Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0843640 | XP_024639311.1 | 64.194 | 391 | 69 | 5 | 24 | 390 | 226 | 569 | 1.01e-144 | 434 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0843640 | sp|Q7XA39|RGA4_SOLBU | 33.787 | 367 | 218 | 8 | 28 | 388 | 638 | 985 | 8.50e-45 | 170 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0843640 | A0A396HT66 | 64.194 | 391 | 69 | 5 | 24 | 390 | 226 | 569 | 4.81e-145 | 434 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002930 | Msa0843640 | 0.817472 | 3.239242e-52 | -8.615850e-47 |
| Msa0010560 | Msa0843640 | 0.812953 | 3.270201e-51 | -8.615850e-47 |
| Msa0017510 | Msa0843640 | 0.818420 | 1.978626e-52 | -8.615850e-47 |
| Msa0022640 | Msa0843640 | 0.816474 | 5.427069e-52 | -8.615850e-47 |
| Msa0036430 | Msa0843640 | 0.801231 | 9.927543e-49 | -8.615850e-47 |
| Msa0037700 | Msa0843640 | 0.802002 | 6.897422e-49 | -8.615850e-47 |
| Msa0050990 | Msa0843640 | 0.817734 | 2.828355e-52 | -8.615850e-47 |
| Msa0106790 | Msa0843640 | 0.805973 | 1.030552e-49 | -8.615850e-47 |
| Msa0118400 | Msa0843640 | 0.831315 | 1.790185e-55 | -8.615850e-47 |
| Msa0623080 | Msa0843640 | 0.805759 | 1.143289e-49 | -8.615850e-47 |
| Msa0656530 | Msa0843640 | 0.818052 | 2.397300e-52 | -8.615850e-47 |
| Msa0682530 | Msa0843640 | 0.848052 | 7.833604e-60 | -8.615850e-47 |
| Msa0707220 | Msa0843640 | 0.811401 | 7.132186e-51 | -8.615850e-47 |
| Msa0737190 | Msa0843640 | 0.800958 | 1.128930e-48 | -8.615850e-47 |
| Msa0754030 | Msa0843640 | 0.802603 | 5.187163e-49 | -8.615850e-47 |
| Msa0756630 | Msa0843640 | -0.812608 | 3.891320e-51 | -8.615850e-47 |
| Msa0807110 | Msa0843640 | 0.811110 | 8.247933e-51 | -8.615850e-47 |
| Msa0833040 | Msa0843640 | 0.810117 | 1.351594e-50 | -8.615850e-47 |
| Msa0130570 | Msa0843640 | 0.819461 | 1.147585e-52 | -8.615850e-47 |
| Msa0147560 | Msa0843640 | 0.814256 | 1.690208e-51 | -8.615850e-47 |
| Msa0150270 | Msa0843640 | 0.801173 | 1.020051e-48 | -8.615850e-47 |
| Msa0157290 | Msa0843640 | 0.818326 | 2.077831e-52 | -8.615850e-47 |
| Msa0161680 | Msa0843640 | 0.820502 | 6.631581e-53 | -8.615850e-47 |
| Msa0165220 | Msa0843640 | 0.801651 | 8.144420e-49 | -8.615850e-47 |
| Msa0173990 | Msa0843640 | 0.832231 | 1.063933e-55 | -8.615850e-47 |
| Msa0197660 | Msa0843640 | 0.835429 | 1.686719e-56 | -8.615850e-47 |
| Msa0203030 | Msa0843640 | 0.813675 | 2.270468e-51 | -8.615850e-47 |
| Msa0219190 | Msa0843640 | 0.829135 | 6.097146e-55 | -8.615850e-47 |
| Msa0221290 | Msa0843640 | 0.804610 | 1.988798e-49 | -8.615850e-47 |
| Msa0378500 | Msa0843640 | 0.821852 | 3.239525e-53 | -8.615850e-47 |
| Msa0412800 | Msa0843640 | 0.800711 | 1.267690e-48 | -8.615850e-47 |
| Msa0419820 | Msa0843640 | 0.827125 | 1.859557e-54 | -8.615850e-47 |
| Msa0436500 | Msa0843640 | 0.842194 | 3.001704e-58 | -8.615850e-47 |
| Msa0457190 | Msa0843640 | 0.811353 | 7.304113e-51 | -8.615850e-47 |
| Msa0480980 | Msa0843640 | 0.809463 | 1.868769e-50 | -8.615850e-47 |
| Msa0239800 | Msa0843640 | 0.841093 | 5.857496e-58 | -8.615850e-47 |
| Msa0241640 | Msa0843640 | 0.804879 | 1.747519e-49 | -8.615850e-47 |
| Msa0242270 | Msa0843640 | 0.809401 | 1.927358e-50 | -8.615850e-47 |
| Msa0242480 | Msa0843640 | 0.805058 | 1.603396e-49 | -8.615850e-47 |
| Msa0262560 | Msa0843640 | 0.802642 | 5.092407e-49 | -8.615850e-47 |
| Msa0277820 | Msa0843640 | 0.819086 | 1.396854e-52 | -8.615850e-47 |
| Msa0279790 | Msa0843640 | 0.818532 | 1.866507e-52 | -8.615850e-47 |
| Msa0296710 | Msa0843640 | 0.836750 | 7.792396e-57 | -8.615850e-47 |
| Msa0298240 | Msa0843640 | 0.810492 | 1.122238e-50 | -8.615850e-47 |
| Msa0317510 | Msa0843640 | 0.842564 | 2.394052e-58 | -8.615850e-47 |
| Msa0322830 | Msa0843640 | 0.835992 | 1.214681e-56 | -8.615850e-47 |
| Msa0322840 | Msa0843640 | 0.824224 | 9.063427e-54 | -8.615850e-47 |
| Msa0322860 | Msa0843640 | 0.820528 | 6.541052e-53 | -8.615850e-47 |
| Msa0323610 | Msa0843640 | 0.812269 | 4.616455e-51 | -8.615850e-47 |
| Msa0331540 | Msa0843640 | 0.801060 | 1.075782e-48 | -8.615850e-47 |
| Msa0362780 | Msa0843640 | 0.810579 | 1.074708e-50 | -8.615850e-47 |
| Msa0503580 | Msa0843640 | 0.812626 | 3.857256e-51 | -8.615850e-47 |
| Msa0509390 | Msa0843640 | 0.807951 | 3.933605e-50 | -8.615850e-47 |
| Msa0523940 | Msa0843640 | 0.801021 | 1.095736e-48 | -8.615850e-47 |
| Msa0524890 | Msa0843640 | -0.810281 | 1.245979e-50 | -8.615850e-47 |
| Msa0532300 | Msa0843640 | 0.801487 | 8.797487e-49 | -8.615850e-47 |
| Msa0581760 | Msa0843640 | 0.811593 | 6.479197e-51 | -8.615850e-47 |
| Msa0598460 | Msa0843640 | 0.808170 | 3.532571e-50 | -8.615850e-47 |
| Msa0843640 | Msa0853540 | 0.805232 | 1.474307e-49 | -8.615850e-47 |
| Msa0843640 | Msa0862100 | 0.807154 | 5.805697e-50 | -8.615850e-47 |
| Msa0843640 | Msa0870620 | 0.827655 | 1.387813e-54 | -8.615850e-47 |
| Msa0843640 | Msa0880140 | 0.818554 | 1.844574e-52 | -8.615850e-47 |
| Msa0843640 | Msa0885060 | 0.822773 | 1.979668e-53 | -8.615850e-47 |
| Msa0843640 | Msa0895790 | 0.809452 | 1.879401e-50 | -8.615850e-47 |
| Msa0843640 | Msa0941730 | 0.803918 | 2.772114e-49 | -8.615850e-47 |
| Msa0843640 | Msa0946320 | 0.822346 | 2.488311e-53 | -8.615850e-47 |
| Msa0843640 | Msa0999350 | 0.804377 | 2.223827e-49 | -8.615850e-47 |
| Msa0843640 | Msa0999360 | 0.816882 | 4.397042e-52 | -8.615850e-47 |
| Msa0843640 | Msa0999410 | 0.805577 | 1.247958e-49 | -8.615850e-47 |
| Msa0843640 | Msa1003030 | 0.800003 | 1.767298e-48 | -8.615850e-47 |
| Msa0843640 | Msa1033560 | 0.800384 | 1.478289e-48 | -8.615850e-47 |
| Msa0843640 | Msa1105890 | 0.804843 | 1.778426e-49 | -8.615850e-47 |
| Msa0843640 | Msa1199220 | 0.813818 | 2.111620e-51 | -8.615850e-47 |
| Msa0843640 | Msa1222970 | 0.805703 | 1.174591e-49 | -8.615850e-47 |
| Msa0843640 | Msa1228190 | 0.804850 | 1.772103e-49 | -8.615850e-47 |
| Msa0843640 | Msa1228610 | 0.807085 | 6.005441e-50 | -8.615850e-47 |
| Msa0843640 | Msa1238930 | 0.829397 | 5.266971e-55 | -8.615850e-47 |
| Msa0843640 | Msa1264020 | 0.812405 | 4.310404e-51 | -8.615850e-47 |
| Msa0843640 | Msa1271260 | 0.824685 | 7.058269e-54 | -8.615850e-47 |
| Msa0843640 | Msa1300490 | 0.804473 | 2.124142e-49 | -8.615850e-47 |
| Msa0843640 | Msa1308380 | 0.801629 | 8.229329e-49 | -8.615850e-47 |
| Msa0843640 | Msa1367080 | 0.807344 | 5.291530e-50 | -8.615850e-47 |
| Msa0843640 | Msa1378770 | 0.814660 | 1.375858e-51 | -8.615850e-47 |
| Msa0843640 | Msa1408870 | 0.811780 | 5.900432e-51 | -8.615850e-47 |
| Msa0843640 | Msa1411070 | 0.816517 | 5.309881e-52 | -8.615850e-47 |
| Msa0843640 | Msa1420060 | 0.835871 | 1.303906e-56 | -8.615850e-47 |
| Msa0843640 | Msa1423990 | 0.800147 | 1.651556e-48 | -8.615850e-47 |
| Msa0843640 | Msa1424690 | 0.839927 | 1.181830e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0843640 | MtrunA17_Chr5g0414301 | 64.194 | 391 | 69 | 5 | 24 | 390 | 226 | 569 | 9.26e-149 | 434 |
| Msa0843640 | MtrunA17_Chr5g0414211 | 54.937 | 395 | 115 | 4 | 41 | 386 | 7 | 387 | 4.64e-121 | 358 |
| Msa0843640 | MtrunA17_Chr5g0415471 | 45.536 | 448 | 152 | 7 | 24 | 398 | 677 | 1105 | 5.32e-101 | 325 |
| Msa0843640 | MtrunA17_Chr5g0414311 | 44.470 | 434 | 150 | 5 | 28 | 388 | 683 | 1098 | 1.08e-99 | 321 |
| Msa0843640 | MtrunA17_Chr3g0087301 | 46.259 | 441 | 148 | 7 | 23 | 389 | 653 | 1078 | 4.52e-97 | 313 |
| Msa0843640 | MtrunA17_Chr5g0414181 | 55.352 | 327 | 126 | 6 | 18 | 340 | 659 | 969 | 2.15e-91 | 296 |
| Msa0843640 | MtrunA17_Chr5g0414161 | 58.984 | 256 | 90 | 3 | 24 | 279 | 159 | 399 | 1.55e-88 | 275 |
| Msa0843640 | MtrunA17_Chr5g0414201 | 55.245 | 286 | 113 | 3 | 24 | 309 | 669 | 939 | 8.63e-82 | 270 |
| Msa0843640 | MtrunA17_Chr5g0417251 | 56.540 | 237 | 85 | 4 | 24 | 258 | 438 | 658 | 1.11e-67 | 227 |
| Msa0843640 | MtrunA17_Chr5g0413811 | 56.332 | 229 | 64 | 5 | 23 | 220 | 441 | 664 | 2.20e-62 | 213 |
| Msa0843640 | MtrunA17_Chr5g0413811 | 72.034 | 118 | 33 | 0 | 271 | 388 | 549 | 666 | 2.55e-37 | 144 |
| Msa0843640 | MtrunA17_Chr7g0244231 | 39.891 | 366 | 196 | 11 | 28 | 389 | 660 | 1005 | 2.83e-55 | 197 |
| Msa0843640 | MtrunA17_Chr5g0430341 | 39.722 | 360 | 170 | 11 | 28 | 385 | 212 | 526 | 1.65e-52 | 184 |
| Msa0843640 | MtrunA17_Chr5g0430721 | 37.637 | 364 | 204 | 11 | 28 | 388 | 708 | 1051 | 2.36e-52 | 189 |
| Msa0843640 | MtrunA17_Chr1g0155991 | 40.274 | 365 | 193 | 10 | 28 | 388 | 665 | 1008 | 2.62e-52 | 188 |
| Msa0843640 | MtrunA17_Chr6g0468201 | 31.847 | 471 | 221 | 13 | 28 | 420 | 266 | 714 | 2.32e-51 | 184 |
| Msa0843640 | MtrunA17_Chr3g0123111 | 30.562 | 445 | 203 | 11 | 28 | 385 | 660 | 1085 | 2.50e-50 | 183 |
| Msa0843640 | MtrunA17_Chr5g0430291 | 38.798 | 366 | 201 | 11 | 28 | 389 | 668 | 1014 | 4.04e-50 | 182 |
| Msa0843640 | MtrunA17_Chr1g0155321 | 37.602 | 367 | 202 | 11 | 28 | 389 | 663 | 1007 | 8.58e-50 | 181 |
| Msa0843640 | MtrunA17_Chr4g0027251 | 35.949 | 395 | 188 | 12 | 28 | 385 | 671 | 1037 | 2.40e-49 | 180 |
| Msa0843640 | MtrunA17_Chr6g0470011 | 31.924 | 473 | 209 | 14 | 28 | 405 | 665 | 1119 | 2.04e-48 | 177 |
| Msa0843640 | MtrunA17_Chr5g0415481 | 47.826 | 207 | 97 | 2 | 24 | 230 | 243 | 438 | 9.17e-48 | 169 |
| Msa0843640 | MtrunA17_Chr6g0468121 | 33.565 | 432 | 193 | 11 | 28 | 385 | 662 | 1073 | 1.86e-47 | 174 |
| Msa0843640 | MtrunA17_Chr5g0430641 | 38.056 | 360 | 200 | 10 | 28 | 385 | 668 | 1006 | 3.21e-47 | 174 |
| Msa0843640 | MtrunA17_Chr6g0470001 | 32.883 | 444 | 198 | 15 | 28 | 389 | 272 | 697 | 6.33e-47 | 171 |
| Msa0843640 | MtrunA17_Chr5g0430141 | 37.500 | 368 | 202 | 12 | 28 | 389 | 670 | 1015 | 1.27e-46 | 172 |
| Msa0843640 | MtrunA17_Chr5g0430581 | 37.569 | 362 | 175 | 11 | 28 | 385 | 661 | 975 | 1.33e-46 | 172 |
| Msa0843640 | MtrunA17_Chr6g0468021 | 33.412 | 422 | 212 | 16 | 28 | 388 | 659 | 1072 | 1.84e-46 | 171 |
| Msa0843640 | MtrunA17_Chr5g0430441 | 37.260 | 365 | 180 | 10 | 28 | 389 | 668 | 986 | 2.52e-46 | 171 |
| Msa0843640 | MtrunA17_Chr5g0430511 | 36.512 | 367 | 205 | 11 | 28 | 391 | 669 | 1010 | 4.39e-46 | 170 |
| Msa0843640 | MtrunA17_Chr6g0468381 | 30.562 | 445 | 204 | 11 | 28 | 385 | 78 | 504 | 4.82e-46 | 167 |
| Msa0843640 | MtrunA17_Chr5g0431051 | 37.396 | 361 | 177 | 10 | 28 | 385 | 670 | 984 | 7.54e-46 | 169 |
| Msa0843640 | MtrunA17_Chr6g0468101 | 31.250 | 448 | 197 | 12 | 28 | 385 | 622 | 1048 | 1.80e-45 | 169 |
| Msa0843640 | MtrunA17_Chr5g0430621 | 37.265 | 373 | 192 | 11 | 28 | 388 | 667 | 1009 | 2.82e-45 | 168 |
| Msa0843640 | MtrunA17_Chr5g0429961 | 36.915 | 363 | 184 | 10 | 28 | 389 | 665 | 983 | 7.73e-45 | 167 |
| Msa0843640 | MtrunA17_Chr6g0470081 | 30.544 | 478 | 232 | 15 | 28 | 423 | 665 | 1124 | 8.42e-45 | 167 |
| Msa0843640 | MtrunA17_Chr3g0085931 | 30.081 | 492 | 228 | 13 | 28 | 421 | 663 | 1136 | 8.95e-45 | 167 |
| Msa0843640 | MtrunA17_Chr6g0468451 | 29.913 | 458 | 206 | 11 | 28 | 389 | 661 | 1099 | 1.03e-43 | 164 |
| Msa0843640 | MtrunA17_Chr8g0351811 | 31.729 | 457 | 200 | 13 | 28 | 392 | 185 | 621 | 2.27e-42 | 158 |
| Msa0843640 | MtrunA17_Chr4g0071011 | 36.364 | 363 | 202 | 13 | 28 | 385 | 159 | 497 | 1.34e-41 | 154 |
| Msa0843640 | MtrunA17_Chr6g0468151 | 30.926 | 443 | 209 | 9 | 28 | 391 | 667 | 1091 | 1.40e-41 | 157 |
| Msa0843640 | MtrunA17_Chr6g0468271 | 32.488 | 434 | 213 | 14 | 28 | 385 | 658 | 1087 | 1.60e-41 | 157 |
| Msa0843640 | MtrunA17_Chr6g0468341 | 30.505 | 436 | 195 | 12 | 40 | 385 | 481 | 898 | 6.82e-40 | 152 |
| Msa0843640 | MtrunA17_Chr6g0468251 | 29.302 | 430 | 205 | 10 | 39 | 388 | 26 | 436 | 5.33e-39 | 146 |
| Msa0843640 | MtrunA17_Chr5g0430901 | 36.826 | 334 | 188 | 10 | 28 | 359 | 549 | 861 | 1.95e-38 | 148 |
| Msa0843640 | MtrunA17_Chr5g0429951 | 36.685 | 368 | 182 | 13 | 28 | 389 | 669 | 991 | 7.44e-38 | 146 |
| Msa0843640 | MtrunA17_Chr6g0470021 | 34.195 | 348 | 190 | 12 | 25 | 367 | 552 | 865 | 1.38e-35 | 139 |
| Msa0843640 | MtrunA17_Chr2g0316291 | 30.435 | 414 | 212 | 15 | 28 | 385 | 689 | 1082 | 3.31e-33 | 132 |
| Msa0843640 | MtrunA17_Chr5g0415511 | 56.296 | 135 | 58 | 1 | 256 | 389 | 562 | 696 | 2.21e-32 | 129 |
| Msa0843640 | MtrunA17_Chr5g0410161 | 29.252 | 441 | 216 | 14 | 28 | 386 | 805 | 1231 | 6.12e-32 | 129 |
| Msa0843640 | MtrunA17_Chr6g0456131 | 30.526 | 380 | 220 | 13 | 28 | 387 | 686 | 1041 | 1.56e-30 | 124 |
| Msa0843640 | MtrunA17_Chr3g0092261 | 30.499 | 341 | 194 | 14 | 41 | 362 | 746 | 1062 | 5.12e-30 | 123 |
| Msa0843640 | MtrunA17_Chr3g0089211 | 32.288 | 319 | 197 | 12 | 40 | 352 | 748 | 1053 | 2.97e-29 | 120 |
| Msa0843640 | MtrunA17_Chr5g0410481 | 28.182 | 440 | 222 | 13 | 28 | 388 | 647 | 1071 | 3.14e-29 | 120 |
| Msa0843640 | MtrunA17_Chr3g0086091 | 29.614 | 466 | 215 | 15 | 28 | 385 | 485 | 945 | 1.61e-28 | 118 |
| Msa0843640 | MtrunA17_Chr3g0089421 | 31.875 | 320 | 198 | 13 | 40 | 352 | 703 | 1009 | 1.97e-28 | 118 |
| Msa0843640 | MtrunA17_Chr3g0080871 | 30.935 | 417 | 245 | 14 | 16 | 410 | 663 | 1058 | 2.29e-28 | 118 |
| Msa0843640 | MtrunA17_Chr3g0092241 | 30.663 | 362 | 205 | 15 | 23 | 362 | 681 | 1018 | 4.45e-28 | 117 |
| Msa0843640 | MtrunA17_Chr3g0089471 | 30.691 | 391 | 220 | 16 | 40 | 396 | 749 | 1122 | 3.21e-27 | 115 |
| Msa0843640 | MtrunA17_Chr3g0089651 | 30.263 | 380 | 212 | 17 | 40 | 396 | 705 | 1054 | 6.00e-27 | 114 |
| Msa0843640 | MtrunA17_Chr3g0089591 | 30.273 | 403 | 230 | 16 | 28 | 396 | 740 | 1125 | 6.23e-27 | 114 |
| Msa0843640 | MtrunA17_Chr5g0410351 | 26.712 | 438 | 229 | 12 | 28 | 386 | 658 | 1082 | 1.98e-26 | 112 |
| Msa0843640 | MtrunA17_Chr2g0309721 | 27.685 | 419 | 250 | 14 | 23 | 405 | 678 | 1079 | 4.11e-26 | 111 |
| Msa0843640 | MtrunA17_Chr3g0086221 | 31.680 | 363 | 205 | 14 | 28 | 367 | 673 | 1015 | 4.51e-26 | 111 |
| Msa0843640 | MtrunA17_Chr3g0085801 | 30.976 | 410 | 210 | 17 | 28 | 385 | 654 | 1042 | 1.24e-25 | 110 |
| Msa0843640 | MtrunA17_Chr3g0090691 | 28.395 | 405 | 236 | 17 | 28 | 398 | 690 | 1074 | 1.44e-25 | 110 |
| Msa0843640 | MtrunA17_Chr3g0083641 | 31.421 | 366 | 207 | 13 | 28 | 368 | 663 | 1009 | 1.45e-25 | 110 |
| Msa0843640 | MtrunA17_Chr3g0086071 | 30.748 | 361 | 208 | 13 | 28 | 367 | 294 | 633 | 3.71e-25 | 108 |
| Msa0843640 | MtrunA17_Chr3g0083751 | 32.153 | 367 | 203 | 14 | 28 | 368 | 692 | 1038 | 4.39e-25 | 108 |
| Msa0843640 | MtrunA17_Chr3g0087581 | 30.579 | 363 | 208 | 12 | 28 | 367 | 675 | 1016 | 4.83e-25 | 108 |
| Msa0843640 | MtrunA17_Chr6g0467961 | 35.814 | 215 | 115 | 8 | 28 | 239 | 659 | 853 | 8.82e-25 | 107 |
| Msa0843640 | MtrunA17_Chr3g0089811 | 31.548 | 336 | 200 | 15 | 40 | 362 | 701 | 1019 | 1.07e-24 | 107 |
| Msa0843640 | MtrunA17_Chr3g0084971 | 32.181 | 376 | 211 | 14 | 28 | 366 | 679 | 1047 | 1.74e-24 | 106 |
| Msa0843640 | MtrunA17_Chr3g0084971 | 30.645 | 310 | 157 | 16 | 123 | 388 | 945 | 1240 | 3.21e-11 | 65.9 |
| Msa0843640 | MtrunA17_Chr3g0089251 | 32.209 | 326 | 189 | 14 | 40 | 352 | 730 | 1036 | 2.10e-24 | 106 |
| Msa0843640 | MtrunA17_Chr6g0467921 | 31.228 | 285 | 111 | 5 | 189 | 389 | 22 | 305 | 2.48e-24 | 103 |
| Msa0843640 | MtrunA17_Chr3g0089761 | 30.650 | 323 | 197 | 12 | 40 | 352 | 701 | 1006 | 4.87e-24 | 105 |
| Msa0843640 | MtrunA17_Chr6g0456121 | 30.081 | 369 | 200 | 13 | 28 | 388 | 662 | 980 | 8.45e-24 | 104 |
| Msa0843640 | MtrunA17_Chr3g0089871 | 32.628 | 331 | 166 | 15 | 40 | 352 | 704 | 995 | 9.17e-24 | 104 |
| Msa0843640 | MtrunA17_Chr8g0338861 | 29.874 | 318 | 171 | 9 | 100 | 385 | 369 | 666 | 1.04e-23 | 103 |
| Msa0843640 | MtrunA17_Chr3g0089441 | 30.655 | 336 | 203 | 16 | 40 | 362 | 207 | 525 | 1.04e-23 | 103 |
| Msa0843640 | MtrunA17_Chr3g0089541 | 30.588 | 340 | 213 | 14 | 23 | 352 | 684 | 1010 | 1.42e-23 | 103 |
| Msa0843640 | MtrunA17_Chr3g0084811 | 30.352 | 369 | 197 | 15 | 26 | 362 | 836 | 1176 | 2.09e-23 | 103 |
| Msa0843640 | MtrunA17_Chr8g0352211 | 28.889 | 315 | 175 | 11 | 101 | 385 | 1661 | 1956 | 3.59e-23 | 102 |
| Msa0843640 | MtrunA17_Chr4g0008461 | 29.383 | 405 | 243 | 13 | 28 | 410 | 671 | 1054 | 3.60e-23 | 102 |
| Msa0843640 | MtrunA17_Chr8g0352861 | 32.344 | 337 | 197 | 16 | 22 | 350 | 694 | 1007 | 3.68e-23 | 102 |
| Msa0843640 | MtrunA17_Chr8g0352861 | 33.813 | 278 | 139 | 13 | 123 | 386 | 988 | 1234 | 4.45e-17 | 84.0 |
| Msa0843640 | MtrunA17_Chr3g0089781 | 31.148 | 305 | 191 | 14 | 40 | 337 | 701 | 993 | 5.02e-23 | 102 |
| Msa0843640 | MtrunA17_Chr6g0468131 | 27.671 | 365 | 171 | 7 | 103 | 389 | 1 | 350 | 5.06e-23 | 99.8 |
| Msa0843640 | MtrunA17_Chr3g0083621 | 30.978 | 368 | 205 | 14 | 28 | 368 | 698 | 1043 | 6.87e-23 | 101 |
| Msa0843640 | MtrunA17_Chr3g0091971 | 30.343 | 379 | 222 | 13 | 18 | 368 | 607 | 971 | 9.42e-23 | 101 |
| Msa0843640 | MtrunA17_Chr3g0091061 | 30.395 | 329 | 204 | 13 | 28 | 347 | 690 | 1002 | 9.46e-23 | 101 |
| Msa0843640 | MtrunA17_Chr4g0025391 | 27.342 | 395 | 243 | 13 | 41 | 405 | 700 | 1080 | 1.08e-22 | 101 |
| Msa0843640 | MtrunA17_Chr3g0083591 | 28.713 | 404 | 239 | 13 | 16 | 396 | 640 | 1017 | 1.36e-22 | 100 |
| Msa0843640 | MtrunA17_Chr3g0085651 | 29.412 | 408 | 199 | 16 | 28 | 369 | 684 | 1068 | 1.85e-22 | 100 |
| Msa0843640 | MtrunA17_Chr8g0356251 | 29.351 | 385 | 223 | 14 | 16 | 368 | 701 | 1068 | 3.79e-22 | 99.8 |
| Msa0843640 | MtrunA17_Chr3g0089991 | 29.874 | 318 | 187 | 13 | 40 | 352 | 705 | 991 | 4.77e-22 | 99.4 |
| Msa0843640 | MtrunA17_Chr6g0468261 | 31.879 | 298 | 181 | 8 | 118 | 402 | 67 | 355 | 1.28e-21 | 95.9 |
| Msa0843640 | MtrunA17_Chr6g0468261 | 30.479 | 292 | 160 | 12 | 111 | 390 | 3 | 263 | 6.50e-15 | 75.9 |
| Msa0843640 | MtrunA17_Chr3g0090431 | 29.446 | 343 | 176 | 16 | 40 | 352 | 573 | 879 | 1.71e-21 | 97.4 |
| Msa0843640 | MtrunA17_Chr3g0091081 | 30.061 | 326 | 191 | 14 | 40 | 347 | 700 | 1006 | 1.83e-21 | 97.4 |
| Msa0843640 | MtrunA17_Chr2g0282991 | 28.738 | 428 | 219 | 17 | 28 | 386 | 684 | 1094 | 2.03e-21 | 97.4 |
| Msa0843640 | MtrunA17_Chr2g0282991 | 30.357 | 336 | 189 | 13 | 79 | 389 | 929 | 1244 | 1.08e-15 | 79.7 |
| Msa0843640 | MtrunA17_Chr3g0113791 | 27.107 | 439 | 232 | 13 | 28 | 385 | 672 | 1103 | 2.07e-21 | 97.4 |
| Msa0843640 | MtrunA17_Chr3g0086621 | 26.998 | 463 | 228 | 14 | 28 | 385 | 674 | 1131 | 2.67e-21 | 97.1 |
| Msa0843640 | MtrunA17_Chr7g0257541 | 31.699 | 306 | 179 | 11 | 90 | 388 | 578 | 860 | 2.81e-21 | 96.7 |
| Msa0843640 | MtrunA17_Chr3g0084031 | 29.226 | 349 | 191 | 13 | 28 | 347 | 691 | 1012 | 2.89e-21 | 97.1 |
| Msa0843640 | MtrunA17_Chr1g0164581 | 27.400 | 427 | 216 | 15 | 18 | 368 | 663 | 1071 | 4.39e-21 | 96.3 |
| Msa0843640 | MtrunA17_Chr1g0164581 | 30.284 | 317 | 172 | 14 | 112 | 385 | 902 | 1212 | 2.28e-12 | 69.3 |
| Msa0843640 | MtrunA17_Chr3g0082131 | 27.400 | 427 | 216 | 15 | 18 | 368 | 687 | 1095 | 4.45e-21 | 96.3 |
| Msa0843640 | MtrunA17_Chr3g0082131 | 32.203 | 295 | 160 | 15 | 112 | 385 | 926 | 1201 | 6.81e-16 | 80.5 |
| Msa0843640 | MtrunA17_Chr3g0083681 | 30.028 | 363 | 214 | 12 | 28 | 368 | 664 | 1008 | 5.83e-21 | 95.9 |
| Msa0843640 | MtrunA17_Chr3g0087841 | 30.476 | 315 | 196 | 11 | 40 | 343 | 701 | 1003 | 8.11e-21 | 95.5 |
| Msa0843640 | MtrunA17_Chr3g0090371 | 30.275 | 327 | 195 | 12 | 40 | 352 | 700 | 1007 | 3.20e-20 | 93.6 |
| Msa0843640 | MtrunA17_Chr5g0410261 | 29.024 | 379 | 203 | 15 | 28 | 364 | 690 | 1044 | 4.18e-20 | 93.2 |
| Msa0843640 | MtrunA17_Chr3g0091121 | 29.211 | 380 | 204 | 18 | 28 | 361 | 300 | 660 | 6.83e-20 | 92.4 |
| Msa0843640 | MtrunA17_Chr1g0169901 | 25.984 | 381 | 233 | 10 | 28 | 373 | 680 | 1046 | 9.77e-20 | 92.0 |
| Msa0843640 | MtrunA17_Chr3g0085091 | 29.268 | 369 | 200 | 14 | 28 | 374 | 682 | 1011 | 1.26e-19 | 91.7 |
| Msa0843640 | MtrunA17_Chr8g0338261 | 29.530 | 298 | 175 | 6 | 113 | 388 | 647 | 931 | 1.39e-19 | 91.7 |
| Msa0843640 | MtrunA17_Chr3g0090141 | 29.283 | 321 | 206 | 11 | 40 | 352 | 701 | 1008 | 1.70e-19 | 91.7 |
| Msa0843640 | MtrunA17_Chr3g0090141 | 29.562 | 274 | 170 | 9 | 123 | 389 | 988 | 1245 | 2.60e-11 | 65.9 |
| Msa0843640 | MtrunA17_Chr3g0082791 | 28.986 | 345 | 191 | 12 | 28 | 347 | 690 | 1005 | 1.82e-19 | 91.3 |
| Msa0843640 | MtrunA17_Chr2g0299151 | 27.553 | 421 | 225 | 15 | 22 | 373 | 673 | 1082 | 1.90e-19 | 91.3 |
| Msa0843640 | MtrunA17_Chr3g0086161 | 29.781 | 366 | 207 | 14 | 28 | 367 | 674 | 1015 | 2.03e-19 | 91.3 |
| Msa0843640 | MtrunA17_Chr3g0086181 | 36.530 | 219 | 114 | 10 | 28 | 242 | 674 | 871 | 2.43e-19 | 90.9 |
| Msa0843640 | MtrunA17_Chr5g0410301 | 29.969 | 327 | 189 | 12 | 28 | 344 | 659 | 955 | 3.07e-19 | 90.5 |
| Msa0843640 | MtrunA17_Chr3g0089601 | 33.641 | 217 | 119 | 12 | 40 | 247 | 699 | 899 | 3.86e-19 | 90.1 |
| Msa0843640 | MtrunA17_Chr6g0468331 | 34.975 | 203 | 120 | 6 | 189 | 385 | 475 | 671 | 4.05e-19 | 90.1 |
| Msa0843640 | MtrunA17_Chr7g0257201 | 31.190 | 311 | 179 | 12 | 85 | 388 | 577 | 859 | 4.32e-19 | 90.1 |
| Msa0843640 | MtrunA17_Chr3g0090651 | 28.746 | 327 | 191 | 13 | 28 | 348 | 690 | 980 | 6.51e-19 | 89.7 |
| Msa0843640 | MtrunA17_Chr3g0089961 | 31.429 | 245 | 139 | 11 | 28 | 260 | 692 | 919 | 6.51e-19 | 89.4 |
| Msa0843640 | MtrunA17_Chr3g0084051 | 26.201 | 458 | 232 | 15 | 28 | 385 | 689 | 1140 | 1.29e-18 | 88.6 |
| Msa0843640 | MtrunA17_Chr8g0348931 | 27.869 | 366 | 217 | 16 | 41 | 389 | 708 | 1043 | 1.37e-18 | 88.6 |
| Msa0843640 | MtrunA17_Chr5g0430951 | 36.000 | 225 | 119 | 8 | 28 | 247 | 666 | 870 | 1.40e-18 | 88.6 |
| Msa0843640 | MtrunA17_Chr2g0299091 | 31.613 | 310 | 176 | 13 | 22 | 319 | 663 | 948 | 1.83e-18 | 88.2 |
| Msa0843640 | MtrunA17_Chr3g0085331 | 27.189 | 434 | 218 | 13 | 28 | 367 | 698 | 1127 | 2.10e-18 | 88.2 |
| Msa0843640 | MtrunA17_Chr3g0085501 | 26.897 | 435 | 215 | 14 | 28 | 367 | 698 | 1124 | 4.59e-18 | 87.0 |
| Msa0843640 | MtrunA17_Chr3g0085501 | 30.112 | 269 | 156 | 11 | 123 | 363 | 932 | 1196 | 7.17e-11 | 64.7 |
| Msa0843640 | MtrunA17_Chr7g0218941 | 27.778 | 324 | 192 | 10 | 95 | 388 | 653 | 964 | 5.52e-18 | 86.7 |
| Msa0843640 | MtrunA17_Chr3g0085131 | 30.303 | 363 | 196 | 17 | 28 | 374 | 676 | 997 | 6.23e-18 | 86.7 |
| Msa0843640 | MtrunA17_Chr3g0085521 | 28.571 | 364 | 196 | 15 | 28 | 353 | 671 | 1008 | 7.33e-18 | 86.3 |
| Msa0843640 | MtrunA17_Chr1g0147141 | 27.545 | 334 | 211 | 14 | 46 | 367 | 706 | 1020 | 8.27e-18 | 86.3 |
| Msa0843640 | MtrunA17_Chr3g0085751 | 30.056 | 356 | 214 | 16 | 28 | 374 | 674 | 1003 | 8.39e-18 | 86.3 |
| Msa0843640 | MtrunA17_Chr3g0085161 | 28.977 | 352 | 210 | 14 | 28 | 353 | 540 | 877 | 9.34e-18 | 85.9 |
| Msa0843640 | MtrunA17_Chr6g0468361 | 34.409 | 186 | 101 | 7 | 28 | 209 | 270 | 438 | 9.71e-18 | 85.1 |
| Msa0843640 | MtrunA17_Chr3g0085451 | 29.296 | 355 | 226 | 13 | 28 | 367 | 660 | 1004 | 1.03e-17 | 85.9 |
| Msa0843640 | MtrunA17_Chr5g0433771 | 33.574 | 277 | 153 | 10 | 120 | 389 | 600 | 852 | 1.20e-17 | 85.5 |
| Msa0843640 | MtrunA17_Chr3g0085481 | 28.485 | 330 | 181 | 11 | 28 | 313 | 23 | 341 | 1.57e-17 | 84.0 |
| Msa0843640 | MtrunA17_Chr3g0085561 | 31.214 | 346 | 184 | 17 | 28 | 368 | 674 | 970 | 1.59e-17 | 85.1 |
| Msa0843640 | MtrunA17_Chr2g0299121 | 31.529 | 314 | 172 | 15 | 22 | 317 | 689 | 977 | 1.84e-17 | 85.1 |
| Msa0843640 | MtrunA17_Chr3g0085701 | 29.745 | 353 | 213 | 15 | 31 | 374 | 486 | 812 | 2.04e-17 | 85.1 |
| Msa0843640 | MtrunA17_Chr3g0087731 | 26.202 | 416 | 241 | 14 | 28 | 389 | 477 | 880 | 2.63e-17 | 84.7 |
| Msa0843640 | MtrunA17_Chr3g0087701 | 32.133 | 361 | 178 | 16 | 28 | 343 | 678 | 1016 | 7.13e-17 | 83.2 |
| Msa0843640 | MtrunA17_Chr3g0089921 | 30.038 | 263 | 169 | 10 | 90 | 347 | 1 | 253 | 8.39e-17 | 82.4 |
| Msa0843640 | MtrunA17_Chr3g0085111 | 29.330 | 358 | 193 | 16 | 31 | 353 | 680 | 1012 | 1.41e-16 | 82.4 |
| Msa0843640 | MtrunA17_Chr3g0085431 | 35.593 | 236 | 123 | 12 | 28 | 255 | 287 | 501 | 1.70e-16 | 81.6 |
| Msa0843640 | MtrunA17_Chr3g0084081 | 29.945 | 364 | 182 | 16 | 28 | 343 | 689 | 1027 | 2.32e-16 | 81.6 |
| Msa0843640 | MtrunA17_Chr3g0113781 | 28.261 | 322 | 179 | 17 | 28 | 343 | 467 | 742 | 2.48e-16 | 81.3 |
| Msa0843640 | MtrunA17_Chr8g0346831 | 28.571 | 294 | 170 | 9 | 98 | 364 | 658 | 938 | 2.59e-16 | 81.6 |
| Msa0843640 | MtrunA17_Chr3g0090401 | 28.481 | 316 | 203 | 12 | 46 | 352 | 898 | 1199 | 2.62e-16 | 81.6 |
| Msa0843640 | MtrunA17_Chr8g0355411 | 28.333 | 300 | 157 | 8 | 96 | 388 | 591 | 839 | 3.30e-16 | 81.3 |
| Msa0843640 | MtrunA17_Chr3g0086151 | 32.759 | 232 | 132 | 11 | 28 | 256 | 674 | 884 | 3.55e-16 | 80.9 |
| Msa0843640 | MtrunA17_Chr3g0087541 | 29.923 | 391 | 198 | 20 | 28 | 366 | 693 | 1059 | 3.64e-16 | 81.3 |
| Msa0843640 | MtrunA17_Chr3g0078351 | 29.464 | 336 | 196 | 13 | 60 | 369 | 1 | 321 | 5.31e-16 | 79.7 |
| Msa0843640 | MtrunA17_Chr3g0085551 | 32.075 | 212 | 104 | 8 | 28 | 226 | 566 | 750 | 7.29e-16 | 80.1 |
| Msa0843640 | MtrunA17_Chr7g0257221 | 29.245 | 318 | 176 | 9 | 85 | 388 | 577 | 859 | 8.12e-16 | 80.1 |
| Msa0843640 | MtrunA17_Chr3g0084061 | 29.248 | 359 | 218 | 14 | 28 | 367 | 687 | 1028 | 9.07e-16 | 80.1 |
| Msa0843640 | MtrunA17_Chr3g0091011 | 30.556 | 288 | 143 | 12 | 28 | 296 | 658 | 907 | 9.31e-16 | 79.7 |
| Msa0843640 | MtrunA17_Chr5g0410401 | 30.116 | 259 | 151 | 10 | 28 | 269 | 534 | 779 | 1.23e-15 | 79.3 |
| Msa0843640 | MtrunA17_Chr6g0467911 | 47.273 | 110 | 53 | 5 | 28 | 134 | 665 | 772 | 1.41e-15 | 79.0 |
| Msa0843640 | MtrunA17_Chr8g0352831 | 27.073 | 410 | 211 | 16 | 28 | 368 | 707 | 1097 | 1.83e-15 | 79.0 |
| Msa0843640 | MtrunA17_Chr8g0352831 | 30.645 | 248 | 151 | 8 | 153 | 388 | 999 | 1237 | 1.77e-11 | 66.6 |
| Msa0843640 | MtrunA17_Chr3g0085471 | 30.063 | 316 | 164 | 11 | 123 | 385 | 962 | 1273 | 1.97e-15 | 79.0 |
| Msa0843640 | MtrunA17_Chr3g0085471 | 28.857 | 350 | 169 | 17 | 28 | 364 | 688 | 970 | 2.42e-15 | 78.6 |
| Msa0843640 | MtrunA17_Chr3g0085471 | 29.260 | 311 | 164 | 13 | 98 | 364 | 853 | 1151 | 6.39e-11 | 64.7 |
| Msa0843640 | MtrunA17_Chr1g0168901 | 30.100 | 299 | 174 | 10 | 18 | 293 | 648 | 934 | 2.05e-15 | 78.6 |
| Msa0843640 | MtrunA17_Chr3g0085171 | 28.919 | 370 | 188 | 17 | 28 | 353 | 666 | 1004 | 2.12e-15 | 79.0 |
| Msa0843640 | MtrunA17_Chr3g0083721 | 28.571 | 336 | 209 | 13 | 15 | 335 | 617 | 936 | 4.35e-15 | 77.8 |
| Msa0843640 | MtrunA17_Chr1g0189551 | 30.108 | 279 | 158 | 8 | 120 | 388 | 615 | 866 | 5.44e-15 | 77.4 |
| Msa0843640 | MtrunA17_Chr5g0446611 | 31.841 | 201 | 110 | 6 | 28 | 219 | 688 | 870 | 7.89e-15 | 77.0 |
| Msa0843640 | MtrunA17_Chr3g0089501 | 32.979 | 188 | 104 | 9 | 40 | 220 | 699 | 871 | 8.26e-15 | 76.6 |
| Msa0843640 | MtrunA17_Chr6g0471941 | 28.481 | 316 | 185 | 9 | 98 | 385 | 656 | 958 | 9.92e-15 | 76.6 |
| Msa0843640 | MtrunA17_Chr1g0164391 | 27.566 | 341 | 205 | 12 | 28 | 343 | 692 | 1015 | 1.39e-14 | 76.3 |
| Msa0843640 | MtrunA17_Chr7g0221481 | 33.951 | 162 | 103 | 3 | 28 | 188 | 685 | 843 | 1.72e-14 | 75.9 |
| Msa0843640 | MtrunA17_Chr3g0082311 | 27.536 | 345 | 213 | 11 | 16 | 343 | 679 | 1003 | 2.08e-14 | 75.5 |
| Msa0843640 | MtrunA17_Chr6g0484551 | 33.023 | 215 | 128 | 8 | 18 | 229 | 653 | 854 | 3.49e-14 | 74.7 |
| Msa0843640 | MtrunA17_Chr3g0085711 | 31.844 | 358 | 205 | 17 | 28 | 374 | 246 | 575 | 4.07e-14 | 74.3 |
| Msa0843640 | MtrunA17_Chr6g0482351 | 32.971 | 276 | 172 | 8 | 98 | 368 | 740 | 1007 | 4.21e-14 | 74.7 |
| Msa0843640 | MtrunA17_Chr6g0482351 | 31.494 | 308 | 149 | 12 | 116 | 368 | 845 | 1145 | 1.73e-11 | 66.6 |
| Msa0843640 | MtrunA17_Chr8g0338431 | 27.687 | 307 | 184 | 9 | 108 | 388 | 230 | 524 | 4.78e-14 | 73.9 |
| Msa0843640 | MtrunA17_Chr4g0010221 | 24.507 | 355 | 235 | 12 | 29 | 370 | 686 | 1020 | 1.11e-13 | 73.2 |
| Msa0843640 | MtrunA17_Chr4g0009781 | 27.246 | 345 | 211 | 13 | 29 | 356 | 688 | 1009 | 1.22e-13 | 73.2 |
| Msa0843640 | MtrunA17_Chr7g0248221 | 32.567 | 261 | 149 | 9 | 142 | 386 | 593 | 842 | 1.23e-13 | 73.2 |
| Msa0843640 | MtrunA17_Chr3g0086741 | 37.037 | 135 | 81 | 3 | 28 | 159 | 703 | 836 | 1.83e-13 | 72.4 |
| Msa0843640 | MtrunA17_Chr3g0084041 | 37.037 | 135 | 79 | 4 | 28 | 159 | 27 | 158 | 2.14e-13 | 68.9 |
| Msa0843640 | MtrunA17_Chr7g0257191 | 28.889 | 315 | 187 | 12 | 85 | 391 | 578 | 863 | 2.39e-13 | 72.4 |
| Msa0843640 | MtrunA17_Chr2g0309161 | 36.364 | 110 | 69 | 1 | 278 | 386 | 12 | 121 | 3.70e-13 | 66.2 |
| Msa0843640 | MtrunA17_Chr7g0248531 | 29.249 | 253 | 149 | 13 | 26 | 261 | 664 | 903 | 1.27e-12 | 70.1 |
| Msa0843640 | MtrunA17_Chr3g0082891 | 31.395 | 258 | 153 | 9 | 138 | 389 | 600 | 839 | 1.90e-12 | 69.3 |
| Msa0843640 | MtrunA17_Chr1g0164631 | 28.875 | 329 | 177 | 15 | 30 | 340 | 699 | 988 | 3.24e-12 | 68.6 |
| Msa0843640 | MtrunA17_Chr2g0299101 | 33.516 | 182 | 101 | 7 | 22 | 187 | 689 | 866 | 3.92e-12 | 68.6 |
| Msa0843640 | MtrunA17_Chr8g0382411 | 31.621 | 253 | 133 | 10 | 126 | 368 | 127 | 349 | 5.44e-12 | 67.4 |
| Msa0843640 | MtrunA17_Chr8g0338391 | 27.796 | 313 | 185 | 11 | 98 | 385 | 655 | 951 | 6.02e-12 | 67.8 |
| Msa0843640 | MtrunA17_Chr4g0010201 | 24.561 | 342 | 226 | 10 | 29 | 356 | 687 | 1010 | 7.35e-12 | 67.8 |
| Msa0843640 | MtrunA17_Chr3g0082351 | 26.421 | 299 | 185 | 10 | 18 | 297 | 679 | 961 | 9.86e-12 | 67.4 |
| Msa0843640 | MtrunA17_Chr3g0113801 | 27.970 | 404 | 222 | 20 | 37 | 385 | 54 | 443 | 1.08e-11 | 66.6 |
| Msa0843640 | MtrunA17_Chr3g0113511 | 27.792 | 403 | 224 | 18 | 37 | 385 | 18 | 407 | 1.20e-11 | 66.2 |
| Msa0843640 | MtrunA17_Chr3g0113741 | 27.970 | 404 | 222 | 20 | 37 | 385 | 18 | 407 | 1.34e-11 | 65.9 |
| Msa0843640 | MtrunA17_Chr7g0248441 | 38.739 | 111 | 67 | 1 | 284 | 393 | 87 | 197 | 1.58e-11 | 63.5 |
| Msa0843640 | MtrunA17_Chr1g0164611 | 28.255 | 361 | 215 | 16 | 40 | 374 | 713 | 1055 | 1.96e-11 | 66.2 |
| Msa0843640 | MtrunA17_Chr3g0085791 | 29.137 | 278 | 157 | 8 | 141 | 385 | 10 | 280 | 2.76e-11 | 63.9 |
| Msa0843640 | MtrunA17_Chr3g0082391 | 33.577 | 137 | 84 | 4 | 16 | 149 | 680 | 812 | 5.33e-11 | 64.7 |
| Msa0843640 | MtrunA17_Chr6g0482461 | 34.167 | 240 | 129 | 11 | 142 | 368 | 4 | 227 | 6.93e-11 | 64.3 |
| Msa0843640 | MtrunA17_Chr5g0415551 | 35.938 | 128 | 74 | 4 | 28 | 151 | 544 | 667 | 7.33e-11 | 64.3 |
| Msa0843640 | MtrunA17_Chr3g0089941 | 29.379 | 177 | 98 | 7 | 62 | 229 | 12 | 170 | 7.51e-11 | 61.6 |
| Msa0843640 | MtrunA17_Chr8g0363851 | 30.921 | 304 | 163 | 14 | 119 | 389 | 532 | 821 | 8.51e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0843640 | AT3G14470.1 | 30.513 | 390 | 203 | 18 | 18 | 386 | 682 | 1024 | 9.99e-24 | 104 |
| Msa0843640 | AT3G14470.2 | 30.513 | 390 | 203 | 18 | 18 | 386 | 682 | 1024 | 9.99e-24 | 104 |
| Msa0843640 | AT1G69550.1 | 34.231 | 260 | 155 | 11 | 119 | 367 | 954 | 1208 | 1.78e-14 | 76.3 |
| Msa0843640 | AT1G69550.1 | 29.394 | 330 | 173 | 12 | 95 | 367 | 739 | 1065 | 1.06e-12 | 70.9 |
| Msa0843640 | AT1G69550.1 | 30.943 | 265 | 154 | 9 | 97 | 356 | 981 | 1221 | 9.46e-12 | 67.8 |
| Msa0843640 | AT3G44480.2 | 33.333 | 204 | 111 | 6 | 195 | 393 | 727 | 910 | 1.83e-13 | 73.2 |
| Msa0843640 | AT3G44480.4 | 33.333 | 204 | 111 | 6 | 195 | 393 | 727 | 910 | 1.85e-13 | 73.2 |
| Msa0843640 | AT3G44480.1 | 33.333 | 204 | 111 | 6 | 195 | 393 | 727 | 910 | 1.85e-13 | 73.2 |
| Msa0843640 | AT3G44480.3 | 33.333 | 204 | 111 | 6 | 195 | 393 | 727 | 910 | 1.86e-13 | 73.2 |
| Msa0843640 | AT3G44480.5 | 33.333 | 204 | 111 | 6 | 195 | 393 | 727 | 910 | 1.86e-13 | 73.2 |
| Msa0843640 | AT3G25510.2 | 29.856 | 278 | 160 | 11 | 123 | 368 | 509 | 783 | 1.36e-12 | 70.5 |
| Msa0843640 | AT3G25510.2 | 29.845 | 258 | 165 | 10 | 121 | 368 | 555 | 806 | 5.19e-12 | 68.6 |
| Msa0843640 | AT3G25510.1 | 29.856 | 278 | 160 | 11 | 123 | 368 | 509 | 783 | 1.36e-12 | 70.5 |
| Msa0843640 | AT3G25510.1 | 29.845 | 258 | 165 | 10 | 121 | 368 | 555 | 806 | 5.19e-12 | 68.6 |
| Msa0843640 | AT5G44510.3 | 29.804 | 255 | 167 | 6 | 122 | 367 | 705 | 956 | 2.34e-12 | 69.7 |
| Msa0843640 | AT5G44510.1 | 29.804 | 255 | 167 | 6 | 122 | 367 | 705 | 956 | 2.37e-12 | 69.7 |
| Msa0843640 | AT5G44510.2 | 29.804 | 255 | 167 | 6 | 122 | 367 | 705 | 956 | 3.36e-12 | 69.3 |
| Msa0843640 | AT5G44510.4 | 29.804 | 255 | 167 | 6 | 122 | 367 | 705 | 956 | 3.37e-12 | 69.3 |
| Msa0843640 | AT3G04220.3 | 29.478 | 268 | 142 | 12 | 111 | 364 | 662 | 896 | 7.38e-12 | 68.2 |
| Msa0843640 | AT3G04220.1 | 29.864 | 221 | 119 | 9 | 152 | 364 | 675 | 867 | 3.22e-11 | 65.9 |
Find 118 sgRNAs with CRISPR-Local
Find 187 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCAATATTGCGAAGTTTA+AGG | 0.112375 | 5_4:-21355058 | None:intergenic |
| TCTTAAGGTATTGACAATTT+TGG | 0.168275 | 5_4:+21354710 | Msa0843640:CDS |
| TCTCACATTCAAACTCTTAA+AGG | 0.187322 | 5_4:+21355422 | Msa0843640:CDS |
| AGAATTAGAAATTGATGATT+TGG | 0.244080 | 5_4:+21354740 | Msa0843640:CDS |
| GATTCCTTTGGGTCCATTAC+TGG | 0.249071 | 5_4:+21356788 | Msa0843640:three_prime_UTR |
| TGAAGTCATCTTCCCTATAT+TGG | 0.249287 | 5_4:-21354287 | None:intergenic |
| GAATTAGAAATTGATGATTT+GGG | 0.269971 | 5_4:+21354741 | Msa0843640:CDS |
| TCTTTAAGTTGTTGGGTATA+AGG | 0.275600 | 5_4:-21354552 | Msa0843650:intron |
| AGTTGGAGAAACGGTGTAAA+AGG | 0.279977 | 5_4:+21355372 | Msa0843640:CDS |
| GAAGGACTAGACATCCATTC+TGG | 0.284715 | 5_4:-21354609 | Msa0843650:intron |
| CAAGGCAAGCCCAACAAATT+AGG | 0.285072 | 5_4:-21354948 | Msa0843650:five_prime_UTR |
| TCATGTTTACCTCCCAATAT+AGG | 0.288336 | 5_4:+21354274 | None:intergenic |
| CTTGAGAGATTGACGATTCA+AGG | 0.292446 | 5_4:+21354777 | Msa0843640:CDS |
| TTCAATATTGCGAAGTTTAA+GGG | 0.300871 | 5_4:-21355057 | None:intergenic |
| TTCTCTAGGAGTTCTAAAAT+TGG | 0.302456 | 5_4:+21354839 | Msa0843640:CDS |
| ATTAGGAAATATGATTCCTT+TGG | 0.306201 | 5_4:+21356776 | Msa0843640:three_prime_UTR |
| AGACATCCATTCTGGGAAAT+AGG | 0.309578 | 5_4:-21354601 | Msa0843650:intron |
| ACATCCTTACCAGACTCTTT+AGG | 0.323527 | 5_4:+21355233 | Msa0843640:CDS |
| GCAAGGGAAGAGGGTTCTTT+TGG | 0.325571 | 5_4:+21354338 | Msa0843640:CDS |
| CCTCGCACGGATTGAATTTG+TGG | 0.326153 | 5_4:-21356526 | None:intergenic |
| CCTTCCATCTCTCAAAGATA+TGG | 0.340467 | 5_4:+21354971 | Msa0843640:CDS |
| TTGCTCAGTAATAGAAGGTT+TGG | 0.345021 | 5_4:+21355148 | Msa0843640:CDS |
| ACGAAAATCAACAGAAGCTT+GGG | 0.362155 | 5_4:-21356744 | None:intergenic |
| GATAATTGCTCAGTAATAGA+AGG | 0.364157 | 5_4:+21355143 | Msa0843640:CDS |
| ATCCAACTCTTTAAGTTGTT+GGG | 0.373536 | 5_4:-21354559 | Msa0843650:intron |
| ATTACTGGTATAAGATTTGA+TGG | 0.378181 | 5_4:+21356803 | Msa0843640:three_prime_UTR |
| CATCCAACTCTTTAAGTTGT+TGG | 0.378443 | 5_4:-21354560 | Msa0843650:intron |
| GGAGAAACTACCTTCTCTTA+AGG | 0.380387 | 5_4:+21354695 | Msa0843640:CDS |
| TGACCTTGAATCATTATCAT+TGG | 0.383665 | 5_4:+21355193 | Msa0843640:CDS |
| AAGAAGTTGTCCTAATTTGT+TGG | 0.385494 | 5_4:+21354938 | Msa0843640:CDS |
| CTTGATAACCTTGACAGGTT+TGG | 0.395213 | 5_4:-21354870 | Msa0843650:CDS |
| TTAGGAAATATGATTCCTTT+GGG | 0.396456 | 5_4:+21356777 | Msa0843640:three_prime_UTR |
| GAAGTCATCTTCCCTATATT+GGG | 0.398653 | 5_4:-21354286 | None:intergenic |
| AGAAGTTGTCCTAATTTGTT+GGG | 0.405604 | 5_4:+21354939 | Msa0843640:CDS |
| AAAATTAGAAATTATTGAGT+TGG | 0.417729 | 5_4:+21354806 | Msa0843640:CDS |
| AAATTAGAAATTATTGAGTT+GGG | 0.425018 | 5_4:+21354807 | Msa0843640:CDS |
| CTAAGGTTTCCTAAAGAGTC+TGG | 0.425229 | 5_4:-21355242 | None:intergenic |
| CTGTTTACACATCCCACAAT+TGG | 0.428457 | 5_4:+21354674 | Msa0843640:CDS |
| TGCTCAGTAATAGAAGGTTT+GGG | 0.436076 | 5_4:+21355149 | Msa0843640:CDS |
| AATTCCATGTTCACTTTCCA+TGG | 0.439729 | 5_4:-21356697 | None:intergenic |
| CTAAGTTCAATTCATAAACT+TGG | 0.442260 | 5_4:+21355023 | Msa0843640:CDS |
| GATCACTTGGCAGAATAGAC+TGG | 0.442411 | 5_4:-21356916 | None:intergenic |
| CAGGTTCCTATTTCCCAGAA+TGG | 0.445442 | 5_4:+21354595 | Msa0843640:CDS |
| CCTCCCTTGATAACCTTGAC+AGG | 0.454248 | 5_4:-21354875 | Msa0843650:CDS |
| AAACGGTGTAAAAGGGAAAC+AGG | 0.454611 | 5_4:+21355380 | Msa0843640:CDS |
| CATGTTTACCTCCCAATATA+GGG | 0.454713 | 5_4:+21354275 | None:intergenic |
| TACGAAAATCAACAGAAGCT+TGG | 0.463304 | 5_4:-21356745 | None:intergenic |
| CAAACCTGTCAAGGTTATCA+AGG | 0.465183 | 5_4:+21354871 | Msa0843640:CDS |
| AAGAGTCTGGTAAGGATGTC+AGG | 0.467233 | 5_4:-21355229 | None:intergenic |
| AGGTTTGTTAGCATCCCATC+TGG | 0.478016 | 5_4:-21355095 | None:intergenic |
| GAAGGTAGTTTCTCCAATTG+TGG | 0.481141 | 5_4:-21354687 | Msa0843650:intron |
| AAGGACTAGACATCCATTCT+GGG | 0.482936 | 5_4:-21354608 | Msa0843650:intron |
| TCGGACAGTTATAAATGTAT+AGG | 0.483860 | 5_4:-21355277 | None:intergenic |
| ATCAAATCTTATACCAGTAA+TGG | 0.487005 | 5_4:-21356801 | None:intergenic |
| TTGGATGTGAAAGGATATAC+AGG | 0.487816 | 5_4:+21354576 | Msa0843640:CDS |
| AACTTCAATTCACTAACAAA+AGG | 0.489546 | 5_4:-21356950 | None:intergenic |
| ACTTTGAGCATGTATGTAGT+TGG | 0.492682 | 5_4:+21354316 | Msa0843640:CDS |
| TATGTAGTTGGCAAGGGAAG+AGG | 0.496603 | 5_4:+21354328 | Msa0843640:CDS |
| GGTTTCTCAACTTGATCACT+TGG | 0.499844 | 5_4:-21356929 | None:intergenic |
| TACCCAACAACTTAAAGAGT+TGG | 0.501394 | 5_4:+21354557 | Msa0843640:CDS |
| GTAAGCACGTGAAGAATTTG+TGG | 0.504242 | 5_4:+21354460 | Msa0843640:CDS |
| TTTCAAGTCTTGATAAGAGC+GGG | 0.505625 | 5_4:-21354914 | Msa0843650:five_prime_UTR |
| GTCTGTAAATGTATTAAAGA+AGG | 0.507142 | 5_4:-21354627 | Msa0843650:intron |
| CTGGAAAGGAAGAGCAGCCA+TGG | 0.509760 | 5_4:+21356680 | Msa0843640:three_prime_UTR |
| CATATGAATTGTTGTTCTAG+TGG | 0.511304 | 5_4:-21356626 | None:intergenic |
| ATAGGTCTTGAAGTGAACTA+AGG | 0.517447 | 5_4:-21355259 | None:intergenic |
| ATTCACAAATGAAACAGAAA+AGG | 0.519786 | 5_4:-21356982 | None:intergenic |
| AATTAAATTTGAAAGTAGAT+CGG | 0.522296 | 5_4:+21354373 | Msa0843640:CDS |
| GCTCCAATGATAATGATTCA+AGG | 0.525385 | 5_4:-21355196 | None:intergenic |
| GTTGGAGAAACGGTGTAAAA+GGG | 0.526473 | 5_4:+21355373 | Msa0843640:CDS |
| AAGGTAGTTTCTCCAATTGT+GGG | 0.528760 | 5_4:-21354686 | Msa0843650:intron |
| AAAGGGAAACAGGTGAGGAT+TGG | 0.535535 | 5_4:+21355390 | Msa0843640:CDS |
| CTTAAAGAGTTGGATGTGAA+AGG | 0.538519 | 5_4:+21354567 | Msa0843640:CDS |
| ACAAATTCTTCAGAGCAGAA+AGG | 0.541084 | 5_4:-21355331 | None:intergenic |
| GATAACAGACTCTGCTGGAA+AGG | 0.541585 | 5_4:+21356666 | Msa0843640:three_prime_UTR |
| TTAATACATTTACAGACGCT+AGG | 0.544589 | 5_4:+21354633 | Msa0843640:CDS |
| ATTAATTCCGTCTTTGACAA+GGG | 0.545842 | 5_4:+21356594 | Msa0843640:CDS |
| AATTAATTCCGTCTTTGACA+AGG | 0.546825 | 5_4:+21356593 | Msa0843640:CDS |
| TCTGGTAAGGATGTCAGGTT+CGG | 0.546885 | 5_4:-21355224 | None:intergenic |
| GAAAGGCTTTGAATGCTCGC+TGG | 0.550380 | 5_4:-21355314 | None:intergenic |
| TTGGGAAAACTACCTTCTCT+AGG | 0.551123 | 5_4:+21354825 | Msa0843640:CDS |
| GAGCATGTATGTAGTTGGCA+AGG | 0.551134 | 5_4:+21354321 | Msa0843640:CDS |
| CACGTGCTTACTCAACATGT+TGG | 0.554810 | 5_4:-21354448 | Msa0843650:CDS |
| ATGGAGCTTCTCAGTGAGGA+AGG | 0.558796 | 5_4:+21356822 | Msa0843640:three_prime_UTR |
| ATATCCATATCTTTGAGAGA+TGG | 0.563396 | 5_4:-21354975 | Msa0843650:five_prime_UTR |
| GTCCCAATTGCAAGAAAATG+TGG | 0.567161 | 5_4:+21354506 | Msa0843640:CDS |
| AATTAGAAATTGATGATTTG+GGG | 0.568281 | 5_4:+21354742 | Msa0843640:CDS |
| TTTCTGACCCTTGTCAAAGA+CGG | 0.570380 | 5_4:-21356601 | None:intergenic |
| ATTGTCTTGAGTTGGAGAAA+CGG | 0.578531 | 5_4:+21355363 | Msa0843640:CDS |
| AGCATGTATGTAGTTGGCAA+GGG | 0.578574 | 5_4:+21354322 | Msa0843640:CDS |
| ATGTAGTTGGCAAGGGAAGA+GGG | 0.579296 | 5_4:+21354329 | Msa0843640:CDS |
| GTTTCCTAAAGAGTCTGGTA+AGG | 0.579491 | 5_4:-21355237 | None:intergenic |
| CATGTGATAACAGACTCTGC+TGG | 0.580378 | 5_4:+21356661 | Msa0843640:three_prime_UTR |
| ATTGTCAATACCTTAAGAGA+AGG | 0.582121 | 5_4:-21354705 | Msa0843650:intron |
| AGTAATAGAAGGTTTGGGTG+AGG | 0.588758 | 5_4:+21355154 | Msa0843640:CDS |
| GCAGCCATGGAAAGTGAACA+TGG | 0.592285 | 5_4:+21356693 | Msa0843640:three_prime_UTR |
| TCAACTTCTTAAGAAAAGTG+AGG | 0.594974 | 5_4:-21355115 | None:intergenic |
| TGAAGAATTTGTGGTTGTCG+TGG | 0.600491 | 5_4:+21354469 | Msa0843640:CDS |
| AAACCTGTCAAGGTTATCAA+GGG | 0.602018 | 5_4:+21354872 | Msa0843640:CDS |
| ATCGTCAATCTCTCAAGAGA+AGG | 0.603660 | 5_4:-21354771 | Msa0843650:intron |
| ACGAACTACCAAACCTGTCA+AGG | 0.606036 | 5_4:+21354862 | Msa0843640:CDS |
| GAAGAATTTGTGGTTGTCGT+GGG | 0.610363 | 5_4:+21354470 | Msa0843640:CDS |
| TCAAGGTTATCAAGGGAGGA+TGG | 0.610890 | 5_4:+21354879 | Msa0843640:CDS |
| GCTGGAAGACAATTCAACTT+CGG | 0.611648 | 5_4:-21355296 | None:intergenic |
| ATCACTTGGCAGAATAGACT+GGG | 0.618969 | 5_4:-21356915 | None:intergenic |
| TCTTTGAGAGATGGAAGGCA+AGG | 0.620638 | 5_4:-21354966 | Msa0843650:five_prime_UTR |
| CCATATCTTTGAGAGATGGA+AGG | 0.624264 | 5_4:-21354971 | Msa0843650:five_prime_UTR |
| TATACCAGTAATGGACCCAA+AGG | 0.629781 | 5_4:-21356792 | None:intergenic |
| GTCATCTTCCCTATATTGGG+AGG | 0.632512 | 5_4:-21354283 | None:intergenic |
| TGGCGGATTAAAGCTCATGA+TGG | 0.638313 | 5_4:+21356890 | Msa0843640:three_prime_UTR |
| ATTTCAAGTCTTGATAAGAG+CGG | 0.640187 | 5_4:-21354915 | Msa0843650:five_prime_UTR |
| CCACAAATTCAATCCGTGCG+AGG | 0.642183 | 5_4:+21356526 | Msa0843640:CDS |
| GTGTAAAAGGGAAACAGGTG+AGG | 0.643306 | 5_4:+21355385 | Msa0843640:CDS |
| CCTGTCAAGGTTATCAAGGG+AGG | 0.654883 | 5_4:+21354875 | Msa0843640:CDS |
| TTTGATGGAGCTTCTCAGTG+AGG | 0.656661 | 5_4:+21356818 | Msa0843640:three_prime_UTR |
| TGAACATGGAATTTGCAGCA+AGG | 0.663342 | 5_4:+21356707 | Msa0843640:three_prime_UTR |
| CGAAAATCAACAGAAGCTTG+GGG | 0.668023 | 5_4:-21356743 | None:intergenic |
| TAGGGAAGATGACTTCACTG+AGG | 0.777761 | 5_4:+21354293 | Msa0843640:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGACAATTTTATATTTA+TGG | + | chr5_4:21355478-21355497 | Msa0843640:intron | 10.0% |
| !!! | ACTATTTGTTTTAAAAAATT+CGG | + | chr5_4:21355763-21355782 | Msa0843640:intron | 10.0% |
| !! | AATTAAATTTGAAAGTAGAT+CGG | + | chr5_4:21354373-21354392 | Msa0843640:CDS | 15.0% |
| !! | AAAATTAGAAATTATTGAGT+TGG | + | chr5_4:21354806-21354825 | Msa0843640:CDS | 15.0% |
| !! | AAATTAGAAATTATTGAGTT+GGG | + | chr5_4:21354807-21354826 | Msa0843640:CDS | 15.0% |
| !!! | TTTAACTGATTTGTAAAAAA+TGG | + | chr5_4:21356293-21356312 | Msa0843640:intron | 15.0% |
| !!! | AGAATTAGAAATTGATGATT+TGG | + | chr5_4:21354740-21354759 | Msa0843640:CDS | 20.0% |
| !!! | GAATTAGAAATTGATGATTT+GGG | + | chr5_4:21354741-21354760 | Msa0843640:CDS | 20.0% |
| !!! | AATTAGAAATTGATGATTTG+GGG | + | chr5_4:21354742-21354761 | Msa0843640:CDS | 20.0% |
| !! | TGTCAAAATGTATTAAGAAA+AGG | - | chr5_4:21355466-21355485 | None:intergenic | 20.0% |
| !!! | ATAGTGTTTTATTGAACATT+TGG | + | chr5_4:21355535-21355554 | Msa0843640:intron | 20.0% |
| !!! | AAGAAAAAAAAGTATAACAC+AGG | - | chr5_4:21355602-21355621 | None:intergenic | 20.0% |
| !!! | TATACTTTTTTTTCTTTCAC+AGG | + | chr5_4:21355606-21355625 | Msa0843640:intron | 20.0% |
| !!! | ATTCGGTATTTTAAATTCTT+TGG | + | chr5_4:21355780-21355799 | Msa0843640:intron | 20.0% |
| !!! | TTTAATGTATAGTTTGTTGA+AGG | + | chr5_4:21356031-21356050 | Msa0843640:intron | 20.0% |
| !!! | TTAATGTATAGTTTGTTGAA+GGG | + | chr5_4:21356032-21356051 | Msa0843640:intron | 20.0% |
| !!! | TCTCATTTATGATGTTTTAA+TGG | + | chr5_4:21356222-21356241 | Msa0843640:intron | 20.0% |
| !! | GAAAAAATCATTAGAAATCT+TGG | + | chr5_4:21356548-21356567 | Msa0843640:CDS | 20.0% |
| !!! | ATTTTCGTAATTTCTTCATT+AGG | + | chr5_4:21356759-21356778 | Msa0843640:three_prime_UTR | 20.0% |
| ! | GTCTGTAAATGTATTAAAGA+AGG | - | chr5_4:21354630-21354649 | Msa0843650:intron | 25.0% |
| !!! | TCTTAAGGTATTGACAATTT+TGG | + | chr5_4:21354710-21354729 | Msa0843640:CDS | 25.0% |
| ! | CTAAGTTCAATTCATAAACT+TGG | + | chr5_4:21355023-21355042 | Msa0843640:CDS | 25.0% |
| ! | TTCAATATTGCGAAGTTTAA+GGG | - | chr5_4:21355060-21355079 | None:intergenic | 25.0% |
| !!! | TATTTTTGATTGTCTTGAGT+TGG | + | chr5_4:21355355-21355374 | Msa0843640:CDS | 25.0% |
| !! | GTTTGAATGTGAGATATTTT+TGG | - | chr5_4:21355416-21355435 | None:intergenic | 25.0% |
| !!! | AAACTCTTAAAGGTATGTTT+TGG | + | chr5_4:21355432-21355451 | Msa0843640:intron | 25.0% |
| ! | TCAATAAAACACTATGATAG+AGG | - | chr5_4:21355530-21355549 | None:intergenic | 25.0% |
| !!! | TCAAGTGTTTTATTGATTCT+GGG | + | chr5_4:21355558-21355577 | Msa0843640:intron | 25.0% |
| ! | ACACAGGAATTAAACTTAAT+GGG | - | chr5_4:21355586-21355605 | None:intergenic | 25.0% |
| ! | AACACAGGAATTAAACTTAA+TGG | - | chr5_4:21355587-21355606 | None:intergenic | 25.0% |
| ! | TATTTGAAGAGATGAAGATT+TGG | + | chr5_4:21355646-21355665 | Msa0843640:intron | 25.0% |
| ! | ATTTGAAGAGATGAAGATTT+GGG | + | chr5_4:21355647-21355666 | Msa0843640:intron | 25.0% |
| ! | GTTTATTTGTTCAGATCTAA+AGG | + | chr5_4:21355692-21355711 | Msa0843640:intron | 25.0% |
| ! | CTGAATACTACAAACATATT+GGG | + | chr5_4:21355803-21355822 | Msa0843640:intron | 25.0% |
| ! | TGAATACTACAAACATATTG+GGG | + | chr5_4:21355804-21355823 | Msa0843640:intron | 25.0% |
| ! | TTATTTGGTTGAAGAAAACT+AGG | - | chr5_4:21355848-21355867 | None:intergenic | 25.0% |
| ! | ATAACTTGAGCTCAATTATT+TGG | - | chr5_4:21355863-21355882 | None:intergenic | 25.0% |
| ! | AATTGATGAAGATACAAAGA+AGG | - | chr5_4:21356479-21356498 | None:intergenic | 25.0% |
| ! | ATTAGGAAATATGATTCCTT+TGG | + | chr5_4:21356776-21356795 | Msa0843640:three_prime_UTR | 25.0% |
| ! | TTAGGAAATATGATTCCTTT+GGG | + | chr5_4:21356777-21356796 | Msa0843640:three_prime_UTR | 25.0% |
| ! | ATCAAATCTTATACCAGTAA+TGG | - | chr5_4:21356804-21356823 | None:intergenic | 25.0% |
| ! | ATTACTGGTATAAGATTTGA+TGG | + | chr5_4:21356803-21356822 | Msa0843640:three_prime_UTR | 25.0% |
| ! | AACTTCAATTCACTAACAAA+AGG | - | chr5_4:21356953-21356972 | None:intergenic | 25.0% |
| ! | ATTCACAAATGAAACAGAAA+AGG | - | chr5_4:21356985-21357004 | None:intergenic | 25.0% |
| !! | TCTTTAAGTTGTTGGGTATA+AGG | - | chr5_4:21354555-21354574 | Msa0843650:intron | 30.0% |
| !! | ATCCAACTCTTTAAGTTGTT+GGG | - | chr5_4:21354562-21354581 | Msa0843650:intron | 30.0% |
| TTAATACATTTACAGACGCT+AGG | + | chr5_4:21354633-21354652 | Msa0843640:CDS | 30.0% | |
| ATTGTCAATACCTTAAGAGA+AGG | - | chr5_4:21354708-21354727 | Msa0843650:intron | 30.0% | |
| !!! | AATTTTAGAACTCCTAGAGA+AGG | - | chr5_4:21354840-21354859 | Msa0843650:CDS | 30.0% |
| !! | TTCTCTAGGAGTTCTAAAAT+TGG | + | chr5_4:21354839-21354858 | Msa0843640:CDS | 30.0% |
| ! | ATTTCAAGTCTTGATAAGAG+CGG | - | chr5_4:21354918-21354937 | Msa0843650:five_prime_UTR | 30.0% |
| ! | AAGAAGTTGTCCTAATTTGT+TGG | + | chr5_4:21354938-21354957 | Msa0843640:CDS | 30.0% |
| !! | AGAAGTTGTCCTAATTTGTT+GGG | + | chr5_4:21354939-21354958 | Msa0843640:CDS | 30.0% |
| ! | ATATCCATATCTTTGAGAGA+TGG | - | chr5_4:21354978-21354997 | Msa0843650:five_prime_UTR | 30.0% |
| CTTCAATATTGCGAAGTTTA+AGG | - | chr5_4:21355061-21355080 | None:intergenic | 30.0% | |
| ! | AGTTAACATGTTTTCCAGAT+GGG | + | chr5_4:21355081-21355100 | Msa0843640:CDS | 30.0% |
| TCAACTTCTTAAGAAAAGTG+AGG | - | chr5_4:21355118-21355137 | None:intergenic | 30.0% | |
| GATAATTGCTCAGTAATAGA+AGG | + | chr5_4:21355143-21355162 | Msa0843640:CDS | 30.0% | |
| TGACCTTGAATCATTATCAT+TGG | + | chr5_4:21355193-21355212 | Msa0843640:CDS | 30.0% | |
| TCGGACAGTTATAAATGTAT+AGG | - | chr5_4:21355280-21355299 | None:intergenic | 30.0% | |
| TCTCACATTCAAACTCTTAA+AGG | + | chr5_4:21355422-21355441 | Msa0843640:CDS | 30.0% | |
| !!! | GTCAAGTGTTTTATTGATTC+TGG | + | chr5_4:21355557-21355576 | Msa0843640:intron | 30.0% |
| ATTTGTTCAGATCTAAAGGA+AGG | + | chr5_4:21355696-21355715 | Msa0843640:intron | 30.0% | |
| GCTGAATACTACAAACATAT+TGG | + | chr5_4:21355802-21355821 | Msa0843640:intron | 30.0% | |
| ! | AGAACTCGAATTTGCTTTAT+GGG | + | chr5_4:21355916-21355935 | Msa0843640:intron | 30.0% |
| ! | CAATTTGAAGTCAATAAAGC+TGG | - | chr5_4:21355994-21356013 | None:intergenic | 30.0% |
| CATTAAACTGCATGTCAAAA+AGG | - | chr5_4:21356018-21356037 | None:intergenic | 30.0% | |
| !! | ATTGTTATGTTGGTGTCAAA+GGG | - | chr5_4:21356115-21356134 | None:intergenic | 30.0% |
| TTGTACTCACATTGTTATGT+TGG | - | chr5_4:21356125-21356144 | None:intergenic | 30.0% | |
| !!! | CTTTATATTTTTCAAGCCTC+CGG | + | chr5_4:21356195-21356214 | Msa0843640:intron | 30.0% |
| ACATCATAAATGAGAATGTC+CGG | - | chr5_4:21356217-21356236 | None:intergenic | 30.0% | |
| GTTGAAAAACAAATTTGCAC+TGG | + | chr5_4:21356246-21356265 | Msa0843640:intron | 30.0% | |
| AATTAATTCCGTCTTTGACA+AGG | + | chr5_4:21356593-21356612 | Msa0843640:CDS | 30.0% | |
| ATTAATTCCGTCTTTGACAA+GGG | + | chr5_4:21356594-21356613 | Msa0843640:CDS | 30.0% | |
| ! | CATATGAATTGTTGTTCTAG+TGG | - | chr5_4:21356629-21356648 | None:intergenic | 30.0% |
| ! | TTCTCTGATTTCTTTTGCTA+AGG | - | chr5_4:21356857-21356876 | None:intergenic | 30.0% |
| !! | CAGAGAATTTTTCAGAAGAT+TGG | + | chr5_4:21356870-21356889 | Msa0843640:three_prime_UTR | 30.0% |
| !! | AGAATTTTTCAGAAGATTGG+CGG | + | chr5_4:21356873-21356892 | Msa0843640:three_prime_UTR | 30.0% |
| GAAGTCATCTTCCCTATATT+GGG | - | chr5_4:21354289-21354308 | None:intergenic | 35.0% | |
| TGAAGTCATCTTCCCTATAT+TGG | - | chr5_4:21354290-21354309 | None:intergenic | 35.0% | |
| ACTTTGAGCATGTATGTAGT+TGG | + | chr5_4:21354316-21354335 | Msa0843640:CDS | 35.0% | |
| ! | CTCCACATTTTCTTGCAATT+GGG | - | chr5_4:21354511-21354530 | Msa0843650:CDS | 35.0% |
| TACCCAACAACTTAAAGAGT+TGG | + | chr5_4:21354557-21354576 | Msa0843640:CDS | 35.0% | |
| !! | CATCCAACTCTTTAAGTTGT+TGG | - | chr5_4:21354563-21354582 | Msa0843650:intron | 35.0% |
| CTTAAAGAGTTGGATGTGAA+AGG | + | chr5_4:21354567-21354586 | Msa0843640:CDS | 35.0% | |
| TTGGATGTGAAAGGATATAC+AGG | + | chr5_4:21354576-21354595 | Msa0843640:CDS | 35.0% | |
| ! | AACAGCTTTTGCAATTTACG+AGG | - | chr5_4:21354659-21354678 | Msa0843650:intron | 35.0% |
| AAGGTAGTTTCTCCAATTGT+GGG | - | chr5_4:21354689-21354708 | Msa0843650:intron | 35.0% | |
| AAACCTGTCAAGGTTATCAA+GGG | + | chr5_4:21354872-21354891 | Msa0843640:CDS | 35.0% | |
| ! | TTTCAAGTCTTGATAAGAGC+GGG | - | chr5_4:21354917-21354936 | Msa0843650:five_prime_UTR | 35.0% |
| ! | GAGTTAACATGTTTTCCAGA+TGG | + | chr5_4:21355080-21355099 | Msa0843640:CDS | 35.0% |
| TTGCTCAGTAATAGAAGGTT+TGG | + | chr5_4:21355148-21355167 | Msa0843640:CDS | 35.0% | |
| TGCTCAGTAATAGAAGGTTT+GGG | + | chr5_4:21355149-21355168 | Msa0843640:CDS | 35.0% | |
| ! | GCTCCAATGATAATGATTCA+AGG | - | chr5_4:21355199-21355218 | None:intergenic | 35.0% |
| ATAGGTCTTGAAGTGAACTA+AGG | - | chr5_4:21355262-21355281 | None:intergenic | 35.0% | |
| ACAAATTCTTCAGAGCAGAA+AGG | - | chr5_4:21355334-21355353 | None:intergenic | 35.0% | |
| !! | ATTGTCTTGAGTTGGAGAAA+CGG | + | chr5_4:21355363-21355382 | Msa0843640:CDS | 35.0% |
| CACTATGATAGAGGAAGAAA+AGG | - | chr5_4:21355521-21355540 | None:intergenic | 35.0% | |
| CAAATAAACTACATACGCAG+TGG | - | chr5_4:21355681-21355700 | None:intergenic | 35.0% | |
| ! | AACATATTGGGGTATTTGCT+CGG | + | chr5_4:21355815-21355834 | Msa0843640:intron | 35.0% |
| ! | GAGAACTCGAATTTGCTTTA+TGG | + | chr5_4:21355915-21355934 | Msa0843640:intron | 35.0% |
| !! | CATTGTTATGTTGGTGTCAA+AGG | - | chr5_4:21356116-21356135 | None:intergenic | 35.0% |
| !! | CCATTACAGAGTTTTGATGA+TGG | - | chr5_4:21356157-21356176 | None:intergenic | 35.0% |
| CCATCATCAAAACTCTGTAA+TGG | + | chr5_4:21356154-21356173 | Msa0843640:intron | 35.0% | |
| !! | TGCTGATAATCTTGATTTGC+AGG | + | chr5_4:21356498-21356517 | Msa0843640:intron | 35.0% |
| !!! | CTAATGATTTTTTCCTCGCA+CGG | - | chr5_4:21356542-21356561 | None:intergenic | 35.0% |
| AATTCCATGTTCACTTTCCA+TGG | - | chr5_4:21356700-21356719 | None:intergenic | 35.0% | |
| ACGAAAATCAACAGAAGCTT+GGG | - | chr5_4:21356747-21356766 | None:intergenic | 35.0% | |
| TACGAAAATCAACAGAAGCT+TGG | - | chr5_4:21356748-21356767 | None:intergenic | 35.0% | |
| AGCATGTATGTAGTTGGCAA+GGG | + | chr5_4:21354322-21354341 | Msa0843640:CDS | 40.0% | |
| ! | AGGGTTCTTTTGGCAGAATT+AGG | + | chr5_4:21354348-21354367 | Msa0843640:CDS | 40.0% |
| ! | CTACACTTTTCACTCTCTCA+AGG | - | chr5_4:21354413-21354432 | None:intergenic | 40.0% |
| GTAAGCACGTGAAGAATTTG+TGG | + | chr5_4:21354460-21354479 | Msa0843640:CDS | 40.0% | |
| TGAAGAATTTGTGGTTGTCG+TGG | + | chr5_4:21354469-21354488 | Msa0843640:CDS | 40.0% | |
| GAAGAATTTGTGGTTGTCGT+GGG | + | chr5_4:21354470-21354489 | Msa0843640:CDS | 40.0% | |
| GTCCCAATTGCAAGAAAATG+TGG | + | chr5_4:21354506-21354525 | Msa0843640:CDS | 40.0% | |
| ! | GCTCCACATTTTCTTGCAAT+TGG | - | chr5_4:21354512-21354531 | Msa0843650:CDS | 40.0% |
| ! | AGACATCCATTCTGGGAAAT+AGG | - | chr5_4:21354604-21354623 | Msa0843650:intron | 40.0% |
| AAGGACTAGACATCCATTCT+GGG | - | chr5_4:21354611-21354630 | Msa0843650:intron | 40.0% | |
| CTGTTTACACATCCCACAAT+TGG | + | chr5_4:21354674-21354693 | Msa0843640:CDS | 40.0% | |
| GAAGGTAGTTTCTCCAATTG+TGG | - | chr5_4:21354690-21354709 | Msa0843650:intron | 40.0% | |
| GGAGAAACTACCTTCTCTTA+AGG | + | chr5_4:21354695-21354714 | Msa0843640:CDS | 40.0% | |
| ATCGTCAATCTCTCAAGAGA+AGG | - | chr5_4:21354774-21354793 | Msa0843650:intron | 40.0% | |
| CTTGAGAGATTGACGATTCA+AGG | + | chr5_4:21354777-21354796 | Msa0843640:CDS | 40.0% | |
| TTGGGAAAACTACCTTCTCT+AGG | + | chr5_4:21354825-21354844 | Msa0843640:CDS | 40.0% | |
| ! | CTTGATAACCTTGACAGGTT+TGG | - | chr5_4:21354873-21354892 | Msa0843650:CDS | 40.0% |
| CAAACCTGTCAAGGTTATCA+AGG | + | chr5_4:21354871-21354890 | Msa0843640:CDS | 40.0% | |
| ! | CCATATCTTTGAGAGATGGA+AGG | - | chr5_4:21354974-21354993 | Msa0843650:five_prime_UTR | 40.0% |
| CCTTCCATCTCTCAAAGATA+TGG | + | chr5_4:21354971-21354990 | Msa0843640:CDS | 40.0% | |
| AGTAATAGAAGGTTTGGGTG+AGG | + | chr5_4:21355154-21355173 | Msa0843640:CDS | 40.0% | |
| ACATCCTTACCAGACTCTTT+AGG | + | chr5_4:21355233-21355252 | Msa0843640:CDS | 40.0% | |
| GTTTCCTAAAGAGTCTGGTA+AGG | - | chr5_4:21355240-21355259 | None:intergenic | 40.0% | |
| CTAAGGTTTCCTAAAGAGTC+TGG | - | chr5_4:21355245-21355264 | None:intergenic | 40.0% | |
| GCTGGAAGACAATTCAACTT+CGG | - | chr5_4:21355299-21355318 | None:intergenic | 40.0% | |
| AGTTGGAGAAACGGTGTAAA+AGG | + | chr5_4:21355372-21355391 | Msa0843640:CDS | 40.0% | |
| GTTGGAGAAACGGTGTAAAA+GGG | + | chr5_4:21355373-21355392 | Msa0843640:CDS | 40.0% | |
| AAACGGTGTAAAAGGGAAAC+AGG | + | chr5_4:21355380-21355399 | Msa0843640:CDS | 40.0% | |
| TCATAAATGAGAATGTCCGG+AGG | - | chr5_4:21356214-21356233 | None:intergenic | 40.0% | |
| TTTCTGACCCTTGTCAAAGA+CGG | - | chr5_4:21356604-21356623 | None:intergenic | 40.0% | |
| TGAACATGGAATTTGCAGCA+AGG | + | chr5_4:21356707-21356726 | Msa0843640:three_prime_UTR | 40.0% | |
| CGAAAATCAACAGAAGCTTG+GGG | - | chr5_4:21356746-21356765 | None:intergenic | 40.0% | |
| !! | TATACCAGTAATGGACCCAA+AGG | - | chr5_4:21356795-21356814 | None:intergenic | 40.0% |
| ATCACTTGGCAGAATAGACT+GGG | - | chr5_4:21356918-21356937 | None:intergenic | 40.0% | |
| GGTTTCTCAACTTGATCACT+TGG | - | chr5_4:21356932-21356951 | None:intergenic | 40.0% | |
| GTCATCTTCCCTATATTGGG+AGG | - | chr5_4:21354286-21354305 | None:intergenic | 45.0% | |
| TAGGGAAGATGACTTCACTG+AGG | + | chr5_4:21354293-21354312 | Msa0843640:CDS | 45.0% | |
| GAGCATGTATGTAGTTGGCA+AGG | + | chr5_4:21354321-21354340 | Msa0843640:CDS | 45.0% | |
| TATGTAGTTGGCAAGGGAAG+AGG | + | chr5_4:21354328-21354347 | Msa0843640:CDS | 45.0% | |
| ATGTAGTTGGCAAGGGAAGA+GGG | + | chr5_4:21354329-21354348 | Msa0843640:CDS | 45.0% | |
| CACGTGCTTACTCAACATGT+TGG | - | chr5_4:21354451-21354470 | Msa0843650:CDS | 45.0% | |
| CAGGTTCCTATTTCCCAGAA+TGG | + | chr5_4:21354595-21354614 | Msa0843640:CDS | 45.0% | |
| GAAGGACTAGACATCCATTC+TGG | - | chr5_4:21354612-21354631 | Msa0843650:intron | 45.0% | |
| ACGAACTACCAAACCTGTCA+AGG | + | chr5_4:21354862-21354881 | Msa0843640:CDS | 45.0% | |
| TCAAGGTTATCAAGGGAGGA+TGG | + | chr5_4:21354879-21354898 | Msa0843640:CDS | 45.0% | |
| CAAGGCAAGCCCAACAAATT+AGG | - | chr5_4:21354951-21354970 | Msa0843650:five_prime_UTR | 45.0% | |
| ! | TCTTTGAGAGATGGAAGGCA+AGG | - | chr5_4:21354969-21354988 | Msa0843650:five_prime_UTR | 45.0% |
| !! | AGGTTTGTTAGCATCCCATC+TGG | - | chr5_4:21355098-21355117 | None:intergenic | 45.0% |
| TCTGGTAAGGATGTCAGGTT+CGG | - | chr5_4:21355227-21355246 | None:intergenic | 45.0% | |
| AAGAGTCTGGTAAGGATGTC+AGG | - | chr5_4:21355232-21355251 | None:intergenic | 45.0% | |
| GTGTAAAAGGGAAACAGGTG+AGG | + | chr5_4:21355385-21355404 | Msa0843640:CDS | 45.0% | |
| AAAGGGAAACAGGTGAGGAT+TGG | + | chr5_4:21355390-21355409 | Msa0843640:CDS | 45.0% | |
| ! | CACAGGTGACTGTTTTCGTT+AGG | + | chr5_4:21355623-21355642 | Msa0843640:intron | 45.0% |
| GGCGACACGTTATTCGTTAT+TGG | - | chr5_4:21356064-21356083 | None:intergenic | 45.0% | |
| CATGTGATAACAGACTCTGC+TGG | + | chr5_4:21356661-21356680 | Msa0843640:three_prime_UTR | 45.0% | |
| GATAACAGACTCTGCTGGAA+AGG | + | chr5_4:21356666-21356685 | Msa0843640:three_prime_UTR | 45.0% | |
| GATTCCTTTGGGTCCATTAC+TGG | + | chr5_4:21356788-21356807 | Msa0843640:three_prime_UTR | 45.0% | |
| TTTGATGGAGCTTCTCAGTG+AGG | + | chr5_4:21356818-21356837 | Msa0843640:three_prime_UTR | 45.0% | |
| !! | TGGCGGATTAAAGCTCATGA+TGG | + | chr5_4:21356890-21356909 | Msa0843640:three_prime_UTR | 45.0% |
| GATCACTTGGCAGAATAGAC+TGG | - | chr5_4:21356919-21356938 | None:intergenic | 45.0% | |
| !!! | TATGTTTTTTTATAAAATTT+GGG | - | chr5_4:21356380-21356399 | None:intergenic | 5.0% |
| !!! | ATATGTTTTTTTATAAAATT+TGG | - | chr5_4:21356381-21356400 | None:intergenic | 5.0% |
| ! | GCAAGGGAAGAGGGTTCTTT+TGG | + | chr5_4:21354338-21354357 | Msa0843640:CDS | 50.0% |
| ! | CCTCCCTTGATAACCTTGAC+AGG | - | chr5_4:21354878-21354897 | Msa0843650:CDS | 50.0% |
| CCTGTCAAGGTTATCAAGGG+AGG | + | chr5_4:21354875-21354894 | Msa0843640:CDS | 50.0% | |
| !! | GAAAGGCTTTGAATGCTCGC+TGG | - | chr5_4:21355317-21355336 | None:intergenic | 50.0% |
| TCGAGCGATTCATCGTTTGG+TGG | - | chr5_4:21355895-21355914 | None:intergenic | 50.0% | |
| CTCTCGAGCGATTCATCGTT+TGG | - | chr5_4:21355898-21355917 | None:intergenic | 50.0% | |
| ! | AACCCCAGCAGAAGTACAGA+GGG | - | chr5_4:21356085-21356104 | None:intergenic | 50.0% |
| ! | AAACCCCAGCAGAAGTACAG+AGG | - | chr5_4:21356086-21356105 | None:intergenic | 50.0% |
| ! | CCTCGCACGGATTGAATTTG+TGG | - | chr5_4:21356529-21356548 | None:intergenic | 50.0% |
| CCACAAATTCAATCCGTGCG+AGG | + | chr5_4:21356526-21356545 | Msa0843640:CDS | 50.0% | |
| GCAGCCATGGAAAGTGAACA+TGG | + | chr5_4:21356693-21356712 | Msa0843640:three_prime_UTR | 50.0% | |
| ATGGAGCTTCTCAGTGAGGA+AGG | + | chr5_4:21356822-21356841 | Msa0843640:three_prime_UTR | 50.0% | |
| TCGCCCTCTGTACTTCTGCT+GGG | + | chr5_4:21356079-21356098 | Msa0843640:intron | 55.0% | |
| CTGGAAAGGAAGAGCAGCCA+TGG | + | chr5_4:21356680-21356699 | Msa0843640:three_prime_UTR | 55.0% | |
| GTCGCCCTCTGTACTTCTGC+TGG | + | chr5_4:21356078-21356097 | Msa0843640:intron | 60.0% | |
| CGCCCTCTGTACTTCTGCTG+GGG | + | chr5_4:21356080-21356099 | Msa0843640:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 21354276 | 21357014 | 21354276 | ID=Msa0843640;Name=Msa0843640 |
| chr5_4 | mRNA | 21354276 | 21357014 | 21354276 | ID=Msa0843640-mRNA-1;Parent=Msa0843640;Name=Msa0843640-mRNA-1;_AED=0.30;_eAED=0.32;_QI=0|0|0.5|1|1|1|2|382|426 |
| chr5_4 | exon | 21354276 | 21355443 | 21354276 | ID=Msa0843640-mRNA-1:exon:8806;Parent=Msa0843640-mRNA-1 |
| chr5_4 | exon | 21356520 | 21357014 | 21356520 | ID=Msa0843640-mRNA-1:exon:8807;Parent=Msa0843640-mRNA-1 |
| chr5_4 | CDS | 21354276 | 21355443 | 21354276 | ID=Msa0843640-mRNA-1:cds;Parent=Msa0843640-mRNA-1 |
| chr5_4 | CDS | 21356520 | 21356632 | 21356520 | ID=Msa0843640-mRNA-1:cds;Parent=Msa0843640-mRNA-1 |
| chr5_4 | three_prime_UTR | 21356633 | 21357014 | 21356633 | ID=Msa0843640-mRNA-1:three_prime_utr;Parent=Msa0843640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
