Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1450100 | sp|Q38826|IAA8_ARATH | 44.841 | 252 | 95 | 6 | 6 | 246 | 21 | 239 | 1.14e-55 | 184 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1450100 | G7IUP2 | 94.332 | 247 | 12 | 2 | 1 | 246 | 1 | 246 | 7.25e-167 | 473 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1450100 | TR | AUX/IAA |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa1450100 | 0.873856 | 1.063060e-67 | -8.615850e-47 |
| Msa0001940 | Msa1450100 | 0.818216 | 2.201021e-52 | -8.615850e-47 |
| Msa0002580 | Msa1450100 | 0.815942 | 7.136903e-52 | -8.615850e-47 |
| Msa0017950 | Msa1450100 | 0.820462 | 6.773020e-53 | -8.615850e-47 |
| Msa0024550 | Msa1450100 | 0.834908 | 2.283201e-56 | -8.615850e-47 |
| Msa0034810 | Msa1450100 | 0.818656 | 1.749571e-52 | -8.615850e-47 |
| Msa0074600 | Msa1450100 | 0.801781 | 7.658693e-49 | -8.615850e-47 |
| Msa0094780 | Msa1450100 | 0.804824 | 1.794866e-49 | -8.615850e-47 |
| Msa0098040 | Msa1450100 | 0.823429 | 1.392103e-53 | -8.615850e-47 |
| Msa0108410 | Msa1450100 | 0.807879 | 4.074978e-50 | -8.615850e-47 |
| Msa0120400 | Msa1450100 | 0.832482 | 9.219022e-56 | -8.615850e-47 |
| Msa1355450 | Msa1450100 | 0.806226 | 9.117218e-50 | -8.615850e-47 |
| Msa1366340 | Msa1450100 | 0.825676 | 4.117645e-54 | -8.615850e-47 |
| Msa1397740 | Msa1450100 | 0.824088 | 9.755116e-54 | -8.615850e-47 |
| Msa1414640 | Msa1450100 | 0.815125 | 1.084850e-51 | -8.615850e-47 |
| Msa1415540 | Msa1450100 | 0.810410 | 1.168820e-50 | -8.615850e-47 |
| Msa1432500 | Msa1450100 | 0.801991 | 6.933092e-49 | -8.615850e-47 |
| Msa1433810 | Msa1450100 | 0.804278 | 2.332548e-49 | -8.615850e-47 |
| Msa1440960 | Msa1450100 | 0.823677 | 1.218023e-53 | -8.615850e-47 |
| Msa0611210 | Msa1450100 | 0.802577 | 5.253042e-49 | -8.615850e-47 |
| Msa0626450 | Msa1450100 | 0.835509 | 1.610268e-56 | -8.615850e-47 |
| Msa0626490 | Msa1450100 | 0.829850 | 4.085850e-55 | -8.615850e-47 |
| Msa0664600 | Msa1450100 | 0.832042 | 1.184675e-55 | -8.615850e-47 |
| Msa0664660 | Msa1450100 | 0.805906 | 1.064401e-49 | -8.615850e-47 |
| Msa0664710 | Msa1450100 | 0.814112 | 1.818095e-51 | -8.615850e-47 |
| Msa0670100 | Msa1450100 | 0.809303 | 2.022615e-50 | -8.615850e-47 |
| Msa0733390 | Msa1450100 | 0.803887 | 2.812987e-49 | -8.615850e-47 |
| Msa0741220 | Msa1450100 | 0.841832 | 3.741507e-58 | -8.615850e-47 |
| Msa0741650 | Msa1450100 | 0.814537 | 1.465039e-51 | -8.615850e-47 |
| Msa0769180 | Msa1450100 | 0.808308 | 3.300925e-50 | -8.615850e-47 |
| Msa0780270 | Msa1450100 | 0.804927 | 1.707886e-49 | -8.615850e-47 |
| Msa0792370 | Msa1450100 | 0.806195 | 9.253756e-50 | -8.615850e-47 |
| Msa0795870 | Msa1450100 | 0.834510 | 2.875536e-56 | -8.615850e-47 |
| Msa0829300 | Msa1450100 | 0.838739 | 2.404229e-57 | -8.615850e-47 |
| Msa0829330 | Msa1450100 | 0.834343 | 3.166342e-56 | -8.615850e-47 |
| Msa0833650 | Msa1450100 | 0.836132 | 1.119261e-56 | -8.615850e-47 |
| Msa0835490 | Msa1450100 | 0.822151 | 2.761060e-53 | -8.615850e-47 |
| Msa0126040 | Msa1450100 | 0.805328 | 1.407922e-49 | -8.615850e-47 |
| Msa0129940 | Msa1450100 | 0.806879 | 6.639648e-50 | -8.615850e-47 |
| Msa0131900 | Msa1450100 | 0.806336 | 8.641785e-50 | -8.615850e-47 |
| Msa0164330 | Msa1450100 | 0.824958 | 6.086329e-54 | -8.615850e-47 |
| Msa0173690 | Msa1450100 | 0.800811 | 1.209865e-48 | -8.615850e-47 |
| Msa0174450 | Msa1450100 | 0.809715 | 1.650052e-50 | -8.615850e-47 |
| Msa0175730 | Msa1450100 | 0.827475 | 1.532602e-54 | -8.615850e-47 |
| Msa0191020 | Msa1450100 | 0.809407 | 1.921828e-50 | -8.615850e-47 |
| Msa0208140 | Msa1450100 | 0.806778 | 6.973603e-50 | -8.615850e-47 |
| Msa0211030 | Msa1450100 | 0.804426 | 2.172836e-49 | -8.615850e-47 |
| Msa0218810 | Msa1450100 | 0.801046 | 1.083121e-48 | -8.615850e-47 |
| Msa0221000 | Msa1450100 | 0.804307 | 2.299867e-49 | -8.615850e-47 |
| Msa0224780 | Msa1450100 | 0.801842 | 7.439194e-49 | -8.615850e-47 |
| Msa0225100 | Msa1450100 | 0.912912 | 1.130308e-83 | -8.615850e-47 |
| Msa0225860 | Msa1450100 | 0.838330 | 3.066638e-57 | -8.615850e-47 |
| Msa0233320 | Msa1450100 | 0.811517 | 6.729780e-51 | -8.615850e-47 |
| Msa1225860 | Msa1450100 | -0.825402 | 4.780685e-54 | -8.615850e-47 |
| Msa1228200 | Msa1450100 | 0.814674 | 1.365990e-51 | -8.615850e-47 |
| Msa1236410 | Msa1450100 | 0.803986 | 2.682680e-49 | -8.615850e-47 |
| Msa1238820 | Msa1450100 | 0.808030 | 3.784170e-50 | -8.615850e-47 |
| Msa1265650 | Msa1450100 | 0.815982 | 6.992296e-52 | -8.615850e-47 |
| Msa1267770 | Msa1450100 | 0.823052 | 1.704460e-53 | -8.615850e-47 |
| Msa1277220 | Msa1450100 | 0.834866 | 2.338883e-56 | -8.615850e-47 |
| Msa1297230 | Msa1450100 | 0.806199 | 9.236291e-50 | -8.615850e-47 |
| Msa1303560 | Msa1450100 | 0.807248 | 5.546324e-50 | -8.615850e-47 |
| Msa1303650 | Msa1450100 | 0.809473 | 1.860035e-50 | -8.615850e-47 |
| Msa1315590 | Msa1450100 | 0.800740 | 1.250413e-48 | -8.615850e-47 |
| Msa1320670 | Msa1450100 | 0.807942 | 3.951200e-50 | -8.615850e-47 |
| Msa1328710 | Msa1450100 | 0.810296 | 1.237046e-50 | -8.615850e-47 |
| Msa1343430 | Msa1450100 | 0.810412 | 1.167770e-50 | -8.615850e-47 |
| Msa0367870 | Msa1450100 | 0.816714 | 4.795416e-52 | -8.615850e-47 |
| Msa0369790 | Msa1450100 | 0.812843 | 3.457218e-51 | -8.615850e-47 |
| Msa0376630 | Msa1450100 | 0.806409 | 8.343320e-50 | -8.615850e-47 |
| Msa0378720 | Msa1450100 | 0.827784 | 1.291945e-54 | -8.615850e-47 |
| Msa0380620 | Msa1450100 | 0.800940 | 1.138681e-48 | -8.615850e-47 |
| Msa0403640 | Msa1450100 | 0.819917 | 9.028662e-53 | -8.615850e-47 |
| Msa0425170 | Msa1450100 | 0.814534 | 1.466816e-51 | -8.615850e-47 |
| Msa0428370 | Msa1450100 | 0.811289 | 7.542691e-51 | -8.615850e-47 |
| Msa0436910 | Msa1450100 | 0.821532 | 3.840921e-53 | -8.615850e-47 |
| Msa0464000 | Msa1450100 | 0.808036 | 3.773285e-50 | -8.615850e-47 |
| Msa0464680 | Msa1450100 | 0.809482 | 1.851412e-50 | -8.615850e-47 |
| Msa0472950 | Msa1450100 | 0.807233 | 5.585996e-50 | -8.615850e-47 |
| Msa0474730 | Msa1450100 | 0.832011 | 1.205688e-55 | -8.615850e-47 |
| Msa1019000 | Msa1450100 | 0.818330 | 2.073904e-52 | -8.615850e-47 |
| Msa1019150 | Msa1450100 | 0.825537 | 4.441953e-54 | -8.615850e-47 |
| Msa1019430 | Msa1450100 | 0.827515 | 1.499527e-54 | -8.615850e-47 |
| Msa1019470 | Msa1450100 | 0.832872 | 7.377709e-56 | -8.615850e-47 |
| Msa1023500 | Msa1450100 | 0.801923 | 7.158897e-49 | -8.615850e-47 |
| Msa1044680 | Msa1450100 | 0.812956 | 3.265611e-51 | -8.615850e-47 |
| Msa1081330 | Msa1450100 | 0.801824 | 7.503558e-49 | -8.615850e-47 |
| Msa0243600 | Msa1450100 | 0.813444 | 2.552380e-51 | -8.615850e-47 |
| Msa0244640 | Msa1450100 | 0.871093 | 8.881590e-67 | -8.615850e-47 |
| Msa0244940 | Msa1450100 | 0.824035 | 1.004059e-53 | -8.615850e-47 |
| Msa0258310 | Msa1450100 | 0.803753 | 2.998872e-49 | -8.615850e-47 |
| Msa0261340 | Msa1450100 | 0.809764 | 1.610447e-50 | -8.615850e-47 |
| Msa0265850 | Msa1450100 | 0.832168 | 1.102575e-55 | -8.615850e-47 |
| Msa0266180 | Msa1450100 | 0.869897 | 2.194302e-66 | -8.615850e-47 |
| Msa0270340 | Msa1450100 | 0.810948 | 8.941466e-51 | -8.615850e-47 |
| Msa0276740 | Msa1450100 | 0.801643 | 8.174804e-49 | -8.615850e-47 |
| Msa0283330 | Msa1450100 | 0.853425 | 2.410107e-61 | -8.615850e-47 |
| Msa0287740 | Msa1450100 | 0.927749 | 7.614431e-92 | -8.615850e-47 |
| Msa0287780 | Msa1450100 | 0.819679 | 1.023528e-52 | -8.615850e-47 |
| Msa0290720 | Msa1450100 | 0.817533 | 3.138826e-52 | -8.615850e-47 |
| Msa0297790 | Msa1450100 | 0.823533 | 1.315930e-53 | -8.615850e-47 |
| Msa0300270 | Msa1450100 | 0.812845 | 3.453828e-51 | -8.615850e-47 |
| Msa0300320 | Msa1450100 | 0.808922 | 2.440417e-50 | -8.615850e-47 |
| Msa0307670 | Msa1450100 | 0.809210 | 2.117569e-50 | -8.615850e-47 |
| Msa0321620 | Msa1450100 | 0.823485 | 1.350823e-53 | -8.615850e-47 |
| Msa0321650 | Msa1450100 | 0.813488 | 2.495405e-51 | -8.615850e-47 |
| Msa0337700 | Msa1450100 | 0.821164 | 4.671221e-53 | -8.615850e-47 |
| Msa0363200 | Msa1450100 | 0.807282 | 5.453757e-50 | -8.615850e-47 |
| Msa1132840 | Msa1450100 | 0.834873 | 2.329573e-56 | -8.615850e-47 |
| Msa1140220 | Msa1450100 | 0.806175 | 9.343893e-50 | -8.615850e-47 |
| Msa1147740 | Msa1450100 | 0.842101 | 3.175073e-58 | -8.615850e-47 |
| Msa1155170 | Msa1450100 | -0.844661 | 6.583256e-59 | -8.615850e-47 |
| Msa1186020 | Msa1450100 | 0.808383 | 3.181529e-50 | -8.615850e-47 |
| Msa1199570 | Msa1450100 | 0.809485 | 1.848528e-50 | -8.615850e-47 |
| Msa1208950 | Msa1450100 | 0.803950 | 2.729969e-49 | -8.615850e-47 |
| Msa0483100 | Msa1450100 | 0.811030 | 8.582363e-51 | -8.615850e-47 |
| Msa0509550 | Msa1450100 | 0.802609 | 5.171825e-49 | -8.615850e-47 |
| Msa0519830 | Msa1450100 | 0.805159 | 1.527181e-49 | -8.615850e-47 |
| Msa0528570 | Msa1450100 | 0.821964 | 3.051363e-53 | -8.615850e-47 |
| Msa0530050 | Msa1450100 | 0.804781 | 1.831756e-49 | -8.615850e-47 |
| Msa0548470 | Msa1450100 | 0.823157 | 1.611496e-53 | -8.615850e-47 |
| Msa0557460 | Msa1450100 | 0.831099 | 2.022707e-55 | -8.615850e-47 |
| Msa0579660 | Msa1450100 | 0.800852 | 1.186301e-48 | -8.615850e-47 |
| Msa0580370 | Msa1450100 | 0.832355 | 9.909083e-56 | -8.615850e-47 |
| Msa0581470 | Msa1450100 | 0.820887 | 5.408657e-53 | -8.615850e-47 |
| Msa0583360 | Msa1450100 | -0.821437 | 4.040569e-53 | -8.615850e-47 |
| Msa0585560 | Msa1450100 | 0.802260 | 6.104560e-49 | -8.615850e-47 |
| Msa0586750 | Msa1450100 | 0.809541 | 1.798240e-50 | -8.615850e-47 |
| Msa0587620 | Msa1450100 | 0.802670 | 5.025296e-49 | -8.615850e-47 |
| Msa0589510 | Msa1450100 | 0.802843 | 4.628832e-49 | -8.615850e-47 |
| Msa0597270 | Msa1450100 | 0.805456 | 1.323603e-49 | -8.615850e-47 |
| Msa0601950 | Msa1450100 | 0.808981 | 2.371238e-50 | -8.615850e-47 |
| Msa0861600 | Msa1450100 | 0.801816 | 7.530460e-49 | -8.615850e-47 |
| Msa0861850 | Msa1450100 | 0.800152 | 1.648020e-48 | -8.615850e-47 |
| Msa0871880 | Msa1450100 | 0.836554 | 8.742130e-57 | -8.615850e-47 |
| Msa0905240 | Msa1450100 | 0.818198 | 2.221702e-52 | -8.615850e-47 |
| Msa0937230 | Msa1450100 | 0.836710 | 7.975886e-57 | -8.615850e-47 |
| Msa0961610 | Msa1450100 | 0.804125 | 2.509579e-49 | -8.615850e-47 |
| Msa0967380 | Msa1450100 | 0.827757 | 1.311436e-54 | -8.615850e-47 |
| Msa0967870 | Msa1450100 | 0.942175 | 1.143822e-101 | -8.615850e-47 |
| Msa0974520 | Msa1450100 | 0.830343 | 3.097341e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1450100 | MtrunA17_Chr2g0331411 | 94.332 | 247 | 12 | 2 | 1 | 246 | 1 | 246 | 1.40e-170 | 473 |
| Msa1450100 | MtrunA17_Chr8g0390281 | 48.249 | 257 | 77 | 11 | 1 | 246 | 1 | 212 | 1.62e-58 | 187 |
| Msa1450100 | MtrunA17_Chr5g0411501 | 40.502 | 279 | 94 | 10 | 1 | 246 | 16 | 255 | 3.47e-51 | 170 |
| Msa1450100 | MtrunA17_Chr8g0366881 | 42.857 | 259 | 101 | 9 | 6 | 246 | 39 | 268 | 1.20e-50 | 169 |
| Msa1450100 | MtrunA17_Chr6g0486121 | 46.288 | 229 | 57 | 9 | 20 | 246 | 10 | 174 | 3.49e-45 | 152 |
| Msa1450100 | MtrunA17_Chr5g0428141 | 42.164 | 268 | 106 | 12 | 2 | 246 | 29 | 270 | 4.04e-43 | 149 |
| Msa1450100 | MtrunA17_Chr1g0190711 | 35.833 | 240 | 82 | 8 | 23 | 255 | 13 | 187 | 1.27e-26 | 103 |
| Msa1450100 | MtrunA17_Chr1g0184791 | 60.000 | 85 | 31 | 1 | 167 | 248 | 84 | 168 | 2.35e-24 | 97.8 |
| Msa1450100 | MtrunA17_Chr1g0187921 | 53.763 | 93 | 39 | 2 | 167 | 255 | 78 | 170 | 5.83e-24 | 96.7 |
| Msa1450100 | MtrunA17_Chr1g0166011 | 45.000 | 120 | 48 | 4 | 128 | 241 | 17 | 124 | 6.97e-24 | 95.1 |
| Msa1450100 | MtrunA17_Chr7g0260641 | 59.036 | 83 | 31 | 2 | 167 | 248 | 94 | 174 | 5.32e-23 | 94.4 |
| Msa1450100 | MtrunA17_Chr1g0184801 | 54.217 | 83 | 28 | 2 | 161 | 243 | 73 | 145 | 3.07e-22 | 91.3 |
| Msa1450100 | MtrunA17_Chr1g0187961 | 53.012 | 83 | 26 | 3 | 166 | 248 | 57 | 126 | 1.33e-20 | 86.3 |
| Msa1450100 | MtrunA17_Chr7g0260621 | 43.689 | 103 | 47 | 2 | 143 | 243 | 52 | 145 | 1.34e-20 | 86.7 |
| Msa1450100 | MtrunA17_Chr2g0330951 | 39.216 | 102 | 42 | 3 | 157 | 241 | 84 | 182 | 1.47e-12 | 65.9 |
| Msa1450100 | MtrunA17_Chr8g0340731 | 41.379 | 87 | 37 | 2 | 169 | 241 | 104 | 190 | 1.84e-12 | 65.5 |
| Msa1450100 | MtrunA17_Chr4g0004181 | 49.383 | 81 | 27 | 2 | 170 | 250 | 52 | 118 | 1.72e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1450100 | AT2G22670.5 | 44.841 | 252 | 95 | 6 | 6 | 246 | 21 | 239 | 1.16e-56 | 184 |
| Msa1450100 | AT2G22670.2 | 44.841 | 252 | 95 | 6 | 6 | 246 | 21 | 239 | 1.16e-56 | 184 |
| Msa1450100 | AT2G22670.3 | 44.841 | 252 | 95 | 6 | 6 | 246 | 21 | 239 | 1.16e-56 | 184 |
| Msa1450100 | AT2G22670.1 | 44.841 | 252 | 95 | 6 | 6 | 246 | 21 | 239 | 1.16e-56 | 184 |
| Msa1450100 | AT2G22670.4 | 44.841 | 252 | 95 | 6 | 6 | 246 | 38 | 256 | 1.51e-56 | 184 |
| Msa1450100 | AT4G29080.1 | 46.415 | 265 | 81 | 11 | 1 | 246 | 3 | 225 | 4.58e-56 | 182 |
| Msa1450100 | AT5G65670.2 | 40.784 | 255 | 106 | 9 | 6 | 246 | 33 | 256 | 2.55e-44 | 152 |
| Msa1450100 | AT5G65670.1 | 40.784 | 255 | 106 | 9 | 6 | 246 | 33 | 256 | 2.58e-44 | 152 |
| Msa1450100 | AT4G14550.3 | 35.556 | 225 | 67 | 5 | 25 | 246 | 1 | 150 | 7.45e-30 | 111 |
| Msa1450100 | AT4G14550.4 | 35.556 | 225 | 67 | 5 | 25 | 246 | 1 | 150 | 1.78e-29 | 110 |
| Msa1450100 | AT4G14550.1 | 35.556 | 225 | 67 | 5 | 25 | 246 | 1 | 150 | 2.24e-29 | 110 |
| Msa1450100 | AT4G14550.2 | 35.556 | 225 | 67 | 5 | 25 | 246 | 1 | 150 | 3.22e-29 | 110 |
| Msa1450100 | AT3G04730.1 | 43.333 | 150 | 65 | 4 | 115 | 248 | 15 | 160 | 1.14e-25 | 101 |
| Msa1450100 | AT3G23050.3 | 33.043 | 230 | 75 | 6 | 25 | 246 | 6 | 164 | 5.03e-24 | 95.1 |
| Msa1450100 | AT3G23050.2 | 32.645 | 242 | 81 | 7 | 25 | 255 | 6 | 176 | 7.19e-24 | 95.9 |
| Msa1450100 | AT1G04250.1 | 33.624 | 229 | 66 | 6 | 22 | 246 | 4 | 150 | 9.71e-24 | 96.3 |
| Msa1450100 | AT3G23050.1 | 32.645 | 242 | 81 | 7 | 25 | 255 | 6 | 176 | 2.37e-23 | 95.5 |
| Msa1450100 | AT1G04240.1 | 59.211 | 76 | 25 | 2 | 166 | 241 | 58 | 127 | 2.07e-22 | 91.7 |
| Msa1450100 | AT5G43700.1 | 50.000 | 102 | 40 | 4 | 140 | 241 | 33 | 123 | 1.11e-21 | 89.7 |
| Msa1450100 | AT1G04240.2 | 59.211 | 76 | 25 | 2 | 166 | 241 | 158 | 227 | 1.39e-21 | 91.7 |
| Msa1450100 | AT3G23030.1 | 49.057 | 106 | 34 | 4 | 139 | 241 | 24 | 112 | 2.26e-20 | 85.9 |
| Msa1450100 | AT3G23030.2 | 49.057 | 106 | 34 | 4 | 139 | 241 | 111 | 199 | 9.84e-20 | 86.3 |
| Msa1450100 | AT1G52830.1 | 43.158 | 95 | 43 | 2 | 152 | 246 | 50 | 133 | 1.72e-18 | 81.3 |
| Msa1450100 | AT4G14560.1 | 52.809 | 89 | 26 | 2 | 158 | 246 | 41 | 113 | 1.30e-15 | 72.8 |
| Msa1450100 | AT3G15540.1 | 49.351 | 77 | 31 | 2 | 165 | 241 | 63 | 131 | 1.46e-15 | 73.6 |
| Msa1450100 | AT1G15580.1 | 45.000 | 80 | 29 | 2 | 167 | 245 | 48 | 113 | 1.60e-15 | 72.4 |
| Msa1450100 | AT3G16500.2 | 33.577 | 137 | 70 | 3 | 126 | 241 | 50 | 186 | 6.50e-14 | 70.1 |
| Msa1450100 | AT3G16500.1 | 33.577 | 137 | 70 | 3 | 126 | 241 | 50 | 186 | 7.94e-14 | 70.1 |
| Msa1450100 | AT4G28640.1 | 37.000 | 100 | 48 | 3 | 157 | 241 | 72 | 171 | 3.63e-12 | 65.1 |
| Msa1450100 | AT4G28640.3 | 37.000 | 100 | 48 | 3 | 157 | 241 | 72 | 171 | 3.68e-12 | 65.1 |
| Msa1450100 | AT5G25890.1 | 44.444 | 72 | 38 | 1 | 171 | 242 | 47 | 116 | 5.61e-12 | 63.2 |
| Msa1450100 | AT4G28640.2 | 37.000 | 100 | 48 | 3 | 157 | 241 | 72 | 171 | 8.46e-12 | 64.3 |
Find 68 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAATTCTCCTGGACTTCC+TGG | 0.219552 | tig0032786:+37533 | Msa1450100:CDS |
| AATGTTCAAAAGAACCTTCT+TGG | 0.276149 | tig0032786:-35933 | Msa1450100:intergenic |
| TGCTTGTAGGTGATGTTCCT+TGG | 0.297899 | tig0032786:+37645 | Msa1450100:three_prime_UTR |
| GATGCCATTGATGAGTCTTC+TGG | 0.307952 | tig0032786:+36381 | Msa1450100:CDS |
| GAAAAGAATAAACAGGTTAA+TGG | 0.313899 | tig0032786:+36573 | Msa1450100:CDS |
| CTGTAATAGGGCACAGGTTG+TGG | 0.328430 | tig0032786:+37027 | Msa1450100:intron |
| GCTTGTAGGTGATGTTCCTT+GGG | 0.334696 | tig0032786:+37646 | Msa1450100:three_prime_UTR |
| CAAGACCTACAACAACTATA+TGG | 0.360524 | tig0032786:+37198 | Msa1450100:CDS |
| AATGTTCTTCAAATCCTTGT+TGG | 0.373464 | tig0032786:-36295 | Msa1450100:intergenic |
| TCTTTGAGGGATCTTCTTCA+TGG | 0.378941 | tig0032786:+37578 | Msa1450100:three_prime_UTR |
| CCTATGTAATCATGTTCTAA+TGG | 0.385937 | tig0032786:-36129 | Msa1450100:intergenic |
| ATCTTCTTCTCTCAACTTCA+AGG | 0.387877 | tig0032786:+36182 | Msa1450100:CDS |
| TCTCTATGTAAAAGTCAGTA+TGG | 0.396729 | tig0032786:+37144 | Msa1450100:CDS |
| AAGTTCCATATAGTTGTTGT+AGG | 0.402215 | tig0032786:-37203 | Msa1450100:intergenic |
| ATGTTCAAAAGAACCTTCTT+GGG | 0.409898 | tig0032786:-35932 | Msa1450100:intergenic |
| TTGATGAGTCTTCTGGGAAA+TGG | 0.428366 | tig0032786:+36388 | Msa1450100:CDS |
| AGATCAACCTTTCTGAGATA+AGG | 0.437164 | tig0032786:-37175 | Msa1450100:intergenic |
| TTTCCAACATTCCCTCCTCT+TGG | 0.438896 | tig0032786:-36456 | Msa1450100:intergenic |
| ATGAAGATAAAGATGGAGAT+TGG | 0.439416 | tig0032786:+37621 | Msa1450100:three_prime_UTR |
| CCTGGACTTCCTGGGAAAGA+TGG | 0.446287 | tig0032786:+37542 | Msa1450100:CDS |
| ATGCCATTGATGAGTCTTCT+GGG | 0.457749 | tig0032786:+36382 | Msa1450100:CDS |
| TGTACATGAAAAGAATAAAC+AGG | 0.460606 | tig0032786:+36566 | Msa1450100:CDS |
| TGTAATAGGGCACAGGTTGT+GGG | 0.465911 | tig0032786:+37028 | Msa1450100:intron |
| GACTAAGTGAGAGCTCTTTG+AGG | 0.466933 | tig0032786:+37564 | Msa1450100:exon |
| TCAGGTCAATGCAATTCTCC+TGG | 0.470704 | tig0032786:+37524 | Msa1450100:intron |
| CCATCTTTCCCAGGAAGTCC+AGG | 0.476059 | tig0032786:-37542 | Msa1450100:intergenic |
| AAGAACCTTGTAGCTAGTGT+TGG | 0.483602 | tig0032786:+36339 | Msa1450100:CDS |
| TTTCGAAACGATCGAATTGG+TGG | 0.491043 | tig0032786:-37055 | Msa1450100:intergenic |
| ACATAGAGACAGTCAAATCC+TGG | 0.496327 | tig0032786:-37130 | Msa1450100:intergenic |
| GTTAGTACCAATGGTAAAGC+AGG | 0.504295 | tig0032786:-37251 | Msa1450100:intergenic |
| TCAGTTGCTACTGCTGCTGC+TGG | 0.505717 | tig0032786:+36255 | Msa1450100:CDS |
| GATGGAGATTGGATGCTTGT+AGG | 0.506785 | tig0032786:+37632 | Msa1450100:three_prime_UTR |
| CTATCAGGAGATTCACAACC+AGG | 0.513603 | tig0032786:-36228 | Msa1450100:intergenic |
| GAGCTCAGACTAGGCTTACC+TGG | 0.513881 | tig0032786:+36210 | Msa1450100:CDS |
| TGGAGTTTCTCTATGAATGA+TGG | 0.515427 | tig0032786:+36408 | Msa1450100:CDS |
| TTTAGCAAATAATCCATCAA+TGG | 0.515926 | tig0032786:+36152 | Msa1450100:CDS |
| GCTAGTGTTGGAGCTAAAAG+AGG | 0.516388 | tig0032786:+36351 | Msa1450100:CDS |
| GTTGCTACTGCTGCTGCTGG+TGG | 0.518150 | tig0032786:+36258 | Msa1450100:CDS |
| TAGCTCCAACACTAGCTACA+AGG | 0.519601 | tig0032786:-36344 | Msa1450100:intergenic |
| CCATTAGAACATGATTACAT+AGG | 0.521656 | tig0032786:+36129 | Msa1450100:CDS |
| GATGAAGCTGAGGGAAAACC+AGG | 0.522587 | tig0032786:+37112 | Msa1450100:CDS |
| ATGTTCACCTGCTTTACCAT+TGG | 0.525163 | tig0032786:+37244 | Msa1450100:CDS |
| TAGTAGCATAGGAGAGGAGT+TGG | 0.526621 | tig0032786:-35967 | Msa1450100:intergenic |
| TCTCCAAGAGGAGGGAATGT+TGG | 0.528075 | tig0032786:+36453 | Msa1450100:CDS |
| TCACTTAGTCCATCTTTCCC+AGG | 0.528669 | tig0032786:-37551 | Msa1450100:intergenic |
| ACTAAGTGAGAGCTCTTTGA+GGG | 0.537995 | tig0032786:+37565 | Msa1450100:exon |
| GCAATTCTCCTGGACTTCCT+GGG | 0.538453 | tig0032786:+37534 | Msa1450100:CDS |
| CTTACATATGAAGATAAAGA+TGG | 0.540325 | tig0032786:+37614 | Msa1450100:three_prime_UTR |
| AGCATAGGAGAGGAGTTGGC+TGG | 0.541759 | tig0032786:-35963 | Msa1450100:intergenic |
| TATGTAAAAGTCAGTATGGA+TGG | 0.548265 | tig0032786:+37148 | Msa1450100:CDS |
| AGTCTCTTTCTTTGCCAACA+AGG | 0.555451 | tig0032786:+36281 | Msa1450100:CDS |
| AAAGAAACATACTTTGCAGC+AGG | 0.558479 | tig0032786:-36618 | Msa1450100:intergenic |
| TGATATGTATGTAGTAGCAT+AGG | 0.570912 | tig0032786:-35978 | Msa1450100:intergenic |
| TCTATGAATGATGGATCTGA+AGG | 0.572939 | tig0032786:+36417 | Msa1450100:CDS |
| AAGGAAACTGAGCTCAGACT+AGG | 0.575995 | tig0032786:+36201 | Msa1450100:CDS |
| AAACTTCTGTAATAGGGCAC+AGG | 0.579506 | tig0032786:+37021 | Msa1450100:intron |
| TGGTGCTCCTTATCTCAGAA+AGG | 0.583817 | tig0032786:+37168 | Msa1450100:CDS |
| TTTCCCAGAAGACTCATCAA+TGG | 0.587418 | tig0032786:-36385 | Msa1450100:intergenic |
| TGGTACAGAAAGTCCCAAGA+AGG | 0.589577 | tig0032786:+35919 | Msa1450100:five_prime_UTR |
| GTTTGTTCTCTCCAAGAGGA+GGG | 0.594139 | tig0032786:+36445 | Msa1450100:CDS |
| AAAGAACAATGATGAAGCTG+AGG | 0.598000 | tig0032786:+37102 | Msa1450100:CDS |
| GGTTTGTTCTCTCCAAGAGG+AGG | 0.598726 | tig0032786:+36444 | Msa1450100:CDS |
| TGTATGTAGTAGCATAGGAG+AGG | 0.607709 | tig0032786:-35973 | Msa1450100:intergenic |
| AATGATGGATCTGAAGGAGC+TGG | 0.608371 | tig0032786:+36423 | Msa1450100:CDS |
| CTAGCTACAAGGTTCTTCAA+AGG | 0.626425 | tig0032786:-36333 | Msa1450100:intergenic |
| ATAGGGCACAGGTTGTGGGA+TGG | 0.638025 | tig0032786:+37032 | Msa1450100:intron |
| AAGAACAATGATGAAGCTGA+GGG | 0.641734 | tig0032786:+37103 | Msa1450100:CDS |
| GCTGGTTTGTTCTCTCCAAG+AGG | 0.643608 | tig0032786:+36441 | Msa1450100:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTGATATTTTTTCATCT+AGG | + | tig0032786:36090-36109 | Msa1450100:five_prime_UTR | 15.0% |
| !!! | AGTTTTTTGTTTGTTTTTTA+TGG | + | tig0032786:36793-36812 | Msa1450100:intron | 15.0% |
| !!! | GTTTTTTGTTTGTTTTTTAT+GGG | + | tig0032786:36794-36813 | Msa1450100:intron | 15.0% |
| !!! | AAATTATTTACATGTGTTTT+AGG | + | tig0032786:37345-37364 | Msa1450100:intron | 15.0% |
| !!! | TATTTGATATTTTTTCATCT+AGG | + | tig0032786:36090-36109 | Msa1450100:five_prime_UTR | 15.0% |
| !!! | AGTTTTTTGTTTGTTTTTTA+TGG | + | tig0032786:36793-36812 | Msa1450100:intron | 15.0% |
| !!! | GTTTTTTGTTTGTTTTTTAT+GGG | + | tig0032786:36794-36813 | Msa1450100:intron | 15.0% |
| !!! | AAATTATTTACATGTGTTTT+AGG | + | tig0032786:37345-37364 | Msa1450100:intron | 15.0% |
| !! | AAAAGAAAGAGTAAAAAGTT+TGG | + | tig0032786:35899-35918 | Msa1450100:five_prime_UTR | 20.0% |
| !! | AAAAAATCATGTCTATTCAA+GGG | - | tig0032786:36840-36859 | Msa1450100:intergenic | 20.0% |
| !! | AAAAAAATCATGTCTATTCA+AGG | - | tig0032786:36841-36860 | Msa1450100:intergenic | 20.0% |
| !!! | CACTATTTTTGAATTATACA+TGG | - | tig0032786:36924-36943 | Msa1450100:intergenic | 20.0% |
| !! | CATGTATAATTCAAAAATAG+TGG | + | tig0032786:36922-36941 | Msa1450100:intron | 20.0% |
| !! | AATAGTGGTTAATGAATATT+TGG | + | tig0032786:36937-36956 | Msa1450100:intron | 20.0% |
| !! | ATAGTGGTTAATGAATATTT+GGG | + | tig0032786:36938-36957 | Msa1450100:intron | 20.0% |
| !! | GTGTGTAAAAAATCAAAATA+AGG | - | tig0032786:37307-37326 | Msa1450100:intergenic | 20.0% |
| !!! | ATTTTACAGCAAGTAAAAAA+AGG | - | tig0032786:37329-37348 | Msa1450100:intergenic | 20.0% |
| !! | AAAAGAAAGAGTAAAAAGTT+TGG | + | tig0032786:35899-35918 | Msa1450100:five_prime_UTR | 20.0% |
| !! | AAAAAATCATGTCTATTCAA+GGG | - | tig0032786:36840-36859 | Msa1450100:intergenic | 20.0% |
| !! | AAAAAAATCATGTCTATTCA+AGG | - | tig0032786:36841-36860 | Msa1450100:intergenic | 20.0% |
| !!! | CACTATTTTTGAATTATACA+TGG | - | tig0032786:36924-36943 | Msa1450100:intergenic | 20.0% |
| !! | CATGTATAATTCAAAAATAG+TGG | + | tig0032786:36922-36941 | Msa1450100:intron | 20.0% |
| !! | AATAGTGGTTAATGAATATT+TGG | + | tig0032786:36937-36956 | Msa1450100:intron | 20.0% |
| !! | ATAGTGGTTAATGAATATTT+GGG | + | tig0032786:36938-36957 | Msa1450100:intron | 20.0% |
| !! | GTGTGTAAAAAATCAAAATA+AGG | - | tig0032786:37307-37326 | Msa1450100:intergenic | 20.0% |
| !!! | ATTTTACAGCAAGTAAAAAA+AGG | - | tig0032786:37329-37348 | Msa1450100:intergenic | 20.0% |
| ! | TTTAGCAAATAATCCATCAA+TGG | + | tig0032786:36152-36171 | Msa1450100:CDS | 25.0% |
| ! | TGTACATGAAAAGAATAAAC+AGG | + | tig0032786:36566-36585 | Msa1450100:CDS | 25.0% |
| ! | GAAAAGAATAAACAGGTTAA+TGG | + | tig0032786:36573-36592 | Msa1450100:CDS | 25.0% |
| ! | CAAAAAAAAGTAAACAGAAC+AGG | - | tig0032786:36689-36708 | Msa1450100:intergenic | 25.0% |
| !!! | ACATGATTTTTTTCTCTCTT+TGG | + | tig0032786:36848-36867 | Msa1450100:intron | 25.0% |
| ! | TTGTATCAAACTTCTGTAAT+AGG | + | tig0032786:37014-37033 | Msa1450100:intron | 25.0% |
| ! | TGTATCAAACTTCTGTAATA+GGG | + | tig0032786:37015-37034 | Msa1450100:intron | 25.0% |
| ! | TAAGGTAAGTAATTTGAAGA+AGG | - | tig0032786:37281-37300 | Msa1450100:intergenic | 25.0% |
| ! | AAAATCAAAATAAGGAGCTA+AGG | - | tig0032786:37299-37318 | Msa1450100:intergenic | 25.0% |
| ! | ATATTCGTATTCCTAAAATC+AGG | + | tig0032786:37506-37525 | Msa1450100:intron | 25.0% |
| ! | CTTACATATGAAGATAAAGA+TGG | + | tig0032786:37614-37633 | Msa1450100:three_prime_UTR | 25.0% |
| ! | TTTAGCAAATAATCCATCAA+TGG | + | tig0032786:36152-36171 | Msa1450100:CDS | 25.0% |
| ! | TGTACATGAAAAGAATAAAC+AGG | + | tig0032786:36566-36585 | Msa1450100:CDS | 25.0% |
| ! | GAAAAGAATAAACAGGTTAA+TGG | + | tig0032786:36573-36592 | Msa1450100:CDS | 25.0% |
| ! | CAAAAAAAAGTAAACAGAAC+AGG | - | tig0032786:36689-36708 | Msa1450100:intergenic | 25.0% |
| !!! | ACATGATTTTTTTCTCTCTT+TGG | + | tig0032786:36848-36867 | Msa1450100:intron | 25.0% |
| ! | TTGTATCAAACTTCTGTAAT+AGG | + | tig0032786:37014-37033 | Msa1450100:intron | 25.0% |
| ! | TGTATCAAACTTCTGTAATA+GGG | + | tig0032786:37015-37034 | Msa1450100:intron | 25.0% |
| ! | TAAGGTAAGTAATTTGAAGA+AGG | - | tig0032786:37281-37300 | Msa1450100:intergenic | 25.0% |
| ! | AAAATCAAAATAAGGAGCTA+AGG | - | tig0032786:37299-37318 | Msa1450100:intergenic | 25.0% |
| ! | ATATTCGTATTCCTAAAATC+AGG | + | tig0032786:37506-37525 | Msa1450100:intron | 25.0% |
| ! | CTTACATATGAAGATAAAGA+TGG | + | tig0032786:37614-37633 | Msa1450100:three_prime_UTR | 25.0% |
| ATGTTCAAAAGAACCTTCTT+GGG | - | tig0032786:35935-35954 | Msa1450100:intergenic | 30.0% | |
| AATGTTCAAAAGAACCTTCT+TGG | - | tig0032786:35936-35955 | Msa1450100:intergenic | 30.0% | |
| TGATATGTATGTAGTAGCAT+AGG | - | tig0032786:35981-36000 | Msa1450100:intergenic | 30.0% | |
| CCTATGTAATCATGTTCTAA+TGG | - | tig0032786:36132-36151 | Msa1450100:intergenic | 30.0% | |
| CCATTAGAACATGATTACAT+AGG | + | tig0032786:36129-36148 | Msa1450100:CDS | 30.0% | |
| AATGTTCTTCAAATCCTTGT+TGG | - | tig0032786:36298-36317 | Msa1450100:intergenic | 30.0% | |
| AATGTTGGAAAAACTCTTGT+TGG | + | tig0032786:36468-36487 | Msa1450100:CDS | 30.0% | |
| TGCAACAAAAAACATCAAAG+AGG | + | tig0032786:36530-36549 | Msa1450100:CDS | 30.0% | |
| ! | CTTTTGTTCATGTCATGTTT+TGG | + | tig0032786:36715-36734 | Msa1450100:intron | 30.0% |
| !!! | ATTTGGGTTGTTTTCAGAAA+AGG | + | tig0032786:36954-36973 | Msa1450100:intron | 30.0% |
| TACAGAAGTTTGATACAATG+AGG | - | tig0032786:37012-37031 | Msa1450100:intergenic | 30.0% | |
| !!! | TTTTTTCGAAACGATCGAAT+TGG | - | tig0032786:37061-37080 | Msa1450100:intergenic | 30.0% |
| TCTCTATGTAAAAGTCAGTA+TGG | + | tig0032786:37144-37163 | Msa1450100:CDS | 30.0% | |
| TATGTAAAAGTCAGTATGGA+TGG | + | tig0032786:37148-37167 | Msa1450100:CDS | 30.0% | |
| AAGTTCCATATAGTTGTTGT+AGG | - | tig0032786:37206-37225 | Msa1450100:intergenic | 30.0% | |
| TATCTTATCTAGATCCTGTT+TGG | + | tig0032786:37421-37440 | Msa1450100:intron | 30.0% | |
| AATTAACTGTGTAACCAAAC+AGG | - | tig0032786:37438-37457 | Msa1450100:intergenic | 30.0% | |
| !! | AATTGCATTGACCTGATTTT+AGG | - | tig0032786:37520-37539 | Msa1450100:intergenic | 30.0% |
| ATGAAGATAAAGATGGAGAT+TGG | + | tig0032786:37621-37640 | Msa1450100:three_prime_UTR | 30.0% | |
| ATGTTCAAAAGAACCTTCTT+GGG | - | tig0032786:35935-35954 | Msa1450100:intergenic | 30.0% | |
| AATGTTCAAAAGAACCTTCT+TGG | - | tig0032786:35936-35955 | Msa1450100:intergenic | 30.0% | |
| TGATATGTATGTAGTAGCAT+AGG | - | tig0032786:35981-36000 | Msa1450100:intergenic | 30.0% | |
| CCTATGTAATCATGTTCTAA+TGG | - | tig0032786:36132-36151 | Msa1450100:intergenic | 30.0% | |
| CCATTAGAACATGATTACAT+AGG | + | tig0032786:36129-36148 | Msa1450100:CDS | 30.0% | |
| AATGTTCTTCAAATCCTTGT+TGG | - | tig0032786:36298-36317 | Msa1450100:intergenic | 30.0% | |
| AATGTTGGAAAAACTCTTGT+TGG | + | tig0032786:36468-36487 | Msa1450100:CDS | 30.0% | |
| TGCAACAAAAAACATCAAAG+AGG | + | tig0032786:36530-36549 | Msa1450100:CDS | 30.0% | |
| ! | CTTTTGTTCATGTCATGTTT+TGG | + | tig0032786:36715-36734 | Msa1450100:intron | 30.0% |
| !!! | ATTTGGGTTGTTTTCAGAAA+AGG | + | tig0032786:36954-36973 | Msa1450100:intron | 30.0% |
| TACAGAAGTTTGATACAATG+AGG | - | tig0032786:37012-37031 | Msa1450100:intergenic | 30.0% | |
| !!! | TTTTTTCGAAACGATCGAAT+TGG | - | tig0032786:37061-37080 | Msa1450100:intergenic | 30.0% |
| TCTCTATGTAAAAGTCAGTA+TGG | + | tig0032786:37144-37163 | Msa1450100:CDS | 30.0% | |
| TATGTAAAAGTCAGTATGGA+TGG | + | tig0032786:37148-37167 | Msa1450100:CDS | 30.0% | |
| AAGTTCCATATAGTTGTTGT+AGG | - | tig0032786:37206-37225 | Msa1450100:intergenic | 30.0% | |
| TATCTTATCTAGATCCTGTT+TGG | + | tig0032786:37421-37440 | Msa1450100:intron | 30.0% | |
| AATTAACTGTGTAACCAAAC+AGG | - | tig0032786:37438-37457 | Msa1450100:intergenic | 30.0% | |
| !! | AATTGCATTGACCTGATTTT+AGG | - | tig0032786:37520-37539 | Msa1450100:intergenic | 30.0% |
| ATGAAGATAAAGATGGAGAT+TGG | + | tig0032786:37621-37640 | Msa1450100:three_prime_UTR | 30.0% | |
| ! | GAAGATGTTTTGTCCATTGA+TGG | - | tig0032786:36168-36187 | Msa1450100:intergenic | 35.0% |
| ATCTTCTTCTCTCAACTTCA+AGG | + | tig0032786:36182-36201 | Msa1450100:CDS | 35.0% | |
| !! | GTAGCAACTGATTTTCTATC+AGG | - | tig0032786:36246-36265 | Msa1450100:intergenic | 35.0% |
| TGGAGTTTCTCTATGAATGA+TGG | + | tig0032786:36408-36427 | Msa1450100:CDS | 35.0% | |
| !! | TCTATGAATGATGGATCTGA+AGG | + | tig0032786:36417-36436 | Msa1450100:CDS | 35.0% |
| AAAGAAACATACTTTGCAGC+AGG | - | tig0032786:36621-36640 | Msa1450100:intergenic | 35.0% | |
| TGGTTACCTAGATTAGACAA+AGG | + | tig0032786:36735-36754 | Msa1450100:intron | 35.0% | |
| CTTTCACCTTTGTCTAATCT+AGG | - | tig0032786:36744-36763 | Msa1450100:intergenic | 35.0% | |
| ATCGTTTCGAAAAAACACGA+TGG | + | tig0032786:37066-37085 | Msa1450100:CDS | 35.0% | |
| AAAGAACAATGATGAAGCTG+AGG | + | tig0032786:37102-37121 | Msa1450100:CDS | 35.0% | |
| AAGAACAATGATGAAGCTGA+GGG | + | tig0032786:37103-37122 | Msa1450100:CDS | 35.0% | |
| !! | AGATCAACCTTTCTGAGATA+AGG | - | tig0032786:37178-37197 | Msa1450100:intergenic | 35.0% |
| CAAGACCTACAACAACTATA+TGG | + | tig0032786:37198-37217 | Msa1450100:CDS | 35.0% | |
| GAAGGTAAAGTTAGTACCAA+TGG | - | tig0032786:37263-37282 | Msa1450100:intergenic | 35.0% | |
| TTACATGAGAAAGTCAAGCT+AGG | - | tig0032786:37380-37399 | Msa1450100:intergenic | 35.0% | |
| ! | GAAGATGTTTTGTCCATTGA+TGG | - | tig0032786:36168-36187 | Msa1450100:intergenic | 35.0% |
| ATCTTCTTCTCTCAACTTCA+AGG | + | tig0032786:36182-36201 | Msa1450100:CDS | 35.0% | |
| !! | GTAGCAACTGATTTTCTATC+AGG | - | tig0032786:36246-36265 | Msa1450100:intergenic | 35.0% |
| TGGAGTTTCTCTATGAATGA+TGG | + | tig0032786:36408-36427 | Msa1450100:CDS | 35.0% | |
| !! | TCTATGAATGATGGATCTGA+AGG | + | tig0032786:36417-36436 | Msa1450100:CDS | 35.0% |
| AAAGAAACATACTTTGCAGC+AGG | - | tig0032786:36621-36640 | Msa1450100:intergenic | 35.0% | |
| TGGTTACCTAGATTAGACAA+AGG | + | tig0032786:36735-36754 | Msa1450100:intron | 35.0% | |
| CTTTCACCTTTGTCTAATCT+AGG | - | tig0032786:36744-36763 | Msa1450100:intergenic | 35.0% | |
| ATCGTTTCGAAAAAACACGA+TGG | + | tig0032786:37066-37085 | Msa1450100:CDS | 35.0% | |
| AAAGAACAATGATGAAGCTG+AGG | + | tig0032786:37102-37121 | Msa1450100:CDS | 35.0% | |
| AAGAACAATGATGAAGCTGA+GGG | + | tig0032786:37103-37122 | Msa1450100:CDS | 35.0% | |
| !! | AGATCAACCTTTCTGAGATA+AGG | - | tig0032786:37178-37197 | Msa1450100:intergenic | 35.0% |
| CAAGACCTACAACAACTATA+TGG | + | tig0032786:37198-37217 | Msa1450100:CDS | 35.0% | |
| GAAGGTAAAGTTAGTACCAA+TGG | - | tig0032786:37263-37282 | Msa1450100:intergenic | 35.0% | |
| TTACATGAGAAAGTCAAGCT+AGG | - | tig0032786:37380-37399 | Msa1450100:intergenic | 35.0% | |
| TGTATGTAGTAGCATAGGAG+AGG | - | tig0032786:35976-35995 | Msa1450100:intergenic | 40.0% | |
| AGTCTCTTTCTTTGCCAACA+AGG | + | tig0032786:36281-36300 | Msa1450100:CDS | 40.0% | |
| CTAGCTACAAGGTTCTTCAA+AGG | - | tig0032786:36336-36355 | Msa1450100:intergenic | 40.0% | |
| AAGAACCTTGTAGCTAGTGT+TGG | + | tig0032786:36339-36358 | Msa1450100:CDS | 40.0% | |
| ATGCCATTGATGAGTCTTCT+GGG | + | tig0032786:36382-36401 | Msa1450100:CDS | 40.0% | |
| TTTCCCAGAAGACTCATCAA+TGG | - | tig0032786:36388-36407 | Msa1450100:intergenic | 40.0% | |
| ! | TTGATGAGTCTTCTGGGAAA+TGG | + | tig0032786:36388-36407 | Msa1450100:CDS | 40.0% |
| AAACTTCTGTAATAGGGCAC+AGG | + | tig0032786:37021-37040 | Msa1450100:intron | 40.0% | |
| TTTCGAAACGATCGAATTGG+TGG | - | tig0032786:37058-37077 | Msa1450100:intergenic | 40.0% | |
| ACATAGAGACAGTCAAATCC+TGG | - | tig0032786:37133-37152 | Msa1450100:intergenic | 40.0% | |
| ATGTTCACCTGCTTTACCAT+TGG | + | tig0032786:37244-37263 | Msa1450100:CDS | 40.0% | |
| GTTAGTACCAATGGTAAAGC+AGG | - | tig0032786:37254-37273 | Msa1450100:intergenic | 40.0% | |
| ACTAAGTGAGAGCTCTTTGA+GGG | + | tig0032786:37565-37584 | Msa1450100:exon | 40.0% | |
| ! | TCTTTGAGGGATCTTCTTCA+TGG | + | tig0032786:37578-37597 | Msa1450100:three_prime_UTR | 40.0% |
| TGTATGTAGTAGCATAGGAG+AGG | - | tig0032786:35976-35995 | Msa1450100:intergenic | 40.0% | |
| AGTCTCTTTCTTTGCCAACA+AGG | + | tig0032786:36281-36300 | Msa1450100:CDS | 40.0% | |
| CTAGCTACAAGGTTCTTCAA+AGG | - | tig0032786:36336-36355 | Msa1450100:intergenic | 40.0% | |
| AAGAACCTTGTAGCTAGTGT+TGG | + | tig0032786:36339-36358 | Msa1450100:CDS | 40.0% | |
| ATGCCATTGATGAGTCTTCT+GGG | + | tig0032786:36382-36401 | Msa1450100:CDS | 40.0% | |
| TTTCCCAGAAGACTCATCAA+TGG | - | tig0032786:36388-36407 | Msa1450100:intergenic | 40.0% | |
| ! | TTGATGAGTCTTCTGGGAAA+TGG | + | tig0032786:36388-36407 | Msa1450100:CDS | 40.0% |
| AAACTTCTGTAATAGGGCAC+AGG | + | tig0032786:37021-37040 | Msa1450100:intron | 40.0% | |
| TTTCGAAACGATCGAATTGG+TGG | - | tig0032786:37058-37077 | Msa1450100:intergenic | 40.0% | |
| ACATAGAGACAGTCAAATCC+TGG | - | tig0032786:37133-37152 | Msa1450100:intergenic | 40.0% | |
| ATGTTCACCTGCTTTACCAT+TGG | + | tig0032786:37244-37263 | Msa1450100:CDS | 40.0% | |
| GTTAGTACCAATGGTAAAGC+AGG | - | tig0032786:37254-37273 | Msa1450100:intergenic | 40.0% | |
| ACTAAGTGAGAGCTCTTTGA+GGG | + | tig0032786:37565-37584 | Msa1450100:exon | 40.0% | |
| ! | TCTTTGAGGGATCTTCTTCA+TGG | + | tig0032786:37578-37597 | Msa1450100:three_prime_UTR | 40.0% |
| TGGTACAGAAAGTCCCAAGA+AGG | + | tig0032786:35919-35938 | Msa1450100:five_prime_UTR | 45.0% | |
| TAGTAGCATAGGAGAGGAGT+TGG | - | tig0032786:35970-35989 | Msa1450100:intergenic | 45.0% | |
| AAGGAAACTGAGCTCAGACT+AGG | + | tig0032786:36201-36220 | Msa1450100:CDS | 45.0% | |
| CTATCAGGAGATTCACAACC+AGG | - | tig0032786:36231-36250 | Msa1450100:intergenic | 45.0% | |
| TAGCTCCAACACTAGCTACA+AGG | - | tig0032786:36347-36366 | Msa1450100:intergenic | 45.0% | |
| ! | GCTAGTGTTGGAGCTAAAAG+AGG | + | tig0032786:36351-36370 | Msa1450100:CDS | 45.0% |
| GATGCCATTGATGAGTCTTC+TGG | + | tig0032786:36381-36400 | Msa1450100:CDS | 45.0% | |
| !! | AATGATGGATCTGAAGGAGC+TGG | + | tig0032786:36423-36442 | Msa1450100:CDS | 45.0% |
| GTTTGTTCTCTCCAAGAGGA+GGG | + | tig0032786:36445-36464 | Msa1450100:CDS | 45.0% | |
| TTTCCAACATTCCCTCCTCT+TGG | - | tig0032786:36459-36478 | Msa1450100:intergenic | 45.0% | |
| TGTAATAGGGCACAGGTTGT+GGG | + | tig0032786:37028-37047 | Msa1450100:intron | 45.0% | |
| TGGTGCTCCTTATCTCAGAA+AGG | + | tig0032786:37168-37187 | Msa1450100:CDS | 45.0% | |
| TCAGGTCAATGCAATTCTCC+TGG | + | tig0032786:37524-37543 | Msa1450100:intron | 45.0% | |
| TCACTTAGTCCATCTTTCCC+AGG | - | tig0032786:37554-37573 | Msa1450100:intergenic | 45.0% | |
| GACTAAGTGAGAGCTCTTTG+AGG | + | tig0032786:37564-37583 | Msa1450100:exon | 45.0% | |
| GATGGAGATTGGATGCTTGT+AGG | + | tig0032786:37632-37651 | Msa1450100:three_prime_UTR | 45.0% | |
| TGGTACAGAAAGTCCCAAGA+AGG | + | tig0032786:35919-35938 | Msa1450100:five_prime_UTR | 45.0% | |
| TAGTAGCATAGGAGAGGAGT+TGG | - | tig0032786:35970-35989 | Msa1450100:intergenic | 45.0% | |
| AAGGAAACTGAGCTCAGACT+AGG | + | tig0032786:36201-36220 | Msa1450100:CDS | 45.0% | |
| CTATCAGGAGATTCACAACC+AGG | - | tig0032786:36231-36250 | Msa1450100:intergenic | 45.0% | |
| TAGCTCCAACACTAGCTACA+AGG | - | tig0032786:36347-36366 | Msa1450100:intergenic | 45.0% | |
| ! | GCTAGTGTTGGAGCTAAAAG+AGG | + | tig0032786:36351-36370 | Msa1450100:CDS | 45.0% |
| GATGCCATTGATGAGTCTTC+TGG | + | tig0032786:36381-36400 | Msa1450100:CDS | 45.0% | |
| !! | AATGATGGATCTGAAGGAGC+TGG | + | tig0032786:36423-36442 | Msa1450100:CDS | 45.0% |
| GTTTGTTCTCTCCAAGAGGA+GGG | + | tig0032786:36445-36464 | Msa1450100:CDS | 45.0% | |
| TTTCCAACATTCCCTCCTCT+TGG | - | tig0032786:36459-36478 | Msa1450100:intergenic | 45.0% | |
| TGTAATAGGGCACAGGTTGT+GGG | + | tig0032786:37028-37047 | Msa1450100:intron | 45.0% | |
| TGGTGCTCCTTATCTCAGAA+AGG | + | tig0032786:37168-37187 | Msa1450100:CDS | 45.0% | |
| TCAGGTCAATGCAATTCTCC+TGG | + | tig0032786:37524-37543 | Msa1450100:intron | 45.0% | |
| TCACTTAGTCCATCTTTCCC+AGG | - | tig0032786:37554-37573 | Msa1450100:intergenic | 45.0% | |
| GACTAAGTGAGAGCTCTTTG+AGG | + | tig0032786:37564-37583 | Msa1450100:exon | 45.0% | |
| GATGGAGATTGGATGCTTGT+AGG | + | tig0032786:37632-37651 | Msa1450100:three_prime_UTR | 45.0% | |
| !! | GCTGGTTTGTTCTCTCCAAG+AGG | + | tig0032786:36441-36460 | Msa1450100:CDS | 50.0% |
| ! | GGTTTGTTCTCTCCAAGAGG+AGG | + | tig0032786:36444-36463 | Msa1450100:CDS | 50.0% |
| TCTCCAAGAGGAGGGAATGT+TGG | + | tig0032786:36453-36472 | Msa1450100:CDS | 50.0% | |
| CTGTAATAGGGCACAGGTTG+TGG | + | tig0032786:37027-37046 | Msa1450100:intron | 50.0% | |
| GATGAAGCTGAGGGAAAACC+AGG | + | tig0032786:37112-37131 | Msa1450100:CDS | 50.0% | |
| TGCAATTCTCCTGGACTTCC+TGG | + | tig0032786:37533-37552 | Msa1450100:CDS | 50.0% | |
| GCAATTCTCCTGGACTTCCT+GGG | + | tig0032786:37534-37553 | Msa1450100:CDS | 50.0% | |
| !! | GCTGGTTTGTTCTCTCCAAG+AGG | + | tig0032786:36441-36460 | Msa1450100:CDS | 50.0% |
| ! | GGTTTGTTCTCTCCAAGAGG+AGG | + | tig0032786:36444-36463 | Msa1450100:CDS | 50.0% |
| TCTCCAAGAGGAGGGAATGT+TGG | + | tig0032786:36453-36472 | Msa1450100:CDS | 50.0% | |
| CTGTAATAGGGCACAGGTTG+TGG | + | tig0032786:37027-37046 | Msa1450100:intron | 50.0% | |
| GATGAAGCTGAGGGAAAACC+AGG | + | tig0032786:37112-37131 | Msa1450100:CDS | 50.0% | |
| TGCAATTCTCCTGGACTTCC+TGG | + | tig0032786:37533-37552 | Msa1450100:CDS | 50.0% | |
| GCAATTCTCCTGGACTTCCT+GGG | + | tig0032786:37534-37553 | Msa1450100:CDS | 50.0% | |
| AGCATAGGAGAGGAGTTGGC+TGG | - | tig0032786:35966-35985 | Msa1450100:intergenic | 55.0% | |
| GAGCTCAGACTAGGCTTACC+TGG | + | tig0032786:36210-36229 | Msa1450100:CDS | 55.0% | |
| TCAGTTGCTACTGCTGCTGC+TGG | + | tig0032786:36255-36274 | Msa1450100:CDS | 55.0% | |
| ATAGGGCACAGGTTGTGGGA+TGG | + | tig0032786:37032-37051 | Msa1450100:intron | 55.0% | |
| CCATCTTTCCCAGGAAGTCC+AGG | - | tig0032786:37545-37564 | Msa1450100:intergenic | 55.0% | |
| CCTGGACTTCCTGGGAAAGA+TGG | + | tig0032786:37542-37561 | Msa1450100:CDS | 55.0% | |
| AGCATAGGAGAGGAGTTGGC+TGG | - | tig0032786:35966-35985 | Msa1450100:intergenic | 55.0% | |
| GAGCTCAGACTAGGCTTACC+TGG | + | tig0032786:36210-36229 | Msa1450100:CDS | 55.0% | |
| TCAGTTGCTACTGCTGCTGC+TGG | + | tig0032786:36255-36274 | Msa1450100:CDS | 55.0% | |
| ATAGGGCACAGGTTGTGGGA+TGG | + | tig0032786:37032-37051 | Msa1450100:intron | 55.0% | |
| CCATCTTTCCCAGGAAGTCC+AGG | - | tig0032786:37545-37564 | Msa1450100:intergenic | 55.0% | |
| CCTGGACTTCCTGGGAAAGA+TGG | + | tig0032786:37542-37561 | Msa1450100:CDS | 55.0% | |
| GTTGCTACTGCTGCTGCTGG+TGG | + | tig0032786:36258-36277 | Msa1450100:CDS | 60.0% | |
| GTTGCTACTGCTGCTGCTGG+TGG | + | tig0032786:36258-36277 | Msa1450100:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0032786 | gene | 35899 | 37665 | 35899 | ID=Msa1450100;Name=Msa1450100 |
| tig0032786 | mRNA | 35899 | 37665 | 35899 | ID=Msa1450100-mRNA-1;Parent=Msa1450100;Name=Msa1450100-mRNA-1;_AED=0.07;_eAED=0.07;_QI=221|0.5|0.66|1|0.5|0.33|3|96|259 |
| tig0032786 | exon | 35899 | 36628 | 35899 | ID=Msa1450100-mRNA-1:exon:17267;Parent=Msa1450100-mRNA-1 |
| tig0032786 | exon | 37036 | 37264 | 37036 | ID=Msa1450100-mRNA-1:exon:17268;Parent=Msa1450100-mRNA-1 |
| tig0032786 | exon | 37528 | 37665 | 37528 | ID=Msa1450100-mRNA-1:exon:17269;Parent=Msa1450100-mRNA-1 |
| tig0032786 | five_prime_UTR | 35899 | 36119 | 35899 | ID=Msa1450100-mRNA-1:five_prime_utr;Parent=Msa1450100-mRNA-1 |
| tig0032786 | CDS | 36120 | 36628 | 36120 | ID=Msa1450100-mRNA-1:cds;Parent=Msa1450100-mRNA-1 |
| tig0032786 | CDS | 37036 | 37264 | 37036 | ID=Msa1450100-mRNA-1:cds;Parent=Msa1450100-mRNA-1 |
| tig0032786 | CDS | 37528 | 37569 | 37528 | ID=Msa1450100-mRNA-1:cds;Parent=Msa1450100-mRNA-1 |
| tig0032786 | three_prime_UTR | 37570 | 37665 | 37570 | ID=Msa1450100-mRNA-1:three_prime_utr;Parent=Msa1450100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
