 63412599 | ID=Msa0305580;Name=Msa0305580 |
| chr2_3 | mRNA | 63412599 | 63417021 | 63412599 | ID=Msa0305580-mRNA-1;Parent=Msa0305580;Name=Msa0305580-mRNA-1;_AED=0.18;_eAED=0.18;_QI=115|1|1|1|0.92|0.85|14|234|545 |
| chr2_3 | exon | 63412599 | 63413174 | 63412599 | ID=Msa0305580-mRNA-1:exon:21203;Parent=Msa0305580-mRNA-1 |
| chr2_3 | exon | 63413443 | 63413538 | 63413443 | ID=Msa0305580-mRNA-1:exon:21202;Parent=Msa0305580-mRNA-1 |
| chr2_3 | exon | 63413933 | 63414064 | 63413933 | ID=Msa0305580-mRNA-1:exon:21201;Parent=Msa0305580-mRNA-1 |
| chr2_3 | exon | 63414174 | 63414278 | 63414174 | ID=Msa0305580-mRNA-1:exon:21200;Parent=Msa0305580-mRNA-1 |
| chr2_3 | exon | 63414388 | 63414561 | 63414388 | ID=Msa0305580-mRNA-1:exon:21199;Parent=Msa0305580-mRNA-1 |
| chr2_3 | exon | 63414698 | 63414767 | 63414698 | ID=Msa0305580-mRNA-1:exon:21198;Parent=Msa0305580-mRNA-1 |
| chr2_3 | exon | 63414858 | 63415039 | 63414858 | ID=Msa0305580-mRNA-1:exon:21197;Parent=Msa0305580-mRNA-1 |
| chr2_3 | exon | 63415139 | 63415248 | 63415139 | ID=Msa0305580-mRNA-1:exon:21196;Parent=Msa0305580-mRNA-1 |
| chr2_3 | exon | 63415468 | 63415572 | 63415468 | ID=Msa0305580-mRNA-1:exon:21195;Parent=Msa0305580-mRNA-1 |
| chr2_3 | exon | 63415660 | 63415738 | 63415660 | ID=Msa0305580-mRNA-1:exon:21194;Parent=Msa0305580-mRNA-1 |
| chr2_3 | exon | 63415837 | 63415877 | 63415837 | ID=Msa0305580-mRNA-1:exon:21193;Parent=Msa0305580-mRNA-1 |
| chr2_3 | exon | 63415988 | 63416066 | 63415988 | ID=Msa0305580-mRNA-1:exon:21192;Parent=Msa0305580-mRNA-1 |
| chr2_3 | exon | 63416526 | 63416657 | 63416526 | ID=Msa0305580-mRNA-1:exon:21191;Parent=Msa0305580-mRNA-1 |
| chr2_3 | exon | 63416916 | 63417021 | 63416916 | ID=Msa0305580-mRNA-1:exon:21190;Parent=Msa0305580-mRNA-1 |
| chr2_3 | five_prime_UTR | 63416916 | 63417021 | 63416916 | ID=Msa0305580-mRNA-1:five_prime_utr;Parent=Msa0305580-mRNA-1 |
| chr2_3 | five_prime_UTR | 63416649 | 63416657 | 63416649 | ID=Msa0305580-mRNA-1:five_prime_utr;Parent=Msa0305580-mRNA-1 |
| chr2_3 | CDS | 63416526 | 63416648 | 63416526 | ID=Msa0305580-mRNA-1:cds;Parent=Msa0305580-mRNA-1 |
| chr2_3 | CDS | 63415988 | 63416066 | 63415988 | ID=Msa0305580-mRNA-1:cds;Parent=Msa0305580-mRNA-1 |
| chr2_3 | CDS | 63415837 | 63415877 | 63415837 | ID=Msa0305580-mRNA-1:cds;Parent=Msa0305580-mRNA-1 |
| chr2_3 | CDS | 63415660 | 63415738 | 63415660 | ID=Msa0305580-mRNA-1:cds;Parent=Msa0305580-mRNA-1 |
| chr2_3 | CDS | 63415468 | 63415572 | 63415468 | ID=Msa0305580-mRNA-1:cds;Parent=Msa0305580-mRNA-1 |
| chr2_3 | CDS | 63415139 | 63415248 | 63415139 | ID=Msa0305580-mRNA-1:cds;Parent=Msa0305580-mRNA-1 |
| chr2_3 | CDS | 63414858 | 63415039 | 63414858 | ID=Msa0305580-mRNA-1:cds;Parent=Msa0305580-mRNA-1 |
| chr2_3 | CDS | 63414698 | 63414767 | 63414698 | ID=Msa0305580-mRNA-1:cds;Parent=Msa0305580-mRNA-1 |
| chr2_3 | CDS | 63414388 | 63414561 | 63414388 | ID=Msa0305580-mRNA-1:cds;Parent=Msa0305580-mRNA-1 |
| chr2_3 | CDS | 63414174 | 63414278 | 63414174 | ID=Msa0305580-mRNA-1:cds;Parent=Msa0305580-mRNA-1 |
| chr2_3 | CDS | 63413933 | 63414064 | 63413933 | ID=Msa0305580-mRNA-1:cds;Parent=Msa0305580-mRNA-1 |
| chr2_3 | CDS | 63413443 | 63413538 | 63413443 | ID=Msa0305580-mRNA-1:cds;Parent=Msa0305580-mRNA-1 |
| chr2_3 | CDS | 63412833 | 63413174 | 63412833 | ID=Msa0305580-mRNA-1:cds;Parent=Msa0305580-mRNA-1 |
| chr2_3 | three_prime_UTR | 63412599 | 63412832 | 63412599 | ID=Msa0305580-mRNA-1:three_prime_utr;Parent=Msa0305580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
