Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0682780 | XP_013456018.1 | 98.765 | 81 | 1 | 0 | 1 | 81 | 1 | 81 | 1.01e-50 | 164 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0682780 | A0A072UJW8 | 98.765 | 81 | 1 | 0 | 1 | 81 | 1 | 81 | 4.82e-51 | 164 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002490 | Msa0682780 | 0.815689 | 8.128420e-52 | -8.615850e-47 |
| Msa0008410 | Msa0682780 | 0.810590 | 1.068782e-50 | -8.615850e-47 |
| Msa0015300 | Msa0682780 | 0.831775 | 1.378721e-55 | -8.615850e-47 |
| Msa0016670 | Msa0682780 | 0.805087 | 1.581228e-49 | -8.615850e-47 |
| Msa0018620 | Msa0682780 | 0.842017 | 3.342865e-58 | -8.615850e-47 |
| Msa0030380 | Msa0682780 | 0.835069 | 2.079779e-56 | -8.615850e-47 |
| Msa0032260 | Msa0682780 | 0.834381 | 3.098259e-56 | -8.615850e-47 |
| Msa0032840 | Msa0682780 | -0.818954 | 1.496866e-52 | -8.615850e-47 |
| Msa0046750 | Msa0682780 | 0.801305 | 9.588799e-49 | -8.615850e-47 |
| Msa0049650 | Msa0682780 | -0.819729 | 9.966354e-53 | -8.615850e-47 |
| Msa0057140 | Msa0682780 | 0.806340 | 8.627201e-50 | -8.615850e-47 |
| Msa0064350 | Msa0682780 | 0.823961 | 1.044786e-53 | -8.615850e-47 |
| Msa0073670 | Msa0682780 | 0.808153 | 3.561895e-50 | -8.615850e-47 |
| Msa0074320 | Msa0682780 | 0.809608 | 1.739300e-50 | -8.615850e-47 |
| Msa0076000 | Msa0682780 | 0.852438 | 4.616810e-61 | -8.615850e-47 |
| Msa0082280 | Msa0682780 | 0.826911 | 2.092351e-54 | -8.615850e-47 |
| Msa0084650 | Msa0682780 | 0.809106 | 2.228834e-50 | -8.615850e-47 |
| Msa0084940 | Msa0682780 | 0.802147 | 6.441400e-49 | -8.615850e-47 |
| Msa0094920 | Msa0682780 | 0.820704 | 5.959248e-53 | -8.615850e-47 |
| Msa0094950 | Msa0682780 | 0.811385 | 7.189402e-51 | -8.615850e-47 |
| Msa0095380 | Msa0682780 | 0.820315 | 7.320736e-53 | -8.615850e-47 |
| Msa0107250 | Msa0682780 | 0.802974 | 4.349268e-49 | -8.615850e-47 |
| Msa0115270 | Msa0682780 | 0.810195 | 1.300341e-50 | -8.615850e-47 |
| Msa0115390 | Msa0682780 | 0.821079 | 4.884711e-53 | -8.615850e-47 |
| Msa0607200 | Msa0682780 | 0.806980 | 6.319473e-50 | -8.615850e-47 |
| Msa0616020 | Msa0682780 | 0.826382 | 2.796655e-54 | -8.615850e-47 |
| Msa0619070 | Msa0682780 | 0.834290 | 3.264911e-56 | -8.615850e-47 |
| Msa0623700 | Msa0682780 | 0.874017 | 9.380067e-68 | -8.615850e-47 |
| Msa0625530 | Msa0682780 | -0.815634 | 8.360806e-52 | -8.615850e-47 |
| Msa0627910 | Msa0682780 | 0.809815 | 1.570483e-50 | -8.615850e-47 |
| Msa0647490 | Msa0682780 | 0.838453 | 2.849342e-57 | -8.615850e-47 |
| Msa0650920 | Msa0682780 | 0.800415 | 1.457015e-48 | -8.615850e-47 |
| Msa0654760 | Msa0682780 | -0.844190 | 8.815279e-59 | -8.615850e-47 |
| Msa0663900 | Msa0682780 | 0.838107 | 3.499546e-57 | -8.615850e-47 |
| Msa0664960 | Msa0682780 | 0.812182 | 4.822139e-51 | -8.615850e-47 |
| Msa0669850 | Msa0682780 | 0.816930 | 4.289891e-52 | -8.615850e-47 |
| Msa0673010 | Msa0682780 | -0.805519 | 1.283480e-49 | -8.615850e-47 |
| Msa0680240 | Msa0682780 | 0.836676 | 8.136693e-57 | -8.615850e-47 |
| Msa0682780 | Msa0682900 | 0.800115 | 1.676878e-48 | -8.615850e-47 |
| Msa0682780 | Msa0687630 | 0.862875 | 3.717068e-64 | -8.615850e-47 |
| Msa0682780 | Msa0690160 | 0.831426 | 1.680905e-55 | -8.615850e-47 |
| Msa0682780 | Msa0691900 | 0.816991 | 4.156333e-52 | -8.615850e-47 |
| Msa0682780 | Msa0692080 | 0.828783 | 7.420025e-55 | -8.615850e-47 |
| Msa0682780 | Msa0692940 | 0.826572 | 2.520704e-54 | -8.615850e-47 |
| Msa0682780 | Msa0696450 | 0.830305 | 3.165462e-55 | -8.615850e-47 |
| Msa0682780 | Msa0696620 | 0.808947 | 2.411023e-50 | -8.615850e-47 |
| Msa0682780 | Msa0703230 | 0.863702 | 2.060921e-64 | -8.615850e-47 |
| Msa0682780 | Msa0711490 | 0.816244 | 6.112424e-52 | -8.615850e-47 |
| Msa0682780 | Msa0713820 | 0.823185 | 1.586929e-53 | -8.615850e-47 |
| Msa0682780 | Msa0735460 | 0.827229 | 1.755488e-54 | -8.615850e-47 |
| Msa0682780 | Msa0756060 | 0.811060 | 8.457282e-51 | -8.615850e-47 |
| Msa0682780 | Msa0776220 | 0.812937 | 3.297826e-51 | -8.615850e-47 |
| Msa0682780 | Msa0797120 | 0.832243 | 1.056364e-55 | -8.615850e-47 |
| Msa0682780 | Msa0806920 | 0.838252 | 3.211413e-57 | -8.615850e-47 |
| Msa0682780 | Msa0813720 | 0.840608 | 7.846665e-58 | -8.615850e-47 |
| Msa0682780 | Msa0813740 | 0.822219 | 2.662775e-53 | -8.615850e-47 |
| Msa0682780 | Msa0814250 | 0.801780 | 7.659907e-49 | -8.615850e-47 |
| Msa0682780 | Msa0824640 | 0.806681 | 7.308031e-50 | -8.615850e-47 |
| Msa0682780 | Msa0831870 | 0.839717 | 1.341027e-57 | -8.615850e-47 |
| Msa0682780 | Msa0837660 | 0.813259 | 2.801706e-51 | -8.615850e-47 |
| Msa0682780 | Msa0850960 | 0.820024 | 8.532110e-53 | -8.615850e-47 |
| Msa0682780 | Msa0864010 | 0.807199 | 5.679241e-50 | -8.615850e-47 |
| Msa0682780 | Msa0874500 | 0.817577 | 3.067926e-52 | -8.615850e-47 |
| Msa0682780 | Msa0903330 | 0.806044 | 9.956697e-50 | -8.615850e-47 |
| Msa0682780 | Msa0932660 | -0.827933 | 1.190006e-54 | -8.615850e-47 |
| Msa0682780 | Msa0937670 | 0.801005 | 1.104064e-48 | -8.615850e-47 |
| Msa0682780 | Msa0966270 | 0.805606 | 1.230713e-49 | -8.615850e-47 |
| Msa0682780 | Msa0967370 | 0.803727 | 3.036403e-49 | -8.615850e-47 |
| Msa0682780 | Msa0970570 | -0.810741 | 9.915078e-51 | -8.615850e-47 |
| Msa0682780 | Msa0974810 | 0.828557 | 8.412974e-55 | -8.615850e-47 |
| Msa0682780 | Msa1019260 | 0.802332 | 5.898622e-49 | -8.615850e-47 |
| Msa0682780 | Msa1040830 | 0.803759 | 2.990143e-49 | -8.615850e-47 |
| Msa0682780 | Msa1081150 | 0.810967 | 8.858022e-51 | -8.615850e-47 |
| Msa0682780 | Msa1082700 | 0.851440 | 8.861047e-61 | -8.615850e-47 |
| Msa0682780 | Msa1089840 | 0.857413 | 1.659824e-62 | -8.615850e-47 |
| Msa0682780 | Msa1094420 | 0.801967 | 7.011132e-49 | -8.615850e-47 |
| Msa0682780 | Msa1104140 | 0.811636 | 6.340937e-51 | -8.615850e-47 |
| Msa0682780 | Msa1109570 | 0.803744 | 3.011825e-49 | -8.615850e-47 |
| Msa0682780 | Msa1126510 | 0.842895 | 1.955582e-58 | -8.615850e-47 |
| Msa0682780 | Msa1126770 | 0.854666 | 1.057265e-61 | -8.615850e-47 |
| Msa0682780 | Msa1127830 | 0.829800 | 4.201991e-55 | -8.615850e-47 |
| Msa0682780 | Msa1127890 | 0.835781 | 1.374045e-56 | -8.615850e-47 |
| Msa0682780 | Msa1134110 | 0.846489 | 2.103698e-59 | -8.615850e-47 |
| Msa0682780 | Msa1165870 | 0.834260 | 3.322427e-56 | -8.615850e-47 |
| Msa0682780 | Msa1166010 | 0.842935 | 1.908416e-58 | -8.615850e-47 |
| Msa0682780 | Msa1166860 | 0.843144 | 1.678338e-58 | -8.615850e-47 |
| Msa0682780 | Msa1166870 | 0.810343 | 1.208497e-50 | -8.615850e-47 |
| Msa0682780 | Msa1184370 | 0.831566 | 1.552028e-55 | -8.615850e-47 |
| Msa0682780 | Msa1187840 | 0.824617 | 7.325764e-54 | -8.615850e-47 |
| Msa0682780 | Msa1193950 | -0.823561 | 1.296112e-53 | -8.615850e-47 |
| Msa0682780 | Msa1204250 | 0.807606 | 4.656538e-50 | -8.615850e-47 |
| Msa0682780 | Msa1207270 | 0.808350 | 3.233903e-50 | -8.615850e-47 |
| Msa0682780 | Msa1210400 | 0.801147 | 1.032688e-48 | -8.615850e-47 |
| Msa0682780 | Msa1227690 | 0.842244 | 2.911068e-58 | -8.615850e-47 |
| Msa0682780 | Msa1234980 | 0.838707 | 2.451202e-57 | -8.615850e-47 |
| Msa0682780 | Msa1236960 | 0.810444 | 1.149334e-50 | -8.615850e-47 |
| Msa0682780 | Msa1246530 | -0.802859 | 4.592462e-49 | -8.615850e-47 |
| Msa0682780 | Msa1249870 | 0.829556 | 4.818909e-55 | -8.615850e-47 |
| Msa0682780 | Msa1254710 | 0.819788 | 9.662827e-53 | -8.615850e-47 |
| Msa0682780 | Msa1269300 | 0.859388 | 4.280997e-63 | -8.615850e-47 |
| Msa0682780 | Msa1275360 | 0.818931 | 1.515186e-52 | -8.615850e-47 |
| Msa0682780 | Msa1283170 | 0.821671 | 3.567364e-53 | -8.615850e-47 |
| Msa0682780 | Msa1304820 | 0.803641 | 3.164201e-49 | -8.615850e-47 |
| Msa0682780 | Msa1307950 | 0.838420 | 2.906391e-57 | -8.615850e-47 |
| Msa0682780 | Msa1310690 | 0.854969 | 8.638097e-62 | -8.615850e-47 |
| Msa0682780 | Msa1316780 | 0.851824 | 6.900484e-61 | -8.615850e-47 |
| Msa0682780 | Msa1316830 | 0.854302 | 1.347753e-61 | -8.615850e-47 |
| Msa0682780 | Msa1321630 | 0.801069 | 1.071580e-48 | -8.615850e-47 |
| Msa0682780 | Msa1333110 | 0.806520 | 7.904830e-50 | -8.615850e-47 |
| Msa0682780 | Msa1340020 | 0.804611 | 1.987723e-49 | -8.615850e-47 |
| Msa0682780 | Msa1345360 | 0.801450 | 8.953027e-49 | -8.615850e-47 |
| Msa0682780 | Msa1345450 | 0.807272 | 5.479962e-50 | -8.615850e-47 |
| Msa0682780 | Msa1363330 | 0.821861 | 3.223914e-53 | -8.615850e-47 |
| Msa0682780 | Msa1364910 | 0.849977 | 2.286587e-60 | -8.615850e-47 |
| Msa0682780 | Msa1365150 | 0.828336 | 9.513776e-55 | -8.615850e-47 |
| Msa0682780 | Msa1367880 | 0.818528 | 1.869926e-52 | -8.615850e-47 |
| Msa0682780 | Msa1368210 | 0.824976 | 6.029293e-54 | -8.615850e-47 |
| Msa0682780 | Msa1370860 | 0.833735 | 4.496078e-56 | -8.615850e-47 |
| Msa0682780 | Msa1373330 | 0.802501 | 5.444775e-49 | -8.615850e-47 |
| Msa0682780 | Msa1379760 | 0.813538 | 2.433637e-51 | -8.615850e-47 |
| Msa0682780 | Msa1385770 | 0.820992 | 5.116774e-53 | -8.615850e-47 |
| Msa0682780 | Msa1386600 | 0.821936 | 3.096616e-53 | -8.615850e-47 |
| Msa0682780 | Msa1392200 | 0.825594 | 4.304087e-54 | -8.615850e-47 |
| Msa0682780 | Msa1397810 | 0.872729 | 2.542470e-67 | -8.615850e-47 |
| Msa0682780 | Msa1403930 | -0.812669 | 3.773572e-51 | -8.615850e-47 |
| Msa0682780 | Msa1404010 | 0.835888 | 1.291067e-56 | -8.615850e-47 |
| Msa0682780 | Msa1404190 | 0.860054 | 2.698719e-63 | -8.615850e-47 |
| Msa0682780 | Msa1409240 | 0.819183 | 1.327948e-52 | -8.615850e-47 |
| Msa0682780 | Msa1434140 | 0.820394 | 7.022120e-53 | -8.615850e-47 |
| Msa0682780 | Msa1435750 | 0.820208 | 7.742989e-53 | -8.615850e-47 |
| Msa0682780 | Msa1442850 | 0.854160 | 1.481059e-61 | -8.615850e-47 |
| Msa0682780 | Msa1448690 | 0.820801 | 5.659712e-53 | -8.615850e-47 |
| Msa0682780 | Msa1450280 | 0.824000 | 1.022941e-53 | -8.615850e-47 |
| Msa0682780 | Msa1453080 | 0.828506 | 8.655091e-55 | -8.615850e-47 |
| Msa0682780 | Msa1461490 | 0.810528 | 1.102336e-50 | -8.615850e-47 |
| Msa0682780 | Msa1465080 | 0.831241 | 1.866737e-55 | -8.615850e-47 |
| Msa0682780 | Msa1466300 | 0.805477 | 1.309679e-49 | -8.615850e-47 |
| Msa0682780 | Msa1466990 | 0.810481 | 1.128113e-50 | -8.615850e-47 |
| Msa0121590 | Msa0682780 | 0.827133 | 1.851421e-54 | -8.615850e-47 |
| Msa0121820 | Msa0682780 | 0.818615 | 1.786981e-52 | -8.615850e-47 |
| Msa0127310 | Msa0682780 | 0.809878 | 1.522119e-50 | -8.615850e-47 |
| Msa0128860 | Msa0682780 | 0.805106 | 1.566320e-49 | -8.615850e-47 |
| Msa0143430 | Msa0682780 | 0.818485 | 1.912842e-52 | -8.615850e-47 |
| Msa0149000 | Msa0682780 | 0.817805 | 2.725945e-52 | -8.615850e-47 |
| Msa0155430 | Msa0682780 | 0.816532 | 5.268337e-52 | -8.615850e-47 |
| Msa0166750 | Msa0682780 | 0.801590 | 8.378911e-49 | -8.615850e-47 |
| Msa0167480 | Msa0682780 | 0.803777 | 2.964150e-49 | -8.615850e-47 |
| Msa0173740 | Msa0682780 | 0.836129 | 1.121220e-56 | -8.615850e-47 |
| Msa0173820 | Msa0682780 | 0.834754 | 2.495683e-56 | -8.615850e-47 |
| Msa0173830 | Msa0682780 | 0.815971 | 7.030721e-52 | -8.615850e-47 |
| Msa0174730 | Msa0682780 | 0.802975 | 4.347451e-49 | -8.615850e-47 |
| Msa0174770 | Msa0682780 | 0.835965 | 1.233762e-56 | -8.615850e-47 |
| Msa0181610 | Msa0682780 | 0.805746 | 1.150075e-49 | -8.615850e-47 |
| Msa0186890 | Msa0682780 | 0.864459 | 1.198071e-64 | -8.615850e-47 |
| Msa0187690 | Msa0682780 | 0.801571 | 8.456164e-49 | -8.615850e-47 |
| Msa0187930 | Msa0682780 | 0.829858 | 4.068678e-55 | -8.615850e-47 |
| Msa0193120 | Msa0682780 | 0.813079 | 3.068681e-51 | -8.615850e-47 |
| Msa0194480 | Msa0682780 | 0.820045 | 8.441123e-53 | -8.615850e-47 |
| Msa0194540 | Msa0682780 | 0.832778 | 7.783922e-56 | -8.615850e-47 |
| Msa0199690 | Msa0682780 | 0.875050 | 4.179814e-68 | -8.615850e-47 |
| Msa0211840 | Msa0682780 | 0.816776 | 4.645689e-52 | -8.615850e-47 |
| Msa0225740 | Msa0682780 | 0.811397 | 7.145818e-51 | -8.615850e-47 |
| Msa0230550 | Msa0682780 | -0.819095 | 1.390280e-52 | -8.615850e-47 |
| Msa0231880 | Msa0682780 | 0.830521 | 2.802897e-55 | -8.615850e-47 |
| Msa0236270 | Msa0682780 | 0.812040 | 5.177701e-51 | -8.615850e-47 |
| Msa0236980 | Msa0682780 | 0.825088 | 5.671483e-54 | -8.615850e-47 |
| Msa0369050 | Msa0682780 | 0.832441 | 9.437539e-56 | -8.615850e-47 |
| Msa0372670 | Msa0682780 | 0.808347 | 3.238446e-50 | -8.615850e-47 |
| Msa0376690 | Msa0682780 | 0.823599 | 1.269739e-53 | -8.615850e-47 |
| Msa0380040 | Msa0682780 | 0.814994 | 1.160450e-51 | -8.615850e-47 |
| Msa0394400 | Msa0682780 | 0.829202 | 5.872879e-55 | -8.615850e-47 |
| Msa0402330 | Msa0682780 | 0.858524 | 7.767963e-63 | -8.615850e-47 |
| Msa0413450 | Msa0682780 | 0.809925 | 1.486712e-50 | -8.615850e-47 |
| Msa0424920 | Msa0682780 | 0.826782 | 2.245568e-54 | -8.615850e-47 |
| Msa0425220 | Msa0682780 | 0.811619 | 6.395145e-51 | -8.615850e-47 |
| Msa0427200 | Msa0682780 | 0.808823 | 2.563423e-50 | -8.615850e-47 |
| Msa0429290 | Msa0682780 | 0.828631 | 8.075137e-55 | -8.615850e-47 |
| Msa0458060 | Msa0682780 | 0.803568 | 3.275567e-49 | -8.615850e-47 |
| Msa0471590 | Msa0682780 | 0.829979 | 3.800823e-55 | -8.615850e-47 |
| Msa0475580 | Msa0682780 | 0.816928 | 4.293895e-52 | -8.615850e-47 |
| Msa0481480 | Msa0682780 | 0.820434 | 6.874215e-53 | -8.615850e-47 |
| Msa0241780 | Msa0682780 | 0.806347 | 8.595621e-50 | -8.615850e-47 |
| Msa0242230 | Msa0682780 | 0.827724 | 1.335801e-54 | -8.615850e-47 |
| Msa0242680 | Msa0682780 | 0.806525 | 7.885508e-50 | -8.615850e-47 |
| Msa0244780 | Msa0682780 | 0.824521 | 7.714899e-54 | -8.615850e-47 |
| Msa0260210 | Msa0682780 | 0.814498 | 1.494261e-51 | -8.615850e-47 |
| Msa0260240 | Msa0682780 | 0.816623 | 5.025936e-52 | -8.615850e-47 |
| Msa0260280 | Msa0682780 | 0.816658 | 4.936902e-52 | -8.615850e-47 |
| Msa0262310 | Msa0682780 | 0.815491 | 8.995304e-52 | -8.615850e-47 |
| Msa0264570 | Msa0682780 | 0.822936 | 1.814337e-53 | -8.615850e-47 |
| Msa0268130 | Msa0682780 | 0.834466 | 2.948632e-56 | -8.615850e-47 |
| Msa0280430 | Msa0682780 | 0.850951 | 1.217934e-60 | -8.615850e-47 |
| Msa0280900 | Msa0682780 | 0.800237 | 1.583497e-48 | -8.615850e-47 |
| Msa0291520 | Msa0682780 | 0.810174 | 1.313990e-50 | -8.615850e-47 |
| Msa0298990 | Msa0682780 | 0.823528 | 1.319387e-53 | -8.615850e-47 |
| Msa0304260 | Msa0682780 | 0.815998 | 6.935561e-52 | -8.615850e-47 |
| Msa0304290 | Msa0682780 | 0.817049 | 4.033628e-52 | -8.615850e-47 |
| Msa0304300 | Msa0682780 | 0.806909 | 6.543742e-50 | -8.615850e-47 |
| Msa0304330 | Msa0682780 | 0.822564 | 2.214124e-53 | -8.615850e-47 |
| Msa0304590 | Msa0682780 | 0.845349 | 4.292755e-59 | -8.615850e-47 |
| Msa0304660 | Msa0682780 | 0.835322 | 1.794642e-56 | -8.615850e-47 |
| Msa0320100 | Msa0682780 | 0.824262 | 8.878830e-54 | -8.615850e-47 |
| Msa0324550 | Msa0682780 | 0.807837 | 4.159244e-50 | -8.615850e-47 |
| Msa0331700 | Msa0682780 | 0.836838 | 7.399014e-57 | -8.615850e-47 |
| Msa0337650 | Msa0682780 | 0.818351 | 2.051480e-52 | -8.615850e-47 |
| Msa0347680 | Msa0682780 | 0.812352 | 4.427918e-51 | -8.615850e-47 |
| Msa0355270 | Msa0682780 | 0.863367 | 2.619060e-64 | -8.615850e-47 |
| Msa0508590 | Msa0682780 | 0.848168 | 7.279813e-60 | -8.615850e-47 |
| Msa0508630 | Msa0682780 | 0.858307 | 9.013012e-63 | -8.615850e-47 |
| Msa0509390 | Msa0682780 | 0.817782 | 2.758299e-52 | -8.615850e-47 |
| Msa0513440 | Msa0682780 | 0.803899 | 2.796756e-49 | -8.615850e-47 |
| Msa0519220 | Msa0682780 | 0.814148 | 1.785664e-51 | -8.615850e-47 |
| Msa0521880 | Msa0682780 | 0.801458 | 8.918887e-49 | -8.615850e-47 |
| Msa0526540 | Msa0682780 | 0.823081 | 1.678039e-53 | -8.615850e-47 |
| Msa0526890 | Msa0682780 | 0.806829 | 6.801433e-50 | -8.615850e-47 |
| Msa0535030 | Msa0682780 | 0.827657 | 1.386408e-54 | -8.615850e-47 |
| Msa0535060 | Msa0682780 | 0.822222 | 2.658827e-53 | -8.615850e-47 |
| Msa0541860 | Msa0682780 | 0.862962 | 3.494973e-64 | -8.615850e-47 |
| Msa0547360 | Msa0682780 | 0.808091 | 3.672551e-50 | -8.615850e-47 |
| Msa0552810 | Msa0682780 | 0.848673 | 5.277179e-60 | -8.615850e-47 |
| Msa0553220 | Msa0682780 | -0.800394 | 1.471285e-48 | -8.615850e-47 |
| Msa0561430 | Msa0682780 | 0.800651 | 1.304115e-48 | -8.615850e-47 |
| Msa0561540 | Msa0682780 | -0.822954 | 1.796643e-53 | -8.615850e-47 |
| Msa0568820 | Msa0682780 | 0.827058 | 1.929187e-54 | -8.615850e-47 |
| Msa0576940 | Msa0682780 | 0.826093 | 3.278213e-54 | -8.615850e-47 |
| Msa0577940 | Msa0682780 | -0.807337 | 5.310850e-50 | -8.615850e-47 |
| Msa0578040 | Msa0682780 | 0.806094 | 9.718180e-50 | -8.615850e-47 |
| Msa0581070 | Msa0682780 | 0.840493 | 8.412768e-58 | -8.615850e-47 |
| Msa0590680 | Msa0682780 | 0.802240 | 6.161347e-49 | -8.615850e-47 |
| Msa0591060 | Msa0682780 | 0.816445 | 5.508937e-52 | -8.615850e-47 |
| Msa0591770 | Msa0682780 | 0.812510 | 4.087641e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0682780 | MtrunA17_Chr4g0029171 | 98.765 | 81 | 1 | 0 | 1 | 81 | 1 | 81 | 9.27e-55 | 164 |
| Msa0682780 | MtrunA17_Chr4g0029141 | 100.000 | 39 | 0 | 0 | 43 | 81 | 4 | 42 | 1.27e-23 | 84.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0682780 | AT2G28430.1 | 58.824 | 85 | 31 | 1 | 1 | 81 | 1 | 85 | 5.53e-27 | 94.4 |
Find 36 sgRNAs with CRISPR-Local
Find 145 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATGTTCTCAATTTGCTTC+TGG | 0.144685 | 4_4:+44820176 | None:intergenic |
| CTGACGAGTGAATCATTTAT+TGG | 0.159078 | 4_4:+44817857 | None:intergenic |
| GCGTGATTTCTTCCCAAATA+TGG | 0.182570 | 4_4:+44818210 | None:intergenic |
| CAGGTTAGAGAACCCATATT+TGG | 0.233893 | 4_4:-44818223 | Msa0682780:CDS |
| CAAAGGCGCTTCTACAGAAT+TGG | 0.295583 | 4_4:+44820233 | None:intergenic |
| CAGAGGTCGGTAAAGTTCTT+AGG | 0.305126 | 4_4:+44817916 | None:intergenic |
| GCTCTGAATTTGCACATTCA+TGG | 0.316978 | 4_4:-44818189 | Msa0682780:CDS |
| ATGGTTTCAGGAGCGATTAT+TGG | 0.335605 | 4_4:-44820034 | Msa0682780:intron |
| GCGATTATTGGGAGCTTCAT+TGG | 0.346924 | 4_4:-44820022 | Msa0682780:CDS |
| TGGTTTCAGGAGCGATTATT+GGG | 0.372845 | 4_4:-44820033 | Msa0682780:intron |
| CGTGATTTCTTCCCAAATAT+GGG | 0.389780 | 4_4:+44818211 | None:intergenic |
| CGATTATTGGGAGCTTCATT+GGG | 0.391789 | 4_4:-44820021 | Msa0682780:CDS |
| TGGGGTAAGAGAGTAATTCT+AGG | 0.392288 | 4_4:-44820274 | Msa0682780:five_prime_UTR |
| CGATTCTCAATCTCACTCTC+AGG | 0.403771 | 4_4:-44819938 | Msa0682780:intron |
| CTACAGAATTGGGATATTGT+TGG | 0.404003 | 4_4:+44820244 | None:intergenic |
| TATTGACGACTGCGGTTGTA+TGG | 0.418342 | 4_4:-44819993 | Msa0682780:CDS |
| AAAACTGTGGATCAGACATT+TGG | 0.438395 | 4_4:-44818163 | Msa0682780:CDS |
| AGGTTAGAGAACCCATATTT+GGG | 0.439141 | 4_4:-44818222 | Msa0682780:CDS |
| GATCAACGTAGATACATCTA+TGG | 0.441067 | 4_4:-44819970 | Msa0682780:CDS |
| AAAGGCGCTTCTACAGAATT+GGG | 0.486657 | 4_4:+44820234 | None:intergenic |
| CTGAGAGTGAGATTGAGAAT+CGG | 0.514763 | 4_4:+44819939 | None:intergenic |
| ATTACATTCGTAAGCACCAC+TGG | 0.549435 | 4_4:+44817998 | None:intergenic |
| ATTGACGACTGCGGTTGTAT+GGG | 0.569764 | 4_4:-44819992 | Msa0682780:CDS |
| ATAAAGTCTCTCAGCTCTCG+TGG | 0.589441 | 4_4:-44818133 | Msa0682780:CDS |
| AGTCTCTCAGCTCTCGTGGA+TGG | 0.592923 | 4_4:-44818129 | Msa0682780:CDS |
| CACGACGTCGTTTCTCACAA+AGG | 0.602514 | 4_4:+44820216 | None:intergenic |
| GAGCTGAGAGACTTTATCAA+AGG | 0.630771 | 4_4:+44818139 | None:intergenic |
| ACAATAGTACCAACGTTCAG+AGG | 0.644232 | 4_4:+44817899 | None:intergenic |
| TAGTACCAACGTTCAGAGGT+CGG | 0.652939 | 4_4:+44817903 | None:intergenic |
| CTTTACCGACCTCTGAACGT+TGG | 0.653170 | 4_4:-44817908 | Msa0682780:three_prime_UTR |
| GATGATTAGCATTCTCACAC+AGG | 0.653799 | 4_4:-44820130 | Msa0682780:intron |
| CTTTGTGAGAAACGACGTCG+TGG | 0.698718 | 4_4:-44820215 | Msa0682780:five_prime_UTR |
| CGAACAGCTGTGTACACCAG+TGG | 0.709924 | 4_4:-44818014 | Msa0682780:three_prime_UTR |
| GGGTGTGATATTGACGACTG+CGG | 0.720978 | 4_4:-44820001 | Msa0682780:CDS |
| GATTGTGATATCAGAACATG+CGG | 0.722005 | 4_4:-44818079 | Msa0682780:three_prime_UTR |
| ACATTCATGGAACAAAACTG+TGG | 0.759348 | 4_4:-44818176 | Msa0682780:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAGAAAAATATTTTTTCT+GGG | - | chr4_4:44817893-44817912 | Msa0682780:three_prime_UTR | 10.0% |
| !!! | CTATTTTATTTTTGAAATTT+TGG | - | chr4_4:44818309-44818328 | Msa0682780:intron | 10.0% |
| !!! | GAAAAGAAAAATATTTTTTC+TGG | - | chr4_4:44817892-44817911 | Msa0682780:three_prime_UTR | 15.0% |
| !!! | AAAGAAAAATATTTTTTCTG+GGG | - | chr4_4:44817894-44817913 | Msa0682780:three_prime_UTR | 15.0% |
| !!! | ATTTTTGAAATTTTGGTAAT+TGG | - | chr4_4:44818316-44818335 | Msa0682780:intron | 15.0% |
| !!! | TAGTTTCTTTTATAGTTTTT+CGG | + | chr4_4:44818818-44818837 | None:intergenic | 15.0% |
| !!! | ATAGCATAATTTGTTTTTAT+AGG | - | chr4_4:44819184-44819203 | Msa0682780:intron | 15.0% |
| !!! | TTCCATTGATATTATATTTT+CGG | - | chr4_4:44819804-44819823 | Msa0682780:intron | 15.0% |
| !!! | TGAATTTTGATTTGTTGAAA+TGG | - | chr4_4:44818133-44818152 | Msa0682780:CDS | 20.0% |
| !!! | TTATTTTCATAAGTTCTCAA+CGG | - | chr4_4:44818485-44818504 | Msa0682780:intron | 20.0% |
| !! | TTTGTTCTATTATTAGTCAA+AGG | + | chr4_4:44819424-44819443 | None:intergenic | 20.0% |
| !!! | TTTTAAAAAGATCTCTCATT+TGG | + | chr4_4:44819492-44819511 | None:intergenic | 20.0% |
| !!! | AGAGATCTTTTTAAAATTTG+AGG | - | chr4_4:44819496-44819515 | Msa0682780:intron | 20.0% |
| !!! | ACTTTTATATTCGCAATTAT+AGG | + | chr4_4:44819638-44819657 | None:intergenic | 20.0% |
| !! | ATCCGAAAATATAATATCAA+TGG | + | chr4_4:44819809-44819828 | None:intergenic | 20.0% |
| !! | TTCCACTCTATTATCTTTTT+AGG | + | chr4_4:44817875-44817894 | None:intergenic | 25.0% |
| ! | CACTAGAAAACCATTAAAAA+AGG | + | chr4_4:44818279-44818298 | None:intergenic | 25.0% |
| !! | TAATTGGCAATACATTGATT+GGG | - | chr4_4:44818332-44818351 | Msa0682780:intron | 25.0% |
| !! | ATACACAAATGGAAGATTTT+GGG | - | chr4_4:44818569-44818588 | Msa0682780:intron | 25.0% |
| ! | TGACTTTATGTTAGAAAAGA+TGG | - | chr4_4:44818681-44818700 | Msa0682780:intron | 25.0% |
| ! | GACATGTAGATTCTTTAATA+TGG | - | chr4_4:44818743-44818762 | Msa0682780:intron | 25.0% |
| ! | AATATGGAGAATAGATTAGA+TGG | - | chr4_4:44818759-44818778 | Msa0682780:intron | 25.0% |
| !! | TCTCACTTTATTTCATCATT+TGG | - | chr4_4:44818892-44818911 | Msa0682780:intron | 25.0% |
| ! | TTTATACATATGCACTTGTA+TGG | - | chr4_4:44818989-44819008 | Msa0682780:intron | 25.0% |
| ! | TTCAATGCATATAACATAAG+TGG | + | chr4_4:44819162-44819181 | None:intergenic | 25.0% |
| !!! | GCATAATTTGTTTTTATAGG+TGG | - | chr4_4:44819187-44819206 | Msa0682780:intron | 25.0% |
| ! | ACATAGATGAATTCCAAATA+TGG | - | chr4_4:44819231-44819250 | Msa0682780:intron | 25.0% |
| !!! | GTTTTAAAACTCCTTTAAGT+TGG | + | chr4_4:44819265-44819284 | None:intergenic | 25.0% |
| ! | CAGAAGTGAATTTCAAATTA+TGG | - | chr4_4:44819521-44819540 | Msa0682780:intron | 25.0% |
| ! | TTCAAAGTCATTGAAAGAAA+GGG | + | chr4_4:44819774-44819793 | None:intergenic | 25.0% |
| ! | ATTCAAAGTCATTGAAAGAA+AGG | + | chr4_4:44819775-44819794 | None:intergenic | 25.0% |
| !! | TAACTTTGCATTTGAAATAC+TGG | - | chr4_4:44819843-44819862 | Msa0682780:intron | 25.0% |
| !! | AACTTTGCATTTGAAATACT+GGG | - | chr4_4:44819844-44819863 | Msa0682780:intron | 25.0% |
| ! | AGTTCTTAGGAAGAAAAATT+GGG | + | chr4_4:44820260-44820279 | None:intergenic | 25.0% |
| ! | AAGTTCTTAGGAAGAAAAAT+TGG | + | chr4_4:44820261-44820280 | None:intergenic | 25.0% |
| !!! | TCGTTTCGTGTTGATTTTTT+CGG | + | chr4_4:44818038-44818057 | None:intergenic | 30.0% |
| !! | TGATTTGTTGAAATGGTTTC+AGG | - | chr4_4:44818140-44818159 | Msa0682780:CDS | 30.0% |
| !!! | TCAGGTTCAACCTTTTTTAA+TGG | - | chr4_4:44818266-44818285 | Msa0682780:intron | 30.0% |
| GTAATTGGCAATACATTGAT+TGG | - | chr4_4:44818331-44818350 | Msa0682780:intron | 30.0% | |
| ATTTGTGTATGTGTTTCATG+TGG | + | chr4_4:44818559-44818578 | None:intergenic | 30.0% | |
| ACATGAAACACATACACAAA+TGG | - | chr4_4:44818558-44818577 | Msa0682780:intron | 30.0% | |
| ! | CATACACAAATGGAAGATTT+TGG | - | chr4_4:44818568-44818587 | Msa0682780:intron | 30.0% |
| GATATCCAACCTAACAAATT+CGG | - | chr4_4:44818612-44818631 | Msa0682780:intron | 30.0% | |
| CTTTATGTTAGAAAAGATGG+TGG | - | chr4_4:44818684-44818703 | Msa0682780:intron | 30.0% | |
| AGATCTAGAGATTAATGAGT+TGG | - | chr4_4:44818846-44818865 | Msa0682780:intron | 30.0% | |
| ! | TAATGAGTTGGATAGAGATA+TGG | - | chr4_4:44818858-44818877 | Msa0682780:intron | 30.0% |
| !! | ACAAAGACAAAAGCTTTGTT+TGG | + | chr4_4:44819054-44819073 | None:intergenic | 30.0% |
| CTGGATTGTAATGAATTGTA+AGG | - | chr4_4:44819097-44819116 | Msa0682780:intron | 30.0% | |
| TGTAATGAATTGTAAGGTGA+AGG | - | chr4_4:44819103-44819122 | Msa0682780:intron | 30.0% | |
| GTAATGAATTGTAAGGTGAA+GGG | - | chr4_4:44819104-44819123 | Msa0682780:intron | 30.0% | |
| ! | GGCTGAACATACAATTTTAT+TGG | - | chr4_4:44819208-44819227 | Msa0682780:intron | 30.0% |
| GTTGGAAACAAATCCATATT+TGG | + | chr4_4:44819247-44819266 | None:intergenic | 30.0% | |
| ! | TGGATTTGTTTCCAACTTAA+AGG | - | chr4_4:44819251-44819270 | Msa0682780:intron | 30.0% |
| !! | AAAGAAAGGGGTATTAAGTT+AGG | + | chr4_4:44819761-44819780 | None:intergenic | 30.0% |
| TCAAAGTCATTGAAAGAAAG+GGG | + | chr4_4:44819773-44819792 | None:intergenic | 30.0% | |
| ! | ATTATATTTTCGGATTCCAC+AGG | - | chr4_4:44819814-44819833 | Msa0682780:intron | 30.0% |
| ACATGAAATTCATAAGACAG+TGG | + | chr4_4:44819897-44819916 | None:intergenic | 30.0% | |
| CGCCTAAAAAGATAATAGAG+TGG | - | chr4_4:44817870-44817889 | Msa0682780:three_prime_UTR | 35.0% | |
| CTACAGAATTGGGATATTGT+TGG | + | chr4_4:44817945-44817964 | None:intergenic | 35.0% | |
| ! | CAATGTTCTCAATTTGCTTC+TGG | + | chr4_4:44818013-44818032 | None:intergenic | 35.0% |
| GATCAACGTAGATACATCTA+TGG | - | chr4_4:44818216-44818235 | Msa0682780:CDS | 35.0% | |
| TCAAATAAGCGAATCCAAAC+AGG | + | chr4_4:44818402-44818421 | None:intergenic | 35.0% | |
| !! | AAACACCGAATTTGTTAGGT+TGG | + | chr4_4:44818620-44818639 | None:intergenic | 35.0% |
| ! | CCAAAAACACCGAATTTGTT+AGG | + | chr4_4:44818624-44818643 | None:intergenic | 35.0% |
| !!! | CCTAACAAATTCGGTGTTTT+TGG | - | chr4_4:44818621-44818640 | Msa0682780:intron | 35.0% |
| ATGGAGAATAGATTAGATGG+AGG | - | chr4_4:44818762-44818781 | Msa0682780:intron | 35.0% | |
| TGGAGAATAGATTAGATGGA+GGG | - | chr4_4:44818763-44818782 | Msa0682780:intron | 35.0% | |
| !! | AAAAGCATTATCCCACTAAG+TGG | + | chr4_4:44818933-44818952 | None:intergenic | 35.0% |
| !! | GCATGATCTGAAGTTTTCTA+AGG | - | chr4_4:44819074-44819093 | Msa0682780:intron | 35.0% |
| AGGTGATAGACACTAATAGT+CGG | - | chr4_4:44819328-44819347 | Msa0682780:intron | 35.0% | |
| TTCATAGGTTTGTGCTAGTT+AGG | + | chr4_4:44819557-44819576 | None:intergenic | 35.0% | |
| AGGTTAGAGAACCCATATTT+GGG | - | chr4_4:44819964-44819983 | Msa0682780:CDS | 35.0% | |
| CGTGATTTCTTCCCAAATAT+GGG | + | chr4_4:44819978-44819997 | None:intergenic | 35.0% | |
| ACATTCATGGAACAAAACTG+TGG | - | chr4_4:44820010-44820029 | Msa0682780:CDS | 35.0% | |
| AAAACTGTGGATCAGACATT+TGG | - | chr4_4:44820023-44820042 | Msa0682780:CDS | 35.0% | |
| GATTGTGATATCAGAACATG+CGG | - | chr4_4:44820107-44820126 | Msa0682780:intron | 35.0% | |
| TGGGGTAAGAGAGTAATTCT+AGG | - | chr4_4:44817912-44817931 | Msa0682780:three_prime_UTR | 40.0% | |
| !! | AAAGGCGCTTCTACAGAATT+GGG | + | chr4_4:44817955-44817974 | None:intergenic | 40.0% |
| GATGATTAGCATTCTCACAC+AGG | - | chr4_4:44818056-44818075 | Msa0682780:three_prime_UTR | 40.0% | |
| ATGGTTTCAGGAGCGATTAT+TGG | - | chr4_4:44818152-44818171 | Msa0682780:CDS | 40.0% | |
| TGGTTTCAGGAGCGATTATT+GGG | - | chr4_4:44818153-44818172 | Msa0682780:CDS | 40.0% | |
| CGATTATTGGGAGCTTCATT+GGG | - | chr4_4:44818165-44818184 | Msa0682780:CDS | 40.0% | |
| CTGAGAGTGAGATTGAGAAT+CGG | + | chr4_4:44818250-44818269 | None:intergenic | 40.0% | |
| GGAATGATTCGAGTGTTAGA+GGG | - | chr4_4:44818353-44818372 | Msa0682780:intron | 40.0% | |
| TGTATGTGCTTAGACCTGTT+TGG | - | chr4_4:44818385-44818404 | Msa0682780:intron | 40.0% | |
| !! | GAAGATTTTGGGTGTGAACT+CGG | - | chr4_4:44818580-44818599 | Msa0682780:intron | 40.0% |
| !! | AAGATTTTGGGTGTGAACTC+GGG | - | chr4_4:44818581-44818600 | Msa0682780:intron | 40.0% |
| !! | TTTGTTAGGTTGGATATCCG+TGG | + | chr4_4:44818610-44818629 | None:intergenic | 40.0% |
| GCATGTTCAAACTACCTAAG+CGG | + | chr4_4:44818715-44818734 | None:intergenic | 40.0% | |
| AGTGAAATCACTAGAGGTTG+AGG | - | chr4_4:44818787-44818806 | Msa0682780:intron | 40.0% | |
| ATTATCCCACTAAGTGGAGT+CGG | + | chr4_4:44818927-44818946 | None:intergenic | 40.0% | |
| !!! | GATCTGAAGTTTTCTAAGGC+TGG | - | chr4_4:44819078-44819097 | Msa0682780:intron | 40.0% |
| CATATGGGGAAATGAGTATC+AGG | + | chr4_4:44819386-44819405 | None:intergenic | 40.0% | |
| GATACTCATTTCCCCATATG+TGG | - | chr4_4:44819386-44819405 | Msa0682780:intron | 40.0% | |
| ! | TTAGTCAAAGGCTGACTCAA+TGG | + | chr4_4:44819412-44819431 | None:intergenic | 40.0% |
| ! | ACACAAACATGAAGAGTGTG+TGG | - | chr4_4:44819589-44819608 | Msa0682780:intron | 40.0% |
| ! | CACAAACATGAAGAGTGTGT+GGG | - | chr4_4:44819590-44819609 | Msa0682780:intron | 40.0% |
| CAACACAACTCTAACGCATA+TGG | + | chr4_4:44819673-44819692 | None:intergenic | 40.0% | |
| CATATGCGTTAGAGTTGTGT+TGG | - | chr4_4:44819671-44819690 | Msa0682780:intron | 40.0% | |
| ATTCATAAGACAGTGGTGAG+TGG | + | chr4_4:44819890-44819909 | None:intergenic | 40.0% | |
| TTCAGCTTTCATGTTTCACC+AGG | - | chr4_4:44819944-44819963 | Msa0682780:CDS | 40.0% | |
| CAAATATGGGTTCTCTAACC+TGG | + | chr4_4:44819965-44819984 | None:intergenic | 40.0% | |
| CAGGTTAGAGAACCCATATT+TGG | - | chr4_4:44819963-44819982 | Msa0682780:CDS | 40.0% | |
| GCGTGATTTCTTCCCAAATA+TGG | + | chr4_4:44819979-44819998 | None:intergenic | 40.0% | |
| ! | GCTCTGAATTTGCACATTCA+TGG | - | chr4_4:44819997-44820016 | Msa0682780:CDS | 40.0% |
| GAGCTGAGAGACTTTATCAA+AGG | + | chr4_4:44820050-44820069 | None:intergenic | 40.0% | |
| ATTACATTCGTAAGCACCAC+TGG | + | chr4_4:44820191-44820210 | None:intergenic | 40.0% | |
| ACAATAGTACCAACGTTCAG+AGG | + | chr4_4:44820290-44820309 | None:intergenic | 40.0% | |
| !! | CAAAGGCGCTTCTACAGAAT+TGG | + | chr4_4:44817956-44817975 | None:intergenic | 45.0% |
| GCGATTATTGGGAGCTTCAT+TGG | - | chr4_4:44818164-44818183 | Msa0682780:CDS | 45.0% | |
| TATTGACGACTGCGGTTGTA+TGG | - | chr4_4:44818193-44818212 | Msa0682780:CDS | 45.0% | |
| ATTGACGACTGCGGTTGTAT+GGG | - | chr4_4:44818194-44818213 | Msa0682780:CDS | 45.0% | |
| CGATTCTCAATCTCACTCTC+AGG | - | chr4_4:44818248-44818267 | Msa0682780:intron | 45.0% | |
| GGGAATGATTCGAGTGTTAG+AGG | - | chr4_4:44818352-44818371 | Msa0682780:intron | 45.0% | |
| GAGGGTAGTGAAATCACTAG+AGG | - | chr4_4:44818781-44818800 | Msa0682780:intron | 45.0% | |
| AGACACTAATAGTCGGTGTG+CGG | - | chr4_4:44819335-44819354 | Msa0682780:intron | 45.0% | |
| TGACTCAATGGCCACATATG+GGG | + | chr4_4:44819400-44819419 | None:intergenic | 45.0% | |
| CTGACTCAATGGCCACATAT+GGG | + | chr4_4:44819401-44819420 | None:intergenic | 45.0% | |
| TGTCAGCTTCAGTGCTTCAT+AGG | + | chr4_4:44819572-44819591 | None:intergenic | 45.0% | |
| TGCAACATCGGAACTCTTCA+AGG | + | chr4_4:44819727-44819746 | None:intergenic | 45.0% | |
| GAAGAGTTCCGATGTTGCAT+AGG | - | chr4_4:44819728-44819747 | Msa0682780:intron | 45.0% | |
| GTGTTGAGCCTATGCAACAT+CGG | + | chr4_4:44819739-44819758 | None:intergenic | 45.0% | |
| TGCAAAGTTACTCAAGCCTG+TGG | + | chr4_4:44819833-44819852 | None:intergenic | 45.0% | |
| ATAAAGTCTCTCAGCTCTCG+TGG | - | chr4_4:44820053-44820072 | Msa0682780:intron | 45.0% | |
| CAGAGGTCGGTAAAGTTCTT+AGG | + | chr4_4:44820273-44820292 | None:intergenic | 45.0% | |
| TAGTACCAACGTTCAGAGGT+CGG | + | chr4_4:44820286-44820305 | None:intergenic | 45.0% | |
| CACGACGTCGTTTCTCACAA+AGG | + | chr4_4:44817973-44817992 | None:intergenic | 50.0% | |
| CTTTGTGAGAAACGACGTCG+TGG | - | chr4_4:44817971-44817990 | Msa0682780:three_prime_UTR | 50.0% | |
| GGGTGTGATATTGACGACTG+CGG | - | chr4_4:44818185-44818204 | Msa0682780:CDS | 50.0% | |
| !! | AGATGGTGGAAACTCCGCTT+AGG | - | chr4_4:44818698-44818717 | Msa0682780:intron | 50.0% |
| TCTTGTGCGTGTAGCTCAGT+TGG | - | chr4_4:44819304-44819323 | Msa0682780:intron | 50.0% | |
| GACACTAATAGTCGGTGTGC+GGG | - | chr4_4:44819336-44819355 | Msa0682780:intron | 50.0% | |
| TAATAGTCGGTGTGCGGGTT+TGG | - | chr4_4:44819341-44819360 | Msa0682780:intron | 50.0% | |
| ! | GCTGACTCAATGGCCACATA+TGG | + | chr4_4:44819402-44819421 | None:intergenic | 50.0% |
| GGAACTCTTCAAGGTGCGTT+CGG | + | chr4_4:44819718-44819737 | None:intergenic | 50.0% | |
| CTTTACCGACCTCTGAACGT+TGG | - | chr4_4:44820278-44820297 | Msa0682780:five_prime_UTR | 50.0% | |
| ACTAAGTGGAGTCGGCGACA+TGG | + | chr4_4:44818919-44818938 | None:intergenic | 55.0% | |
| !! | ATGTCGCCGACTCCACTTAG+TGG | - | chr4_4:44818918-44818937 | Msa0682780:intron | 55.0% |
| !! | TGTCGCCGACTCCACTTAGT+GGG | - | chr4_4:44818919-44818938 | Msa0682780:intron | 55.0% |
| GTGCGTGTAGCTCAGTTGGT+AGG | - | chr4_4:44819308-44819327 | Msa0682780:intron | 55.0% | |
| TCAGGAATGCAGCGCAATGC+AGG | + | chr4_4:44819368-44819387 | None:intergenic | 55.0% | |
| GGGCACAACACGTGACACAT+AGG | - | chr4_4:44819610-44819629 | Msa0682780:intron | 55.0% | |
| AGTCTCTCAGCTCTCGTGGA+TGG | - | chr4_4:44820057-44820076 | Msa0682780:intron | 55.0% | |
| CGAACAGCTGTGTACACCAG+TGG | - | chr4_4:44820172-44820191 | Msa0682780:five_prime_UTR | 55.0% | |
| GGTGTGAACTCGGGACACCA+CGG | - | chr4_4:44818590-44818609 | Msa0682780:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 44817866 | 44820342 | 44817866 | ID=Msa0682780;Name=Msa0682780 |
| chr4_4 | mRNA | 44817866 | 44820342 | 44817866 | ID=Msa0682780-mRNA-1;Parent=Msa0682780;Name=Msa0682780-mRNA-1;_AED=0.13;_eAED=0.13;_QI=191|1|1|1|1|1|3|260|81 |
| chr4_4 | exon | 44817866 | 44818242 | 44817866 | ID=Msa0682780-mRNA-1:exon:10857;Parent=Msa0682780-mRNA-1 |
| chr4_4 | exon | 44819939 | 44820046 | 44819939 | ID=Msa0682780-mRNA-1:exon:10856;Parent=Msa0682780-mRNA-1 |
| chr4_4 | exon | 44820131 | 44820342 | 44820131 | ID=Msa0682780-mRNA-1:exon:10855;Parent=Msa0682780-mRNA-1 |
| chr4_4 | five_prime_UTR | 44820152 | 44820342 | 44820152 | ID=Msa0682780-mRNA-1:five_prime_utr;Parent=Msa0682780-mRNA-1 |
| chr4_4 | CDS | 44820131 | 44820151 | 44820131 | ID=Msa0682780-mRNA-1:cds;Parent=Msa0682780-mRNA-1 |
| chr4_4 | CDS | 44819939 | 44820046 | 44819939 | ID=Msa0682780-mRNA-1:cds;Parent=Msa0682780-mRNA-1 |
| chr4_4 | CDS | 44818126 | 44818242 | 44818126 | ID=Msa0682780-mRNA-1:cds;Parent=Msa0682780-mRNA-1 |
| chr4_4 | three_prime_UTR | 44817866 | 44818125 | 44817866 | ID=Msa0682780-mRNA-1:three_prime_utr;Parent=Msa0682780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
