Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0397070 | XP_003598694.1 | 87.831 | 189 | 3 | 1 | 1 | 169 | 103 | 291 | 4.73e-114 | 335 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0397070 | sp|O62518|YHPK_CAEEL | 49.735 | 189 | 72 | 3 | 1 | 169 | 98 | 283 | 6.61e-61 | 193 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0397070 | G7IW56 | 87.831 | 189 | 3 | 1 | 1 | 169 | 103 | 291 | 2.26e-114 | 335 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0033950 | Msa0397070 | 0.803734 | 3.026084e-49 | -8.615850e-47 |
| Msa0034030 | Msa0397070 | 0.803607 | 3.216273e-49 | -8.615850e-47 |
| Msa0043660 | Msa0397070 | 0.817780 | 2.761191e-52 | -8.615850e-47 |
| Msa0047160 | Msa0397070 | 0.801799 | 7.591680e-49 | -8.615850e-47 |
| Msa0054440 | Msa0397070 | 0.820920 | 5.315195e-53 | -8.615850e-47 |
| Msa0054480 | Msa0397070 | 0.813526 | 2.447909e-51 | -8.615850e-47 |
| Msa0059110 | Msa0397070 | 0.802556 | 5.303932e-49 | -8.615850e-47 |
| Msa0063530 | Msa0397070 | 0.800023 | 1.750371e-48 | -8.615850e-47 |
| Msa0070700 | Msa0397070 | 0.802380 | 5.767395e-49 | -8.615850e-47 |
| Msa0115400 | Msa0397070 | 0.846186 | 2.543565e-59 | -8.615850e-47 |
| Msa0127020 | Msa0397070 | 0.825139 | 5.515295e-54 | -8.615850e-47 |
| Msa0137550 | Msa0397070 | 0.814151 | 1.782482e-51 | -8.615850e-47 |
| Msa0146770 | Msa0397070 | 0.818854 | 1.577057e-52 | -8.615850e-47 |
| Msa0168230 | Msa0397070 | 0.814338 | 1.620908e-51 | -8.615850e-47 |
| Msa0169280 | Msa0397070 | 0.822397 | 2.420989e-53 | -8.615850e-47 |
| Msa0179190 | Msa0397070 | 0.824436 | 8.082411e-54 | -8.615850e-47 |
| Msa0189300 | Msa0397070 | 0.834930 | 2.253513e-56 | -8.615850e-47 |
| Msa0228120 | Msa0397070 | 0.891898 | 2.607734e-74 | -8.615850e-47 |
| Msa0228170 | Msa0397070 | 0.893753 | 4.685618e-75 | -8.615850e-47 |
| Msa0231660 | Msa0397070 | 0.809741 | 1.628534e-50 | -8.615850e-47 |
| Msa0388700 | Msa0397070 | 0.816380 | 5.698885e-52 | -8.615850e-47 |
| Msa0397070 | Msa0397540 | 0.806093 | 9.723272e-50 | -8.615850e-47 |
| Msa0397070 | Msa0411430 | 0.814689 | 1.355491e-51 | -8.615850e-47 |
| Msa0397070 | Msa0422840 | 0.801897 | 7.247282e-49 | -8.615850e-47 |
| Msa0397070 | Msa0422920 | 0.804478 | 2.118684e-49 | -8.615850e-47 |
| Msa0397070 | Msa0481030 | 0.831355 | 1.750124e-55 | -8.615850e-47 |
| Msa0397070 | Msa0481280 | 0.816186 | 6.295102e-52 | -8.615850e-47 |
| Msa0397070 | Msa0482130 | 0.824092 | 9.733625e-54 | -8.615850e-47 |
| Msa0397070 | Msa0500470 | 0.816461 | 5.464873e-52 | -8.615850e-47 |
| Msa0397070 | Msa0529890 | 0.805628 | 1.217589e-49 | -8.615850e-47 |
| Msa0397070 | Msa0542090 | 0.837179 | 6.055482e-57 | -8.615850e-47 |
| Msa0397070 | Msa0542130 | 0.834265 | 3.311468e-56 | -8.615850e-47 |
| Msa0397070 | Msa0554290 | 0.822126 | 2.798019e-53 | -8.615850e-47 |
| Msa0397070 | Msa0555450 | 0.805229 | 1.476416e-49 | -8.615850e-47 |
| Msa0397070 | Msa0581280 | 0.814809 | 1.275433e-51 | -8.615850e-47 |
| Msa0397070 | Msa0605000 | 0.827219 | 1.765177e-54 | -8.615850e-47 |
| Msa0397070 | Msa0625720 | 0.804031 | 2.625264e-49 | -8.615850e-47 |
| Msa0397070 | Msa0648780 | 0.832642 | 8.414296e-56 | -8.615850e-47 |
| Msa0397070 | Msa0685140 | 0.831442 | 1.665777e-55 | -8.615850e-47 |
| Msa0397070 | Msa0689260 | 0.833211 | 6.076278e-56 | -8.615850e-47 |
| Msa0397070 | Msa0691290 | 0.802132 | 6.486638e-49 | -8.615850e-47 |
| Msa0397070 | Msa0705990 | 0.800475 | 1.416145e-48 | -8.615850e-47 |
| Msa0397070 | Msa0711780 | 0.821671 | 3.567453e-53 | -8.615850e-47 |
| Msa0397070 | Msa0715700 | 0.810055 | 1.394323e-50 | -8.615850e-47 |
| Msa0397070 | Msa0763330 | 0.822526 | 2.259726e-53 | -8.615850e-47 |
| Msa0397070 | Msa0772480 | 0.800325 | 1.519986e-48 | -8.615850e-47 |
| Msa0397070 | Msa0794670 | 0.820409 | 6.965543e-53 | -8.615850e-47 |
| Msa0397070 | Msa0802410 | 0.813089 | 3.053835e-51 | -8.615850e-47 |
| Msa0397070 | Msa0830540 | 0.832084 | 1.156698e-55 | -8.615850e-47 |
| Msa0397070 | Msa0945440 | 0.832418 | 9.563505e-56 | -8.615850e-47 |
| Msa0397070 | Msa0970530 | 0.809941 | 1.474964e-50 | -8.615850e-47 |
| Msa0397070 | Msa0989540 | 0.812542 | 4.022443e-51 | -8.615850e-47 |
| Msa0397070 | Msa1089320 | 0.804250 | 2.363565e-49 | -8.615850e-47 |
| Msa0397070 | Msa1144040 | 0.820327 | 7.274284e-53 | -8.615850e-47 |
| Msa0397070 | Msa1153060 | 0.801231 | 9.928099e-49 | -8.615850e-47 |
| Msa0397070 | Msa1160590 | 0.811924 | 5.489367e-51 | -8.615850e-47 |
| Msa0397070 | Msa1181250 | 0.843323 | 1.503934e-58 | -8.615850e-47 |
| Msa0397070 | Msa1181330 | 0.841990 | 3.397276e-58 | -8.615850e-47 |
| Msa0397070 | Msa1208880 | 0.805994 | 1.020348e-49 | -8.615850e-47 |
| Msa0397070 | Msa1209200 | 0.803660 | 3.135646e-49 | -8.615850e-47 |
| Msa0397070 | Msa1209260 | 0.803658 | 3.138148e-49 | -8.615850e-47 |
| Msa0397070 | Msa1209760 | 0.818814 | 1.610454e-52 | -8.615850e-47 |
| Msa0397070 | Msa1245930 | 0.824434 | 8.087928e-54 | -8.615850e-47 |
| Msa0397070 | Msa1259060 | 0.819960 | 8.825356e-53 | -8.615850e-47 |
| Msa0397070 | Msa1265630 | 0.803325 | 3.678941e-49 | -8.615850e-47 |
| Msa0397070 | Msa1332590 | 0.809999 | 1.433155e-50 | -8.615850e-47 |
| Msa0397070 | Msa1358250 | 0.832944 | 7.080803e-56 | -8.615850e-47 |
| Msa0397070 | Msa1364210 | 0.804039 | 2.615781e-49 | -8.615850e-47 |
| Msa0397070 | Msa1392780 | 0.837634 | 4.630532e-57 | -8.615850e-47 |
| Msa0397070 | Msa1394290 | 0.816421 | 5.578255e-52 | -8.615850e-47 |
| Msa0397070 | Msa1400220 | 0.800464 | 1.423457e-48 | -8.615850e-47 |
| Msa0397070 | Msa1400580 | 0.819689 | 1.017688e-52 | -8.615850e-47 |
| Msa0397070 | Msa1419870 | 0.822037 | 2.934727e-53 | -8.615850e-47 |
| Msa0397070 | Msa1457920 | 0.825880 | 3.682855e-54 | -8.615850e-47 |
| Msa0271530 | Msa0397070 | 0.805522 | 1.282065e-49 | -8.615850e-47 |
| Msa0279220 | Msa0397070 | 0.813519 | 2.457190e-51 | -8.615850e-47 |
| Msa0279240 | Msa0397070 | 0.820142 | 8.017048e-53 | -8.615850e-47 |
| Msa0309750 | Msa0397070 | 0.809025 | 2.320458e-50 | -8.615850e-47 |
| Msa0318980 | Msa0397070 | 0.801615 | 8.282545e-49 | -8.615850e-47 |
| Msa0325590 | Msa0397070 | 0.800138 | 1.658731e-48 | -8.615850e-47 |
| Msa0345350 | Msa0397070 | 0.811187 | 7.937322e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0397070 | MtrunA17_Chr3g0084381 | 87.831 | 189 | 3 | 1 | 1 | 169 | 103 | 291 | 4.35e-118 | 335 |
| Msa0397070 | MtrunA17_Chr8g0345651 | 30.047 | 213 | 102 | 3 | 1 | 169 | 145 | 354 | 9.77e-25 | 98.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0397070 | AT1G63780.1 | 65.263 | 190 | 45 | 1 | 1 | 169 | 103 | 292 | 1.72e-91 | 268 |
| Msa0397070 | AT4G01560.1 | 33.333 | 201 | 98 | 4 | 1 | 169 | 147 | 343 | 2.39e-27 | 105 |
Find 39 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGGTCCTACTGCATATTT+TGG | 0.152617 | 3_2:+16020579 | Msa0397070:CDS |
| TAGAAGAAAAGCTGAAATTT+TGG | 0.216351 | 3_2:+16024874 | Msa0397070:three_prime_UTR |
| TCCTTCAATTCTACAGATTT+AGG | 0.221306 | 3_2:-16024053 | None:intergenic |
| CATTCTAAAACATCTGTTTC+CGG | 0.297484 | 3_2:+16022257 | Msa0397070:CDS |
| ACGACACAAACAAGAGAAAA+TGG | 0.341632 | 3_2:+16024924 | Msa0397070:three_prime_UTR |
| CGATTCATTCTTTCAGCATT+GGG | 0.364675 | 3_2:-16019459 | None:intergenic |
| AATAATATGCGGATAAGCTT+CGG | 0.371784 | 3_2:-16020732 | None:intergenic |
| GAGGAACTTTCTGTGATTGA+TGG | 0.376034 | 3_2:+16024800 | Msa0397070:exon |
| TCTGTAGAATTGAAGGAAAT+TGG | 0.387754 | 3_2:+16024059 | Msa0397070:CDS |
| ATAGTTTGTCATCTACCATA+TGG | 0.392644 | 3_2:+16020561 | Msa0397070:CDS |
| TGACTATACAGATGTTATCT+TGG | 0.414988 | 3_2:+16020506 | Msa0397070:CDS |
| ATAATATGCGGATAAGCTTC+GGG | 0.448452 | 3_2:-16020731 | None:intergenic |
| TCCTAAATCTGTAGAATTGA+AGG | 0.458118 | 3_2:+16024052 | Msa0397070:CDS |
| ACGATTCATTCTTTCAGCAT+TGG | 0.464351 | 3_2:-16019460 | None:intergenic |
| TGACAAACTATTAAACCATC+TGG | 0.466080 | 3_2:-16020549 | None:intergenic |
| GCTGTTCCTTGCAGGTTACA+AGG | 0.469779 | 3_2:+16020672 | Msa0397070:intron |
| AAATATGCAGTAGGACCATA+TGG | 0.471997 | 3_2:-16020576 | None:intergenic |
| TTCCGTGTAGTGTTCATGTA+AGG | 0.489124 | 3_2:-16024777 | None:intergenic |
| AAGAATGAATCGTGGTGGTC+AGG | 0.523960 | 3_2:+16019470 | Msa0397070:CDS |
| AGCTTCGGGCATGGTTCCAA+CGG | 0.525645 | 3_2:-16020717 | None:intergenic |
| GCAGATAAAATTAGGAACAG+TGG | 0.540090 | 3_2:+16024719 | Msa0397070:intron |
| TCTATAAACAGTTAGGTGAA+AGG | 0.554062 | 3_2:+16022226 | Msa0397070:intron |
| ACATGAACACTACACGGAAG+AGG | 0.568800 | 3_2:+16024781 | Msa0397070:CDS |
| TGTTACTGTGCTGTTAGTGC+AGG | 0.580733 | 3_2:+16024841 | Msa0397070:three_prime_UTR |
| AGTAATCCAAAATATGCAGT+AGG | 0.590553 | 3_2:-16020585 | None:intergenic |
| TTGAGACACTAAACTCAGCA+AGG | 0.597537 | 3_2:+16025028 | Msa0397070:three_prime_UTR |
| GAACTTTCTGTGATTGATGG+AGG | 0.597778 | 3_2:+16024803 | Msa0397070:exon |
| ATTAGAGACAGAAAAGCCGT+TGG | 0.603528 | 3_2:+16020701 | Msa0397070:CDS |
| CATCTGTATAGTCATGTGAT+CGG | 0.609305 | 3_2:-16020497 | None:intergenic |
| ATGCGGATAAGCTTCGGGCA+TGG | 0.635152 | 3_2:-16020726 | None:intergenic |
| GAACACCGAGGTGTGCCAGA+TGG | 0.638084 | 3_2:+16020534 | Msa0397070:CDS |
| GACCTTACATGAACACTACA+CGG | 0.644746 | 3_2:+16024775 | Msa0397070:CDS |
| TGAGACACTAAACTCAGCAA+GGG | 0.685905 | 3_2:+16025029 | Msa0397070:three_prime_UTR |
| TTAAACCATCTGGCACACCT+CGG | 0.692377 | 3_2:-16020539 | None:intergenic |
| TATAGACGCAACTCAAAACG+TGG | 0.698081 | 3_2:-16024083 | None:intergenic |
| AAATTATCAAGAATAATATG+CGG | 0.698309 | 3_2:-16020743 | None:intergenic |
| GCTGAAAGAATGAATCGTGG+TGG | 0.764437 | 3_2:+16019465 | Msa0397070:CDS |
| AATGCTGAAAGAATGAATCG+TGG | 0.776928 | 3_2:+16019462 | Msa0397070:CDS |
| ATCTTGGTTCATGAACACCG+AGG | 0.787086 | 3_2:+16020522 | Msa0397070:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAATAAAAAATAAAATA+TGG | + | chr3_2:16022720-16022739 | Msa0397070:intron | 0.0% |
| !!! | TTATTTTATATTTTTTTTTT+GGG | - | chr3_2:16023685-16023704 | None:intergenic | 0.0% |
| !!! | TTTATTTTATATTTTTTTTT+TGG | - | chr3_2:16023686-16023705 | None:intergenic | 0.0% |
| !! | TTAAAAACATTAATAAATCA+GGG | - | chr3_2:16020138-16020157 | None:intergenic | 10.0% |
| !! | ATTAAAAACATTAATAAATC+AGG | - | chr3_2:16020139-16020158 | None:intergenic | 10.0% |
| !!! | AATATCATCATTATTTTTTT+CGG | - | chr3_2:16020437-16020456 | None:intergenic | 10.0% |
| !! | AGCATATAATTAAAAAAATA+TGG | - | chr3_2:16021638-16021657 | None:intergenic | 10.0% |
| !!! | TAAAAAAAAAAATTTTACAG+GGG | - | chr3_2:16022380-16022399 | None:intergenic | 10.0% |
| !!! | CTAAAAAAAAAAATTTTACA+GGG | - | chr3_2:16022381-16022400 | None:intergenic | 10.0% |
| !!! | TCTAAAAAAAAAAATTTTAC+AGG | - | chr3_2:16022382-16022401 | None:intergenic | 10.0% |
| !!! | AAAACAAAAAAATTTTATGA+GGG | - | chr3_2:16023803-16023822 | None:intergenic | 10.0% |
| !!! | CTGAAATTTTTTAAAAAAAT+TGG | + | chr3_2:16022658-16022677 | Msa0397070:intron | 10.0% |
| !! | TATAAAAAATGAAAAAATTC+TGG | + | chr3_2:16022749-16022768 | Msa0397070:intron | 10.0% |
| !!! | AAGAAATTCATATTTTTTTT+CGG | + | chr3_2:16022834-16022853 | Msa0397070:intron | 10.0% |
| !!! | AAAATTCATATTTTTTTTTC+CGG | + | chr3_2:16022890-16022909 | Msa0397070:intron | 10.0% |
| !!! | AATTTCATTAGTATTTTTTT+CGG | - | chr3_2:16022960-16022979 | None:intergenic | 10.0% |
| !!! | TTATTTCCAAATTTTTTTTT+GGG | - | chr3_2:16023069-16023088 | None:intergenic | 10.0% |
| !!! | TTTATTTCCAAATTTTTTTT+TGG | - | chr3_2:16023070-16023089 | None:intergenic | 10.0% |
| !!! | AAAACAAAAAAATTTTATGA+GGG | + | chr3_2:16023803-16023822 | Msa0397070:intron | 10.0% |
| !!! | ATCTAAAAAAAAATTTTTAC+AGG | + | chr3_2:16023830-16023849 | Msa0397070:intron | 10.0% |
| !!! | TCTAAAAAAAAATTTTTACA+GGG | + | chr3_2:16023831-16023850 | Msa0397070:intron | 10.0% |
| !! | ATAAAATTAATAACAACAAA+GGG | - | chr3_2:16024143-16024162 | None:intergenic | 10.0% |
| !!! | ATAATACTTTTTTTTTTTGA+AGG | - | chr3_2:16025156-16025175 | None:intergenic | 10.0% |
| !! | AATATGGAAAATTGATTATT+TGG | + | chr3_2:16019544-16019563 | Msa0397070:intron | 15.0% |
| !! | ATATTAGTATATTAACTTCA+CGG | - | chr3_2:16019729-16019748 | None:intergenic | 15.0% |
| !! | TTAATATTAGATAATATGCT+TGG | + | chr3_2:16019759-16019778 | Msa0397070:intron | 15.0% |
| !! | TAATATTAGATAATATGCTT+GGG | + | chr3_2:16019760-16019779 | Msa0397070:intron | 15.0% |
| !!! | AAATAATTTATTTGCTATTG+TGG | + | chr3_2:16020213-16020232 | Msa0397070:intron | 15.0% |
| !! | AAATTATCAAGAATAATATG+CGG | - | chr3_2:16020746-16020765 | None:intergenic | 15.0% |
| !! | AGTATTATAATTGATATAGA+TGG | - | chr3_2:16021933-16021952 | None:intergenic | 15.0% |
| !!! | CAAAACAAAAAAATTTTATG+AGG | - | chr3_2:16023802-16023821 | None:intergenic | 15.0% |
| !!! | CTCATAAAATTTTTTTGTTT+TGG | + | chr3_2:16022409-16022428 | Msa0397070:intron | 15.0% |
| !!! | AAATTTTTTTGTTTTGGTTT+TGG | + | chr3_2:16022415-16022434 | Msa0397070:intron | 15.0% |
| !! | TAAAAATGAAAACAAAAATC+TGG | + | chr3_2:16022690-16022709 | Msa0397070:intron | 15.0% |
| !!! | ATTTCATTAGTATTTTTTTC+GGG | - | chr3_2:16022959-16022978 | None:intergenic | 15.0% |
| !! | AAAATTCCCAAAAAAAAATT+TGG | + | chr3_2:16023060-16023079 | Msa0397070:intron | 15.0% |
| !!! | CGAAATTTTATTTAAAATTC+TGG | - | chr3_2:16023289-16023308 | None:intergenic | 15.0% |
| !! | TCTGAAAAAAATTAAAATTC+TGG | - | chr3_2:16023360-16023379 | None:intergenic | 15.0% |
| !! | CTGAAAATATTAAAAAATTC+TGG | - | chr3_2:16023575-16023594 | None:intergenic | 15.0% |
| !!! | AAATTTTTTTGTTTTGGTTT+TGG | - | chr3_2:16022415-16022434 | None:intergenic | 15.0% |
| !!! | CTCATAAAATTTTTTTGTTT+TGG | - | chr3_2:16022409-16022428 | None:intergenic | 15.0% |
| !!! | CAAAACAAAAAAATTTTATG+AGG | + | chr3_2:16023802-16023821 | Msa0397070:intron | 15.0% |
| !!! | CTAAAAAAAAATTTTTACAG+GGG | + | chr3_2:16023832-16023851 | Msa0397070:intron | 15.0% |
| !! | ATAAAACAGGATAAATAAAA+GGG | - | chr3_2:16023905-16023924 | None:intergenic | 15.0% |
| !! | TAAAATTAATAACAACAAAG+GGG | - | chr3_2:16024142-16024161 | None:intergenic | 15.0% |
| !! | CATAAAATTAATAACAACAA+AGG | - | chr3_2:16024144-16024163 | None:intergenic | 15.0% |
| !!! | CTTTGTTGTTATTAATTTTA+TGG | + | chr3_2:16024142-16024161 | Msa0397070:intron | 15.0% |
| !!! | ATTTGGATTTTCAATTCTTT+TGG | - | chr3_2:16019625-16019644 | None:intergenic | 20.0% |
| !! | TATTAGTATATTAACTTCAC+GGG | - | chr3_2:16019728-16019747 | None:intergenic | 20.0% |
| !! | AATATTAGATAATATGCTTG+GGG | + | chr3_2:16019761-16019780 | Msa0397070:intron | 20.0% |
| !! | AAATGTAATGTGTAAAATGT+TGG | - | chr3_2:16019868-16019887 | None:intergenic | 20.0% |
| !!! | TTATGTAGAAAGTACAATAA+TGG | - | chr3_2:16019916-16019935 | None:intergenic | 20.0% |
| !! | ACAAAAACTATATAGAGATA+TGG | - | chr3_2:16019954-16019973 | None:intergenic | 20.0% |
| !!! | TTAATTTTCACACTGTTATT+TGG | + | chr3_2:16020154-16020173 | Msa0397070:intron | 20.0% |
| !!! | GTGTTAACTATATAGATTTT+AGG | + | chr3_2:16020632-16020651 | Msa0397070:intron | 20.0% |
| !!! | TCTTGATAATTTTGAAACTA+AGG | + | chr3_2:16020754-16020773 | Msa0397070:CDS | 20.0% |
| !!! | TTTGTACATACTAATTTTAC+TGG | + | chr3_2:16020807-16020826 | Msa0397070:intron | 20.0% |
| !! | ATGAAAATATAGAATGATTG+TGG | + | chr3_2:16020911-16020930 | Msa0397070:intron | 20.0% |
| !! | TAAGTAAAATTAAACGATGT+AGG | + | chr3_2:16020977-16020996 | Msa0397070:intron | 20.0% |
| !! | AACATTAGAAATACTTCATT+TGG | + | chr3_2:16021031-16021050 | Msa0397070:intron | 20.0% |
| !! | CTTAATCTTATTATGTAAGT+CGG | - | chr3_2:16021276-16021295 | None:intergenic | 20.0% |
| !! | TAATCAACTCTTATTATTAG+GGG | - | chr3_2:16021396-16021415 | None:intergenic | 20.0% |
| !! | CTAATCAACTCTTATTATTA+GGG | - | chr3_2:16021397-16021416 | None:intergenic | 20.0% |
| !! | TCTAATCAACTCTTATTATT+AGG | - | chr3_2:16021398-16021417 | None:intergenic | 20.0% |
| !! | TATATTGAGGTTATATTCAA+TGG | - | chr3_2:16021476-16021495 | None:intergenic | 20.0% |
| !! | ATGGTTAATATTAATAACAC+AGG | - | chr3_2:16021619-16021638 | None:intergenic | 20.0% |
| !!! | TTCATTTGAATCTATTTTGA+AGG | + | chr3_2:16022129-16022148 | Msa0397070:intron | 20.0% |
| !!! | TTCCAAATTTTTTACAATAC+CGG | + | chr3_2:16022803-16022822 | Msa0397070:intron | 20.0% |
| !!! | ATGAATTTCTTTCATTTTTC+CGG | - | chr3_2:16022825-16022844 | None:intergenic | 20.0% |
| !!! | TGAATTTTTTTTCCGTTATA+CGG | - | chr3_2:16022878-16022897 | None:intergenic | 20.0% |
| !! | TATTTATAAACCGAGAATAA+GGG | - | chr3_2:16023036-16023055 | None:intergenic | 20.0% |
| !! | TAAAAATTGTGAAAAACTTC+TGG | - | chr3_2:16023236-16023255 | None:intergenic | 20.0% |
| !! | CATAAAACAGGATAAATAAA+AGG | - | chr3_2:16023906-16023925 | None:intergenic | 20.0% |
| !!! | TGTTGTTATTAATTTTATGG+AGG | + | chr3_2:16024145-16024164 | Msa0397070:intron | 20.0% |
| !!! | ACCAATAATTCAATATTTTC+TGG | + | chr3_2:16024266-16024285 | Msa0397070:intron | 20.0% |
| !! | ACCAGAAAATATTGAATTAT+TGG | - | chr3_2:16024270-16024289 | None:intergenic | 20.0% |
| !! | GCAAGAAAATATTGAATTAT+TGG | - | chr3_2:16024326-16024345 | None:intergenic | 20.0% |
| !! | TTCAAGAGAATATCTATTAT+TGG | - | chr3_2:16024365-16024384 | None:intergenic | 20.0% |
| ! | GCACATATAGAAAATGATAA+CGG | - | chr3_2:16019520-16019539 | None:intergenic | 25.0% |
| ! | TTCTATATGTGCTTGTAATA+TGG | + | chr3_2:16019528-16019547 | Msa0397070:intron | 25.0% |
| ! | CAATGCAAAAATATCTTCAA+GGG | - | chr3_2:16020056-16020075 | None:intergenic | 25.0% |
| ! | GCATGTTATATCATATATAC+TGG | + | chr3_2:16020075-16020094 | Msa0397070:intron | 25.0% |
| !!! | ATTATTTTGACACATACATG+AGG | - | chr3_2:16020200-16020219 | None:intergenic | 25.0% |
| ! | TTAAGGTATGTATCTTATCA+TGG | - | chr3_2:16020342-16020361 | None:intergenic | 25.0% |
| !! | AACTATTACTGATTAGTTAG+AGG | - | chr3_2:16020391-16020410 | None:intergenic | 25.0% |
| ! | TGAAATAACCTGAAATGAAA+GGG | - | chr3_2:16020460-16020479 | None:intergenic | 25.0% |
| !!! | ATATTTTGGATTACTCAATG+TGG | + | chr3_2:16020593-16020612 | Msa0397070:CDS | 25.0% |
| !!! | TGTTTTGAATACTGCAAAAA+AGG | - | chr3_2:16020944-16020963 | None:intergenic | 25.0% |
| ! | TCAGTACTTCAATCATAATT+TGG | - | chr3_2:16021193-16021212 | None:intergenic | 25.0% |
| !!! | AATTTACAGAAGCACTTATA+AGG | - | chr3_2:16021887-16021906 | None:intergenic | 25.0% |
| !! | CTTTTTGTCTATAAACAGTT+AGG | + | chr3_2:16022219-16022238 | Msa0397070:intron | 25.0% |
| !!! | AAACAGATGTTTTAGAATGT+TGG | - | chr3_2:16022256-16022275 | None:intergenic | 25.0% |
| !!! | GTTCAGGTTAGTTTTATTTA+GGG | + | chr3_2:16022338-16022357 | Msa0397070:intron | 25.0% |
| !! | ACAAAAAAATTTTATGAGGG+TGG | - | chr3_2:16023806-16023825 | None:intergenic | 25.0% |
| ! | TTCCGGTATTGTAAAAAATT+TGG | - | chr3_2:16022808-16022827 | None:intergenic | 25.0% |
| ! | GTATTTATAAACCGAGAATA+AGG | - | chr3_2:16023037-16023056 | None:intergenic | 25.0% |
| !! | ACAAAAAAATTTTATGAGGG+TGG | + | chr3_2:16023806-16023825 | Msa0397070:intron | 25.0% |
| !! | TTAATTTTATGGAGGAATGA+AGG | + | chr3_2:16024153-16024172 | Msa0397070:intron | 25.0% |
| !! | TTCAACTTTAGGAATAAGAT+TGG | - | chr3_2:16024678-16024697 | None:intergenic | 25.0% |
| !!! | AGTTTTTGGTATTCAACTTT+AGG | - | chr3_2:16024689-16024708 | None:intergenic | 25.0% |
| !! | AACCTTTTGCAGATAAAATT+AGG | + | chr3_2:16024711-16024730 | Msa0397070:intron | 25.0% |
| !! | TTCCTAATTTTATCTGCAAA+AGG | - | chr3_2:16024716-16024735 | None:intergenic | 25.0% |
| !! | TAGAAGAAAAGCTGAAATTT+TGG | + | chr3_2:16024874-16024893 | Msa0397070:three_prime_UTR | 25.0% |
| !! | AATGATAACGGAGGATAAAA+TGG | - | chr3_2:16019508-16019527 | None:intergenic | 30.0% |
| !! | CATATAGAAAATGATAACGG+AGG | - | chr3_2:16019517-16019536 | None:intergenic | 30.0% |
| ACGCAACAGTAGAAAATATT+TGG | - | chr3_2:16019642-16019661 | None:intergenic | 30.0% | |
| TGTTGCGTTAGCAAAAATAT+GGG | + | chr3_2:16019654-16019673 | Msa0397070:intron | 30.0% | |
| ! | AGTACAATAATGGAACATAG+TGG | - | chr3_2:16019906-16019925 | None:intergenic | 30.0% |
| GCAATGCAAAAATATCTTCA+AGG | - | chr3_2:16020057-16020076 | None:intergenic | 30.0% | |
| ! | TGGCTTATTTAGAGTTTCTA+TGG | + | chr3_2:16020095-16020114 | Msa0397070:intron | 30.0% |
| GGTTAAACCAAAAACAATGT+TGG | - | chr3_2:16020321-16020340 | None:intergenic | 30.0% | |
| ATGATATTCCCTTTCATTTC+AGG | + | chr3_2:16020449-16020468 | Msa0397070:intron | 30.0% | |
| CTGAAATAACCTGAAATGAA+AGG | - | chr3_2:16020461-16020480 | None:intergenic | 30.0% | |
| TGACTATACAGATGTTATCT+TGG | + | chr3_2:16020506-16020525 | Msa0397070:CDS | 30.0% | |
| TGACAAACTATTAAACCATC+TGG | - | chr3_2:16020552-16020571 | None:intergenic | 30.0% | |
| ! | ATAGTTTGTCATCTACCATA+TGG | + | chr3_2:16020561-16020580 | Msa0397070:CDS | 30.0% |
| AGTAATCCAAAATATGCAGT+AGG | - | chr3_2:16020588-16020607 | None:intergenic | 30.0% | |
| !!! | ATGTGGTAAGTGTTAGTTTT+AGG | + | chr3_2:16020610-16020629 | Msa0397070:intron | 30.0% |
| AATAATATGCGGATAAGCTT+CGG | - | chr3_2:16020735-16020754 | None:intergenic | 30.0% | |
| ! | CATACTAATTTTACTGGCAA+TGG | + | chr3_2:16020813-16020832 | Msa0397070:intron | 30.0% |
| !!! | AATGTTTTAGCCAAATGCTA+TGG | - | chr3_2:16021017-16021036 | None:intergenic | 30.0% |
| GAAATACTTCATTTGGAGAA+TGG | + | chr3_2:16021038-16021057 | Msa0397070:intron | 30.0% | |
| TTCAATCATAATTTGGACCA+GGG | - | chr3_2:16021186-16021205 | None:intergenic | 30.0% | |
| TAAGCTCAGTAGAATGATTA+AGG | + | chr3_2:16021424-16021443 | Msa0397070:intron | 30.0% | |
| AATTATATGCTGTGTACTCA+TGG | + | chr3_2:16021647-16021666 | Msa0397070:intron | 30.0% | |
| ATTATATGCTGTGTACTCAT+GGG | + | chr3_2:16021648-16021667 | Msa0397070:intron | 30.0% | |
| TATAATTGATATCCGACCTT+AGG | + | chr3_2:16021691-16021710 | Msa0397070:intron | 30.0% | |
| ! | ATCTTTTCCAAATTGACCTA+AGG | - | chr3_2:16021710-16021729 | None:intergenic | 30.0% |
| AGGTCAATTTGGAAAAGATT+AGG | + | chr3_2:16021711-16021730 | Msa0397070:intron | 30.0% | |
| TTTCAATGTGAACATATGCT+TGG | - | chr3_2:16021782-16021801 | None:intergenic | 30.0% | |
| AAGGTAGTTGGGAAATAAAA+AGG | - | chr3_2:16021868-16021887 | None:intergenic | 30.0% | |
| AATTGATATAGATGGCGATT+AGG | - | chr3_2:16021925-16021944 | None:intergenic | 30.0% | |
| ! | CAGAAAGGTAATTATTTTCG+CGG | - | chr3_2:16022024-16022043 | None:intergenic | 30.0% |
| ACTGTAAACAGTTATGTGAA+AGG | + | chr3_2:16022100-16022119 | Msa0397070:intron | 30.0% | |
| ! | AGTGTTACTATTGTTATGGA+TGG | - | chr3_2:16022164-16022183 | None:intergenic | 30.0% |
| ! | AAGCAGTGTTACTATTGTTA+TGG | - | chr3_2:16022168-16022187 | None:intergenic | 30.0% |
| TCTATAAACAGTTAGGTGAA+AGG | + | chr3_2:16022226-16022245 | Msa0397070:intron | 30.0% | |
| !! | CATTCTAAAACATCTGTTTC+CGG | + | chr3_2:16022257-16022276 | Msa0397070:CDS | 30.0% |
| !!! | CGTTCAGGTTAGTTTTATTT+AGG | + | chr3_2:16022337-16022356 | Msa0397070:intron | 30.0% |
| GTTAAATGACAAGTACTTTC+CGG | - | chr3_2:16022912-16022931 | None:intergenic | 30.0% | |
| ATACACAAAAAACCTAAGCT+CGG | + | chr3_2:16022988-16023007 | Msa0397070:intron | 30.0% | |
| TGTATTTATAAACCGAGCTT+AGG | - | chr3_2:16023003-16023022 | None:intergenic | 30.0% | |
| ! | CATATCTTTTCCCTTATTCT+CGG | + | chr3_2:16023023-16023042 | Msa0397070:intron | 30.0% |
| TTAGTATATATGTCGAGCTT+AGG | - | chr3_2:16023106-16023125 | None:intergenic | 30.0% | |
| GAAAGTCAAATGCATAAAAC+AGG | - | chr3_2:16023918-16023937 | None:intergenic | 30.0% | |
| CTGTTAACTTTCTCTTGTTA+CGG | + | chr3_2:16023960-16023979 | Msa0397070:intron | 30.0% | |
| GCATCATATATATGAAAAGC+AGG | + | chr3_2:16024025-16024044 | Msa0397070:intron | 30.0% | |
| TCATATATATGAAAAGCAGG+CGG | + | chr3_2:16024028-16024047 | Msa0397070:intron | 30.0% | |
| TCCTAAATCTGTAGAATTGA+AGG | + | chr3_2:16024052-16024071 | Msa0397070:CDS | 30.0% | |
| TCCTTCAATTCTACAGATTT+AGG | - | chr3_2:16024056-16024075 | None:intergenic | 30.0% | |
| TCTGTAGAATTGAAGGAAAT+TGG | + | chr3_2:16024059-16024078 | Msa0397070:CDS | 30.0% | |
| TATAGCATATACGCAGTTTA+TGG | + | chr3_2:16024478-16024497 | Msa0397070:intron | 30.0% | |
| !!! | AAATTTTTTGAAATCGACGC+AGG | + | chr3_2:16024617-16024636 | Msa0397070:intron | 30.0% |
| !! | GAAAAGCTGAAATTTTGGAA+TGG | + | chr3_2:16024879-16024898 | Msa0397070:three_prime_UTR | 30.0% |
| CGATTCATTCTTTCAGCATT+GGG | - | chr3_2:16019462-16019481 | None:intergenic | 35.0% | |
| ACGATTCATTCTTTCAGCAT+TGG | - | chr3_2:16019463-16019482 | None:intergenic | 35.0% | |
| AATGCTGAAAGAATGAATCG+TGG | + | chr3_2:16019462-16019481 | Msa0397070:CDS | 35.0% | |
| AACGGAGGATAAAATGGTAA+AGG | - | chr3_2:16019502-16019521 | None:intergenic | 35.0% | |
| CTGTTGCGTTAGCAAAAATA+TGG | + | chr3_2:16019653-16019672 | Msa0397070:intron | 35.0% | |
| CATAACATCCTCTTTGAATC+AGG | + | chr3_2:16019702-16019721 | Msa0397070:intron | 35.0% | |
| ! | ATAATGGAACATAGTGGTCT+GGG | - | chr3_2:16019900-16019919 | None:intergenic | 35.0% |
| ! | AATAATGGAACATAGTGGTC+TGG | - | chr3_2:16019901-16019920 | None:intergenic | 35.0% |
| ! | GAGATATGGTTTTCTTGCTA+TGG | - | chr3_2:16019940-16019959 | None:intergenic | 35.0% |
| ATGACTCTGTTTATTCGATC+TGG | + | chr3_2:16020273-16020292 | Msa0397070:intron | 35.0% | |
| AACCAAAAACAATGTTGGAC+AGG | - | chr3_2:16020316-16020335 | None:intergenic | 35.0% | |
| CATCTGTATAGTCATGTGAT+CGG | - | chr3_2:16020500-16020519 | None:intergenic | 35.0% | |
| AAATATGCAGTAGGACCATA+TGG | - | chr3_2:16020579-16020598 | None:intergenic | 35.0% | |
| ! | TATGGTCCTACTGCATATTT+TGG | + | chr3_2:16020579-16020598 | Msa0397070:CDS | 35.0% |
| ATAATATGCGGATAAGCTTC+GGG | - | chr3_2:16020734-16020753 | None:intergenic | 35.0% | |
| TCAGAAGGTCGGATAAATAA+CGG | - | chr3_2:16020853-16020872 | None:intergenic | 35.0% | |
| TCGGAAAATTATCAGAAGGT+CGG | - | chr3_2:16020864-16020883 | None:intergenic | 35.0% | |
| TGAGTCGGAAAATTATCAGA+AGG | - | chr3_2:16020868-16020887 | None:intergenic | 35.0% | |
| !! | ATTTGGAGAATGGTTTTACG+AGG | + | chr3_2:16021048-16021067 | Msa0397070:intron | 35.0% |
| AAGAAACAGATCAATCATGC+AGG | - | chr3_2:16021083-16021102 | None:intergenic | 35.0% | |
| ! | ATTGATCTGTTTCTTGCAAG+CGG | + | chr3_2:16021088-16021107 | Msa0397070:intron | 35.0% |
| ACAAGTCTAGCAATCAATCA+TGG | + | chr3_2:16021144-16021163 | Msa0397070:intron | 35.0% | |
| CTTCAATCATAATTTGGACC+AGG | - | chr3_2:16021187-16021206 | None:intergenic | 35.0% | |
| CACTTAAATTATGCTCTTGC+AGG | - | chr3_2:16021228-16021247 | None:intergenic | 35.0% | |
| !!! | GTGTTGCACATAGTGTTTTT+TGG | + | chr3_2:16021245-16021264 | Msa0397070:intron | 35.0% |
| AAGAGAACAAATCAGAATGC+AGG | + | chr3_2:16021293-16021312 | Msa0397070:intron | 35.0% | |
| AGCATCTAATGAGGAAAAGA+TGG | + | chr3_2:16021319-16021338 | Msa0397070:intron | 35.0% | |
| TTATTATTAGGGGCTTCTAG+GGG | - | chr3_2:16021386-16021405 | None:intergenic | 35.0% | |
| CTTATTATTAGGGGCTTCTA+GGG | - | chr3_2:16021387-16021406 | None:intergenic | 35.0% | |
| TCTTATTATTAGGGGCTTCT+AGG | - | chr3_2:16021388-16021407 | None:intergenic | 35.0% | |
| TCGAGACGTGATTTATATTG+AGG | - | chr3_2:16021489-16021508 | None:intergenic | 35.0% | |
| TTATATGCTGTGTACTCATG+GGG | + | chr3_2:16021649-16021668 | Msa0397070:intron | 35.0% | |
| TTTCCAAATTGACCTAAGGT+CGG | - | chr3_2:16021706-16021725 | None:intergenic | 35.0% | |
| ! | GAAGCACTTATAAGGTAGTT+GGG | - | chr3_2:16021879-16021898 | None:intergenic | 35.0% |
| !! | AGAAGCACTTATAAGGTAGT+TGG | - | chr3_2:16021880-16021899 | None:intergenic | 35.0% |
| !! | ATACTGCTTTTGTGCCAATT+TGG | + | chr3_2:16021948-16021967 | Msa0397070:intron | 35.0% |
| AAGCTGTTTACAGTCCAAAT+TGG | - | chr3_2:16021965-16021984 | None:intergenic | 35.0% | |
| AATTTGGACTGTAAACAGCT+TGG | + | chr3_2:16021964-16021983 | Msa0397070:intron | 35.0% | |
| ! | GTGTCACTAGTATTACAGAA+AGG | - | chr3_2:16022039-16022058 | None:intergenic | 35.0% |
| !! | ATACGTTTTGTGTCTGGTTT+TGG | - | chr3_2:16022285-16022304 | None:intergenic | 35.0% |
| ATAGATTCTACTGAGTCACA+GGG | - | chr3_2:16022449-16022468 | None:intergenic | 35.0% | |
| AAAAAATCAGAAATGCCACG+TGG | - | chr3_2:16022540-16022559 | None:intergenic | 35.0% | |
| CTTGTCATTCAACCGTATAA+CGG | + | chr3_2:16022863-16022882 | Msa0397070:intron | 35.0% | |
| ! | CTTGTCATTTAACCTAAGCT+CGG | + | chr3_2:16022919-16022938 | Msa0397070:intron | 35.0% |
| ! | TTTTTGTGTATTCCGAGCTT+AGG | - | chr3_2:16022934-16022953 | None:intergenic | 35.0% |
| !!! | TTTTTTTTTTGGGGTACACG+TGG | - | chr3_2:16023675-16023694 | None:intergenic | 35.0% |
| !!! | CTGTAATATAGGCCACTTTT+GGG | - | chr3_2:16023863-16023882 | None:intergenic | 35.0% |
| CAAAAGTGGCCTATATTACA+GGG | + | chr3_2:16023862-16023881 | Msa0397070:intron | 35.0% | |
| AAAAGTGGCCTATATTACAG+GGG | + | chr3_2:16023863-16023882 | Msa0397070:intron | 35.0% | |
| !!! | GTTTTTAGCCCCTGTAATAT+AGG | - | chr3_2:16023874-16023893 | None:intergenic | 35.0% |
| ATATTGTATCTGCTGCATAC+AGG | + | chr3_2:16024003-16024022 | Msa0397070:intron | 35.0% | |
| CATATATATGAAAAGCAGGC+GGG | + | chr3_2:16024029-16024048 | Msa0397070:intron | 35.0% | |
| !!! | TTTTGAGTTGCGTCTATATC+AGG | + | chr3_2:16024088-16024107 | Msa0397070:CDS | 35.0% |
| TGAATATATTGTGCTGCAAC+TGG | + | chr3_2:16024219-16024238 | Msa0397070:intron | 35.0% | |
| GAATATATTGTGCTGCAACT+GGG | + | chr3_2:16024220-16024239 | Msa0397070:intron | 35.0% | |
| TATTTCTTGCGTCTCTAACT+TGG | + | chr3_2:16024391-16024410 | Msa0397070:intron | 35.0% | |
| ! | CTGCAAAAGGTTTCAGTTTT+TGG | - | chr3_2:16024703-16024722 | None:intergenic | 35.0% |
| GCAGATAAAATTAGGAACAG+TGG | + | chr3_2:16024719-16024738 | Msa0397070:intron | 35.0% | |
| ACGACACAAACAAGAGAAAA+TGG | + | chr3_2:16024924-16024943 | Msa0397070:three_prime_UTR | 35.0% | |
| CTTCTTTGACAAGTAGCAAG+AGG | - | chr3_2:16019813-16019832 | None:intergenic | 40.0% | |
| TTGACACATACATGAGGAAC+AGG | - | chr3_2:16020194-16020213 | None:intergenic | 40.0% | |
| ! | TGCCTGTCCAACATTGTTTT+TGG | + | chr3_2:16020311-16020330 | Msa0397070:intron | 40.0% |
| ATTAGAGACAGAAAAGCCGT+TGG | + | chr3_2:16020701-16020720 | Msa0397070:CDS | 40.0% | |
| !! | TCGGATAAATAACGGGTGAA+AGG | - | chr3_2:16020845-16020864 | None:intergenic | 40.0% |
| CAGAAGGTCGGATAAATAAC+GGG | - | chr3_2:16020852-16020871 | None:intergenic | 40.0% | |
| ! | TTTCCGACTCAGAGTATCAT+TGG | + | chr3_2:16020877-16020896 | Msa0397070:intron | 40.0% |
| GAACCAATGATACTCTGAGT+CGG | - | chr3_2:16020883-16020902 | None:intergenic | 40.0% | |
| ! | TCAATCATGGTTCTGTTGAC+AGG | + | chr3_2:16021157-16021176 | Msa0397070:intron | 40.0% |
| TAAATCACGTCTCGAAGACT+TGG | + | chr3_2:16021494-16021513 | Msa0397070:intron | 40.0% | |
| !! | AAAGCATTTTTCCACGAGGT+CGG | - | chr3_2:16021556-16021575 | None:intergenic | 40.0% |
| !! | CAACAAAGCATTTTTCCACG+AGG | - | chr3_2:16021560-16021579 | None:intergenic | 40.0% |
| TTGTGTTCATCCACTTGTAC+TGG | + | chr3_2:16021593-16021612 | Msa0397070:intron | 40.0% | |
| TATCCGACCTTAGGTCAATT+TGG | + | chr3_2:16021700-16021719 | Msa0397070:intron | 40.0% | |
| AAGATTAGGTGCTCTATCAC+TGG | + | chr3_2:16021725-16021744 | Msa0397070:intron | 40.0% | |
| CTCTATCACTGGAATACTTG+TGG | + | chr3_2:16021736-16021755 | Msa0397070:intron | 40.0% | |
| CAATGTGAACATATGCTTGG+TGG | - | chr3_2:16021779-16021798 | None:intergenic | 40.0% | |
| ! | ACTGTAAACAGCTTGGTGAA+AGG | + | chr3_2:16021971-16021990 | Msa0397070:intron | 40.0% |
| ! | CTGTAAACAGCTTGGTGAAA+GGG | + | chr3_2:16021972-16021991 | Msa0397070:intron | 40.0% |
| !! | AGTAACACTGCTTTTGTGTC+AGG | + | chr3_2:16022175-16022194 | Msa0397070:intron | 40.0% |
| ! | GTGACAATACGTTTTGTGTC+TGG | - | chr3_2:16022291-16022310 | None:intergenic | 40.0% |
| CGAGATATAGTCAGACTTGT+TGG | - | chr3_2:16022319-16022338 | None:intergenic | 40.0% | |
| AGTCTGACTATATCTCGTTC+AGG | + | chr3_2:16022322-16022341 | Msa0397070:intron | 40.0% | |
| TAGATTCTACTGAGTCACAG+GGG | - | chr3_2:16022448-16022467 | None:intergenic | 40.0% | |
| CATAGATTCTACTGAGTCAC+AGG | - | chr3_2:16022450-16022469 | None:intergenic | 40.0% | |
| GTGACTCAGTAGAATCTATG+AGG | + | chr3_2:16022450-16022469 | Msa0397070:intron | 40.0% | |
| ACTCAGTAGAATCTATGAGG+TGG | + | chr3_2:16022453-16022472 | Msa0397070:intron | 40.0% | |
| TGGACATTCATTTACACACG+TGG | - | chr3_2:16022520-16022539 | None:intergenic | 40.0% | |
| TGTGTAAATGAATGTCCACG+TGG | + | chr3_2:16022522-16022541 | Msa0397070:intron | 40.0% | |
| !! | TCAAAGATTCTGCTGACTCA+AGG | + | chr3_2:16023762-16023781 | Msa0397070:intron | 40.0% |
| !! | CAAAGATTCTGCTGACTCAA+GGG | + | chr3_2:16023763-16023782 | Msa0397070:intron | 40.0% |
| !! | AAAGATTCTGCTGACTCAAG+GGG | + | chr3_2:16023764-16023783 | Msa0397070:intron | 40.0% |
| !! | CCTGTAATATAGGCCACTTT+TGG | - | chr3_2:16023864-16023883 | None:intergenic | 40.0% |
| CCAAAAGTGGCCTATATTAC+AGG | + | chr3_2:16023861-16023880 | Msa0397070:intron | 40.0% | |
| TATAGACGCAACTCAAAACG+TGG | - | chr3_2:16024086-16024105 | None:intergenic | 40.0% | |
| TTTCCGATCTGTTCTTGAGT+TGG | + | chr3_2:16024289-16024308 | Msa0397070:intron | 40.0% | |
| AGACCAACTCAAGAACAGAT+CGG | - | chr3_2:16024295-16024314 | None:intergenic | 40.0% | |
| GACCTTACATGAACACTACA+CGG | + | chr3_2:16024775-16024794 | Msa0397070:CDS | 40.0% | |
| TTCCGTGTAGTGTTCATGTA+AGG | - | chr3_2:16024780-16024799 | None:intergenic | 40.0% | |
| GAGGAACTTTCTGTGATTGA+TGG | + | chr3_2:16024800-16024819 | Msa0397070:exon | 40.0% | |
| GAACTTTCTGTGATTGATGG+AGG | + | chr3_2:16024803-16024822 | Msa0397070:exon | 40.0% | |
| TTGAGACACTAAACTCAGCA+AGG | + | chr3_2:16025028-16025047 | Msa0397070:three_prime_UTR | 40.0% | |
| TGAGACACTAAACTCAGCAA+GGG | + | chr3_2:16025029-16025048 | Msa0397070:three_prime_UTR | 40.0% | |
| GCTGAAAGAATGAATCGTGG+TGG | + | chr3_2:16019465-16019484 | Msa0397070:CDS | 45.0% | |
| AAGAATGAATCGTGGTGGTC+AGG | + | chr3_2:16019470-16019489 | Msa0397070:CDS | 45.0% | |
| GACAAGTAGCAAGAGGAGTA+AGG | - | chr3_2:16019806-16019825 | None:intergenic | 45.0% | |
| ATCTTGGTTCATGAACACCG+AGG | + | chr3_2:16020522-16020541 | Msa0397070:CDS | 45.0% | |
| TTAAACCATCTGGCACACCT+CGG | - | chr3_2:16020542-16020561 | None:intergenic | 45.0% | |
| GCTAATATGCTGTTCCTTGC+AGG | + | chr3_2:16020664-16020683 | Msa0397070:intron | 45.0% | |
| TTCATGCCTTGTAACCTGCA+AGG | - | chr3_2:16020681-16020700 | None:intergenic | 45.0% | |
| ACCGTGATGTCCATAGCATT+TGG | + | chr3_2:16021004-16021023 | Msa0397070:intron | 45.0% | |
| GCCAAATGCTATGGACATCA+CGG | - | chr3_2:16021008-16021027 | None:intergenic | 45.0% | |
| AGATCAATCATGCAGGAGAC+TGG | - | chr3_2:16021076-16021095 | None:intergenic | 45.0% | |
| TTATGCTCTTGCAGGCGATT+AGG | - | chr3_2:16021220-16021239 | None:intergenic | 45.0% | |
| TGCAGGAGTAGCATCTAATG+AGG | + | chr3_2:16021310-16021329 | Msa0397070:intron | 45.0% | |
| ACGTGTACAGTAGTTTAGCC+AGG | + | chr3_2:16021349-16021368 | Msa0397070:intron | 45.0% | |
| GATTCATATAACCGACCTCG+TGG | + | chr3_2:16021542-16021561 | Msa0397070:intron | 45.0% | |
| ATAACACAGGCCAGTACAAG+TGG | - | chr3_2:16021606-16021625 | None:intergenic | 45.0% | |
| !!! | TTTGTGTCTGGTTTTGGCAC+CGG | - | chr3_2:16022279-16022298 | None:intergenic | 45.0% |
| GCGTGACACGTCATCAAAAA+AGG | + | chr3_2:16023722-16023741 | Msa0397070:intron | 45.0% | |
| AGTCAGCAGAATCTTTGACG+TGG | - | chr3_2:16023760-16023779 | None:intergenic | 45.0% | |
| ACATGAACACTACACGGAAG+AGG | + | chr3_2:16024781-16024800 | Msa0397070:CDS | 45.0% | |
| ! | TGTTACTGTGCTGTTAGTGC+AGG | + | chr3_2:16024841-16024860 | Msa0397070:three_prime_UTR | 45.0% |
| !! | TTAATGAATTATTATATTTA+AGG | - | chr3_2:16020359-16020378 | None:intergenic | 5.0% |
| !!! | TGAAATTTTTTTAAAAAATA+CGG | - | chr3_2:16023480-16023499 | None:intergenic | 5.0% |
| !! | AAAAAAATATTAAAAAATTC+TGG | - | chr3_2:16023525-16023544 | None:intergenic | 5.0% |
| !! | TAAAAAAAATTAAAAAATTC+TGG | - | chr3_2:16023634-16023653 | None:intergenic | 5.0% |
| !!! | TATTTTATATTTTTTTTTTG+GGG | - | chr3_2:16023684-16023703 | None:intergenic | 5.0% |
| ATGAATCGTGGTGGTCAGGT+TGG | + | chr3_2:16019474-16019493 | Msa0397070:intron | 50.0% | |
| TTCACGGGCCTGATTCAAAG+AGG | - | chr3_2:16019713-16019732 | None:intergenic | 50.0% | |
| GCTGTTCCTTGCAGGTTACA+AGG | + | chr3_2:16020672-16020691 | Msa0397070:intron | 50.0% | |
| GTTCTGTTGACAGGTTACCC+TGG | + | chr3_2:16021166-16021185 | Msa0397070:intron | 50.0% | |
| ! | TTATTAGGGGCTTCTAGGGG+TGG | - | chr3_2:16021383-16021402 | None:intergenic | 50.0% |
| ACAGGGGCTAAACCCAAAAG+TGG | + | chr3_2:16023848-16023867 | Msa0397070:intron | 50.0% | |
| AGCTTCGGGCATGGTTCCAA+CGG | - | chr3_2:16020720-16020739 | None:intergenic | 55.0% | |
| ATGCGGATAAGCTTCGGGCA+TGG | - | chr3_2:16020729-16020748 | None:intergenic | 55.0% | |
| GCTCTTGCAGGCGATTAGGT+GGG | - | chr3_2:16021216-16021235 | None:intergenic | 55.0% | |
| TGCTCTTGCAGGCGATTAGG+TGG | - | chr3_2:16021217-16021236 | None:intergenic | 55.0% | |
| TACTGAGTCACAGGGGTCAG+GGG | - | chr3_2:16022441-16022460 | None:intergenic | 55.0% | |
| CTACTGAGTCACAGGGGTCA+GGG | - | chr3_2:16022442-16022461 | None:intergenic | 55.0% | |
| TCTACTGAGTCACAGGGGTC+AGG | - | chr3_2:16022443-16022462 | None:intergenic | 55.0% | |
| !! | TCTGCTGACTCAAGGGGTTC+AGG | + | chr3_2:16023770-16023789 | Msa0397070:intron | 55.0% |
| !! | CTGCTGACTCAAGGGGTTCA+GGG | + | chr3_2:16023771-16023790 | Msa0397070:intron | 55.0% |
| !! | TGCTGACTCAAGGGGTTCAG+GGG | + | chr3_2:16023772-16023791 | Msa0397070:intron | 55.0% |
| GAACACCGAGGTGTGCCAGA+TGG | + | chr3_2:16020534-16020553 | Msa0397070:CDS | 60.0% | |
| CTAGGGGTGGTCTTCTCACC+TGG | - | chr3_2:16021370-16021389 | None:intergenic | 60.0% | |
| !! | TCTATGAGGTGGCGCTGACG+TGG | + | chr3_2:16022464-16022483 | Msa0397070:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 16019441 | 16025190 | 16019441 | ID=Msa0397070;Name=Msa0397070 |
| chr3_2 | mRNA | 16019441 | 16025190 | 16019441 | ID=Msa0397070-mRNA-1;Parent=Msa0397070;Name=Msa0397070-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.66|0.42|0.85|0.66|0.57|7|349|169 |
| chr3_2 | exon | 16019441 | 16019491 | 16019441 | ID=Msa0397070-mRNA-1:exon:3607;Parent=Msa0397070-mRNA-1 |
| chr3_2 | exon | 16020471 | 16020614 | 16020471 | ID=Msa0397070-mRNA-1:exon:3608;Parent=Msa0397070-mRNA-1 |
| chr3_2 | exon | 16020686 | 16020775 | 16020686 | ID=Msa0397070-mRNA-1:exon:3609;Parent=Msa0397070-mRNA-1 |
| chr3_2 | exon | 16022237 | 16022305 | 16022237 | ID=Msa0397070-mRNA-1:exon:3610;Parent=Msa0397070-mRNA-1 |
| chr3_2 | exon | 16024047 | 16024109 | 16024047 | ID=Msa0397070-mRNA-1:exon:3611;Parent=Msa0397070-mRNA-1 |
| chr3_2 | exon | 16024723 | 16025142 | 16024723 | ID=Msa0397070-mRNA-1:exon:3612;Parent=Msa0397070-mRNA-1 |
| chr3_2 | exon | 16025169 | 16025190 | 16025169 | ID=Msa0397070-mRNA-1:exon:3613;Parent=Msa0397070-mRNA-1 |
| chr3_2 | CDS | 16019441 | 16019491 | 16019441 | ID=Msa0397070-mRNA-1:cds;Parent=Msa0397070-mRNA-1 |
| chr3_2 | CDS | 16020471 | 16020614 | 16020471 | ID=Msa0397070-mRNA-1:cds;Parent=Msa0397070-mRNA-1 |
| chr3_2 | CDS | 16020686 | 16020775 | 16020686 | ID=Msa0397070-mRNA-1:cds;Parent=Msa0397070-mRNA-1 |
| chr3_2 | CDS | 16022237 | 16022305 | 16022237 | ID=Msa0397070-mRNA-1:cds;Parent=Msa0397070-mRNA-1 |
| chr3_2 | CDS | 16024047 | 16024109 | 16024047 | ID=Msa0397070-mRNA-1:cds;Parent=Msa0397070-mRNA-1 |
| chr3_2 | CDS | 16024723 | 16024815 | 16024723 | ID=Msa0397070-mRNA-1:cds;Parent=Msa0397070-mRNA-1 |
| chr3_2 | three_prime_UTR | 16024816 | 16025142 | 16024816 | ID=Msa0397070-mRNA-1:three_prime_utr;Parent=Msa0397070-mRNA-1 |
| chr3_2 | three_prime_UTR | 16025169 | 16025190 | 16025169 | ID=Msa0397070-mRNA-1:three_prime_utr;Parent=Msa0397070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
