AlfalfaGEDB | Msa1082050

M. sativa cultivar zhongmu-4 / Msa1082050

KEGG: K02883
GO: GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005829 GO:0005840 GO:0005886 GO:0005911 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009506 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0015934 GO:0016020 GO:0019538 GO:0022625 GO:0022626 GO:0030054 GO:0031090 GO:0032991 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0055044 GO:0071704 GO:0071944 GO:0097159 GO:0098588 GO:0098805 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904
PFAM: PF17135.7

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1082050	XP_013450365.1	100.000	188	0	0	1	188	1	188	1.79e-130	374

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1082050	sp\|Q940B0\|RL183_ARATH	84.574	188	28	1	1	188	1	187	2.30e-112	320

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1082050	A0A072U5K2	100.000	188	0	0	1	188	1	188	8.54e-131	374

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0001760	Msa1082050	0.805089	1.579590e-49	-8.615850e-47
Msa0003030	Msa1082050	0.814576	1.435706e-51	-8.615850e-47
Msa0003330	Msa1082050	0.806919	6.510526e-50	-8.615850e-47
Msa0027590	Msa1082050	0.804515	2.082122e-49	-8.615850e-47
Msa0042510	Msa1082050	0.853147	2.895130e-61	-8.615850e-47
Msa0071640	Msa1082050	0.815119	1.088247e-51	-8.615850e-47
Msa0079560	Msa1082050	0.856465	3.159534e-62	-8.615850e-47
Msa0086160	Msa1082050	0.811500	6.788505e-51	-8.615850e-47
Msa0602900	Msa1082050	0.823525	1.321785e-53	-8.615850e-47
Msa0609120	Msa1082050	0.828060	1.108776e-54	-8.615850e-47
Msa0619230	Msa1082050	0.859574	3.763693e-63	-8.615850e-47
Msa0621190	Msa1082050	0.865055	7.789639e-65	-8.615850e-47
Msa0643960	Msa1082050	0.819889	9.163070e-53	-8.615850e-47
Msa0656450	Msa1082050	0.854602	1.103468e-61	-8.615850e-47
Msa0686550	Msa1082050	0.806452	8.171314e-50	-8.615850e-47
Msa0691760	Msa1082050	0.831672	1.461509e-55	-8.615850e-47
Msa0694400	Msa1082050	0.840834	6.849805e-58	-8.615850e-47
Msa0700370	Msa1082050	0.855707	5.267662e-62	-8.615850e-47
Msa0704860	Msa1082050	0.810724	9.998794e-51	-8.615850e-47
Msa0708630	Msa1082050	0.836460	9.240396e-57	-8.615850e-47
Msa0718560	Msa1082050	0.833208	6.086860e-56	-8.615850e-47
Msa0790450	Msa1082050	0.864741	9.778008e-65	-8.615850e-47
Msa0834220	Msa1082050	0.866394	2.943772e-65	-8.615850e-47
Msa0127230	Msa1082050	0.849324	3.479809e-60	-8.615850e-47
Msa0128330	Msa1082050	0.812817	3.502803e-51	-8.615850e-47
Msa0132460	Msa1082050	0.835218	1.907384e-56	-8.615850e-47
Msa0146910	Msa1082050	0.811151	8.081534e-51	-8.615850e-47
Msa0167860	Msa1082050	0.845694	3.461719e-59	-8.615850e-47
Msa0168320	Msa1082050	0.850309	1.846245e-60	-8.615850e-47
Msa0172300	Msa1082050	0.817582	3.060976e-52	-8.615850e-47
Msa0174580	Msa1082050	0.801568	8.470083e-49	-8.615850e-47
Msa0182050	Msa1082050	0.837735	4.360785e-57	-8.615850e-47
Msa0182100	Msa1082050	0.875383	3.217694e-68	-8.615850e-47
Msa0183840	Msa1082050	0.800692	1.279103e-48	-8.615850e-47
Msa0188740	Msa1082050	0.865907	4.200396e-65	-8.615850e-47
Msa0192300	Msa1082050	0.886750	2.606855e-72	-8.615850e-47
Msa0195030	Msa1082050	0.802011	6.868748e-49	-8.615850e-47
Msa0234900	Msa1082050	0.802649	5.074408e-49	-8.615850e-47
Msa0237180	Msa1082050	0.805036	1.620355e-49	-8.615850e-47
Msa0371490	Msa1082050	0.859933	2.934443e-63	-8.615850e-47
Msa0373350	Msa1082050	0.825122	5.568147e-54	-8.615850e-47
Msa0376850	Msa1082050	0.820370	7.110028e-53	-8.615850e-47
Msa0377370	Msa1082050	0.821461	3.989234e-53	-8.615850e-47
Msa0382670	Msa1082050	0.849951	2.325340e-60	-8.615850e-47
Msa0388520	Msa1082050	0.821316	4.308410e-53	-8.615850e-47
Msa0416470	Msa1082050	0.838247	3.221529e-57	-8.615850e-47
Msa0421920	Msa1082050	0.807086	6.000343e-50	-8.615850e-47
Msa0426090	Msa1082050	0.821457	3.997256e-53	-8.615850e-47
Msa0426250	Msa1082050	0.810220	1.284506e-50	-8.615850e-47
Msa0426940	Msa1082050	0.807949	3.936361e-50	-8.615850e-47
Msa0472480	Msa1082050	0.823220	1.557349e-53	-8.615850e-47
Msa0482560	Msa1082050	0.804444	2.153827e-49	-8.615850e-47
Msa1025220	Msa1082050	0.804680	1.922869e-49	-8.615850e-47
Msa1082050	Msa1124980	0.804001	2.663808e-49	-8.615850e-47
Msa1082050	Msa1126690	0.868285	7.316429e-66	-8.615850e-47
Msa1082050	Msa1156830	0.808133	3.597107e-50	-8.615850e-47
Msa1082050	Msa1165210	0.803488	3.403468e-49	-8.615850e-47
Msa1082050	Msa1227350	0.835185	1.944027e-56	-8.615850e-47
Msa1082050	Msa1235950	0.848232	6.989577e-60	-8.615850e-47
Msa1082050	Msa1235980	0.853615	2.126203e-61	-8.615850e-47
Msa1082050	Msa1237040	0.863323	2.701489e-64	-8.615850e-47
Msa1082050	Msa1258540	0.801717	7.891251e-49	-8.615850e-47
Msa1082050	Msa1284800	0.859360	4.364609e-63	-8.615850e-47
Msa1082050	Msa1296090	0.801833	7.470449e-49	-8.615850e-47
Msa1082050	Msa1316100	0.812115	4.985600e-51	-8.615850e-47
Msa1082050	Msa1317390	0.881639	2.031159e-70	-8.615850e-47
Msa1082050	Msa1341780	0.820137	8.040200e-53	-8.615850e-47
Msa1082050	Msa1351020	0.847388	1.193694e-59	-8.615850e-47
Msa1082050	Msa1367540	0.816915	4.322517e-52	-8.615850e-47
Msa1082050	Msa1385480	0.835619	1.509717e-56	-8.615850e-47
Msa1082050	Msa1387750	0.882955	6.746577e-71	-8.615850e-47
Msa1082050	Msa1390760	0.861694	8.569057e-64	-8.615850e-47
Msa1082050	Msa1403520	0.839417	1.604829e-57	-8.615850e-47
Msa1082050	Msa1407550	0.885476	7.866718e-72	-8.615850e-47
Msa1082050	Msa1413570	0.852695	3.898998e-61	-8.615850e-47
Msa1082050	Msa1424570	0.843602	1.266794e-58	-8.615850e-47
Msa1082050	Msa1432310	0.824600	7.391166e-54	-8.615850e-47
Msa1082050	Msa1446510	0.848373	6.389353e-60	-8.615850e-47
Msa1082050	Msa1450560	0.867710	1.119341e-65	-8.615850e-47
Msa1082050	Msa1463570	0.810382	1.184916e-50	-8.615850e-47
Msa1082050	Msa1465700	0.869450	3.069193e-66	-8.615850e-47
Msa1082050	Msa1465890	0.831085	2.038027e-55	-8.615850e-47
Msa0270160	Msa1082050	0.861654	8.815605e-64	-8.615850e-47
Msa0274940	Msa1082050	0.804143	2.488289e-49	-8.615850e-47
Msa0277600	Msa1082050	0.816898	4.362093e-52	-8.615850e-47
Msa0281370	Msa1082050	0.802774	4.782479e-49	-8.615850e-47
Msa0301250	Msa1082050	0.898707	4.075401e-77	-8.615850e-47
Msa0313060	Msa1082050	0.873068	1.957349e-67	-8.615850e-47
Msa0315430	Msa1082050	0.837426	5.236264e-57	-8.615850e-47
Msa0315660	Msa1082050	0.804808	1.808255e-49	-8.615850e-47
Msa0511760	Msa1082050	0.849583	2.946010e-60	-8.615850e-47
Msa0516830	Msa1082050	0.821457	3.997256e-53	-8.615850e-47
Msa0521730	Msa1082050	0.808808	2.581616e-50	-8.615850e-47
Msa0547920	Msa1082050	0.827260	1.725513e-54	-8.615850e-47
Msa0573550	Msa1082050	0.850771	1.369055e-60	-8.615850e-47
Msa0574780	Msa1082050	0.885101	1.086668e-71	-8.615850e-47
Msa0578010	Msa1082050	0.844701	6.421270e-59	-8.615850e-47
Msa0597240	Msa1082050	0.809602	1.745141e-50	-8.615850e-47
Msa0929700	Msa1082050	0.849574	2.962743e-60	-8.615850e-47
Msa0930100	Msa1082050	0.822084	2.861936e-53	-8.615850e-47
Msa0930360	Msa1082050	0.875226	3.642220e-68	-8.615850e-47
Msa0930790	Msa1082050	0.810297	1.236423e-50	-8.615850e-47
Msa0930890	Msa1082050	0.838591	2.626515e-57	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1082050	MtrunA17_Chr7g0269451	100.000	188	0	0	1	188	1	188	1.64e-134	374
Msa1082050	MtrunA17_Chr1g0192271	91.489	188	15	1	1	188	1	187	8.09e-122	342
Msa1082050	MtrunA17_Chr7g0272381	86.702	188	24	1	1	188	1	187	6.74e-117	329

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1082050	AT5G27850.1	84.574	188	28	1	1	188	1	187	2.34e-113	320
Msa1082050	AT3G05590.1	83.511	188	30	1	1	188	1	187	3.75e-111	315
Msa1082050	AT2G47570.1	77.540	187	40	2	3	188	1	186	9.79e-101	288
Msa1082050	AT5G27850.2	82.963	135	22	1	54	188	1	134	1.24e-77	228
Msa1082050	AT3G05590.3	82.222	135	23	1	54	188	1	134	4.82e-77	227
Msa1082050	AT3G05590.2	82.222	135	23	1	54	188	1	134	4.82e-77	227

Find 83 sgRNAs with CRISPR-Local

Find 322 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGCGGTACGTTTAGTCTTCT+TGG	0.192478	7_2:-82003698	None:intergenic
TTATGAAGTACCTGCAATTA+AGG	0.289178	7_2:+82004506	Msa1082050:CDS
CTGGCTCTTAGAGCTCCTTT+AGG	0.297513	7_2:+82004606	Msa1082050:CDS
AGGTAGATATCATTGGATTT+TGG	0.303386	7_2:-82003721	None:intergenic
TTGCACTTTAAATGCAATAT+AGG	0.304283	7_2:-82005758	None:intergenic
AGCCACCACTATCACTTTCT+AGG	0.308293	7_2:+82003945	Msa1082050:CDS
TGGCTCTTAGAGCTCCTTTA+GGG	0.321716	7_2:+82004607	Msa1082050:CDS
GTGCCGTGACAGATGACATT+AGG	0.331949	7_2:+82004481	Msa1082050:CDS
ATGTTTCAGGTTCTTCTTAG+AGG	0.334993	7_2:+82005268	Msa1082050:intron
TGATAATGAGATATGATAAT+AGG	0.339000	7_2:-82005468	None:intergenic
GACTGAAAGTAATTTCAATA+AGG	0.349360	7_2:+82003886	Msa1082050:CDS
AGGCTTTAAAGTTTGAGTTT+TGG	0.349919	7_2:+82005423	Msa1082050:exon
CTGCGGCCGAACGAGAGAAA+TGG	0.359660	7_2:-82003526	None:intergenic
AGAGCAGTTACCTTAATTGC+AGG	0.362185	7_2:-82004516	None:intergenic
TTATTTGAGTTTAAAGTAGT+AGG	0.365650	7_2:+82005716	Msa1082050:three_prime_UTR
TCAATAAGGTTATCCTTAAG+AGG	0.371127	7_2:+82003900	Msa1082050:CDS
TGCGGCCGAACGAGAGAAAT+GGG	0.372708	7_2:-82003525	None:intergenic
TGCTCATGAAAAGCCTCTTA+AGG	0.380870	7_2:-82003913	None:intergenic
TTGAAGCCGCTAGAGGAAAA+AGG	0.383923	7_2:+82005392	Msa1082050:CDS
CTACCTCAAGCTTCTCGTTA+AGG	0.389550	7_2:+82003738	Msa1082050:CDS
TGCCGTGACAGATGACATTA+GGG	0.403697	7_2:+82004482	Msa1082050:CDS
CAATTAAGGTAACTGCTCTA+AGG	0.406837	7_2:+82004520	Msa1082050:CDS
TTATCATATCTCATTATCAT+TGG	0.408608	7_2:+82005472	Msa1082050:three_prime_UTR
AAGCTTGAGGTAGATATCAT+TGG	0.411467	7_2:-82003728	None:intergenic
GTGCCTCACCTTTGATCAGC+TGG	0.415929	7_2:+82004587	Msa1082050:CDS
TCTTGTGCGCTCGTAGTGTT+GGG	0.441971	7_2:+82005675	Msa1082050:three_prime_UTR
TTCTTGTGCGCTCGTAGTGT+TGG	0.445083	7_2:+82005674	Msa1082050:three_prime_UTR
TCCTTCTCCCCAAGTGGAAA+AGG	0.454454	7_2:+82005555	Msa1082050:three_prime_UTR
TGCTCTAAGGTTCACCGAAA+AGG	0.469427	7_2:+82004533	Msa1082050:CDS
TTCGCAGGGTATCGATTTGA+AGG	0.470824	7_2:+82003663	Msa1082050:intron
GGTAAGATTGCTGTAGTTGT+TGG	0.475236	7_2:+82004459	Msa1082050:CDS
CTAGCCCCATTTCTCTCGTT+CGG	0.479520	7_2:+82003520	Msa1082050:five_prime_UTR
AAGCACTTTGGACGAGCTCC+TGG	0.482073	7_2:+82005316	Msa1082050:CDS
CGTGAGGCTGTCAAGCACTT+TGG	0.482505	7_2:+82005304	Msa1082050:CDS
CAGGGTATCGATTTGAAGGC+AGG	0.483139	7_2:+82003667	Msa1082050:intron
TAAGGTTCACCGAAAAGGCC+AGG	0.486544	7_2:+82004538	Msa1082050:CDS
GTGCGCTCGTAGTGTTGGGA+AGG	0.487077	7_2:+82005679	Msa1082050:three_prime_UTR
CATACCGTGTTCTGCCCTAA+AGG	0.491830	7_2:-82004621	None:intergenic
CGCTCGTAGTGTTGGGAAGG+GGG	0.492651	7_2:+82005682	Msa1082050:three_prime_UTR
CATTAAACGTCTCGACACTA+AGG	0.493260	7_2:+82005819	Msa1082050:three_prime_UTR
CCAAGTGGAAAAGGAATGAA+TGG	0.497670	7_2:+82005564	Msa1082050:three_prime_UTR
AGCCTTCTCAATTCTAGCCC+TGG	0.500353	7_2:-82004556	None:intergenic
CGAACGAGAGAAATGGGGCT+AGG	0.509790	7_2:-82003519	None:intergenic
ATTGTTCACAACACCACAAA+GGG	0.510119	7_2:-82005515	None:intergenic
ACGATTATATACCTTTCCCT+TGG	0.511518	7_2:-82003981	None:intergenic
GCGCTCGTAGTGTTGGGAAG+GGG	0.517946	7_2:+82005681	Msa1082050:three_prime_UTR
TGAGATATGATAATAGGAAA+GGG	0.518647	7_2:-82005462	None:intergenic
GTGTTGCTGTGTGGCACACC+AGG	0.524962	7_2:-82005334	None:intergenic
TGCGCTCGTAGTGTTGGGAA+GGG	0.527136	7_2:+82005680	Msa1082050:three_prime_UTR
CAGTCCTTCGAACAAGGAAA+CGG	0.531384	7_2:-82003868	None:intergenic
TGGAAAAGGAATGAATGGAT+TGG	0.540570	7_2:+82005569	Msa1082050:three_prime_UTR
ATGAGATATGATAATAGGAA+AGG	0.541574	7_2:-82005463	None:intergenic
TACTTTCAGTCCTTCGAACA+AGG	0.547564	7_2:-82003874	None:intergenic
ATCAACCTAGAAAGTGATAG+TGG	0.548653	7_2:-82003950	None:intergenic
CTAGAATTGAGAAGGCTGGT+GGG	0.553032	7_2:+82004562	Msa1082050:CDS
AGGTTGATTCGTTACACCAA+GGG	0.558600	7_2:+82003965	Msa1082050:CDS
AAAGTGCTTGACAGCCTCAC+GGG	0.558822	7_2:-82005302	None:intergenic
GAACGAGAGAAATGGGGCTA+GGG	0.565419	7_2:-82003518	None:intergenic
GATTCGTTACACCAAGGGAA+AGG	0.565427	7_2:+82003970	Msa1082050:CDS
TATACCGTTTCCTTGTTCGA+AGG	0.566828	7_2:+82003864	Msa1082050:CDS
AGGGCTAGAATTGAGAAGGC+TGG	0.575107	7_2:+82004558	Msa1082050:CDS
CAAAGTGCTTGACAGCCTCA+CGG	0.580659	7_2:-82005303	None:intergenic
CGAAAGGTTGAAGCCGCTAG+AGG	0.583684	7_2:+82005385	Msa1082050:CDS
GCTAGAATTGAGAAGGCTGG+TGG	0.586828	7_2:+82004561	Msa1082050:CDS
TCTAAGAGCCAGCTGATCAA+AGG	0.589919	7_2:-82004595	None:intergenic
ATTAAACGTCTCGACACTAA+GGG	0.600415	7_2:+82005820	Msa1082050:three_prime_UTR
TAGAATTGAGAAGGCTGGTG+GGG	0.601753	7_2:+82004563	Msa1082050:CDS
GAAGCTTCTTCTTCTAGCTG+CGG	0.601908	7_2:-82003543	None:intergenic
TTAGCGTCCTTCTCCCCAAG+TGG	0.609019	7_2:+82005549	Msa1082050:three_prime_UTR
AACCCTAATGTCATCTGTCA+CGG	0.612086	7_2:-82004484	None:intergenic
GGCCAGGGCTAGAATTGAGA+AGG	0.617622	7_2:+82004554	Msa1082050:CDS
AGCTCCTTTAGGGCAGAACA+CGG	0.621376	7_2:+82004617	Msa1082050:CDS
AACACTAAGCCCTATGTCCG+TGG	0.624133	7_2:+82005352	Msa1082050:CDS
AAGGTTCACCGAAAAGGCCA+GGG	0.631182	7_2:+82004539	Msa1082050:CDS
ATACCTTAACGAGAAGCTTG+AGG	0.643723	7_2:-82003741	None:intergenic
TAGGTTGATTCGTTACACCA+AGG	0.646840	7_2:+82003964	Msa1082050:CDS
AATTGTTCACAACACCACAA+AGG	0.654715	7_2:-82005516	None:intergenic
AACCTAGAAAGTGATAGTGG+TGG	0.668105	7_2:-82003947	None:intergenic
AAGAAGAAGCTTCTTCACCA+TGG	0.669291	7_2:+82003553	Msa1082050:exon
GAGCCAGCTGATCAAAGGTG+AGG	0.684975	7_2:-82004590	None:intergenic
GCGGCCGAACGAGAGAAATG+GGG	0.685446	7_2:-82003524	None:intergenic
GGTATCGATTTGAAGGCAGG+AGG	0.701621	7_2:+82003670	Msa1082050:CDS
TAGGGCTTAGTGTTGCTGTG+TGG	0.709531	7_2:-82005343	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TGTTATAAACTTTTAATCTT+TGG	-	chr7_2:82004751-82004770	None:intergenic	15.0%
!!!	TTTACTTTGTTTTGAAATAT+TGG	+	chr7_2:82004919-82004938	Msa1082050:intron	15.0%
!!!	TGGTAAACATATTATTTTAT+AGG	-	chr7_2:82005007-82005026	None:intergenic	15.0%
!!!	TGTTATAAACTTTTAATCTT+TGG	-	chr7_2:82004751-82004770	None:intergenic	15.0%
!!!	TTTACTTTGTTTTGAAATAT+TGG	+	chr7_2:82004919-82004938	Msa1082050:intron	15.0%
!!!	TGGTAAACATATTATTTTAT+AGG	-	chr7_2:82005007-82005026	None:intergenic	15.0%
!!	ATGCAATAGCTTATAAAAAT+GGG	+	chr7_2:82004122-82004141	Msa1082050:intron	20.0%
!!	AATGAATAGAATGATAAATG+TGG	+	chr7_2:82004877-82004896	Msa1082050:intron	20.0%
!!!	TATTATTTTATAGGCTGTAT+TGG	-	chr7_2:82004998-82005017	None:intergenic	20.0%
!!	TACTAAAGCAAAATAAAAAC+AGG	-	chr7_2:82005046-82005065	None:intergenic	20.0%
!!	ATAAAAAAGGCAACAAAAAT+AGG	-	chr7_2:82005148-82005167	None:intergenic	20.0%
!!	TCCTAAAGATGTAATAAAAA+AGG	-	chr7_2:82005161-82005180	None:intergenic	20.0%
!!!	TTTTCTTGTATTAATGTTTC+AGG	+	chr7_2:82005255-82005274	Msa1082050:intron	20.0%
!!!	TGATAATGAGATATGATAAT+AGG	-	chr7_2:82005471-82005490	None:intergenic	20.0%
!!	TTATCATATCTCATTATCAT+TGG	+	chr7_2:82005472-82005491	Msa1082050:three_prime_UTR	20.0%
!!!	TTATTTGAGTTTAAAGTAGT+AGG	+	chr7_2:82005716-82005735	Msa1082050:three_prime_UTR	20.0%
!!	ATGCAATAGCTTATAAAAAT+GGG	+	chr7_2:82004122-82004141	Msa1082050:intron	20.0%
!!	AATGAATAGAATGATAAATG+TGG	+	chr7_2:82004877-82004896	Msa1082050:intron	20.0%
!!!	TATTATTTTATAGGCTGTAT+TGG	-	chr7_2:82004998-82005017	None:intergenic	20.0%
!!	TACTAAAGCAAAATAAAAAC+AGG	-	chr7_2:82005046-82005065	None:intergenic	20.0%
!!	ATAAAAAAGGCAACAAAAAT+AGG	-	chr7_2:82005148-82005167	None:intergenic	20.0%
!!	TCCTAAAGATGTAATAAAAA+AGG	-	chr7_2:82005161-82005180	None:intergenic	20.0%
!!!	TTTTCTTGTATTAATGTTTC+AGG	+	chr7_2:82005255-82005274	Msa1082050:intron	20.0%
!!!	TGATAATGAGATATGATAAT+AGG	-	chr7_2:82005471-82005490	None:intergenic	20.0%
!!	TTATCATATCTCATTATCAT+TGG	+	chr7_2:82005472-82005491	Msa1082050:three_prime_UTR	20.0%
!!!	TTATTTGAGTTTAAAGTAGT+AGG	+	chr7_2:82005716-82005735	Msa1082050:three_prime_UTR	20.0%
!	GTTATTGTGAATCTGAATAA+TGG	+	chr7_2:82003787-82003806	Msa1082050:intron	25.0%
!	GACTGAAAGTAATTTCAATA+AGG	+	chr7_2:82003886-82003905	Msa1082050:CDS	25.0%
!	GATGCAATAGCTTATAAAAA+TGG	+	chr7_2:82004121-82004140	Msa1082050:intron	25.0%
!	AAAAAAAAAGCCTATGACAT+GGG	-	chr7_2:82004287-82004306	None:intergenic	25.0%
!	AAAAAAAAAAGCCTATGACA+TGG	-	chr7_2:82004288-82004307	None:intergenic	25.0%
!!!	TCACTTTTTTTCTTTCTTTC+TGG	+	chr7_2:82004427-82004446	Msa1082050:intron	25.0%
!!!	TTGCTGTAATTTTAGAAGTT+TGG	+	chr7_2:82004703-82004722	Msa1082050:intron	25.0%
!!!	AATTTTAGAAGTTTGGAAGT+TGG	+	chr7_2:82004710-82004729	Msa1082050:intron	25.0%
!	ACAAAGTAAAACAAAAACAC+AGG	-	chr7_2:82004909-82004928	None:intergenic	25.0%
!!	CAGAAAGTATAACAGTTATA+AGG	-	chr7_2:82004973-82004992	None:intergenic	25.0%
!!!	GCCTTTTTTATTACATCTTT+AGG	+	chr7_2:82005157-82005176	Msa1082050:intron	25.0%
!!	TTATTACATCTTTAGGAGAA+AGG	+	chr7_2:82005164-82005183	Msa1082050:intron	25.0%
!	TGAGATATGATAATAGGAAA+GGG	-	chr7_2:82005465-82005484	None:intergenic	25.0%
!	ATGAGATATGATAATAGGAA+AGG	-	chr7_2:82005466-82005485	None:intergenic	25.0%
!	TTGCACTTTAAATGCAATAT+AGG	-	chr7_2:82005761-82005780	None:intergenic	25.0%
!!!	TGCAATTTTATGTCATTTGT+GGG	+	chr7_2:82005776-82005795	Msa1082050:three_prime_UTR	25.0%
!	GTTATTGTGAATCTGAATAA+TGG	+	chr7_2:82003787-82003806	Msa1082050:intron	25.0%
!	GACTGAAAGTAATTTCAATA+AGG	+	chr7_2:82003886-82003905	Msa1082050:CDS	25.0%
!	GATGCAATAGCTTATAAAAA+TGG	+	chr7_2:82004121-82004140	Msa1082050:intron	25.0%
!	AAAAAAAAAGCCTATGACAT+GGG	-	chr7_2:82004287-82004306	None:intergenic	25.0%
!	AAAAAAAAAAGCCTATGACA+TGG	-	chr7_2:82004288-82004307	None:intergenic	25.0%
!!!	TCACTTTTTTTCTTTCTTTC+TGG	+	chr7_2:82004427-82004446	Msa1082050:intron	25.0%
!!!	TTGCTGTAATTTTAGAAGTT+TGG	+	chr7_2:82004703-82004722	Msa1082050:intron	25.0%
!!!	AATTTTAGAAGTTTGGAAGT+TGG	+	chr7_2:82004710-82004729	Msa1082050:intron	25.0%
!	ACAAAGTAAAACAAAAACAC+AGG	-	chr7_2:82004909-82004928	None:intergenic	25.0%
!!	CAGAAAGTATAACAGTTATA+AGG	-	chr7_2:82004973-82004992	None:intergenic	25.0%
!!!	GCCTTTTTTATTACATCTTT+AGG	+	chr7_2:82005157-82005176	Msa1082050:intron	25.0%
!!	TTATTACATCTTTAGGAGAA+AGG	+	chr7_2:82005164-82005183	Msa1082050:intron	25.0%
!	TGAGATATGATAATAGGAAA+GGG	-	chr7_2:82005465-82005484	None:intergenic	25.0%
!	ATGAGATATGATAATAGGAA+AGG	-	chr7_2:82005466-82005485	None:intergenic	25.0%
!	TTGCACTTTAAATGCAATAT+AGG	-	chr7_2:82005761-82005780	None:intergenic	25.0%
!!!	TGCAATTTTATGTCATTTGT+GGG	+	chr7_2:82005776-82005795	Msa1082050:three_prime_UTR	25.0%
	TCGGAGTTAGTTATAAGAAA+TGG	-	chr7_2:82003612-82003631	None:intergenic	30.0%
!	AGGTAGATATCATTGGATTT+TGG	-	chr7_2:82003724-82003743	None:intergenic	30.0%
	CAAGAGTAGAAAATGAATGA+AGG	-	chr7_2:82003768-82003787	None:intergenic	30.0%
	TCAATAAGGTTATCCTTAAG+AGG	+	chr7_2:82003900-82003919	Msa1082050:CDS	30.0%
	CTTGAACTATTATCTAGACT+GGG	-	chr7_2:82004148-82004167	None:intergenic	30.0%
	TCAAATAAGCGAATCAAAAC+AGG	+	chr7_2:82004261-82004280	Msa1082050:intron	30.0%
!	TGCATGTATGCTTTTAGATA+CGG	+	chr7_2:82004340-82004359	Msa1082050:intron	30.0%
!!	GCTTTTAGATACGGTTTTAT+TGG	+	chr7_2:82004349-82004368	Msa1082050:intron	30.0%
!!	TTTTCTTTCTTTCTGGTCTT+AGG	+	chr7_2:82004434-82004453	Msa1082050:intron	30.0%
!	TTATGAAGTACCTGCAATTA+AGG	+	chr7_2:82004506-82004525	Msa1082050:CDS	30.0%
	CAATTGCATGAAGTTTAGTT+TGG	-	chr7_2:82004784-82004803	None:intergenic	30.0%
	AAAACATGACTTCATACAAG+TGG	-	chr7_2:82004822-82004841	None:intergenic	30.0%
	GAATAGAATGATAAATGTGG+AGG	+	chr7_2:82004880-82004899	Msa1082050:intron	30.0%
!!	TTGTCTTAATTTGCAAAGAG+TGG	-	chr7_2:82005213-82005232	None:intergenic	30.0%
	ATTAAGACAACATACATCTG+AGG	+	chr7_2:82005223-82005242	Msa1082050:intron	30.0%
!!!	AGGCTTTAAAGTTTGAGTTT+TGG	+	chr7_2:82005423-82005442	Msa1082050:exon	30.0%
!!	GTGCAATTTTATGTCATTTG+TGG	+	chr7_2:82005775-82005794	Msa1082050:three_prime_UTR	30.0%
	TCGGAGTTAGTTATAAGAAA+TGG	-	chr7_2:82003612-82003631	None:intergenic	30.0%
!	AGGTAGATATCATTGGATTT+TGG	-	chr7_2:82003724-82003743	None:intergenic	30.0%
	CAAGAGTAGAAAATGAATGA+AGG	-	chr7_2:82003768-82003787	None:intergenic	30.0%
	TCAATAAGGTTATCCTTAAG+AGG	+	chr7_2:82003900-82003919	Msa1082050:CDS	30.0%
	CTTGAACTATTATCTAGACT+GGG	-	chr7_2:82004148-82004167	None:intergenic	30.0%
	TCAAATAAGCGAATCAAAAC+AGG	+	chr7_2:82004261-82004280	Msa1082050:intron	30.0%
!	TGCATGTATGCTTTTAGATA+CGG	+	chr7_2:82004340-82004359	Msa1082050:intron	30.0%
!!	GCTTTTAGATACGGTTTTAT+TGG	+	chr7_2:82004349-82004368	Msa1082050:intron	30.0%
!!	TTTTCTTTCTTTCTGGTCTT+AGG	+	chr7_2:82004434-82004453	Msa1082050:intron	30.0%
!	TTATGAAGTACCTGCAATTA+AGG	+	chr7_2:82004506-82004525	Msa1082050:CDS	30.0%
	CAATTGCATGAAGTTTAGTT+TGG	-	chr7_2:82004784-82004803	None:intergenic	30.0%
	AAAACATGACTTCATACAAG+TGG	-	chr7_2:82004822-82004841	None:intergenic	30.0%
	GAATAGAATGATAAATGTGG+AGG	+	chr7_2:82004880-82004899	Msa1082050:intron	30.0%
!!	TTGTCTTAATTTGCAAAGAG+TGG	-	chr7_2:82005213-82005232	None:intergenic	30.0%
	ATTAAGACAACATACATCTG+AGG	+	chr7_2:82005223-82005242	Msa1082050:intron	30.0%
!!!	AGGCTTTAAAGTTTGAGTTT+TGG	+	chr7_2:82005423-82005442	Msa1082050:exon	30.0%
!!	GTGCAATTTTATGTCATTTG+TGG	+	chr7_2:82005775-82005794	Msa1082050:three_prime_UTR	30.0%
!!	GATATCATTGGATTTTGGTG+CGG	-	chr7_2:82003719-82003738	None:intergenic	35.0%
	AAGCTTGAGGTAGATATCAT+TGG	-	chr7_2:82003731-82003750	None:intergenic	35.0%
	ATCAACCTAGAAAGTGATAG+TGG	-	chr7_2:82003953-82003972	None:intergenic	35.0%
	ACGATTATATACCTTTCCCT+TGG	-	chr7_2:82003984-82004003	None:intergenic	35.0%
	GCTTGAACTATTATCTAGAC+TGG	-	chr7_2:82004149-82004168	None:intergenic	35.0%
!	TGTTTTTCCAAACACTCGTA+TGG	+	chr7_2:82004217-82004236	Msa1082050:intron	35.0%
	ATAAGTACCATACGAGTGTT+TGG	-	chr7_2:82004227-82004246	None:intergenic	35.0%
!!	GGTTGATGAAGAGATAACAT+TGG	+	chr7_2:82004370-82004389	Msa1082050:intron	35.0%
	CAATTAAGGTAACTGCTCTA+AGG	+	chr7_2:82004520-82004539	Msa1082050:CDS	35.0%
!	ACTTTTATACCTATCTGCTG+CGG	+	chr7_2:82005084-82005103	Msa1082050:intron	35.0%
!	GCGGCAAATTAGATCAATTT+TGG	+	chr7_2:82005103-82005122	Msa1082050:intron	35.0%
!!	ATGTTTCAGGTTCTTCTTAG+AGG	+	chr7_2:82005268-82005287	Msa1082050:intron	35.0%
!!!	GATTTTTTTCCACGGACATA+GGG	-	chr7_2:82005364-82005383	None:intergenic	35.0%
!!!	TGATTTTTTTCCACGGACAT+AGG	-	chr7_2:82005365-82005384	None:intergenic	35.0%
!!!	CCTTTCGTGATTTTTTTCCA+CGG	-	chr7_2:82005372-82005391	None:intergenic	35.0%
!!!	TGTTTTGTTTTCTCCCTTTG+TGG	+	chr7_2:82005502-82005521	Msa1082050:three_prime_UTR	35.0%
	ATTGTTCACAACACCACAAA+GGG	-	chr7_2:82005518-82005537	None:intergenic	35.0%
	AATTGTTCACAACACCACAA+AGG	-	chr7_2:82005519-82005538	None:intergenic	35.0%
!	ATTCATTCCTTTTCCACTTG+GGG	-	chr7_2:82005565-82005584	None:intergenic	35.0%
!	CATTCATTCCTTTTCCACTT+GGG	-	chr7_2:82005566-82005585	None:intergenic	35.0%
	TGGAAAAGGAATGAATGGAT+TGG	+	chr7_2:82005569-82005588	Msa1082050:three_prime_UTR	35.0%
!!!	TCATTTGTGGGTAGTTTTGT+AGG	+	chr7_2:82005788-82005807	Msa1082050:three_prime_UTR	35.0%
!!!	CATTTGTGGGTAGTTTTGTA+GGG	+	chr7_2:82005789-82005808	Msa1082050:three_prime_UTR	35.0%
	ATTAAACGTCTCGACACTAA+GGG	+	chr7_2:82005820-82005839	Msa1082050:three_prime_UTR	35.0%
!!	GATATCATTGGATTTTGGTG+CGG	-	chr7_2:82003719-82003738	None:intergenic	35.0%
	AAGCTTGAGGTAGATATCAT+TGG	-	chr7_2:82003731-82003750	None:intergenic	35.0%
	ATCAACCTAGAAAGTGATAG+TGG	-	chr7_2:82003953-82003972	None:intergenic	35.0%
	ACGATTATATACCTTTCCCT+TGG	-	chr7_2:82003984-82004003	None:intergenic	35.0%
	GCTTGAACTATTATCTAGAC+TGG	-	chr7_2:82004149-82004168	None:intergenic	35.0%
!	TGTTTTTCCAAACACTCGTA+TGG	+	chr7_2:82004217-82004236	Msa1082050:intron	35.0%
	ATAAGTACCATACGAGTGTT+TGG	-	chr7_2:82004227-82004246	None:intergenic	35.0%
!!	GGTTGATGAAGAGATAACAT+TGG	+	chr7_2:82004370-82004389	Msa1082050:intron	35.0%
	CAATTAAGGTAACTGCTCTA+AGG	+	chr7_2:82004520-82004539	Msa1082050:CDS	35.0%
!	ACTTTTATACCTATCTGCTG+CGG	+	chr7_2:82005084-82005103	Msa1082050:intron	35.0%
!	GCGGCAAATTAGATCAATTT+TGG	+	chr7_2:82005103-82005122	Msa1082050:intron	35.0%
!!	ATGTTTCAGGTTCTTCTTAG+AGG	+	chr7_2:82005268-82005287	Msa1082050:intron	35.0%
!!!	GATTTTTTTCCACGGACATA+GGG	-	chr7_2:82005364-82005383	None:intergenic	35.0%
!!!	TGATTTTTTTCCACGGACAT+AGG	-	chr7_2:82005365-82005384	None:intergenic	35.0%
!!!	CCTTTCGTGATTTTTTTCCA+CGG	-	chr7_2:82005372-82005391	None:intergenic	35.0%
!!!	TGTTTTGTTTTCTCCCTTTG+TGG	+	chr7_2:82005502-82005521	Msa1082050:three_prime_UTR	35.0%
	ATTGTTCACAACACCACAAA+GGG	-	chr7_2:82005518-82005537	None:intergenic	35.0%
	AATTGTTCACAACACCACAA+AGG	-	chr7_2:82005519-82005538	None:intergenic	35.0%
!	ATTCATTCCTTTTCCACTTG+GGG	-	chr7_2:82005565-82005584	None:intergenic	35.0%
!	CATTCATTCCTTTTCCACTT+GGG	-	chr7_2:82005566-82005585	None:intergenic	35.0%
	TGGAAAAGGAATGAATGGAT+TGG	+	chr7_2:82005569-82005588	Msa1082050:three_prime_UTR	35.0%
!!!	TCATTTGTGGGTAGTTTTGT+AGG	+	chr7_2:82005788-82005807	Msa1082050:three_prime_UTR	35.0%
!!!	CATTTGTGGGTAGTTTTGTA+GGG	+	chr7_2:82005789-82005808	Msa1082050:three_prime_UTR	35.0%
	ATTAAACGTCTCGACACTAA+GGG	+	chr7_2:82005820-82005839	Msa1082050:three_prime_UTR	35.0%
	AAGAAGAAGCTTCTTCACCA+TGG	+	chr7_2:82003553-82003572	Msa1082050:exon	40.0%
	ATACCTTAACGAGAAGCTTG+AGG	-	chr7_2:82003744-82003763	None:intergenic	40.0%
	TATACCGTTTCCTTGTTCGA+AGG	+	chr7_2:82003864-82003883	Msa1082050:CDS	40.0%
	TACTTTCAGTCCTTCGAACA+AGG	-	chr7_2:82003877-82003896	None:intergenic	40.0%
	TGCTCATGAAAAGCCTCTTA+AGG	-	chr7_2:82003916-82003935	None:intergenic	40.0%
!!	AACCTAGAAAGTGATAGTGG+TGG	-	chr7_2:82003950-82003969	None:intergenic	40.0%
!!	TAGGTTGATTCGTTACACCA+AGG	+	chr7_2:82003964-82003983	Msa1082050:CDS	40.0%
!!	AGGTTGATTCGTTACACCAA+GGG	+	chr7_2:82003965-82003984	Msa1082050:CDS	40.0%
!!	TCTTTCTTTCTGGTCTTAGG+AGG	+	chr7_2:82004437-82004456	Msa1082050:intron	40.0%
!!	CTTTCTTTCTGGTCTTAGGA+GGG	+	chr7_2:82004438-82004457	Msa1082050:intron	40.0%
	GGTAAGATTGCTGTAGTTGT+TGG	+	chr7_2:82004459-82004478	Msa1082050:CDS	40.0%
	AACCCTAATGTCATCTGTCA+CGG	-	chr7_2:82004487-82004506	None:intergenic	40.0%
	AGAGCAGTTACCTTAATTGC+AGG	-	chr7_2:82004519-82004538	None:intergenic	40.0%
!	TTGGATAACGCTGTTACTTG+CGG	+	chr7_2:82004938-82004957	Msa1082050:intron	40.0%
!	CAGGAAGTACACTAGATTTG+TGG	-	chr7_2:82005027-82005046	None:intergenic	40.0%
	CCGTGGAAAAAAATCACGAA+AGG	+	chr7_2:82005369-82005388	Msa1082050:CDS	40.0%
!	CCATTCATTCCTTTTCCACT+TGG	-	chr7_2:82005567-82005586	None:intergenic	40.0%
	CCAAGTGGAAAAGGAATGAA+TGG	+	chr7_2:82005564-82005583	Msa1082050:three_prime_UTR	40.0%
	CATTAAACGTCTCGACACTA+AGG	+	chr7_2:82005819-82005838	Msa1082050:three_prime_UTR	40.0%
	AAGAAGAAGCTTCTTCACCA+TGG	+	chr7_2:82003553-82003572	Msa1082050:exon	40.0%
	ATACCTTAACGAGAAGCTTG+AGG	-	chr7_2:82003744-82003763	None:intergenic	40.0%
	TATACCGTTTCCTTGTTCGA+AGG	+	chr7_2:82003864-82003883	Msa1082050:CDS	40.0%
	TACTTTCAGTCCTTCGAACA+AGG	-	chr7_2:82003877-82003896	None:intergenic	40.0%
	TGCTCATGAAAAGCCTCTTA+AGG	-	chr7_2:82003916-82003935	None:intergenic	40.0%
!!	AACCTAGAAAGTGATAGTGG+TGG	-	chr7_2:82003950-82003969	None:intergenic	40.0%
!!	TAGGTTGATTCGTTACACCA+AGG	+	chr7_2:82003964-82003983	Msa1082050:CDS	40.0%
!!	AGGTTGATTCGTTACACCAA+GGG	+	chr7_2:82003965-82003984	Msa1082050:CDS	40.0%
!!	TCTTTCTTTCTGGTCTTAGG+AGG	+	chr7_2:82004437-82004456	Msa1082050:intron	40.0%
!!	CTTTCTTTCTGGTCTTAGGA+GGG	+	chr7_2:82004438-82004457	Msa1082050:intron	40.0%
	GGTAAGATTGCTGTAGTTGT+TGG	+	chr7_2:82004459-82004478	Msa1082050:CDS	40.0%
	AACCCTAATGTCATCTGTCA+CGG	-	chr7_2:82004487-82004506	None:intergenic	40.0%
	AGAGCAGTTACCTTAATTGC+AGG	-	chr7_2:82004519-82004538	None:intergenic	40.0%
!	TTGGATAACGCTGTTACTTG+CGG	+	chr7_2:82004938-82004957	Msa1082050:intron	40.0%
!	CAGGAAGTACACTAGATTTG+TGG	-	chr7_2:82005027-82005046	None:intergenic	40.0%
	CCGTGGAAAAAAATCACGAA+AGG	+	chr7_2:82005369-82005388	Msa1082050:CDS	40.0%
!	CCATTCATTCCTTTTCCACT+TGG	-	chr7_2:82005567-82005586	None:intergenic	40.0%
	CCAAGTGGAAAAGGAATGAA+TGG	+	chr7_2:82005564-82005583	Msa1082050:three_prime_UTR	40.0%
	CATTAAACGTCTCGACACTA+AGG	+	chr7_2:82005819-82005838	Msa1082050:three_prime_UTR	40.0%
!!!	ATGGGGCTAGGGTTTTGTTT+AGG	-	chr7_2:82003510-82003529	None:intergenic	45.0%
!	GAAGCTTCTTCTTCTAGCTG+CGG	-	chr7_2:82003546-82003565	None:intergenic	45.0%
	AGAAAGAGGAGTGAGATGAG+AGG	-	chr7_2:82003638-82003657	None:intergenic	45.0%
!	TCCTCTTTCTCTCTTTTCGC+AGG	+	chr7_2:82003648-82003667	Msa1082050:intron	45.0%
!	CCTCTTTCTCTCTTTTCGCA+GGG	+	chr7_2:82003649-82003668	Msa1082050:intron	45.0%
!!	TTCGCAGGGTATCGATTTGA+AGG	+	chr7_2:82003663-82003682	Msa1082050:intron	45.0%
!	TGCGGTACGTTTAGTCTTCT+TGG	-	chr7_2:82003701-82003720	None:intergenic	45.0%
	CTACCTCAAGCTTCTCGTTA+AGG	+	chr7_2:82003738-82003757	Msa1082050:CDS	45.0%
	CAGTCCTTCGAACAAGGAAA+CGG	-	chr7_2:82003871-82003890	None:intergenic	45.0%
	AGCCACCACTATCACTTTCT+AGG	+	chr7_2:82003945-82003964	Msa1082050:CDS	45.0%
	GATTCGTTACACCAAGGGAA+AGG	+	chr7_2:82003970-82003989	Msa1082050:CDS	45.0%
	TCAAAACAGGCCCATGTCAT+AGG	+	chr7_2:82004274-82004293	Msa1082050:intron	45.0%
	TGCCGTGACAGATGACATTA+GGG	+	chr7_2:82004482-82004501	Msa1082050:CDS	45.0%
!!	TGCTCTAAGGTTCACCGAAA+AGG	+	chr7_2:82004533-82004552	Msa1082050:CDS	45.0%
!!	AATTCTAGCCCTGGCCTTTT+CGG	-	chr7_2:82004550-82004569	None:intergenic	45.0%
	CTAGAATTGAGAAGGCTGGT+GGG	+	chr7_2:82004562-82004581	Msa1082050:CDS	45.0%
	TAGAATTGAGAAGGCTGGTG+GGG	+	chr7_2:82004563-82004582	Msa1082050:CDS	45.0%
	TCTAAGAGCCAGCTGATCAA+AGG	-	chr7_2:82004598-82004617	None:intergenic	45.0%
	TGGCTCTTAGAGCTCCTTTA+GGG	+	chr7_2:82004607-82004626	Msa1082050:CDS	45.0%
!	TCTAATTTGCCGCAGCAGAT+AGG	-	chr7_2:82005096-82005115	None:intergenic	45.0%
	TTGAAGCCGCTAGAGGAAAA+AGG	+	chr7_2:82005392-82005411	Msa1082050:CDS	45.0%
!	GCTCTTCCTTTTTCCTCTAG+CGG	-	chr7_2:82005401-82005420	None:intergenic	45.0%
	AGAGGAAAAAGGAAGAGCAG+AGG	+	chr7_2:82005403-82005422	Msa1082050:CDS	45.0%
!!!	ATGGGGCTAGGGTTTTGTTT+AGG	-	chr7_2:82003510-82003529	None:intergenic	45.0%
!	GAAGCTTCTTCTTCTAGCTG+CGG	-	chr7_2:82003546-82003565	None:intergenic	45.0%
	AGAAAGAGGAGTGAGATGAG+AGG	-	chr7_2:82003638-82003657	None:intergenic	45.0%
!	TCCTCTTTCTCTCTTTTCGC+AGG	+	chr7_2:82003648-82003667	Msa1082050:intron	45.0%
!	CCTCTTTCTCTCTTTTCGCA+GGG	+	chr7_2:82003649-82003668	Msa1082050:intron	45.0%
!!	TTCGCAGGGTATCGATTTGA+AGG	+	chr7_2:82003663-82003682	Msa1082050:intron	45.0%
!	TGCGGTACGTTTAGTCTTCT+TGG	-	chr7_2:82003701-82003720	None:intergenic	45.0%
	CTACCTCAAGCTTCTCGTTA+AGG	+	chr7_2:82003738-82003757	Msa1082050:CDS	45.0%
	CAGTCCTTCGAACAAGGAAA+CGG	-	chr7_2:82003871-82003890	None:intergenic	45.0%
	AGCCACCACTATCACTTTCT+AGG	+	chr7_2:82003945-82003964	Msa1082050:CDS	45.0%
	GATTCGTTACACCAAGGGAA+AGG	+	chr7_2:82003970-82003989	Msa1082050:CDS	45.0%
	TCAAAACAGGCCCATGTCAT+AGG	+	chr7_2:82004274-82004293	Msa1082050:intron	45.0%
	TGCCGTGACAGATGACATTA+GGG	+	chr7_2:82004482-82004501	Msa1082050:CDS	45.0%
!!	TGCTCTAAGGTTCACCGAAA+AGG	+	chr7_2:82004533-82004552	Msa1082050:CDS	45.0%
!!	AATTCTAGCCCTGGCCTTTT+CGG	-	chr7_2:82004550-82004569	None:intergenic	45.0%
	CTAGAATTGAGAAGGCTGGT+GGG	+	chr7_2:82004562-82004581	Msa1082050:CDS	45.0%
	TAGAATTGAGAAGGCTGGTG+GGG	+	chr7_2:82004563-82004582	Msa1082050:CDS	45.0%
	TCTAAGAGCCAGCTGATCAA+AGG	-	chr7_2:82004598-82004617	None:intergenic	45.0%
	TGGCTCTTAGAGCTCCTTTA+GGG	+	chr7_2:82004607-82004626	Msa1082050:CDS	45.0%
!	TCTAATTTGCCGCAGCAGAT+AGG	-	chr7_2:82005096-82005115	None:intergenic	45.0%
	TTGAAGCCGCTAGAGGAAAA+AGG	+	chr7_2:82005392-82005411	Msa1082050:CDS	45.0%
!	GCTCTTCCTTTTTCCTCTAG+CGG	-	chr7_2:82005401-82005420	None:intergenic	45.0%
	AGAGGAAAAAGGAAGAGCAG+AGG	+	chr7_2:82005403-82005422	Msa1082050:CDS	45.0%
	GAACGAGAGAAATGGGGCTA+GGG	-	chr7_2:82003521-82003540	None:intergenic	50.0%
	CTAGCCCCATTTCTCTCGTT+CGG	+	chr7_2:82003520-82003539	Msa1082050:five_prime_UTR	50.0%
	TGTAGAGGAGGAACGTACCA+TGG	-	chr7_2:82003573-82003592	None:intergenic	50.0%
	TCCTCCTCTACAATCCCCAT+CGG	+	chr7_2:82003581-82003600	Msa1082050:intron	50.0%
!	TAAGAAATGGTCGCGCCGAT+GGG	-	chr7_2:82003599-82003618	None:intergenic	50.0%
	ATAAGAAATGGTCGCGCCGA+TGG	-	chr7_2:82003600-82003619	None:intergenic	50.0%
	GGAGTGAGATGAGAGGTTGT+CGG	-	chr7_2:82003631-82003650	None:intergenic	50.0%
	CCCTGCGAAAAGAGAGAAAG+AGG	-	chr7_2:82003652-82003671	None:intergenic	50.0%
!!	CAGGGTATCGATTTGAAGGC+AGG	+	chr7_2:82003667-82003686	Msa1082050:intron	50.0%
!!	GGTATCGATTTGAAGGCAGG+AGG	+	chr7_2:82003670-82003689	Msa1082050:CDS	50.0%
	GTGCCGTGACAGATGACATT+AGG	+	chr7_2:82004481-82004500	Msa1082050:CDS	50.0%
	TAAGGTTCACCGAAAAGGCC+AGG	+	chr7_2:82004538-82004557	Msa1082050:CDS	50.0%
	AAGGTTCACCGAAAAGGCCA+GGG	+	chr7_2:82004539-82004558	Msa1082050:CDS	50.0%
	AGCCTTCTCAATTCTAGCCC+TGG	-	chr7_2:82004559-82004578	None:intergenic	50.0%
	AGGGCTAGAATTGAGAAGGC+TGG	+	chr7_2:82004558-82004577	Msa1082050:CDS	50.0%
	GCTAGAATTGAGAAGGCTGG+TGG	+	chr7_2:82004561-82004580	Msa1082050:CDS	50.0%
!	CTGGCTCTTAGAGCTCCTTT+AGG	+	chr7_2:82004606-82004625	Msa1082050:CDS	50.0%
!!	AGCTCCTTTAGGGCAGAACA+CGG	+	chr7_2:82004617-82004636	Msa1082050:CDS	50.0%
	CATACCGTGTTCTGCCCTAA+AGG	-	chr7_2:82004624-82004643	None:intergenic	50.0%
!	ACAGCCTCACGGGCATTTTT+GGG	-	chr7_2:82005295-82005314	None:intergenic	50.0%
!	AAAGTGCTTGACAGCCTCAC+GGG	-	chr7_2:82005305-82005324	None:intergenic	50.0%
!	CAAAGTGCTTGACAGCCTCA+CGG	-	chr7_2:82005306-82005325	None:intergenic	50.0%
!	TAGGGCTTAGTGTTGCTGTG+TGG	-	chr7_2:82005346-82005365	None:intergenic	50.0%
	AACACTAAGCCCTATGTCCG+TGG	+	chr7_2:82005352-82005371	Msa1082050:CDS	50.0%
	TCCTTCTCCCCAAGTGGAAA+AGG	+	chr7_2:82005555-82005574	Msa1082050:three_prime_UTR	50.0%
!	TCCTTTTCCACTTGGGGAGA+AGG	-	chr7_2:82005559-82005578	None:intergenic	50.0%
	TTCTTGTGCGCTCGTAGTGT+TGG	+	chr7_2:82005674-82005693	Msa1082050:three_prime_UTR	50.0%
	TCTTGTGCGCTCGTAGTGTT+GGG	+	chr7_2:82005675-82005694	Msa1082050:three_prime_UTR	50.0%
	GAACGAGAGAAATGGGGCTA+GGG	-	chr7_2:82003521-82003540	None:intergenic	50.0%
	CTAGCCCCATTTCTCTCGTT+CGG	+	chr7_2:82003520-82003539	Msa1082050:five_prime_UTR	50.0%
	TGTAGAGGAGGAACGTACCA+TGG	-	chr7_2:82003573-82003592	None:intergenic	50.0%
	TCCTCCTCTACAATCCCCAT+CGG	+	chr7_2:82003581-82003600	Msa1082050:intron	50.0%
!	TAAGAAATGGTCGCGCCGAT+GGG	-	chr7_2:82003599-82003618	None:intergenic	50.0%
	ATAAGAAATGGTCGCGCCGA+TGG	-	chr7_2:82003600-82003619	None:intergenic	50.0%
	GGAGTGAGATGAGAGGTTGT+CGG	-	chr7_2:82003631-82003650	None:intergenic	50.0%
	CCCTGCGAAAAGAGAGAAAG+AGG	-	chr7_2:82003652-82003671	None:intergenic	50.0%
!!	CAGGGTATCGATTTGAAGGC+AGG	+	chr7_2:82003667-82003686	Msa1082050:intron	50.0%
!!	GGTATCGATTTGAAGGCAGG+AGG	+	chr7_2:82003670-82003689	Msa1082050:CDS	50.0%
	GTGCCGTGACAGATGACATT+AGG	+	chr7_2:82004481-82004500	Msa1082050:CDS	50.0%
	TAAGGTTCACCGAAAAGGCC+AGG	+	chr7_2:82004538-82004557	Msa1082050:CDS	50.0%
	AAGGTTCACCGAAAAGGCCA+GGG	+	chr7_2:82004539-82004558	Msa1082050:CDS	50.0%
	AGCCTTCTCAATTCTAGCCC+TGG	-	chr7_2:82004559-82004578	None:intergenic	50.0%
	AGGGCTAGAATTGAGAAGGC+TGG	+	chr7_2:82004558-82004577	Msa1082050:CDS	50.0%
	GCTAGAATTGAGAAGGCTGG+TGG	+	chr7_2:82004561-82004580	Msa1082050:CDS	50.0%
!	CTGGCTCTTAGAGCTCCTTT+AGG	+	chr7_2:82004606-82004625	Msa1082050:CDS	50.0%
!!	AGCTCCTTTAGGGCAGAACA+CGG	+	chr7_2:82004617-82004636	Msa1082050:CDS	50.0%
	CATACCGTGTTCTGCCCTAA+AGG	-	chr7_2:82004624-82004643	None:intergenic	50.0%
!	ACAGCCTCACGGGCATTTTT+GGG	-	chr7_2:82005295-82005314	None:intergenic	50.0%
!	AAAGTGCTTGACAGCCTCAC+GGG	-	chr7_2:82005305-82005324	None:intergenic	50.0%
!	CAAAGTGCTTGACAGCCTCA+CGG	-	chr7_2:82005306-82005325	None:intergenic	50.0%
!	TAGGGCTTAGTGTTGCTGTG+TGG	-	chr7_2:82005346-82005365	None:intergenic	50.0%
	AACACTAAGCCCTATGTCCG+TGG	+	chr7_2:82005352-82005371	Msa1082050:CDS	50.0%
	TCCTTCTCCCCAAGTGGAAA+AGG	+	chr7_2:82005555-82005574	Msa1082050:three_prime_UTR	50.0%
!	TCCTTTTCCACTTGGGGAGA+AGG	-	chr7_2:82005559-82005578	None:intergenic	50.0%
	TTCTTGTGCGCTCGTAGTGT+TGG	+	chr7_2:82005674-82005693	Msa1082050:three_prime_UTR	50.0%
	TCTTGTGCGCTCGTAGTGTT+GGG	+	chr7_2:82005675-82005694	Msa1082050:three_prime_UTR	50.0%
	CGAACGAGAGAAATGGGGCT+AGG	-	chr7_2:82003522-82003541	None:intergenic	55.0%
	TGCGGCCGAACGAGAGAAAT+GGG	-	chr7_2:82003528-82003547	None:intergenic	55.0%
!	AAGAAATGGTCGCGCCGATG+GGG	-	chr7_2:82003598-82003617	None:intergenic	55.0%
	GGCCAGGGCTAGAATTGAGA+AGG	+	chr7_2:82004554-82004573	Msa1082050:CDS	55.0%
	GTGCCTCACCTTTGATCAGC+TGG	+	chr7_2:82004587-82004606	Msa1082050:CDS	55.0%
	GAGCCAGCTGATCAAAGGTG+AGG	-	chr7_2:82004593-82004612	None:intergenic	55.0%
	AGGTCCCAAAAATGCCCGTG+AGG	+	chr7_2:82005288-82005307	Msa1082050:CDS	55.0%
!	GACAGCCTCACGGGCATTTT+TGG	-	chr7_2:82005296-82005315	None:intergenic	55.0%
	CGTGAGGCTGTCAAGCACTT+TGG	+	chr7_2:82005304-82005323	Msa1082050:CDS	55.0%
	AAGCACTTTGGACGAGCTCC+TGG	+	chr7_2:82005316-82005335	Msa1082050:CDS	55.0%
	CGAAAGGTTGAAGCCGCTAG+AGG	+	chr7_2:82005385-82005404	Msa1082050:CDS	55.0%
	TTAGCGTCCTTCTCCCCAAG+TGG	+	chr7_2:82005549-82005568	Msa1082050:three_prime_UTR	55.0%
!	TGCGCTCGTAGTGTTGGGAA+GGG	+	chr7_2:82005680-82005699	Msa1082050:three_prime_UTR	55.0%
	CGAACGAGAGAAATGGGGCT+AGG	-	chr7_2:82003522-82003541	None:intergenic	55.0%
	TGCGGCCGAACGAGAGAAAT+GGG	-	chr7_2:82003528-82003547	None:intergenic	55.0%
!	AAGAAATGGTCGCGCCGATG+GGG	-	chr7_2:82003598-82003617	None:intergenic	55.0%
	GGCCAGGGCTAGAATTGAGA+AGG	+	chr7_2:82004554-82004573	Msa1082050:CDS	55.0%
	GTGCCTCACCTTTGATCAGC+TGG	+	chr7_2:82004587-82004606	Msa1082050:CDS	55.0%
	GAGCCAGCTGATCAAAGGTG+AGG	-	chr7_2:82004593-82004612	None:intergenic	55.0%
	AGGTCCCAAAAATGCCCGTG+AGG	+	chr7_2:82005288-82005307	Msa1082050:CDS	55.0%
!	GACAGCCTCACGGGCATTTT+TGG	-	chr7_2:82005296-82005315	None:intergenic	55.0%
	CGTGAGGCTGTCAAGCACTT+TGG	+	chr7_2:82005304-82005323	Msa1082050:CDS	55.0%
	AAGCACTTTGGACGAGCTCC+TGG	+	chr7_2:82005316-82005335	Msa1082050:CDS	55.0%
	CGAAAGGTTGAAGCCGCTAG+AGG	+	chr7_2:82005385-82005404	Msa1082050:CDS	55.0%
	TTAGCGTCCTTCTCCCCAAG+TGG	+	chr7_2:82005549-82005568	Msa1082050:three_prime_UTR	55.0%
!	TGCGCTCGTAGTGTTGGGAA+GGG	+	chr7_2:82005680-82005699	Msa1082050:three_prime_UTR	55.0%
	GCGGCCGAACGAGAGAAATG+GGG	-	chr7_2:82003527-82003546	None:intergenic	60.0%
	CTGCGGCCGAACGAGAGAAA+TGG	-	chr7_2:82003529-82003548	None:intergenic	60.0%
	GCCGATGGGGATTGTAGAGG+AGG	-	chr7_2:82003585-82003604	None:intergenic	60.0%
!	GTGTTGCTGTGTGGCACACC+AGG	-	chr7_2:82005337-82005356	None:intergenic	60.0%
!	GTGCGCTCGTAGTGTTGGGA+AGG	+	chr7_2:82005679-82005698	Msa1082050:three_prime_UTR	60.0%
!	GCGCTCGTAGTGTTGGGAAG+GGG	+	chr7_2:82005681-82005700	Msa1082050:three_prime_UTR	60.0%
!	CGCTCGTAGTGTTGGGAAGG+GGG	+	chr7_2:82005682-82005701	Msa1082050:three_prime_UTR	60.0%
	GCGGCCGAACGAGAGAAATG+GGG	-	chr7_2:82003527-82003546	None:intergenic	60.0%
	CTGCGGCCGAACGAGAGAAA+TGG	-	chr7_2:82003529-82003548	None:intergenic	60.0%
	GCCGATGGGGATTGTAGAGG+AGG	-	chr7_2:82003585-82003604	None:intergenic	60.0%
!	GTGTTGCTGTGTGGCACACC+AGG	-	chr7_2:82005337-82005356	None:intergenic	60.0%
!	GTGCGCTCGTAGTGTTGGGA+AGG	+	chr7_2:82005679-82005698	Msa1082050:three_prime_UTR	60.0%
!	GCGCTCGTAGTGTTGGGAAG+GGG	+	chr7_2:82005681-82005700	Msa1082050:three_prime_UTR	60.0%
!	CGCTCGTAGTGTTGGGAAGG+GGG	+	chr7_2:82005682-82005701	Msa1082050:three_prime_UTR	60.0%
!	CGCGCCGATGGGGATTGTAG+AGG	-	chr7_2:82003588-82003607	None:intergenic	65.0%
!	CGCGCCGATGGGGATTGTAG+AGG	-	chr7_2:82003588-82003607	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr7_2	gene	82003495	82005853	82003495	ID=Msa1082050;Name=Msa1082050
chr7_2	mRNA	82003495	82005853	82003495	ID=Msa1082050-mRNA-1;Parent=Msa1082050;Name=Msa1082050-mRNA-1;_AED=0.02;_eAED=0.02;_QI=77\|1\|1\|1\|1\|1\|5\|415\|188
chr7_2	exon	82003495	82003574	82003495	ID=Msa1082050-mRNA-1:exon:21128;Parent=Msa1082050-mRNA-1
chr7_2	exon	82003670	82003759	82003670	ID=Msa1082050-mRNA-1:exon:21129;Parent=Msa1082050-mRNA-1
chr7_2	exon	82003863	82003991	82003863	ID=Msa1082050-mRNA-1:exon:21130;Parent=Msa1082050-mRNA-1
chr7_2	exon	82004456	82004638	82004456	ID=Msa1082050-mRNA-1:exon:21131;Parent=Msa1082050-mRNA-1
chr7_2	exon	82005277	82005853	82005277	ID=Msa1082050-mRNA-1:exon:21132;Parent=Msa1082050-mRNA-1
chr7_2	five_prime_UTR	82003495	82003571	82003495	ID=Msa1082050-mRNA-1:five_prime_utr;Parent=Msa1082050-mRNA-1
chr7_2	CDS	82003572	82003574	82003572	ID=Msa1082050-mRNA-1:cds;Parent=Msa1082050-mRNA-1
chr7_2	CDS	82003670	82003759	82003670	ID=Msa1082050-mRNA-1:cds;Parent=Msa1082050-mRNA-1
chr7_2	CDS	82003863	82003991	82003863	ID=Msa1082050-mRNA-1:cds;Parent=Msa1082050-mRNA-1
chr7_2	CDS	82004456	82004638	82004456	ID=Msa1082050-mRNA-1:cds;Parent=Msa1082050-mRNA-1
chr7_2	CDS	82005277	82005438	82005277	ID=Msa1082050-mRNA-1:cds;Parent=Msa1082050-mRNA-1
chr7_2	three_prime_UTR	82005439	82005853	82005439	ID=Msa1082050-mRNA-1:three_prime_utr;Parent=Msa1082050-mRNA-1

Gene Sequence

>Msa1082050

ATGGGTATCGATTTGAAGGCAGGAGGTAAGTCCAAGAAGACTAAACGTACCGCACCAAAATCCAATGATATCTACCTCAAGCTTCTCGTTAAGCTATACCGTTTCCTTGTTCGAAGGACTGAAAGTAATTTCAATAAGGTTATCCTTAAGAGGCTTTTCATGAGCAAAGTCAACAAGCCACCACTATCACTTTCTAGGTTGATTCGTTACACCAAGGGAAAGGAGGGTAAGATTGCTGTAGTTGTTGGTGCCGTGACAGATGACATTAGGGTTTATGAAGTACCTGCAATTAAGGTAACTGCTCTAAGGTTCACCGAAAAGGCCAGGGCTAGAATTGAGAAGGCTGGTGGGGAGTGCCTCACCTTTGATCAGCTGGCTCTTAGAGCTCCTTTAGGGCAGAACACGGTTCTTCTTAGAGGTCCCAAAAATGCCCGTGAGGCTGTCAAGCACTTTGGACGAGCTCCTGGTGTGCCACACAGCAACACTAAGCCCTATGTCCGTGGAAAAAAATCACGAAAGGTTGAAGCCGCTAGAGGAAAAAGGAAGAGCAGAGGCTTTAAAGTTTGA

Protein sequence

>Msa1082050

MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTESNFNKVILKRLFMSKVNKPPLSLSRLIRYTKGKEGKIAVVVGAVTDDIRVYEVPAIKVTALRFTEKARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGRAPGVPHSNTKPYVRGKKSRKVEAARGKRKSRGFKV*