Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1207420 | G7JIX8 | 93.131 | 757 | 48 | 2 | 1 | 756 | 1 | 754 | 0.0 | 1409 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014800 | Msa1207420 | 0.800866 | 1.178849e-48 | -8.615850e-47 |
| Msa0029850 | Msa1207420 | 0.833552 | 4.994477e-56 | -8.615850e-47 |
| Msa0033440 | Msa1207420 | 0.804461 | 2.136216e-49 | -8.615850e-47 |
| Msa0048000 | Msa1207420 | 0.807683 | 4.485029e-50 | -8.615850e-47 |
| Msa0057520 | Msa1207420 | 0.810018 | 1.419829e-50 | -8.615850e-47 |
| Msa0071550 | Msa1207420 | 0.803319 | 3.689862e-49 | -8.615850e-47 |
| Msa0077180 | Msa1207420 | 0.818057 | 2.390140e-52 | -8.615850e-47 |
| Msa0108560 | Msa1207420 | 0.824374 | 8.354778e-54 | -8.615850e-47 |
| Msa0607540 | Msa1207420 | 0.814924 | 1.202364e-51 | -8.615850e-47 |
| Msa0610590 | Msa1207420 | 0.811796 | 5.850902e-51 | -8.615850e-47 |
| Msa0610890 | Msa1207420 | 0.812748 | 3.626389e-51 | -8.615850e-47 |
| Msa0633060 | Msa1207420 | 0.800279 | 1.552590e-48 | -8.615850e-47 |
| Msa0640380 | Msa1207420 | 0.814806 | 1.276969e-51 | -8.615850e-47 |
| Msa0647830 | Msa1207420 | 0.834436 | 3.001011e-56 | -8.615850e-47 |
| Msa0651190 | Msa1207420 | 0.809245 | 2.081069e-50 | -8.615850e-47 |
| Msa0657970 | Msa1207420 | 0.800957 | 1.129473e-48 | -8.615850e-47 |
| Msa0670660 | Msa1207420 | 0.805339 | 1.400528e-49 | -8.615850e-47 |
| Msa0678820 | Msa1207420 | 0.832706 | 8.111851e-56 | -8.615850e-47 |
| Msa0690440 | Msa1207420 | 0.830797 | 2.398126e-55 | -8.615850e-47 |
| Msa0724560 | Msa1207420 | 0.817674 | 2.917930e-52 | -8.615850e-47 |
| Msa0731180 | Msa1207420 | 0.819315 | 1.239109e-52 | -8.615850e-47 |
| Msa0771580 | Msa1207420 | 0.808557 | 2.920560e-50 | -8.615850e-47 |
| Msa0801100 | Msa1207420 | 0.811955 | 5.403591e-51 | -8.615850e-47 |
| Msa0125050 | Msa1207420 | 0.805164 | 1.523438e-49 | -8.615850e-47 |
| Msa0140860 | Msa1207420 | 0.808211 | 3.461444e-50 | -8.615850e-47 |
| Msa0169820 | Msa1207420 | 0.835701 | 1.439994e-56 | -8.615850e-47 |
| Msa0178860 | Msa1207420 | -0.818824 | 1.602478e-52 | -8.615850e-47 |
| Msa0233300 | Msa1207420 | 0.806261 | 8.964247e-50 | -8.615850e-47 |
| Msa0233310 | Msa1207420 | 0.806365 | 8.520534e-50 | -8.615850e-47 |
| Msa0376590 | Msa1207420 | 0.808112 | 3.634412e-50 | -8.615850e-47 |
| Msa0379640 | Msa1207420 | 0.821705 | 3.501989e-53 | -8.615850e-47 |
| Msa0389810 | Msa1207420 | 0.826205 | 3.082705e-54 | -8.615850e-47 |
| Msa0449760 | Msa1207420 | 0.826054 | 3.347965e-54 | -8.615850e-47 |
| Msa0468130 | Msa1207420 | 0.820282 | 7.449582e-53 | -8.615850e-47 |
| Msa0471900 | Msa1207420 | 0.801404 | 9.151110e-49 | -8.615850e-47 |
| Msa0475490 | Msa1207420 | 0.804815 | 1.802554e-49 | -8.615850e-47 |
| Msa0477130 | Msa1207420 | -0.819544 | 1.098265e-52 | -8.615850e-47 |
| Msa0482190 | Msa1207420 | -0.846272 | 2.410003e-59 | -8.615850e-47 |
| Msa0982270 | Msa1207420 | 0.828916 | 6.887882e-55 | -8.615850e-47 |
| Msa0999040 | Msa1207420 | 0.812639 | 3.831995e-51 | -8.615850e-47 |
| Msa1002480 | Msa1207420 | 0.813634 | 2.317155e-51 | -8.615850e-47 |
| Msa1005410 | Msa1207420 | 0.807154 | 5.806829e-50 | -8.615850e-47 |
| Msa1082500 | Msa1207420 | 0.808421 | 3.123017e-50 | -8.615850e-47 |
| Msa1092090 | Msa1207420 | 0.823022 | 1.731897e-53 | -8.615850e-47 |
| Msa1100480 | Msa1207420 | 0.809877 | 1.522617e-50 | -8.615850e-47 |
| Msa0260810 | Msa1207420 | 0.810025 | 1.414693e-50 | -8.615850e-47 |
| Msa0311640 | Msa1207420 | 0.812858 | 3.431058e-51 | -8.615850e-47 |
| Msa0311660 | Msa1207420 | 0.810008 | 1.426949e-50 | -8.615850e-47 |
| Msa0344980 | Msa1207420 | 0.813884 | 2.041406e-51 | -8.615850e-47 |
| Msa1124540 | Msa1207420 | -0.823186 | 1.586030e-53 | -8.615850e-47 |
| Msa1142500 | Msa1207420 | 0.801852 | 7.405168e-49 | -8.615850e-47 |
| Msa1183100 | Msa1207420 | -0.806437 | 8.230941e-50 | -8.615850e-47 |
| Msa1207380 | Msa1207420 | 0.985772 | 1.286446e-164 | -8.615850e-47 |
| Msa1207420 | Msa1217810 | 0.829030 | 6.464027e-55 | -8.615850e-47 |
| Msa1207420 | Msa1233500 | 0.830677 | 2.566285e-55 | -8.615850e-47 |
| Msa1207420 | Msa1257600 | 0.939971 | 5.166042e-100 | -8.615850e-47 |
| Msa1207420 | Msa1258380 | -0.846000 | 2.859094e-59 | -8.615850e-47 |
| Msa1207420 | Msa1287480 | 0.812022 | 5.225581e-51 | -8.615850e-47 |
| Msa1207420 | Msa1304840 | 0.806434 | 8.242596e-50 | -8.615850e-47 |
| Msa1207420 | Msa1307740 | 0.832721 | 8.042573e-56 | -8.615850e-47 |
| Msa1207420 | Msa1314340 | 0.800969 | 1.123172e-48 | -8.615850e-47 |
| Msa1207420 | Msa1382930 | 0.802393 | 5.732279e-49 | -8.615850e-47 |
| Msa1207420 | Msa1396830 | 0.804209 | 2.410748e-49 | -8.615850e-47 |
| Msa1207420 | Msa1404540 | 0.802977 | 4.342952e-49 | -8.615850e-47 |
| Msa1207420 | Msa1407600 | 0.801583 | 8.408424e-49 | -8.615850e-47 |
| Msa1207420 | Msa1444250 | -0.845117 | 4.959062e-59 | -8.615850e-47 |
| Msa1207420 | Msa1451620 | -0.810349 | 1.205031e-50 | -8.615850e-47 |
| Msa1207420 | Msa1454860 | 0.833281 | 5.836754e-56 | -8.615850e-47 |
| Msa1207420 | Msa1464940 | 0.815734 | 7.943602e-52 | -8.615850e-47 |
| Msa0484780 | Msa1207420 | 0.817447 | 3.283002e-52 | -8.615850e-47 |
| Msa0485500 | Msa1207420 | -0.842589 | 2.358061e-58 | -8.615850e-47 |
| Msa0536220 | Msa1207420 | 0.834496 | 2.897996e-56 | -8.615850e-47 |
| Msa0543900 | Msa1207420 | 0.817129 | 3.870878e-52 | -8.615850e-47 |
| Msa0553460 | Msa1207420 | 0.831833 | 1.334202e-55 | -8.615850e-47 |
| Msa0555020 | Msa1207420 | 0.802680 | 5.000268e-49 | -8.615850e-47 |
| Msa0558690 | Msa1207420 | 0.800680 | 1.286430e-48 | -8.615850e-47 |
| Msa0574850 | Msa1207420 | 0.802762 | 4.809628e-49 | -8.615850e-47 |
| Msa0575470 | Msa1207420 | 0.814110 | 1.820145e-51 | -8.615850e-47 |
| Msa0578970 | Msa1207420 | 0.812204 | 4.768394e-51 | -8.615850e-47 |
| Msa0599580 | Msa1207420 | 0.801757 | 7.743539e-49 | -8.615850e-47 |
| Msa0599770 | Msa1207420 | 0.830992 | 2.148450e-55 | -8.615850e-47 |
| Msa0599890 | Msa1207420 | 0.833648 | 4.727324e-56 | -8.615850e-47 |
| Msa0846810 | Msa1207420 | 0.800056 | 1.723803e-48 | -8.615850e-47 |
| Msa0848900 | Msa1207420 | 0.813199 | 2.888659e-51 | -8.615850e-47 |
| Msa0927670 | Msa1207420 | 0.817402 | 3.358996e-52 | -8.615850e-47 |
| Msa0942080 | Msa1207420 | -0.805273 | 1.445582e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1207420 | MtrunA17_Chr4g0056271 | 93.131 | 757 | 48 | 2 | 1 | 756 | 1 | 754 | 0.0 | 1409 |
| Msa1207420 | MtrunA17_Chr4g0056281 | 85.110 | 591 | 84 | 2 | 1 | 589 | 3 | 591 | 0.0 | 1025 |
| Msa1207420 | MtrunA17_Chr4g0056291 | 77.966 | 59 | 13 | 0 | 698 | 756 | 1 | 59 | 9.61e-25 | 97.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1207420 | AT4G17250.1 | 47.067 | 733 | 374 | 8 | 6 | 731 | 3 | 728 | 0.0 | 678 |
| Msa1207420 | AT5G47580.1 | 47.862 | 725 | 364 | 6 | 6 | 723 | 6 | 723 | 0.0 | 656 |
| Msa1207420 | AT4G17250.2 | 49.601 | 627 | 307 | 6 | 6 | 628 | 3 | 624 | 0.0 | 624 |
| Msa1207420 | AT4G17250.3 | 44.811 | 636 | 337 | 8 | 103 | 731 | 1 | 629 | 0.0 | 542 |
Find 123 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCAAACACTTCTCAATATT+TGG | 0.113246 | 8_1:+64879862 | None:intergenic |
| AAAACTTGTTATTGAGTTAT+TGG | 0.157880 | 8_1:-64880025 | Msa1207420:CDS |
| GCACAAATTCTACTAAATTA+AGG | 0.193234 | 8_1:-64879153 | Msa1207420:CDS |
| AGACAAGCAGTTTATGTTCT+TGG | 0.232324 | 8_1:-64879331 | Msa1207420:CDS |
| GAGATGAATTGATGAAATTT+TGG | 0.235831 | 8_1:-64880743 | Msa1207420:CDS |
| ACTTCCTAAACCACCGATTA+TGG | 0.236006 | 8_1:+64880352 | None:intergenic |
| GGTTCTAGCGTTTCGAGTTT+AGG | 0.274993 | 8_1:-64880180 | Msa1207420:CDS |
| TTTGACGGAAACAGCGATTA+TGG | 0.290610 | 8_1:+64881178 | None:intergenic |
| TCAGTTTCATGTACTGCTTC+TGG | 0.302903 | 8_1:-64880678 | Msa1207420:CDS |
| AATAACTCAATAACAAGTTT+TGG | 0.309727 | 8_1:+64880027 | None:intergenic |
| TACCCTATGTGTTGGATCTT+GGG | 0.320599 | 8_1:-64880234 | Msa1207420:CDS |
| GGTGATAATTGCTGATATAT+TGG | 0.324339 | 8_1:-64879434 | Msa1207420:CDS |
| TTACCCTATGTGTTGGATCT+TGG | 0.340486 | 8_1:-64880235 | Msa1207420:CDS |
| CTGGTGTTATCTATGAGTTT+TGG | 0.346173 | 8_1:-64880953 | Msa1207420:CDS |
| ATTTGTATACAGTTTGTAAC+TGG | 0.348616 | 8_1:-64880972 | Msa1207420:CDS |
| TTCGATCTTATTTGATGTCT+TGG | 0.352328 | 8_1:-64880611 | Msa1207420:CDS |
| GGATCCATAATCGGTGGTTT+AGG | 0.355959 | 8_1:-64880356 | Msa1207420:CDS |
| CACAAATTCTACTAAATTAA+GGG | 0.366106 | 8_1:-64879152 | Msa1207420:CDS |
| GTGTAGAACCTCCATATAAT+TGG | 0.370757 | 8_1:-64879927 | Msa1207420:CDS |
| TGAAACCATGATGAATGTTT+TGG | 0.374188 | 8_1:-64881030 | Msa1207420:CDS |
| GCATCAAAACCCGCAAACTA+TGG | 0.374364 | 8_1:-64881241 | Msa1207420:CDS |
| TCCAAATATTGAGAAGTGTT+TGG | 0.384738 | 8_1:-64879863 | Msa1207420:CDS |
| TGGTGTTATTATGTTTGTTA+TGG | 0.385001 | 8_1:-64880922 | Msa1207420:CDS |
| GAAAATAACATTGACAAAGA+TGG | 0.388204 | 8_1:-64879787 | Msa1207420:CDS |
| ATGGGGAGTGACCAATTATA+TGG | 0.392822 | 8_1:+64879916 | None:intergenic |
| TTGAATCAAGATGTCATAAC+AGG | 0.394357 | 8_1:-64879493 | Msa1207420:CDS |
| AAAGTCTCTCACTAGTGATA+TGG | 0.398070 | 8_1:+64879470 | None:intergenic |
| AAGTAGCTGCTGTTGGTGTT+GGG | 0.416316 | 8_1:-64880524 | Msa1207420:CDS |
| TTATGGATCCGAAAACTAAT+CGG | 0.416338 | 8_1:+64880369 | None:intergenic |
| ATTGGGATGCAACTATTCAT+TGG | 0.418222 | 8_1:-64880074 | Msa1207420:CDS |
| TCTGTTACGTGTTTGAATAC+TGG | 0.424899 | 8_1:-64879379 | Msa1207420:CDS |
| GCAAGGGAACCATAGTTTGC+GGG | 0.425897 | 8_1:+64881232 | None:intergenic |
| TTGGGATGCAACTATTCATT+GGG | 0.426148 | 8_1:-64880073 | Msa1207420:CDS |
| GCTAATTCTATGCCTTCTCT+TGG | 0.426410 | 8_1:-64881068 | Msa1207420:CDS |
| CAAGTAGCTGCTGTTGGTGT+TGG | 0.430580 | 8_1:-64880525 | Msa1207420:CDS |
| GGTTTGTTGCTGTTAGATAT+AGG | 0.434375 | 8_1:-64880479 | Msa1207420:CDS |
| AAAATAACATTGACAAAGAT+GGG | 0.438230 | 8_1:-64879786 | Msa1207420:CDS |
| GGTGTCCAAATGTGAGGAAA+AGG | 0.448572 | 8_1:-64880458 | Msa1207420:CDS |
| TGGAAGGGTATTGGACTGAT+AGG | 0.449136 | 8_1:-64880413 | Msa1207420:CDS |
| TTGCAAGGATTCAAAGGAGT+TGG | 0.456334 | 8_1:-64879985 | Msa1207420:CDS |
| GTGATAATTGCTGATATATT+GGG | 0.460994 | 8_1:-64879433 | Msa1207420:CDS |
| AGCATGGCCTATAAAAGTAT+TGG | 0.464015 | 8_1:-64879557 | Msa1207420:CDS |
| AGCAGTCCTCAATTTATACT+TGG | 0.465661 | 8_1:-64880705 | Msa1207420:CDS |
| AGGTGATGATGAAAGACAAT+TGG | 0.467748 | 8_1:-64880092 | Msa1207420:CDS |
| TAATCGGTGGTTTAGGAAGT+TGG | 0.470451 | 8_1:-64880349 | Msa1207420:CDS |
| ATCTTATTTGATGTCTTGGT+CGG | 0.471584 | 8_1:-64880607 | Msa1207420:CDS |
| ACGAAAGATTAAACATTACA+TGG | 0.473168 | 8_1:-64880859 | Msa1207420:CDS |
| TTGTGTATTAAACTACAGAT+AGG | 0.474492 | 8_1:-64880297 | Msa1207420:CDS |
| ATGCTTGCTAGTGTCACAAT+GGG | 0.474989 | 8_1:+64879898 | None:intergenic |
| CTATTGCTCCTGCTTTGAGA+TGG | 0.477023 | 8_1:-64880500 | Msa1207420:CDS |
| TGCCATGATTTGCACTATCA+TGG | 0.477597 | 8_1:-64881090 | Msa1207420:CDS |
| AAAACAACAAGAGTTTGATA+AGG | 0.479736 | 8_1:-64880781 | Msa1207420:CDS |
| TAGATTCCTATCCATGGCAT+TGG | 0.480860 | 8_1:+64881320 | None:intergenic |
| CACCATGCAAAGGAAGAATT+CGG | 0.481803 | 8_1:+64879947 | None:intergenic |
| TCCCTCTGTACTATCTTCAC+TGG | 0.489314 | 8_1:-64879191 | Msa1207420:CDS |
| ATCTTGATTCAACAGAAGAA+TGG | 0.490265 | 8_1:+64879504 | None:intergenic |
| CACGTAACAGATATAACATA+AGG | 0.492851 | 8_1:+64879391 | None:intergenic |
| TGCAAGGGAACCATAGTTTG+CGG | 0.495659 | 8_1:+64881231 | None:intergenic |
| ACAGCGGAAATTGTGTGGCT+TGG | 0.498066 | 8_1:-64879742 | Msa1207420:CDS |
| AGCGTTTCGAGTTTAGGATC+AGG | 0.502068 | 8_1:-64880174 | Msa1207420:CDS |
| ATAGTTCAAGTAGCTGCTGT+TGG | 0.504833 | 8_1:-64880531 | Msa1207420:CDS |
| TGATCATGCCGGTGAGGCAT+AGG | 0.505034 | 8_1:+64881134 | None:intergenic |
| TTTCAATTTACCCTATGTGT+TGG | 0.505450 | 8_1:-64880242 | Msa1207420:CDS |
| GTGGGACTAATATTGAAGAT+TGG | 0.516737 | 8_1:-64879246 | Msa1207420:CDS |
| GGTGATGATGAAAGACAATT+GGG | 0.520329 | 8_1:-64880091 | Msa1207420:CDS |
| AGTTTGATAAGGTTACTGAT+AGG | 0.520646 | 8_1:-64880770 | Msa1207420:CDS |
| AGGAGAGGAAGAGTTGGTTG+AGG | 0.523488 | 8_1:-64880112 | Msa1207420:CDS |
| TGTGTATTAAACTACAGATA+GGG | 0.533409 | 8_1:-64880296 | Msa1207420:CDS |
| CATAGCCAAAACATTCATCA+TGG | 0.534666 | 8_1:+64881025 | None:intergenic |
| CCTAGAGTGGATTTCTGCCG+TGG | 0.535174 | 8_1:-64879265 | Msa1207420:CDS |
| GTCCTCAATTTATACTTGGA+AGG | 0.536449 | 8_1:-64880701 | Msa1207420:CDS |
| GAGATCAACGGAGAGTTTGA+CGG | 0.537395 | 8_1:+64881163 | None:intergenic |
| TTTAGGATCAGGCACAAAGC+AGG | 0.537499 | 8_1:-64880163 | Msa1207420:CDS |
| AAAGAGAGCATTTCCTAGAG+TGG | 0.537845 | 8_1:-64879278 | Msa1207420:CDS |
| TGGTCGGTTAAATTCTGCAC+TGG | 0.538042 | 8_1:-64880591 | Msa1207420:CDS |
| TTGAGACAAAAGTATTTGCA+AGG | 0.538484 | 8_1:+64881215 | None:intergenic |
| TAATTTAGTAGAATTTGTGC+AGG | 0.538913 | 8_1:+64879156 | None:intergenic |
| TCAATCTTGCAAGGATTCAA+AGG | 0.541067 | 8_1:-64879991 | Msa1207420:CDS |
| GACCGAATTCTTCCTTTGCA+TGG | 0.544863 | 8_1:-64879949 | Msa1207420:CDS |
| CTGGTGAATGTGATTACAAA+TGG | 0.547354 | 8_1:-64880572 | Msa1207420:CDS |
| GAACTGATCTCTATAGAAAG+TGG | 0.548534 | 8_1:-64879720 | Msa1207420:CDS |
| AGCCATGATAGTGCAAATCA+TGG | 0.549705 | 8_1:+64881088 | None:intergenic |
| ATCCCAAGATCCAACACATA+GGG | 0.550450 | 8_1:+64880232 | None:intergenic |
| TCAACACTCCTATGCCTCAC+CGG | 0.551904 | 8_1:-64881142 | Msa1207420:CDS |
| AAGAATATGTGCAACAGTGA+AGG | 0.562876 | 8_1:-64881371 | Msa1207420:CDS |
| GACCTTCCAAGTATAAATTG+AGG | 0.576629 | 8_1:+64880699 | None:intergenic |
| ATTTCAGCAAACCAATGCCA+TGG | 0.577285 | 8_1:-64881331 | Msa1207420:CDS |
| AATCCCAAGATCCAACACAT+AGG | 0.577754 | 8_1:+64880231 | None:intergenic |
| CGGTTTATTCTGCATCTCGA+AGG | 0.578932 | 8_1:-64880132 | Msa1207420:CDS |
| ATGGGGAATTCATTAAAGCT+CGG | 0.585709 | 8_1:-64879768 | Msa1207420:CDS |
| CCACGGCAGAAATCCACTCT+AGG | 0.586419 | 8_1:+64879265 | None:intergenic |
| GCTTTGCTAGCTGATCATGC+CGG | 0.587589 | 8_1:+64881123 | None:intergenic |
| AATGCTTGCTAGTGTCACAA+TGG | 0.588252 | 8_1:+64879897 | None:intergenic |
| GCTATGTAGATTCCTATCCA+TGG | 0.588339 | 8_1:+64881314 | None:intergenic |
| GCAACAAACCATCTCAAAGC+AGG | 0.589830 | 8_1:+64880492 | None:intergenic |
| GTTTAATGCTTAAGCAGAAG+AGG | 0.590609 | 8_1:-64879222 | Msa1207420:CDS |
| CTAGAGTGGATTTCTGCCGT+GGG | 0.592323 | 8_1:-64879264 | Msa1207420:CDS |
| GCGAGAAGAATCAAACTCAA+AGG | 0.592711 | 8_1:-64880805 | Msa1207420:CDS |
| TCCAGTGAAGATAGTACAGA+GGG | 0.597861 | 8_1:+64879190 | None:intergenic |
| GGAAACAGCGATTATGGTCA+AGG | 0.602310 | 8_1:+64881184 | None:intergenic |
| TCTCGAAGGAGAGGAAGAGT+TGG | 0.603815 | 8_1:-64880118 | Msa1207420:CDS |
| TTCTGCGTTACACCAAGAGA+AGG | 0.609942 | 8_1:+64881056 | None:intergenic |
| ATGTCTGCAGATCTCATCAA+AGG | 0.611092 | 8_1:-64881263 | Msa1207420:CDS |
| AGCAAACCAATGCCATGGAT+AGG | 0.618922 | 8_1:-64881326 | Msa1207420:CDS |
| AATCTTCAATATTAGTCCCA+CGG | 0.619042 | 8_1:+64879248 | None:intergenic |
| ACTATTCATTGGGTTCAACA+AGG | 0.621311 | 8_1:-64880063 | Msa1207420:CDS |
| CTCTGTACTATCTTCACTGG+AGG | 0.621968 | 8_1:-64879188 | Msa1207420:CDS |
| GGAAAACAGCGGAAATTGTG+TGG | 0.624134 | 8_1:-64879747 | Msa1207420:CDS |
| TATTCTGCATCTCGAAGGAG+AGG | 0.624822 | 8_1:-64880127 | Msa1207420:CDS |
| GATATAGGTGTCCAAATGTG+AGG | 0.626396 | 8_1:-64880464 | Msa1207420:CDS |
| CATAGGAGTGTTGAGATCAA+CGG | 0.634065 | 8_1:+64881151 | None:intergenic |
| GGAGGTTCTACACCATGCAA+AGG | 0.640891 | 8_1:+64879937 | None:intergenic |
| GCTAGCTGATCATGCCGGTG+AGG | 0.641170 | 8_1:+64881128 | None:intergenic |
| TGAGACAAAAGTATTTGCAA+GGG | 0.647084 | 8_1:+64881216 | None:intergenic |
| GGGAGTGACCAATTATATGG+AGG | 0.669045 | 8_1:+64879919 | None:intergenic |
| TTAAAGTAAGTCCTTCAGCA+TGG | 0.672802 | 8_1:-64879573 | Msa1207420:CDS |
| TATTAAACTACAGATAGGGA+TGG | 0.673003 | 8_1:-64880292 | Msa1207420:CDS |
| AAATAACATTGACAAAGATG+GGG | 0.675781 | 8_1:-64879785 | Msa1207420:CDS |
| CATTAAAGCTCGGAAAACAG+CGG | 0.676723 | 8_1:-64879758 | Msa1207420:CDS |
| GTATTGGACTGATAGGCTAG+TGG | 0.680875 | 8_1:-64880406 | Msa1207420:CDS |
| CTCCAGTGAAGATAGTACAG+AGG | 0.707560 | 8_1:+64879189 | None:intergenic |
| TGCTTGCTAGTGTCACAATG+GGG | 0.738579 | 8_1:+64879899 | None:intergenic |
| GCACAAAGCAGGATCTACGA+CGG | 0.742357 | 8_1:-64880152 | Msa1207420:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAACTCAATAACAAGTTT+TGG | + | chr8_1:64880482-64880501 | None:intergenic | 20.0% |
| !!! | AAAACTTGTTATTGAGTTAT+TGG | - | chr8_1:64880481-64880500 | Msa1207420:CDS | 20.0% |
| !! | AAAATAACATTGACAAAGAT+GGG | - | chr8_1:64880720-64880739 | Msa1207420:CDS | 20.0% |
| !! | CACAAATTCTACTAAATTAA+GGG | - | chr8_1:64881354-64881373 | Msa1207420:CDS | 20.0% |
| !!! | AATAACTCAATAACAAGTTT+TGG | + | chr8_1:64880482-64880501 | None:intergenic | 20.0% |
| !!! | AAAACTTGTTATTGAGTTAT+TGG | - | chr8_1:64880481-64880500 | Msa1207420:CDS | 20.0% |
| !! | AAAATAACATTGACAAAGAT+GGG | - | chr8_1:64880720-64880739 | Msa1207420:CDS | 20.0% |
| !! | CACAAATTCTACTAAATTAA+GGG | - | chr8_1:64881354-64881373 | Msa1207420:CDS | 20.0% |
| ! | ATTTGTATACAGTTTGTAAC+TGG | - | chr8_1:64879534-64879553 | Msa1207420:CDS | 25.0% |
| !!! | TGGTGTTATTATGTTTGTTA+TGG | - | chr8_1:64879584-64879603 | Msa1207420:CDS | 25.0% |
| ! | ACGAAAGATTAAACATTACA+TGG | - | chr8_1:64879647-64879666 | Msa1207420:CDS | 25.0% |
| ! | AAAACAACAAGAGTTTGATA+AGG | - | chr8_1:64879725-64879744 | Msa1207420:CDS | 25.0% |
| !! | GAGATGAATTGATGAAATTT+TGG | - | chr8_1:64879763-64879782 | Msa1207420:CDS | 25.0% |
| !! | ATTGATGAAATTTTGGATGA+TGG | - | chr8_1:64879770-64879789 | Msa1207420:CDS | 25.0% |
| !!! | AAGAAAATTTTTCAAGTGGA+AGG | - | chr8_1:64880077-64880096 | Msa1207420:CDS | 25.0% |
| !!! | AGAAAATTTTTCAAGTGGAA+GGG | - | chr8_1:64880078-64880097 | Msa1207420:CDS | 25.0% |
| ! | TTGTGTATTAAACTACAGAT+AGG | - | chr8_1:64880209-64880228 | Msa1207420:CDS | 25.0% |
| ! | TGTGTATTAAACTACAGATA+GGG | - | chr8_1:64880210-64880229 | Msa1207420:CDS | 25.0% |
| ! | AAAAAATGTTCAATCTTGCA+AGG | - | chr8_1:64880506-64880525 | Msa1207420:CDS | 25.0% |
| !! | TTTTCTATGAACTTCACATA+AGG | + | chr8_1:64880704-64880723 | None:intergenic | 25.0% |
| ! | GAAAATAACATTGACAAAGA+TGG | - | chr8_1:64880719-64880738 | Msa1207420:CDS | 25.0% |
| ! | AAATAACATTGACAAAGATG+GGG | - | chr8_1:64880721-64880740 | Msa1207420:CDS | 25.0% |
| !!! | TTTGAAGCCAATACTTTTAT+AGG | + | chr8_1:64880959-64880978 | None:intergenic | 25.0% |
| ! | GTGATAATTGCTGATATATT+GGG | - | chr8_1:64881073-64881092 | Msa1207420:CDS | 25.0% |
| ! | TAATTTAGTAGAATTTGTGC+AGG | + | chr8_1:64881353-64881372 | None:intergenic | 25.0% |
| ! | GCACAAATTCTACTAAATTA+AGG | - | chr8_1:64881353-64881372 | Msa1207420:CDS | 25.0% |
| ! | ATTTGTATACAGTTTGTAAC+TGG | - | chr8_1:64879534-64879553 | Msa1207420:CDS | 25.0% |
| !!! | TGGTGTTATTATGTTTGTTA+TGG | - | chr8_1:64879584-64879603 | Msa1207420:CDS | 25.0% |
| ! | ACGAAAGATTAAACATTACA+TGG | - | chr8_1:64879647-64879666 | Msa1207420:CDS | 25.0% |
| ! | AAAACAACAAGAGTTTGATA+AGG | - | chr8_1:64879725-64879744 | Msa1207420:CDS | 25.0% |
| !! | GAGATGAATTGATGAAATTT+TGG | - | chr8_1:64879763-64879782 | Msa1207420:CDS | 25.0% |
| !! | ATTGATGAAATTTTGGATGA+TGG | - | chr8_1:64879770-64879789 | Msa1207420:CDS | 25.0% |
| !!! | AAGAAAATTTTTCAAGTGGA+AGG | - | chr8_1:64880077-64880096 | Msa1207420:CDS | 25.0% |
| !!! | AGAAAATTTTTCAAGTGGAA+GGG | - | chr8_1:64880078-64880097 | Msa1207420:CDS | 25.0% |
| ! | TTGTGTATTAAACTACAGAT+AGG | - | chr8_1:64880209-64880228 | Msa1207420:CDS | 25.0% |
| ! | TGTGTATTAAACTACAGATA+GGG | - | chr8_1:64880210-64880229 | Msa1207420:CDS | 25.0% |
| ! | AAAAAATGTTCAATCTTGCA+AGG | - | chr8_1:64880506-64880525 | Msa1207420:CDS | 25.0% |
| !! | TTTTCTATGAACTTCACATA+AGG | + | chr8_1:64880704-64880723 | None:intergenic | 25.0% |
| ! | GAAAATAACATTGACAAAGA+TGG | - | chr8_1:64880719-64880738 | Msa1207420:CDS | 25.0% |
| ! | AAATAACATTGACAAAGATG+GGG | - | chr8_1:64880721-64880740 | Msa1207420:CDS | 25.0% |
| !!! | TTTGAAGCCAATACTTTTAT+AGG | + | chr8_1:64880959-64880978 | None:intergenic | 25.0% |
| ! | GTGATAATTGCTGATATATT+GGG | - | chr8_1:64881073-64881092 | Msa1207420:CDS | 25.0% |
| ! | TAATTTAGTAGAATTTGTGC+AGG | + | chr8_1:64881353-64881372 | None:intergenic | 25.0% |
| ! | GCACAAATTCTACTAAATTA+AGG | - | chr8_1:64881353-64881372 | Msa1207420:CDS | 25.0% |
| !! | TGAGACAAAAGTATTTGCAA+GGG | + | chr8_1:64879293-64879312 | None:intergenic | 30.0% |
| !! | TTGAGACAAAAGTATTTGCA+AGG | + | chr8_1:64879294-64879313 | None:intergenic | 30.0% |
| ! | TGAAACCATGATGAATGTTT+TGG | - | chr8_1:64879476-64879495 | Msa1207420:CDS | 30.0% |
| !!! | TATGAGTTTTGGATTGAACA+TGG | - | chr8_1:64879564-64879583 | Msa1207420:CDS | 30.0% |
| AGTTTGATAAGGTTACTGAT+AGG | - | chr8_1:64879736-64879755 | Msa1207420:CDS | 30.0% | |
| ! | TTCGATCTTATTTGATGTCT+TGG | - | chr8_1:64879895-64879914 | Msa1207420:CDS | 30.0% |
| ! | ATCTTATTTGATGTCTTGGT+CGG | - | chr8_1:64879899-64879918 | Msa1207420:CDS | 30.0% |
| !!! | CTGCAAGAAAATTTTTCAAG+TGG | - | chr8_1:64880073-64880092 | Msa1207420:CDS | 30.0% |
| TTATGGATCCGAAAACTAAT+CGG | + | chr8_1:64880140-64880159 | None:intergenic | 30.0% | |
| !! | TTAGTTTTCGGATCCATAAT+CGG | - | chr8_1:64880141-64880160 | Msa1207420:CDS | 30.0% |
| TATTAAACTACAGATAGGGA+TGG | - | chr8_1:64880214-64880233 | Msa1207420:CDS | 30.0% | |
| TTTCAATTTACCCTATGTGT+TGG | - | chr8_1:64880264-64880283 | Msa1207420:CDS | 30.0% | |
| !! | TCCAAATATTGAGAAGTGTT+TGG | - | chr8_1:64880643-64880662 | Msa1207420:CDS | 30.0% |
| ACCAAACACTTCTCAATATT+TGG | + | chr8_1:64880647-64880666 | None:intergenic | 30.0% | |
| ATCTTGATTCAACAGAAGAA+TGG | + | chr8_1:64881005-64881024 | None:intergenic | 30.0% | |
| TTGAATCAAGATGTCATAAC+AGG | - | chr8_1:64881013-64881032 | Msa1207420:CDS | 30.0% | |
| GGTGATAATTGCTGATATAT+TGG | - | chr8_1:64881072-64881091 | Msa1207420:CDS | 30.0% | |
| CACGTAACAGATATAACATA+AGG | + | chr8_1:64881118-64881137 | None:intergenic | 30.0% | |
| AATCTTCAATATTAGTCCCA+CGG | + | chr8_1:64881261-64881280 | None:intergenic | 30.0% | |
| !! | TGAGACAAAAGTATTTGCAA+GGG | + | chr8_1:64879293-64879312 | None:intergenic | 30.0% |
| !! | TTGAGACAAAAGTATTTGCA+AGG | + | chr8_1:64879294-64879313 | None:intergenic | 30.0% |
| ! | TGAAACCATGATGAATGTTT+TGG | - | chr8_1:64879476-64879495 | Msa1207420:CDS | 30.0% |
| !!! | TATGAGTTTTGGATTGAACA+TGG | - | chr8_1:64879564-64879583 | Msa1207420:CDS | 30.0% |
| AGTTTGATAAGGTTACTGAT+AGG | - | chr8_1:64879736-64879755 | Msa1207420:CDS | 30.0% | |
| ! | TTCGATCTTATTTGATGTCT+TGG | - | chr8_1:64879895-64879914 | Msa1207420:CDS | 30.0% |
| ! | ATCTTATTTGATGTCTTGGT+CGG | - | chr8_1:64879899-64879918 | Msa1207420:CDS | 30.0% |
| !!! | CTGCAAGAAAATTTTTCAAG+TGG | - | chr8_1:64880073-64880092 | Msa1207420:CDS | 30.0% |
| TTATGGATCCGAAAACTAAT+CGG | + | chr8_1:64880140-64880159 | None:intergenic | 30.0% | |
| !! | TTAGTTTTCGGATCCATAAT+CGG | - | chr8_1:64880141-64880160 | Msa1207420:CDS | 30.0% |
| TATTAAACTACAGATAGGGA+TGG | - | chr8_1:64880214-64880233 | Msa1207420:CDS | 30.0% | |
| TTTCAATTTACCCTATGTGT+TGG | - | chr8_1:64880264-64880283 | Msa1207420:CDS | 30.0% | |
| !! | TCCAAATATTGAGAAGTGTT+TGG | - | chr8_1:64880643-64880662 | Msa1207420:CDS | 30.0% |
| ACCAAACACTTCTCAATATT+TGG | + | chr8_1:64880647-64880666 | None:intergenic | 30.0% | |
| ATCTTGATTCAACAGAAGAA+TGG | + | chr8_1:64881005-64881024 | None:intergenic | 30.0% | |
| TTGAATCAAGATGTCATAAC+AGG | - | chr8_1:64881013-64881032 | Msa1207420:CDS | 30.0% | |
| GGTGATAATTGCTGATATAT+TGG | - | chr8_1:64881072-64881091 | Msa1207420:CDS | 30.0% | |
| CACGTAACAGATATAACATA+AGG | + | chr8_1:64881118-64881137 | None:intergenic | 30.0% | |
| AATCTTCAATATTAGTCCCA+CGG | + | chr8_1:64881261-64881280 | None:intergenic | 30.0% | |
| AAGAATATGTGCAACAGTGA+AGG | - | chr8_1:64879135-64879154 | Msa1207420:CDS | 35.0% | |
| CATAGCCAAAACATTCATCA+TGG | + | chr8_1:64879484-64879503 | None:intergenic | 35.0% | |
| !!! | CATGATGAATGTTTTGGCTA+TGG | - | chr8_1:64879482-64879501 | Msa1207420:CDS | 35.0% |
| !!! | CTGGTGTTATCTATGAGTTT+TGG | - | chr8_1:64879553-64879572 | Msa1207420:CDS | 35.0% |
| AGCAGTCCTCAATTTATACT+TGG | - | chr8_1:64879801-64879820 | Msa1207420:CDS | 35.0% | |
| GTCCTCAATTTATACTTGGA+AGG | - | chr8_1:64879805-64879824 | Msa1207420:CDS | 35.0% | |
| GACCTTCCAAGTATAAATTG+AGG | + | chr8_1:64879810-64879829 | None:intergenic | 35.0% | |
| CTGGTGAATGTGATTACAAA+TGG | - | chr8_1:64879934-64879953 | Msa1207420:CDS | 35.0% | |
| !! | GGTTTGTTGCTGTTAGATAT+AGG | - | chr8_1:64880027-64880046 | Msa1207420:CDS | 35.0% |
| !!! | TTTTTCAAGTGGAAGGGTAT+TGG | - | chr8_1:64880084-64880103 | Msa1207420:CDS | 35.0% |
| !!! | GAGAAAGTCCGATTAGTTTT+CGG | - | chr8_1:64880129-64880148 | Msa1207420:CDS | 35.0% |
| !! | TGGGATTTTGTGAGTTTTGT+AGG | - | chr8_1:64880291-64880310 | Msa1207420:CDS | 35.0% |
| !! | TTTGTGAGTTTTGTAGGACT+TGG | - | chr8_1:64880297-64880316 | Msa1207420:CDS | 35.0% |
| ! | TTTTGTAGGACTTGGAAACT+CGG | - | chr8_1:64880305-64880324 | Msa1207420:CDS | 35.0% |
| ! | AGGTGATGATGAAAGACAAT+TGG | - | chr8_1:64880414-64880433 | Msa1207420:CDS | 35.0% |
| ! | GGTGATGATGAAAGACAATT+GGG | - | chr8_1:64880415-64880434 | Msa1207420:CDS | 35.0% |
| ATTGGGATGCAACTATTCAT+TGG | - | chr8_1:64880432-64880451 | Msa1207420:CDS | 35.0% | |
| TTGGGATGCAACTATTCATT+GGG | - | chr8_1:64880433-64880452 | Msa1207420:CDS | 35.0% | |
| ACTATTCATTGGGTTCAACA+AGG | - | chr8_1:64880443-64880462 | Msa1207420:CDS | 35.0% | |
| TCAATCTTGCAAGGATTCAA+AGG | - | chr8_1:64880515-64880534 | Msa1207420:CDS | 35.0% | |
| GTGTAGAACCTCCATATAAT+TGG | - | chr8_1:64880579-64880598 | Msa1207420:CDS | 35.0% | |
| ATGGGGAATTCATTAAAGCT+CGG | - | chr8_1:64880738-64880757 | Msa1207420:CDS | 35.0% | |
| GAACTGATCTCTATAGAAAG+TGG | - | chr8_1:64880786-64880805 | Msa1207420:CDS | 35.0% | |
| !! | TGTTTTTGCAAACTCAGCTA+GGG | + | chr8_1:64880873-64880892 | None:intergenic | 35.0% |
| !!! | TTGTTTTTGCAAACTCAGCT+AGG | + | chr8_1:64880874-64880893 | None:intergenic | 35.0% |
| TAGCTGAGTTTGCAAAAACA+AGG | - | chr8_1:64880873-64880892 | Msa1207420:CDS | 35.0% | |
| TTAAAGTAAGTCCTTCAGCA+TGG | - | chr8_1:64880933-64880952 | Msa1207420:CDS | 35.0% | |
| ! | AGCATGGCCTATAAAAGTAT+TGG | - | chr8_1:64880949-64880968 | Msa1207420:CDS | 35.0% |
| AAAGTCTCTCACTAGTGATA+TGG | + | chr8_1:64881039-64881058 | None:intergenic | 35.0% | |
| !!! | GAGACTTTTTGAAGCAGTAA+CGG | - | chr8_1:64881051-64881070 | Msa1207420:CDS | 35.0% |
| TCTGTTACGTGTTTGAATAC+TGG | - | chr8_1:64881127-64881146 | Msa1207420:CDS | 35.0% | |
| AGACAAGCAGTTTATGTTCT+TGG | - | chr8_1:64881175-64881194 | Msa1207420:CDS | 35.0% | |
| GTGGGACTAATATTGAAGAT+TGG | - | chr8_1:64881260-64881279 | Msa1207420:CDS | 35.0% | |
| GTTTAATGCTTAAGCAGAAG+AGG | - | chr8_1:64881284-64881303 | Msa1207420:CDS | 35.0% | |
| AAGAATATGTGCAACAGTGA+AGG | - | chr8_1:64879135-64879154 | Msa1207420:CDS | 35.0% | |
| CATAGCCAAAACATTCATCA+TGG | + | chr8_1:64879484-64879503 | None:intergenic | 35.0% | |
| !!! | CATGATGAATGTTTTGGCTA+TGG | - | chr8_1:64879482-64879501 | Msa1207420:CDS | 35.0% |
| !!! | CTGGTGTTATCTATGAGTTT+TGG | - | chr8_1:64879553-64879572 | Msa1207420:CDS | 35.0% |
| AGCAGTCCTCAATTTATACT+TGG | - | chr8_1:64879801-64879820 | Msa1207420:CDS | 35.0% | |
| GTCCTCAATTTATACTTGGA+AGG | - | chr8_1:64879805-64879824 | Msa1207420:CDS | 35.0% | |
| GACCTTCCAAGTATAAATTG+AGG | + | chr8_1:64879810-64879829 | None:intergenic | 35.0% | |
| CTGGTGAATGTGATTACAAA+TGG | - | chr8_1:64879934-64879953 | Msa1207420:CDS | 35.0% | |
| !! | GGTTTGTTGCTGTTAGATAT+AGG | - | chr8_1:64880027-64880046 | Msa1207420:CDS | 35.0% |
| !!! | TTTTTCAAGTGGAAGGGTAT+TGG | - | chr8_1:64880084-64880103 | Msa1207420:CDS | 35.0% |
| !!! | GAGAAAGTCCGATTAGTTTT+CGG | - | chr8_1:64880129-64880148 | Msa1207420:CDS | 35.0% |
| !! | TGGGATTTTGTGAGTTTTGT+AGG | - | chr8_1:64880291-64880310 | Msa1207420:CDS | 35.0% |
| !! | TTTGTGAGTTTTGTAGGACT+TGG | - | chr8_1:64880297-64880316 | Msa1207420:CDS | 35.0% |
| ! | TTTTGTAGGACTTGGAAACT+CGG | - | chr8_1:64880305-64880324 | Msa1207420:CDS | 35.0% |
| ! | AGGTGATGATGAAAGACAAT+TGG | - | chr8_1:64880414-64880433 | Msa1207420:CDS | 35.0% |
| ! | GGTGATGATGAAAGACAATT+GGG | - | chr8_1:64880415-64880434 | Msa1207420:CDS | 35.0% |
| ATTGGGATGCAACTATTCAT+TGG | - | chr8_1:64880432-64880451 | Msa1207420:CDS | 35.0% | |
| TTGGGATGCAACTATTCATT+GGG | - | chr8_1:64880433-64880452 | Msa1207420:CDS | 35.0% | |
| ACTATTCATTGGGTTCAACA+AGG | - | chr8_1:64880443-64880462 | Msa1207420:CDS | 35.0% | |
| TCAATCTTGCAAGGATTCAA+AGG | - | chr8_1:64880515-64880534 | Msa1207420:CDS | 35.0% | |
| GTGTAGAACCTCCATATAAT+TGG | - | chr8_1:64880579-64880598 | Msa1207420:CDS | 35.0% | |
| ATGGGGAATTCATTAAAGCT+CGG | - | chr8_1:64880738-64880757 | Msa1207420:CDS | 35.0% | |
| GAACTGATCTCTATAGAAAG+TGG | - | chr8_1:64880786-64880805 | Msa1207420:CDS | 35.0% | |
| !! | TGTTTTTGCAAACTCAGCTA+GGG | + | chr8_1:64880873-64880892 | None:intergenic | 35.0% |
| !!! | TTGTTTTTGCAAACTCAGCT+AGG | + | chr8_1:64880874-64880893 | None:intergenic | 35.0% |
| TAGCTGAGTTTGCAAAAACA+AGG | - | chr8_1:64880873-64880892 | Msa1207420:CDS | 35.0% | |
| TTAAAGTAAGTCCTTCAGCA+TGG | - | chr8_1:64880933-64880952 | Msa1207420:CDS | 35.0% | |
| ! | AGCATGGCCTATAAAAGTAT+TGG | - | chr8_1:64880949-64880968 | Msa1207420:CDS | 35.0% |
| AAAGTCTCTCACTAGTGATA+TGG | + | chr8_1:64881039-64881058 | None:intergenic | 35.0% | |
| !!! | GAGACTTTTTGAAGCAGTAA+CGG | - | chr8_1:64881051-64881070 | Msa1207420:CDS | 35.0% |
| TCTGTTACGTGTTTGAATAC+TGG | - | chr8_1:64881127-64881146 | Msa1207420:CDS | 35.0% | |
| AGACAAGCAGTTTATGTTCT+TGG | - | chr8_1:64881175-64881194 | Msa1207420:CDS | 35.0% | |
| GTGGGACTAATATTGAAGAT+TGG | - | chr8_1:64881260-64881279 | Msa1207420:CDS | 35.0% | |
| GTTTAATGCTTAAGCAGAAG+AGG | - | chr8_1:64881284-64881303 | Msa1207420:CDS | 35.0% | |
| ATTTCAGCAAACCAATGCCA+TGG | - | chr8_1:64879175-64879194 | Msa1207420:CDS | 40.0% | |
| TAGATTCCTATCCATGGCAT+TGG | + | chr8_1:64879189-64879208 | None:intergenic | 40.0% | |
| GCTATGTAGATTCCTATCCA+TGG | + | chr8_1:64879195-64879214 | None:intergenic | 40.0% | |
| ATGTCTGCAGATCTCATCAA+AGG | - | chr8_1:64879243-64879262 | Msa1207420:CDS | 40.0% | |
| TTTGACGGAAACAGCGATTA+TGG | + | chr8_1:64879331-64879350 | None:intergenic | 40.0% | |
| !! | CATAGGAGTGTTGAGATCAA+CGG | + | chr8_1:64879358-64879377 | None:intergenic | 40.0% |
| ! | TGCCATGATTTGCACTATCA+TGG | - | chr8_1:64879416-64879435 | Msa1207420:CDS | 40.0% |
| ! | AGCCATGATAGTGCAAATCA+TGG | + | chr8_1:64879421-64879440 | None:intergenic | 40.0% |
| GCTAATTCTATGCCTTCTCT+TGG | - | chr8_1:64879438-64879457 | Msa1207420:CDS | 40.0% | |
| GCGAGAAGAATCAAACTCAA+AGG | - | chr8_1:64879701-64879720 | Msa1207420:CDS | 40.0% | |
| TCAGTTTCATGTACTGCTTC+TGG | - | chr8_1:64879828-64879847 | Msa1207420:CDS | 40.0% | |
| ATAGTTCAAGTAGCTGCTGT+TGG | - | chr8_1:64879975-64879994 | Msa1207420:CDS | 40.0% | |
| GATATAGGTGTCCAAATGTG+AGG | - | chr8_1:64880042-64880061 | Msa1207420:CDS | 40.0% | |
| ! | ACTTCCTAAACCACCGATTA+TGG | + | chr8_1:64880157-64880176 | None:intergenic | 40.0% |
| TAATCGGTGGTTTAGGAAGT+TGG | - | chr8_1:64880157-64880176 | Msa1207420:CDS | 40.0% | |
| TTACCCTATGTGTTGGATCT+TGG | - | chr8_1:64880271-64880290 | Msa1207420:CDS | 40.0% | |
| TACCCTATGTGTTGGATCTT+GGG | - | chr8_1:64880272-64880291 | Msa1207420:CDS | 40.0% | |
| ATCCCAAGATCCAACACATA+GGG | + | chr8_1:64880277-64880296 | None:intergenic | 40.0% | |
| AATCCCAAGATCCAACACAT+AGG | + | chr8_1:64880278-64880297 | None:intergenic | 40.0% | |
| TTGCAAGGATTCAAAGGAGT+TGG | - | chr8_1:64880521-64880540 | Msa1207420:CDS | 40.0% | |
| CACCATGCAAAGGAAGAATT+CGG | + | chr8_1:64880562-64880581 | None:intergenic | 40.0% | |
| ATGGGGAGTGACCAATTATA+TGG | + | chr8_1:64880593-64880612 | None:intergenic | 40.0% | |
| ! | ATGCTTGCTAGTGTCACAAT+GGG | + | chr8_1:64880611-64880630 | None:intergenic | 40.0% |
| ! | AATGCTTGCTAGTGTCACAA+TGG | + | chr8_1:64880612-64880631 | None:intergenic | 40.0% |
| CATTAAAGCTCGGAAAACAG+CGG | - | chr8_1:64880748-64880767 | Msa1207420:CDS | 40.0% | |
| ! | ACTTTTATAGGCCATGCTGA+AGG | + | chr8_1:64880947-64880966 | None:intergenic | 40.0% |
| !! | AAAGAGAGCATTTCCTAGAG+TGG | - | chr8_1:64881228-64881247 | Msa1207420:CDS | 40.0% |
| TCCAGTGAAGATAGTACAGA+GGG | + | chr8_1:64881319-64881338 | None:intergenic | 40.0% | |
| ATTTCAGCAAACCAATGCCA+TGG | - | chr8_1:64879175-64879194 | Msa1207420:CDS | 40.0% | |
| TAGATTCCTATCCATGGCAT+TGG | + | chr8_1:64879189-64879208 | None:intergenic | 40.0% | |
| GCTATGTAGATTCCTATCCA+TGG | + | chr8_1:64879195-64879214 | None:intergenic | 40.0% | |
| ATGTCTGCAGATCTCATCAA+AGG | - | chr8_1:64879243-64879262 | Msa1207420:CDS | 40.0% | |
| TTTGACGGAAACAGCGATTA+TGG | + | chr8_1:64879331-64879350 | None:intergenic | 40.0% | |
| !! | CATAGGAGTGTTGAGATCAA+CGG | + | chr8_1:64879358-64879377 | None:intergenic | 40.0% |
| ! | TGCCATGATTTGCACTATCA+TGG | - | chr8_1:64879416-64879435 | Msa1207420:CDS | 40.0% |
| ! | AGCCATGATAGTGCAAATCA+TGG | + | chr8_1:64879421-64879440 | None:intergenic | 40.0% |
| GCTAATTCTATGCCTTCTCT+TGG | - | chr8_1:64879438-64879457 | Msa1207420:CDS | 40.0% | |
| GCGAGAAGAATCAAACTCAA+AGG | - | chr8_1:64879701-64879720 | Msa1207420:CDS | 40.0% | |
| TCAGTTTCATGTACTGCTTC+TGG | - | chr8_1:64879828-64879847 | Msa1207420:CDS | 40.0% | |
| ATAGTTCAAGTAGCTGCTGT+TGG | - | chr8_1:64879975-64879994 | Msa1207420:CDS | 40.0% | |
| GATATAGGTGTCCAAATGTG+AGG | - | chr8_1:64880042-64880061 | Msa1207420:CDS | 40.0% | |
| ! | ACTTCCTAAACCACCGATTA+TGG | + | chr8_1:64880157-64880176 | None:intergenic | 40.0% |
| TAATCGGTGGTTTAGGAAGT+TGG | - | chr8_1:64880157-64880176 | Msa1207420:CDS | 40.0% | |
| TTACCCTATGTGTTGGATCT+TGG | - | chr8_1:64880271-64880290 | Msa1207420:CDS | 40.0% | |
| TACCCTATGTGTTGGATCTT+GGG | - | chr8_1:64880272-64880291 | Msa1207420:CDS | 40.0% | |
| ATCCCAAGATCCAACACATA+GGG | + | chr8_1:64880277-64880296 | None:intergenic | 40.0% | |
| AATCCCAAGATCCAACACAT+AGG | + | chr8_1:64880278-64880297 | None:intergenic | 40.0% | |
| TTGCAAGGATTCAAAGGAGT+TGG | - | chr8_1:64880521-64880540 | Msa1207420:CDS | 40.0% | |
| CACCATGCAAAGGAAGAATT+CGG | + | chr8_1:64880562-64880581 | None:intergenic | 40.0% | |
| ATGGGGAGTGACCAATTATA+TGG | + | chr8_1:64880593-64880612 | None:intergenic | 40.0% | |
| ! | ATGCTTGCTAGTGTCACAAT+GGG | + | chr8_1:64880611-64880630 | None:intergenic | 40.0% |
| ! | AATGCTTGCTAGTGTCACAA+TGG | + | chr8_1:64880612-64880631 | None:intergenic | 40.0% |
| CATTAAAGCTCGGAAAACAG+CGG | - | chr8_1:64880748-64880767 | Msa1207420:CDS | 40.0% | |
| ! | ACTTTTATAGGCCATGCTGA+AGG | + | chr8_1:64880947-64880966 | None:intergenic | 40.0% |
| !! | AAAGAGAGCATTTCCTAGAG+TGG | - | chr8_1:64881228-64881247 | Msa1207420:CDS | 40.0% |
| TCCAGTGAAGATAGTACAGA+GGG | + | chr8_1:64881319-64881338 | None:intergenic | 40.0% | |
| AGCAAACCAATGCCATGGAT+AGG | - | chr8_1:64879180-64879199 | Msa1207420:CDS | 45.0% | |
| GCATCAAAACCCGCAAACTA+TGG | - | chr8_1:64879265-64879284 | Msa1207420:CDS | 45.0% | |
| TGCAAGGGAACCATAGTTTG+CGG | + | chr8_1:64879278-64879297 | None:intergenic | 45.0% | |
| GGAAACAGCGATTATGGTCA+AGG | + | chr8_1:64879325-64879344 | None:intergenic | 45.0% | |
| GAGATCAACGGAGAGTTTGA+CGG | + | chr8_1:64879346-64879365 | None:intergenic | 45.0% | |
| TTCTGCGTTACACCAAGAGA+AGG | + | chr8_1:64879453-64879472 | None:intergenic | 45.0% | |
| TGGTCGGTTAAATTCTGCAC+TGG | - | chr8_1:64879915-64879934 | Msa1207420:CDS | 45.0% | |
| ! | AAGTAGCTGCTGTTGGTGTT+GGG | - | chr8_1:64879982-64880001 | Msa1207420:CDS | 45.0% |
| !! | CTATTGCTCCTGCTTTGAGA+TGG | - | chr8_1:64880006-64880025 | Msa1207420:CDS | 45.0% |
| GCAACAAACCATCTCAAAGC+AGG | + | chr8_1:64880017-64880036 | None:intergenic | 45.0% | |
| GGTGTCCAAATGTGAGGAAA+AGG | - | chr8_1:64880048-64880067 | Msa1207420:CDS | 45.0% | |
| ! | CAGCTCCTTTTCCTCACATT+TGG | + | chr8_1:64880056-64880075 | None:intergenic | 45.0% |
| !! | TGGAAGGGTATTGGACTGAT+AGG | - | chr8_1:64880093-64880112 | Msa1207420:CDS | 45.0% |
| GTATTGGACTGATAGGCTAG+TGG | - | chr8_1:64880100-64880119 | Msa1207420:CDS | 45.0% | |
| ! | GTTTTCGGATCCATAATCGG+TGG | - | chr8_1:64880144-64880163 | Msa1207420:CDS | 45.0% |
| GGATCCATAATCGGTGGTTT+AGG | - | chr8_1:64880150-64880169 | Msa1207420:CDS | 45.0% | |
| !! | GGTTCTAGCGTTTCGAGTTT+AGG | - | chr8_1:64880326-64880345 | Msa1207420:CDS | 45.0% |
| !! | AGCGTTTCGAGTTTAGGATC+AGG | - | chr8_1:64880332-64880351 | Msa1207420:CDS | 45.0% |
| ! | TTTAGGATCAGGCACAAAGC+AGG | - | chr8_1:64880343-64880362 | Msa1207420:CDS | 45.0% |
| CGGTTTATTCTGCATCTCGA+AGG | - | chr8_1:64880374-64880393 | Msa1207420:CDS | 45.0% | |
| TATTCTGCATCTCGAAGGAG+AGG | - | chr8_1:64880379-64880398 | Msa1207420:CDS | 45.0% | |
| GACCGAATTCTTCCTTTGCA+TGG | - | chr8_1:64880557-64880576 | Msa1207420:CDS | 45.0% | |
| GGGAGTGACCAATTATATGG+AGG | + | chr8_1:64880590-64880609 | None:intergenic | 45.0% | |
| ! | TGCTTGCTAGTGTCACAATG+GGG | + | chr8_1:64880610-64880629 | None:intergenic | 45.0% |
| GGAAAACAGCGGAAATTGTG+TGG | - | chr8_1:64880759-64880778 | Msa1207420:CDS | 45.0% | |
| TCCCTCTGTACTATCTTCAC+TGG | - | chr8_1:64881315-64881334 | Msa1207420:CDS | 45.0% | |
| CTCCAGTGAAGATAGTACAG+AGG | + | chr8_1:64881320-64881339 | None:intergenic | 45.0% | |
| CTCTGTACTATCTTCACTGG+AGG | - | chr8_1:64881318-64881337 | Msa1207420:CDS | 45.0% | |
| AGCAAACCAATGCCATGGAT+AGG | - | chr8_1:64879180-64879199 | Msa1207420:CDS | 45.0% | |
| GCATCAAAACCCGCAAACTA+TGG | - | chr8_1:64879265-64879284 | Msa1207420:CDS | 45.0% | |
| TGCAAGGGAACCATAGTTTG+CGG | + | chr8_1:64879278-64879297 | None:intergenic | 45.0% | |
| GGAAACAGCGATTATGGTCA+AGG | + | chr8_1:64879325-64879344 | None:intergenic | 45.0% | |
| GAGATCAACGGAGAGTTTGA+CGG | + | chr8_1:64879346-64879365 | None:intergenic | 45.0% | |
| TTCTGCGTTACACCAAGAGA+AGG | + | chr8_1:64879453-64879472 | None:intergenic | 45.0% | |
| TGGTCGGTTAAATTCTGCAC+TGG | - | chr8_1:64879915-64879934 | Msa1207420:CDS | 45.0% | |
| ! | AAGTAGCTGCTGTTGGTGTT+GGG | - | chr8_1:64879982-64880001 | Msa1207420:CDS | 45.0% |
| !! | CTATTGCTCCTGCTTTGAGA+TGG | - | chr8_1:64880006-64880025 | Msa1207420:CDS | 45.0% |
| GCAACAAACCATCTCAAAGC+AGG | + | chr8_1:64880017-64880036 | None:intergenic | 45.0% | |
| GGTGTCCAAATGTGAGGAAA+AGG | - | chr8_1:64880048-64880067 | Msa1207420:CDS | 45.0% | |
| ! | CAGCTCCTTTTCCTCACATT+TGG | + | chr8_1:64880056-64880075 | None:intergenic | 45.0% |
| !! | TGGAAGGGTATTGGACTGAT+AGG | - | chr8_1:64880093-64880112 | Msa1207420:CDS | 45.0% |
| GTATTGGACTGATAGGCTAG+TGG | - | chr8_1:64880100-64880119 | Msa1207420:CDS | 45.0% | |
| ! | GTTTTCGGATCCATAATCGG+TGG | - | chr8_1:64880144-64880163 | Msa1207420:CDS | 45.0% |
| GGATCCATAATCGGTGGTTT+AGG | - | chr8_1:64880150-64880169 | Msa1207420:CDS | 45.0% | |
| !! | GGTTCTAGCGTTTCGAGTTT+AGG | - | chr8_1:64880326-64880345 | Msa1207420:CDS | 45.0% |
| !! | AGCGTTTCGAGTTTAGGATC+AGG | - | chr8_1:64880332-64880351 | Msa1207420:CDS | 45.0% |
| ! | TTTAGGATCAGGCACAAAGC+AGG | - | chr8_1:64880343-64880362 | Msa1207420:CDS | 45.0% |
| CGGTTTATTCTGCATCTCGA+AGG | - | chr8_1:64880374-64880393 | Msa1207420:CDS | 45.0% | |
| TATTCTGCATCTCGAAGGAG+AGG | - | chr8_1:64880379-64880398 | Msa1207420:CDS | 45.0% | |
| GACCGAATTCTTCCTTTGCA+TGG | - | chr8_1:64880557-64880576 | Msa1207420:CDS | 45.0% | |
| GGGAGTGACCAATTATATGG+AGG | + | chr8_1:64880590-64880609 | None:intergenic | 45.0% | |
| ! | TGCTTGCTAGTGTCACAATG+GGG | + | chr8_1:64880610-64880629 | None:intergenic | 45.0% |
| GGAAAACAGCGGAAATTGTG+TGG | - | chr8_1:64880759-64880778 | Msa1207420:CDS | 45.0% | |
| TCCCTCTGTACTATCTTCAC+TGG | - | chr8_1:64881315-64881334 | Msa1207420:CDS | 45.0% | |
| CTCCAGTGAAGATAGTACAG+AGG | + | chr8_1:64881320-64881339 | None:intergenic | 45.0% | |
| CTCTGTACTATCTTCACTGG+AGG | - | chr8_1:64881318-64881337 | Msa1207420:CDS | 45.0% | |
| ! | GCAAGGGAACCATAGTTTGC+GGG | + | chr8_1:64879277-64879296 | None:intergenic | 50.0% |
| TCAACACTCCTATGCCTCAC+CGG | - | chr8_1:64879364-64879383 | Msa1207420:CDS | 50.0% | |
| GCTTTGCTAGCTGATCATGC+CGG | + | chr8_1:64879386-64879405 | None:intergenic | 50.0% | |
| CAAGTAGCTGCTGTTGGTGT+TGG | - | chr8_1:64879981-64880000 | Msa1207420:CDS | 50.0% | |
| GCACAAAGCAGGATCTACGA+CGG | - | chr8_1:64880354-64880373 | Msa1207420:CDS | 50.0% | |
| TCTCGAAGGAGAGGAAGAGT+TGG | - | chr8_1:64880388-64880407 | Msa1207420:CDS | 50.0% | |
| ! | AGGAGAGGAAGAGTTGGTTG+AGG | - | chr8_1:64880394-64880413 | Msa1207420:CDS | 50.0% |
| GGAGGTTCTACACCATGCAA+AGG | + | chr8_1:64880572-64880591 | None:intergenic | 50.0% | |
| ACAGCGGAAATTGTGTGGCT+TGG | - | chr8_1:64880764-64880783 | Msa1207420:CDS | 50.0% | |
| ! | CTAGAGTGGATTTCTGCCGT+GGG | - | chr8_1:64881242-64881261 | Msa1207420:CDS | 50.0% |
| ! | GCAAGGGAACCATAGTTTGC+GGG | + | chr8_1:64879277-64879296 | None:intergenic | 50.0% |
| TCAACACTCCTATGCCTCAC+CGG | - | chr8_1:64879364-64879383 | Msa1207420:CDS | 50.0% | |
| GCTTTGCTAGCTGATCATGC+CGG | + | chr8_1:64879386-64879405 | None:intergenic | 50.0% | |
| CAAGTAGCTGCTGTTGGTGT+TGG | - | chr8_1:64879981-64880000 | Msa1207420:CDS | 50.0% | |
| GCACAAAGCAGGATCTACGA+CGG | - | chr8_1:64880354-64880373 | Msa1207420:CDS | 50.0% | |
| TCTCGAAGGAGAGGAAGAGT+TGG | - | chr8_1:64880388-64880407 | Msa1207420:CDS | 50.0% | |
| ! | AGGAGAGGAAGAGTTGGTTG+AGG | - | chr8_1:64880394-64880413 | Msa1207420:CDS | 50.0% |
| GGAGGTTCTACACCATGCAA+AGG | + | chr8_1:64880572-64880591 | None:intergenic | 50.0% | |
| ACAGCGGAAATTGTGTGGCT+TGG | - | chr8_1:64880764-64880783 | Msa1207420:CDS | 50.0% | |
| ! | CTAGAGTGGATTTCTGCCGT+GGG | - | chr8_1:64881242-64881261 | Msa1207420:CDS | 50.0% |
| TGATCATGCCGGTGAGGCAT+AGG | + | chr8_1:64879375-64879394 | None:intergenic | 55.0% | |
| CCACGGCAGAAATCCACTCT+AGG | + | chr8_1:64881244-64881263 | None:intergenic | 55.0% | |
| ! | CCTAGAGTGGATTTCTGCCG+TGG | - | chr8_1:64881241-64881260 | Msa1207420:CDS | 55.0% |
| TGATCATGCCGGTGAGGCAT+AGG | + | chr8_1:64879375-64879394 | None:intergenic | 55.0% | |
| CCACGGCAGAAATCCACTCT+AGG | + | chr8_1:64881244-64881263 | None:intergenic | 55.0% | |
| ! | CCTAGAGTGGATTTCTGCCG+TGG | - | chr8_1:64881241-64881260 | Msa1207420:CDS | 55.0% |
| GCTAGCTGATCATGCCGGTG+AGG | + | chr8_1:64879381-64879400 | None:intergenic | 60.0% | |
| GCTAGCTGATCATGCCGGTG+AGG | + | chr8_1:64879381-64879400 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 64879129 | 64881399 | 64879129 | ID=Msa1207420;Name=Msa1207420 |
| chr8_1 | mRNA | 64879129 | 64881399 | 64879129 | ID=Msa1207420-mRNA-1;Parent=Msa1207420;Name=Msa1207420-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|-1|0|1|-1|1|1|0|756 |
| chr8_1 | exon | 64879129 | 64881399 | 64879129 | ID=Msa1207420-mRNA-1:exon:21287;Parent=Msa1207420-mRNA-1 |
| chr8_1 | CDS | 64879129 | 64881399 | 64879129 | ID=Msa1207420-mRNA-1:cds;Parent=Msa1207420-mRNA-1 |
| Gene Sequence |
| Protein sequence |
