Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1005410 | XP_024627279.2 | 80.818 | 391 | 46 | 6 | 10 | 378 | 2 | 385 | 0.0 | 600 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1005410 | A0A396GSG1 | 80.818 | 391 | 46 | 6 | 10 | 378 | 2 | 385 | 0.0 | 600 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005350 | Msa1005410 | 0.803737 | 3.022569e-49 | -8.615850e-47 |
| Msa0029850 | Msa1005410 | 0.842850 | 2.009977e-58 | -8.615850e-47 |
| Msa0043730 | Msa1005410 | 0.833253 | 5.930620e-56 | -8.615850e-47 |
| Msa0048000 | Msa1005410 | 0.860824 | 1.577928e-63 | -8.615850e-47 |
| Msa0050730 | Msa1005410 | 0.824561 | 7.550208e-54 | -8.615850e-47 |
| Msa0050760 | Msa1005410 | 0.832832 | 7.545612e-56 | -8.615850e-47 |
| Msa0053900 | Msa1005410 | 0.806153 | 9.446138e-50 | -8.615850e-47 |
| Msa0057520 | Msa1005410 | 0.814580 | 1.432901e-51 | -8.615850e-47 |
| Msa0071550 | Msa1005410 | 0.806394 | 8.404422e-50 | -8.615850e-47 |
| Msa0077180 | Msa1005410 | 0.818138 | 2.291718e-52 | -8.615850e-47 |
| Msa0084430 | Msa1005410 | 0.806328 | 8.675855e-50 | -8.615850e-47 |
| Msa0085720 | Msa1005410 | 0.808514 | 2.984010e-50 | -8.615850e-47 |
| Msa0090100 | Msa1005410 | 0.821646 | 3.615068e-53 | -8.615850e-47 |
| Msa0092990 | Msa1005410 | 0.818192 | 2.227971e-52 | -8.615850e-47 |
| Msa0099730 | Msa1005410 | 0.805296 | 1.429826e-49 | -8.615850e-47 |
| Msa0102120 | Msa1005410 | 0.814636 | 1.392495e-51 | -8.615850e-47 |
| Msa0120340 | Msa1005410 | 0.827343 | 1.648363e-54 | -8.615850e-47 |
| Msa0607540 | Msa1005410 | 0.827112 | 1.873146e-54 | -8.615850e-47 |
| Msa0610590 | Msa1005410 | 0.811330 | 7.390893e-51 | -8.615850e-47 |
| Msa0613460 | Msa1005410 | 0.807487 | 4.934994e-50 | -8.615850e-47 |
| Msa0626220 | Msa1005410 | 0.800143 | 1.654545e-48 | -8.615850e-47 |
| Msa0628740 | Msa1005410 | 0.808843 | 2.537385e-50 | -8.615850e-47 |
| Msa0647830 | Msa1005410 | 0.838660 | 2.520344e-57 | -8.615850e-47 |
| Msa0651190 | Msa1005410 | 0.817632 | 2.981962e-52 | -8.615850e-47 |
| Msa0651270 | Msa1005410 | 0.813618 | 2.336852e-51 | -8.615850e-47 |
| Msa0654010 | Msa1005410 | 0.825897 | 3.647577e-54 | -8.615850e-47 |
| Msa0658570 | Msa1005410 | 0.817963 | 2.510367e-52 | -8.615850e-47 |
| Msa0662650 | Msa1005410 | 0.829496 | 4.983270e-55 | -8.615850e-47 |
| Msa0666140 | Msa1005410 | 0.803989 | 2.678842e-49 | -8.615850e-47 |
| Msa0670660 | Msa1005410 | 0.808497 | 3.008496e-50 | -8.615850e-47 |
| Msa0679550 | Msa1005410 | 0.802857 | 4.597737e-49 | -8.615850e-47 |
| Msa0688070 | Msa1005410 | 0.800608 | 1.330811e-48 | -8.615850e-47 |
| Msa0688670 | Msa1005410 | 0.805141 | 1.540749e-49 | -8.615850e-47 |
| Msa0690440 | Msa1005410 | 0.819486 | 1.132574e-52 | -8.615850e-47 |
| Msa0693380 | Msa1005410 | 0.840542 | 8.167324e-58 | -8.615850e-47 |
| Msa0694250 | Msa1005410 | 0.819689 | 1.018048e-52 | -8.615850e-47 |
| Msa0708860 | Msa1005410 | 0.828453 | 8.914688e-55 | -8.615850e-47 |
| Msa0715110 | Msa1005410 | 0.820526 | 6.546731e-53 | -8.615850e-47 |
| Msa0718470 | Msa1005410 | 0.801958 | 7.043523e-49 | -8.615850e-47 |
| Msa0724560 | Msa1005410 | 0.855317 | 6.840264e-62 | -8.615850e-47 |
| Msa0731180 | Msa1005410 | 0.818856 | 1.575937e-52 | -8.615850e-47 |
| Msa0735160 | Msa1005410 | 0.812449 | 4.215315e-51 | -8.615850e-47 |
| Msa0738940 | Msa1005410 | 0.816515 | 5.315272e-52 | -8.615850e-47 |
| Msa0744170 | Msa1005410 | -0.819988 | 8.695293e-53 | -8.615850e-47 |
| Msa0749930 | Msa1005410 | 0.806929 | 6.477523e-50 | -8.615850e-47 |
| Msa0757050 | Msa1005410 | 0.834506 | 2.881575e-56 | -8.615850e-47 |
| Msa0757080 | Msa1005410 | 0.826790 | 2.235520e-54 | -8.615850e-47 |
| Msa0788070 | Msa1005410 | -0.803131 | 4.036394e-49 | -8.615850e-47 |
| Msa0794320 | Msa1005410 | 0.816871 | 4.423089e-52 | -8.615850e-47 |
| Msa0798030 | Msa1005410 | 0.835636 | 1.495336e-56 | -8.615850e-47 |
| Msa0830420 | Msa1005410 | 0.811800 | 5.839976e-51 | -8.615850e-47 |
| Msa0122590 | Msa1005410 | 0.805814 | 1.113224e-49 | -8.615850e-47 |
| Msa0125050 | Msa1005410 | 0.819192 | 1.321289e-52 | -8.615850e-47 |
| Msa0137570 | Msa1005410 | 0.837179 | 6.056324e-57 | -8.615850e-47 |
| Msa0140860 | Msa1005410 | 0.811951 | 5.414247e-51 | -8.615850e-47 |
| Msa0148360 | Msa1005410 | 0.807508 | 4.885781e-50 | -8.615850e-47 |
| Msa0163780 | Msa1005410 | 0.806351 | 8.580931e-50 | -8.615850e-47 |
| Msa0169820 | Msa1005410 | 0.852688 | 3.918412e-61 | -8.615850e-47 |
| Msa0170140 | Msa1005410 | 0.806029 | 1.003291e-49 | -8.615850e-47 |
| Msa0178860 | Msa1005410 | -0.820597 | 6.307316e-53 | -8.615850e-47 |
| Msa0182570 | Msa1005410 | 0.828405 | 9.154984e-55 | -8.615850e-47 |
| Msa0199800 | Msa1005410 | -0.828972 | 6.677811e-55 | -8.615850e-47 |
| Msa0217400 | Msa1005410 | 0.808863 | 2.513172e-50 | -8.615850e-47 |
| Msa0219070 | Msa1005410 | 0.801797 | 7.598418e-49 | -8.615850e-47 |
| Msa0223380 | Msa1005410 | 0.803744 | 3.012190e-49 | -8.615850e-47 |
| Msa0223410 | Msa1005410 | -0.806117 | 9.613358e-50 | -8.615850e-47 |
| Msa0226890 | Msa1005410 | 0.800095 | 1.692340e-48 | -8.615850e-47 |
| Msa0233610 | Msa1005410 | 0.823180 | 1.591453e-53 | -8.615850e-47 |
| Msa0365490 | Msa1005410 | 0.829208 | 5.852330e-55 | -8.615850e-47 |
| Msa0376590 | Msa1005410 | 0.837961 | 3.815911e-57 | -8.615850e-47 |
| Msa0377530 | Msa1005410 | 0.822294 | 2.557840e-53 | -8.615850e-47 |
| Msa0379640 | Msa1005410 | 0.826701 | 2.347648e-54 | -8.615850e-47 |
| Msa0381600 | Msa1005410 | -0.814536 | 1.465495e-51 | -8.615850e-47 |
| Msa0388030 | Msa1005410 | -0.826784 | 2.242781e-54 | -8.615850e-47 |
| Msa0389810 | Msa1005410 | 0.860591 | 1.856021e-63 | -8.615850e-47 |
| Msa0394340 | Msa1005410 | 0.820103 | 8.185652e-53 | -8.615850e-47 |
| Msa0409200 | Msa1005410 | 0.815365 | 9.597366e-52 | -8.615850e-47 |
| Msa0412840 | Msa1005410 | 0.803335 | 3.662351e-49 | -8.615850e-47 |
| Msa0424990 | Msa1005410 | 0.813081 | 3.065448e-51 | -8.615850e-47 |
| Msa0431670 | Msa1005410 | 0.803274 | 3.769420e-49 | -8.615850e-47 |
| Msa0433530 | Msa1005410 | 0.819502 | 1.122903e-52 | -8.615850e-47 |
| Msa0436370 | Msa1005410 | 0.815283 | 1.000813e-51 | -8.615850e-47 |
| Msa0445280 | Msa1005410 | 0.800339 | 1.509381e-48 | -8.615850e-47 |
| Msa0449760 | Msa1005410 | 0.830092 | 3.568201e-55 | -8.615850e-47 |
| Msa0458440 | Msa1005410 | 0.852098 | 5.766738e-61 | -8.615850e-47 |
| Msa0464900 | Msa1005410 | 0.859377 | 4.315486e-63 | -8.615850e-47 |
| Msa0466390 | Msa1005410 | 0.802914 | 4.474864e-49 | -8.615850e-47 |
| Msa0468130 | Msa1005410 | 0.857332 | 1.753900e-62 | -8.615850e-47 |
| Msa0473240 | Msa1005410 | 0.857494 | 1.571348e-62 | -8.615850e-47 |
| Msa0477130 | Msa1005410 | -0.817463 | 3.254893e-52 | -8.615850e-47 |
| Msa0477260 | Msa1005410 | 0.814888 | 1.225039e-51 | -8.615850e-47 |
| Msa0482190 | Msa1005410 | -0.844185 | 8.840784e-59 | -8.615850e-47 |
| Msa0981310 | Msa1005410 | 0.800628 | 1.318278e-48 | -8.615850e-47 |
| Msa0982240 | Msa1005410 | 0.824743 | 6.841957e-54 | -8.615850e-47 |
| Msa0982270 | Msa1005410 | 0.854478 | 1.198290e-61 | -8.615850e-47 |
| Msa0993530 | Msa1005410 | 0.814938 | 1.193926e-51 | -8.615850e-47 |
| Msa0999040 | Msa1005410 | 0.813754 | 2.181454e-51 | -8.615850e-47 |
| Msa1005410 | Msa1006850 | 0.849727 | 2.685294e-60 | -8.615850e-47 |
| Msa1005410 | Msa1015790 | 0.818598 | 1.803183e-52 | -8.615850e-47 |
| Msa1005410 | Msa1021340 | 0.830622 | 2.647889e-55 | -8.615850e-47 |
| Msa1005410 | Msa1021510 | 0.838413 | 2.918829e-57 | -8.615850e-47 |
| Msa1005410 | Msa1031770 | 0.805778 | 1.132699e-49 | -8.615850e-47 |
| Msa1005410 | Msa1037700 | -0.800683 | 1.284412e-48 | -8.615850e-47 |
| Msa1005410 | Msa1039880 | 0.826946 | 2.052425e-54 | -8.615850e-47 |
| Msa1005410 | Msa1047720 | 0.845956 | 2.939008e-59 | -8.615850e-47 |
| Msa1005410 | Msa1059570 | 0.810132 | 1.342016e-50 | -8.615850e-47 |
| Msa1005410 | Msa1075080 | -0.826036 | 3.380821e-54 | -8.615850e-47 |
| Msa1005410 | Msa1075220 | -0.825248 | 5.199226e-54 | -8.615850e-47 |
| Msa1005410 | Msa1080160 | 0.807360 | 5.251439e-50 | -8.615850e-47 |
| Msa1005410 | Msa1082500 | 0.827419 | 1.580579e-54 | -8.615850e-47 |
| Msa1005410 | Msa1084260 | 0.838906 | 2.177449e-57 | -8.615850e-47 |
| Msa1005410 | Msa1085300 | 0.802698 | 4.958122e-49 | -8.615850e-47 |
| Msa1005410 | Msa1091670 | 0.857064 | 2.104941e-62 | -8.615850e-47 |
| Msa1005410 | Msa1092090 | 0.853129 | 2.930757e-61 | -8.615850e-47 |
| Msa1005410 | Msa1100480 | 0.847293 | 1.267123e-59 | -8.615850e-47 |
| Msa1005410 | Msa1105500 | 0.829845 | 4.098540e-55 | -8.615850e-47 |
| Msa1005410 | Msa1116130 | -0.811689 | 6.175966e-51 | -8.615850e-47 |
| Msa1005410 | Msa1116690 | 0.807389 | 5.177692e-50 | -8.615850e-47 |
| Msa1005410 | Msa1118760 | 0.802699 | 4.957362e-49 | -8.615850e-47 |
| Msa1005410 | Msa1124540 | -0.821478 | 3.952010e-53 | -8.615850e-47 |
| Msa1005410 | Msa1130110 | 0.806548 | 7.798802e-50 | -8.615850e-47 |
| Msa1005410 | Msa1135880 | 0.814468 | 1.517521e-51 | -8.615850e-47 |
| Msa1005410 | Msa1139000 | -0.816895 | 4.367775e-52 | -8.615850e-47 |
| Msa1005410 | Msa1162550 | -0.831957 | 1.243270e-55 | -8.615850e-47 |
| Msa1005410 | Msa1170800 | 0.818656 | 1.749410e-52 | -8.615850e-47 |
| Msa1005410 | Msa1174310 | 0.814791 | 1.287205e-51 | -8.615850e-47 |
| Msa1005410 | Msa1207380 | 0.824281 | 8.786317e-54 | -8.615850e-47 |
| Msa1005410 | Msa1207420 | 0.807154 | 5.806829e-50 | -8.615850e-47 |
| Msa1005410 | Msa1217810 | 0.819894 | 9.139890e-53 | -8.615850e-47 |
| Msa1005410 | Msa1230830 | 0.807628 | 4.606356e-50 | -8.615850e-47 |
| Msa1005410 | Msa1233500 | 0.827308 | 1.680987e-54 | -8.615850e-47 |
| Msa1005410 | Msa1235400 | 0.831850 | 1.321287e-55 | -8.615850e-47 |
| Msa1005410 | Msa1247030 | 0.806866 | 6.679385e-50 | -8.615850e-47 |
| Msa1005410 | Msa1257600 | 0.816703 | 4.824428e-52 | -8.615850e-47 |
| Msa1005410 | Msa1258380 | -0.843024 | 1.806931e-58 | -8.615850e-47 |
| Msa1005410 | Msa1276440 | 0.840045 | 1.101588e-57 | -8.615850e-47 |
| Msa1005410 | Msa1279210 | 0.814588 | 1.427437e-51 | -8.615850e-47 |
| Msa1005410 | Msa1287480 | 0.804434 | 2.164588e-49 | -8.615850e-47 |
| Msa1005410 | Msa1289530 | 0.816971 | 4.200725e-52 | -8.615850e-47 |
| Msa1005410 | Msa1299070 | 0.805498 | 1.297070e-49 | -8.615850e-47 |
| Msa1005410 | Msa1306750 | 0.815427 | 9.298767e-52 | -8.615850e-47 |
| Msa1005410 | Msa1307740 | 0.861341 | 1.098234e-63 | -8.615850e-47 |
| Msa1005410 | Msa1309880 | 0.826148 | 3.179972e-54 | -8.615850e-47 |
| Msa1005410 | Msa1314340 | 0.819798 | 9.610530e-53 | -8.615850e-47 |
| Msa1005410 | Msa1314770 | 0.825534 | 4.449054e-54 | -8.615850e-47 |
| Msa1005410 | Msa1322190 | 0.802501 | 5.444976e-49 | -8.615850e-47 |
| Msa1005410 | Msa1335710 | 0.817750 | 2.804126e-52 | -8.615850e-47 |
| Msa1005410 | Msa1340650 | 0.830027 | 3.699284e-55 | -8.615850e-47 |
| Msa1005410 | Msa1348600 | 0.812841 | 3.460788e-51 | -8.615850e-47 |
| Msa1005410 | Msa1362880 | 0.820412 | 6.953414e-53 | -8.615850e-47 |
| Msa1005410 | Msa1376890 | 0.823680 | 1.215926e-53 | -8.615850e-47 |
| Msa1005410 | Msa1379850 | 0.817714 | 2.857842e-52 | -8.615850e-47 |
| Msa1005410 | Msa1382930 | 0.801380 | 9.253068e-49 | -8.615850e-47 |
| Msa1005410 | Msa1390050 | 0.800653 | 1.302680e-48 | -8.615850e-47 |
| Msa1005410 | Msa1404540 | 0.854526 | 1.160469e-61 | -8.615850e-47 |
| Msa1005410 | Msa1408790 | 0.800602 | 1.334752e-48 | -8.615850e-47 |
| Msa1005410 | Msa1417830 | -0.804564 | 2.033582e-49 | -8.615850e-47 |
| Msa1005410 | Msa1425100 | 0.807290 | 5.432940e-50 | -8.615850e-47 |
| Msa1005410 | Msa1431060 | 0.859960 | 2.881041e-63 | -8.615850e-47 |
| Msa1005410 | Msa1435400 | 0.832582 | 8.708757e-56 | -8.615850e-47 |
| Msa1005410 | Msa1437680 | 0.805514 | 1.286977e-49 | -8.615850e-47 |
| Msa1005410 | Msa1440600 | 0.833133 | 6.351384e-56 | -8.615850e-47 |
| Msa1005410 | Msa1440940 | 0.834834 | 2.383794e-56 | -8.615850e-47 |
| Msa1005410 | Msa1444250 | -0.849384 | 3.347465e-60 | -8.615850e-47 |
| Msa1005410 | Msa1445030 | 0.806386 | 8.435308e-50 | -8.615850e-47 |
| Msa1005410 | Msa1445420 | -0.808216 | 3.453387e-50 | -8.615850e-47 |
| Msa1005410 | Msa1447150 | 0.825642 | 4.193706e-54 | -8.615850e-47 |
| Msa1005410 | Msa1449350 | -0.802874 | 4.561483e-49 | -8.615850e-47 |
| Msa1005410 | Msa1451620 | -0.847907 | 8.592621e-60 | -8.615850e-47 |
| Msa1005410 | Msa1454860 | 0.824238 | 8.995802e-54 | -8.615850e-47 |
| Msa1005410 | Msa1462930 | 0.804791 | 1.822882e-49 | -8.615850e-47 |
| Msa1005410 | Msa1466730 | 0.811370 | 7.244110e-51 | -8.615850e-47 |
| Msa0243710 | Msa1005410 | 0.808517 | 2.978847e-50 | -8.615850e-47 |
| Msa0249560 | Msa1005410 | 0.822957 | 1.793408e-53 | -8.615850e-47 |
| Msa0250670 | Msa1005410 | 0.818249 | 2.163136e-52 | -8.615850e-47 |
| Msa0258760 | Msa1005410 | 0.807726 | 4.391175e-50 | -8.615850e-47 |
| Msa0260810 | Msa1005410 | 0.861272 | 1.152673e-63 | -8.615850e-47 |
| Msa0266000 | Msa1005410 | -0.800307 | 1.532648e-48 | -8.615850e-47 |
| Msa0269450 | Msa1005410 | 0.830730 | 2.490743e-55 | -8.615850e-47 |
| Msa0271650 | Msa1005410 | 0.804391 | 2.209463e-49 | -8.615850e-47 |
| Msa0282250 | Msa1005410 | 0.822404 | 2.412304e-53 | -8.615850e-47 |
| Msa0289400 | Msa1005410 | 0.813560 | 2.406166e-51 | -8.615850e-47 |
| Msa0306210 | Msa1005410 | -0.800206 | 1.606744e-48 | -8.615850e-47 |
| Msa0323080 | Msa1005410 | 0.803922 | 2.766011e-49 | -8.615850e-47 |
| Msa0323180 | Msa1005410 | 0.827638 | 1.400547e-54 | -8.615850e-47 |
| Msa0326520 | Msa1005410 | 0.815337 | 9.735391e-52 | -8.615850e-47 |
| Msa0335040 | Msa1005410 | 0.826514 | 2.601411e-54 | -8.615850e-47 |
| Msa0344870 | Msa1005410 | 0.810356 | 1.200592e-50 | -8.615850e-47 |
| Msa0354800 | Msa1005410 | -0.810796 | 9.647588e-51 | -8.615850e-47 |
| Msa0484780 | Msa1005410 | 0.829207 | 5.858178e-55 | -8.615850e-47 |
| Msa0485500 | Msa1005410 | -0.836849 | 7.353758e-57 | -8.615850e-47 |
| Msa0489610 | Msa1005410 | 0.829794 | 4.215983e-55 | -8.615850e-47 |
| Msa0516370 | Msa1005410 | 0.828938 | 6.805357e-55 | -8.615850e-47 |
| Msa0517490 | Msa1005410 | 0.831742 | 1.404432e-55 | -8.615850e-47 |
| Msa0536220 | Msa1005410 | 0.824417 | 8.164721e-54 | -8.615850e-47 |
| Msa0553460 | Msa1005410 | 0.846920 | 1.603440e-59 | -8.615850e-47 |
| Msa0558690 | Msa1005410 | 0.832266 | 1.042810e-55 | -8.615850e-47 |
| Msa0562440 | Msa1005410 | 0.802053 | 6.731936e-49 | -8.615850e-47 |
| Msa0567020 | Msa1005410 | 0.811139 | 8.127395e-51 | -8.615850e-47 |
| Msa0572420 | Msa1005410 | 0.816420 | 5.580677e-52 | -8.615850e-47 |
| Msa0572480 | Msa1005410 | 0.805673 | 1.191426e-49 | -8.615850e-47 |
| Msa0574850 | Msa1005410 | 0.817542 | 3.123631e-52 | -8.615850e-47 |
| Msa0575470 | Msa1005410 | 0.820700 | 5.971991e-53 | -8.615850e-47 |
| Msa0578970 | Msa1005410 | 0.807685 | 4.480438e-50 | -8.615850e-47 |
| Msa0579130 | Msa1005410 | 0.821751 | 3.417468e-53 | -8.615850e-47 |
| Msa0580000 | Msa1005410 | 0.815908 | 7.265017e-52 | -8.615850e-47 |
| Msa0587190 | Msa1005410 | 0.811806 | 5.824218e-51 | -8.615850e-47 |
| Msa0599580 | Msa1005410 | 0.832031 | 1.191812e-55 | -8.615850e-47 |
| Msa0599890 | Msa1005410 | 0.808426 | 3.115614e-50 | -8.615850e-47 |
| Msa0845070 | Msa1005410 | 0.800416 | 1.455898e-48 | -8.615850e-47 |
| Msa0847880 | Msa1005410 | 0.804584 | 2.013557e-49 | -8.615850e-47 |
| Msa0848900 | Msa1005410 | 0.850467 | 1.666295e-60 | -8.615850e-47 |
| Msa0860410 | Msa1005410 | 0.818747 | 1.668382e-52 | -8.615850e-47 |
| Msa0870530 | Msa1005410 | 0.808306 | 3.304403e-50 | -8.615850e-47 |
| Msa0876580 | Msa1005410 | 0.801898 | 7.246105e-49 | -8.615850e-47 |
| Msa0882510 | Msa1005410 | 0.823851 | 1.108809e-53 | -8.615850e-47 |
| Msa0896220 | Msa1005410 | 0.814477 | 1.510646e-51 | -8.615850e-47 |
| Msa0907070 | Msa1005410 | 0.809860 | 1.535896e-50 | -8.615850e-47 |
| Msa0908170 | Msa1005410 | 0.845244 | 4.582753e-59 | -8.615850e-47 |
| Msa0910980 | Msa1005410 | -0.816493 | 5.374445e-52 | -8.615850e-47 |
| Msa0927670 | Msa1005410 | 0.809914 | 1.495014e-50 | -8.615850e-47 |
| Msa0946080 | Msa1005410 | 0.805647 | 1.206902e-49 | -8.615850e-47 |
| Msa0946690 | Msa1005410 | -0.805952 | 1.041195e-49 | -8.615850e-47 |
| Msa0960160 | Msa1005410 | 0.813852 | 2.074837e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1005410 | MtrunA17_Chr7g0215661 | 80.818 | 391 | 46 | 6 | 10 | 378 | 2 | 385 | 0.0 | 600 |
| Msa1005410 | MtrunA17_Chr8g0357161 | 74.033 | 181 | 30 | 3 | 217 | 382 | 6 | 184 | 3.26e-83 | 251 |
| Msa1005410 | MtrunA17_Chr8g0357141 | 85.185 | 135 | 14 | 1 | 254 | 382 | 1 | 135 | 6.55e-77 | 233 |
| Msa1005410 | MtrunA17_Chr8g0335221 | 37.132 | 272 | 136 | 8 | 81 | 327 | 79 | 340 | 2.39e-40 | 147 |
| Msa1005410 | MtrunA17_Chr4g0045601 | 28.099 | 242 | 126 | 7 | 129 | 330 | 98 | 331 | 6.96e-18 | 85.1 |
| Msa1005410 | MtrunA17_Chr4g0045591 | 27.568 | 185 | 109 | 5 | 127 | 293 | 82 | 259 | 1.09e-12 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1005410 | AT4G37440.2 | 27.597 | 308 | 148 | 8 | 57 | 328 | 72 | 340 | 8.79e-23 | 99.8 |
| Msa1005410 | AT4G37440.1 | 27.597 | 308 | 148 | 8 | 57 | 328 | 72 | 340 | 1.14e-22 | 99.8 |
| Msa1005410 | AT3G59670.1 | 31.698 | 265 | 138 | 12 | 130 | 366 | 131 | 380 | 1.17e-22 | 99.8 |
| Msa1005410 | AT4G37440.3 | 27.597 | 308 | 148 | 8 | 57 | 328 | 72 | 340 | 1.73e-22 | 98.6 |
| Msa1005410 | AT3G50040.2 | 40.741 | 108 | 49 | 1 | 124 | 216 | 101 | 208 | 3.21e-16 | 80.1 |
| Msa1005410 | AT3G50040.4 | 40.741 | 108 | 49 | 1 | 124 | 216 | 101 | 208 | 3.21e-16 | 80.1 |
| Msa1005410 | AT3G50040.1 | 40.741 | 108 | 49 | 1 | 124 | 216 | 101 | 208 | 3.21e-16 | 80.1 |
| Msa1005410 | AT3G50040.3 | 46.988 | 83 | 44 | 0 | 124 | 206 | 101 | 183 | 4.58e-16 | 79.3 |
Find 58 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTGTCAAGTTCAATTTC+TGG | 0.179280 | 7_1:-3065675 | None:intergenic |
| CATTTAGAGCGCCACATTAT+AGG | 0.242366 | 7_1:-3067491 | None:intergenic |
| CTATAATGTGGCGCTCTAAA+TGG | 0.246676 | 7_1:+3067492 | Msa1005410:CDS |
| TAGGACCCAGTTTGAGGTTC+AGG | 0.293038 | 7_1:+3068484 | Msa1005410:CDS |
| AAGTTTGCAGTAGACGATTT+TGG | 0.304395 | 7_1:+3067608 | Msa1005410:CDS |
| AGTTCAAGTTCTAGTTCTTT+TGG | 0.310205 | 7_1:+3065906 | Msa1005410:CDS |
| TTTCTCCCTGAACCTCAAAC+TGG | 0.332711 | 7_1:-3068490 | None:intergenic |
| AACATAGTTGGGCCATCTAA+TGG | 0.350082 | 7_1:+3068302 | Msa1005410:CDS |
| CTTTGAATTCCCTCAGATCT+AGG | 0.356218 | 7_1:-3067644 | None:intergenic |
| AACCTCAAACTGGGTCCTAT+TGG | 0.372953 | 7_1:-3068480 | None:intergenic |
| GTTGCAGAACAGAACTTTCC+AGG | 0.381277 | 7_1:-3068272 | None:intergenic |
| TGGAACCAGAATTTCTTTAC+CGG | 0.385709 | 7_1:-3068360 | None:intergenic |
| TCTTGTCAAGTTCAATTTCT+GGG | 0.400162 | 7_1:-3065674 | None:intergenic |
| GCTCATGATGGTCCCGTAGA+AGG | 0.405262 | 7_1:+3067862 | Msa1005410:CDS |
| AGAAGGAATGTGCAATTGAT+TGG | 0.419949 | 7_1:+3066884 | Msa1005410:CDS |
| TTGCACATTCCTTCTGTATG+TGG | 0.428353 | 7_1:-3066876 | None:intergenic |
| GAACTTGACAAGATAGTAGA+AGG | 0.433406 | 7_1:+3065684 | Msa1005410:CDS |
| GAACGATTAAATCCATTAGA+TGG | 0.440535 | 7_1:-3068314 | None:intergenic |
| GCAACTCAATCGAACATAGT+TGG | 0.450765 | 7_1:+3068290 | Msa1005410:CDS |
| AAGGTAATGCTGATAATGTT+GGG | 0.452199 | 7_1:+3068102 | Msa1005410:intron |
| GGTAAAGAAATTCTGGTTCC+AGG | 0.453139 | 7_1:+3068362 | Msa1005410:CDS |
| ACTAGTTCTGATTCTGCATT+CGG | 0.464087 | 7_1:+3065939 | Msa1005410:CDS |
| ATCATCATGAAAACCTTCTA+CGG | 0.468644 | 7_1:-3067875 | None:intergenic |
| CAACTCAATCGAACATAGTT+GGG | 0.478639 | 7_1:+3068291 | Msa1005410:CDS |
| CTACGGGACCATCATGAGCT+TGG | 0.481763 | 7_1:-3067858 | None:intergenic |
| AGGACCCAGTTTGAGGTTCA+GGG | 0.482936 | 7_1:+3068485 | Msa1005410:CDS |
| CTTCAGTTGAGTCTGCCAAT+AGG | 0.488684 | 7_1:+3068465 | Msa1005410:CDS |
| TGCCAATAGGACCCAGTTTG+AGG | 0.495444 | 7_1:+3068478 | Msa1005410:CDS |
| GAAGGTAATGCTGATAATGT+TGG | 0.499295 | 7_1:+3068101 | Msa1005410:intron |
| AGATCAAGTTAAACGATATG+TGG | 0.513455 | 7_1:+3068126 | Msa1005410:CDS |
| TTGTAGAGATGAGGAGAATG+TGG | 0.520186 | 7_1:+3065812 | Msa1005410:CDS |
| CAAGAGCACGATGCAGGCAA+TGG | 0.534191 | 7_1:-3068569 | None:intergenic |
| TTCTCCCTGAACCTCAAACT+GGG | 0.539592 | 7_1:-3068489 | None:intergenic |
| AAAAGTTAACTGATCATTGG+AGG | 0.545239 | 7_1:+3067456 | Msa1005410:CDS |
| AAGTTGAGAATTTGAAAACT+CGG | 0.545310 | 7_1:+3068225 | Msa1005410:CDS |
| TCAGATTTAGCGAAACTACC+TGG | 0.561539 | 7_1:-3068380 | None:intergenic |
| ACCGTGAAATATGAAAATCC+TGG | 0.561681 | 7_1:+3068254 | Msa1005410:CDS |
| CAAAACCAAGAGCACGATGC+AGG | 0.569049 | 7_1:-3068575 | None:intergenic |
| ATAGTAGAAGGAGGTGACGT+AGG | 0.572080 | 7_1:+3065696 | Msa1005410:CDS |
| AATGCATTATCAACTCGAGA+AGG | 0.574177 | 7_1:+3068434 | Msa1005410:CDS |
| GTCGTTGTCTTGTAGAGATG+AGG | 0.574630 | 7_1:+3065803 | Msa1005410:CDS |
| CAAGTCAGTACCTAGATCTG+AGG | 0.578521 | 7_1:+3067634 | Msa1005410:CDS |
| TCATCATGAAAACCTTCTAC+GGG | 0.586519 | 7_1:-3067874 | None:intergenic |
| AGGTAATGCTGATAATGTTG+GGG | 0.590800 | 7_1:+3068103 | Msa1005410:intron |
| GATCAAGTTAAACGATATGT+GGG | 0.594999 | 7_1:+3068127 | Msa1005410:CDS |
| GAAATACGTAAAAGAGATTG+CGG | 0.605017 | 7_1:+3067553 | Msa1005410:CDS |
| AAGTCAGTACCTAGATCTGA+GGG | 0.610939 | 7_1:+3067635 | Msa1005410:CDS |
| AGTTAACTGATCATTGGAGG+AGG | 0.614517 | 7_1:+3067459 | Msa1005410:CDS |
| GGTACATCTTTCCTATAATG+TGG | 0.617709 | 7_1:+3067480 | Msa1005410:CDS |
| ATGCATTATCAACTCGAGAA+GGG | 0.618272 | 7_1:+3068435 | Msa1005410:CDS |
| AGGAACTAACCACATACAGA+AGG | 0.622698 | 7_1:+3066867 | Msa1005410:CDS |
| AGAACCAAAAGAACAAAATG+TGG | 0.626642 | 7_1:+3065767 | Msa1005410:CDS |
| CTATTGGCAGACTCAACTGA+AGG | 0.634161 | 7_1:-3068464 | None:intergenic |
| CTAGATCTGAGGGAATTCAA+AGG | 0.647893 | 7_1:+3067645 | Msa1005410:CDS |
| ATGTGCAATTGATTGGATCG+AGG | 0.668982 | 7_1:+3066891 | Msa1005410:CDS |
| CTTGACAAGATAGTAGAAGG+AGG | 0.682145 | 7_1:+3065687 | Msa1005410:CDS |
| TCATCTCTACAAGACAACGA+CGG | 0.716546 | 7_1:-3065801 | None:intergenic |
| GGGTGTGGAAGATAATTGTG+TGG | 0.726932 | 7_1:+3065866 | Msa1005410:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTGTTTTACTTTTTAAATA+TGG | + | chr7_1:3066188-3066207 | Msa1005410:intron | 10.0% |
| !!! | AATAAAAAGAACATTTTAAT+TGG | - | chr7_1:3067030-3067049 | None:intergenic | 10.0% |
| !! | ATGAAAAAACATTATATTAT+GGG | - | chr7_1:3067920-3067939 | None:intergenic | 10.0% |
| !! | AATGAAAAAACATTATATTA+TGG | - | chr7_1:3067921-3067940 | None:intergenic | 10.0% |
| !! | ATCATATATAGAAGATAAAA+AGG | - | chr7_1:3067163-3067182 | None:intergenic | 15.0% |
| !!! | TTGATGTTTATTCATGATTT+TGG | + | chr7_1:3065387-3065406 | Msa1005410:intron | 20.0% |
| !! | AATGTGGAAGTTAATATAAT+TGG | + | chr7_1:3065828-3065847 | Msa1005410:intron | 20.0% |
| !! | ATGTGGAAGTTAATATAATT+GGG | + | chr7_1:3065829-3065848 | Msa1005410:intron | 20.0% |
| !!! | TTTCTCAATGTTTTAGTTAT+TGG | + | chr7_1:3066030-3066049 | Msa1005410:intron | 20.0% |
| !!! | CAATCTTTTAAAAATCAAAC+TGG | - | chr7_1:3066259-3066278 | None:intergenic | 20.0% |
| !! | TTTCTTAATAGTTTCTCTTA+TGG | - | chr7_1:3066416-3066435 | None:intergenic | 20.0% |
| !!! | CAATTCAATTAATCCTTTTT+TGG | + | chr7_1:3066765-3066784 | Msa1005410:intron | 20.0% |
| !!! | GAAGCAATAAAACAATTTTT+TGG | + | chr7_1:3066798-3066817 | Msa1005410:intron | 20.0% |
| !! | ATTGAAAAACCTAACAAAAA+AGG | + | chr7_1:3066847-3066866 | Msa1005410:CDS | 20.0% |
| !! | ATATATAGAAGATAAAAAGG+AGG | - | chr7_1:3067160-3067179 | None:intergenic | 20.0% |
| !! | AAAAACATTATATTATGGGA+TGG | - | chr7_1:3067916-3067935 | None:intergenic | 20.0% |
| !!! | ATTATGAACATTTTTCAAAC+TGG | + | chr7_1:3068039-3068058 | Msa1005410:intron | 20.0% |
| !!! | TAGCATGTGATTTTTTCATA+TGG | + | chr7_1:3065443-3065462 | Msa1005410:intron | 25.0% |
| !!! | AGCATGTGATTTTTTCATAT+GGG | + | chr7_1:3065444-3065463 | Msa1005410:intron | 25.0% |
| ! | GTTAATATAATTGGGAATTC+TGG | + | chr7_1:3065837-3065856 | Msa1005410:intron | 25.0% |
| !!! | AAAGATTGATGTTGTTTTTG+TGG | + | chr7_1:3066271-3066290 | Msa1005410:intron | 25.0% |
| ! | AGATCTAGAAATTAATCAGT+TGG | + | chr7_1:3066435-3066454 | Msa1005410:intron | 25.0% |
| ! | TAATCAGTTGGATCAAAATA+TGG | + | chr7_1:3066447-3066466 | Msa1005410:intron | 25.0% |
| ! | TGGTTTATGATAGAACATTA+CGG | + | chr7_1:3066467-3066486 | Msa1005410:intron | 25.0% |
| !!! | TGTTGTTAATGTTGTTTTTG+TGG | + | chr7_1:3066598-3066617 | Msa1005410:intron | 25.0% |
| !!! | AAAACAATTTTTTGGCCTAT+AGG | + | chr7_1:3066806-3066825 | Msa1005410:intron | 25.0% |
| ! | TACATCATAAATGTCATGTT+TGG | + | chr7_1:3067302-3067321 | Msa1005410:intron | 25.0% |
| !! | ATTTTCAAATTACCTTGTGT+TGG | + | chr7_1:3067325-3067344 | Msa1005410:intron | 25.0% |
| !!! | GCTGCTATGTATTTTTTATA+AGG | + | chr7_1:3067347-3067366 | Msa1005410:intron | 25.0% |
| ! | AGAAAAAGTTAACTGATCAT+TGG | + | chr7_1:3067453-3067472 | Msa1005410:CDS | 25.0% |
| ! | TGATGATAAATCACATTCTT+CGG | - | chr7_1:3067705-3067724 | None:intergenic | 25.0% |
| ! | TACTATGGTATGAAATTACT+TGG | + | chr7_1:3067752-3067771 | Msa1005410:intron | 25.0% |
| ! | TTTGTTTCATTGATATGAGA+AGG | + | chr7_1:3068083-3068102 | Msa1005410:intron | 25.0% |
| ! | AAGTTGAGAATTTGAAAACT+CGG | + | chr7_1:3068225-3068244 | Msa1005410:CDS | 25.0% |
| TAGCATGCAATTTCTTCATA+CGG | + | chr7_1:3065573-3065592 | Msa1005410:intron | 30.0% | |
| ATACGGGTCTATGATTATAT+CGG | + | chr7_1:3065590-3065609 | Msa1005410:intron | 30.0% | |
| !!! | CGATTATGAAGTTTTAGCTA+TGG | + | chr7_1:3065620-3065639 | Msa1005410:intron | 30.0% |
| CAGATAATGAGTGAAAAAAC+TGG | + | chr7_1:3065651-3065670 | Msa1005410:CDS | 30.0% | |
| TCTTGTCAAGTTCAATTTCT+GGG | - | chr7_1:3065677-3065696 | None:intergenic | 30.0% | |
| ATCTTGTCAAGTTCAATTTC+TGG | - | chr7_1:3065678-3065697 | None:intergenic | 30.0% | |
| AGAACCAAAAGAACAAAATG+TGG | + | chr7_1:3065767-3065786 | Msa1005410:CDS | 30.0% | |
| ! | TTAGCCACATTTTGTTCTTT+TGG | - | chr7_1:3065774-3065793 | None:intergenic | 30.0% |
| !!! | AGTTCAAGTTCTAGTTCTTT+TGG | + | chr7_1:3065906-3065925 | Msa1005410:CDS | 30.0% |
| ! | GTTTCTCTTATGGTTTTTCT+AGG | - | chr7_1:3066406-3066425 | None:intergenic | 30.0% |
| TCTTAACTCTCTGATTCTTA+GGG | + | chr7_1:3066621-3066640 | Msa1005410:intron | 30.0% | |
| !!! | TTAATCCTTTTTTGGCCTAT+AGG | + | chr7_1:3066773-3066792 | Msa1005410:intron | 30.0% |
| !! | GTTTTATTGCTTCTTCCTAT+AGG | - | chr7_1:3066791-3066810 | None:intergenic | 30.0% |
| !! | GTTTTATTGCTTCTTCCTAT+AGG | - | chr7_1:3066791-3066810 | None:intergenic | 30.0% |
| !!! | TGGTTAGTTCCTTTTTTGTT+AGG | - | chr7_1:3066859-3066878 | None:intergenic | 30.0% |
| !! | GCATGAATATCCTTAGTTTT+AGG | + | chr7_1:3066938-3066957 | Msa1005410:intron | 30.0% |
| AAGTATCTGAACATGTTATC+AGG | - | chr7_1:3066996-3067015 | None:intergenic | 30.0% | |
| CATGTTCAGATACTTCATTT+AGG | + | chr7_1:3067001-3067020 | Msa1005410:intron | 30.0% | |
| !! | CTGTATTTCATAACTTGTTG+TGG | + | chr7_1:3067102-3067121 | Msa1005410:intron | 30.0% |
| TTCTATATTTCGGACATTAG+TGG | + | chr7_1:3067221-3067240 | Msa1005410:intron | 30.0% | |
| AATACGTTTAAACACTGACA+CGG | - | chr7_1:3067414-3067433 | None:intergenic | 30.0% | |
| AAAAGTTAACTGATCATTGG+AGG | + | chr7_1:3067456-3067475 | Msa1005410:CDS | 30.0% | |
| GAAATACGTAAAAGAGATTG+CGG | + | chr7_1:3067553-3067572 | Msa1005410:CDS | 30.0% | |
| TTCAAAGGACTAAAGTAATG+TGG | + | chr7_1:3067660-3067679 | Msa1005410:intron | 30.0% | |
| CATAGTACGAGAAAAAACAA+TGG | - | chr7_1:3067739-3067758 | None:intergenic | 30.0% | |
| !!! | CATTGTTTTTTCTCGTACTA+TGG | + | chr7_1:3067737-3067756 | Msa1005410:intron | 30.0% |
| AATAAAAACCAAGCTCATGA+TGG | + | chr7_1:3067850-3067869 | Msa1005410:CDS | 30.0% | |
| ATCATCATGAAAACCTTCTA+CGG | - | chr7_1:3067878-3067897 | None:intergenic | 30.0% | |
| GTTAAAGTGTGAATCAAACA+AGG | + | chr7_1:3067962-3067981 | Msa1005410:intron | 30.0% | |
| ! | AAGGTAATGCTGATAATGTT+GGG | + | chr7_1:3068102-3068121 | Msa1005410:intron | 30.0% |
| AGATCAAGTTAAACGATATG+TGG | + | chr7_1:3068126-3068145 | Msa1005410:CDS | 30.0% | |
| GATCAAGTTAAACGATATGT+GGG | + | chr7_1:3068127-3068146 | Msa1005410:CDS | 30.0% | |
| ! | ATTTTCAATCATGTCAACGA+AGG | - | chr7_1:3068186-3068205 | None:intergenic | 30.0% |
| ! | TCCAGGATTTTCATATTTCA+CGG | - | chr7_1:3068258-3068277 | None:intergenic | 30.0% |
| GAACGATTAAATCCATTAGA+TGG | - | chr7_1:3068317-3068336 | None:intergenic | 30.0% | |
| AGCATGCAATTTCTTCATAC+GGG | + | chr7_1:3065574-3065593 | Msa1005410:intron | 35.0% | |
| GAACTTGACAAGATAGTAGA+AGG | + | chr7_1:3065684-3065703 | Msa1005410:CDS | 35.0% | |
| !! | AATTGGGAATTCTGGTTTCA+AGG | + | chr7_1:3065845-3065864 | Msa1005410:intron | 35.0% |
| !! | ATTGGGAATTCTGGTTTCAA+GGG | + | chr7_1:3065846-3065865 | Msa1005410:intron | 35.0% |
| !! | ACTAGTTCTGATTCTGCATT+CGG | + | chr7_1:3065939-3065958 | Msa1005410:CDS | 35.0% |
| GAAACATACCTCAATAGAAG+TGG | - | chr7_1:3066014-3066033 | None:intergenic | 35.0% | |
| TTTAGTTATTGGACCGAACT+AGG | + | chr7_1:3066041-3066060 | Msa1005410:intron | 35.0% | |
| GATTGAACTAGGTTTAACCA+TGG | + | chr7_1:3066129-3066148 | Msa1005410:intron | 35.0% | |
| AAAACAAGATGAACCAACCA+TGG | - | chr7_1:3066149-3066168 | None:intergenic | 35.0% | |
| ATATCGAATTGATGAGACCT+TGG | - | chr7_1:3066236-3066255 | None:intergenic | 35.0% | |
| GTCATGTAAGTGTTCTTGTA+AGG | + | chr7_1:3066333-3066352 | Msa1005410:intron | 35.0% | |
| GTCTTAACTCTCTGATTCTT+AGG | + | chr7_1:3066620-3066639 | Msa1005410:intron | 35.0% | |
| ! | GTCTTTGATAATCTGGAGTT+CGG | + | chr7_1:3066650-3066669 | Msa1005410:intron | 35.0% |
| TTCTTCCTATAGGCCAAAAA+AGG | - | chr7_1:3066781-3066800 | None:intergenic | 35.0% | |
| AGAAGGAATGTGCAATTGAT+TGG | + | chr7_1:3066884-3066903 | Msa1005410:CDS | 35.0% | |
| !! | ACAAAAGTGTCTCTTTACAC+TGG | - | chr7_1:3067080-3067099 | None:intergenic | 35.0% |
| CGAAATATAGAACACTGACA+CGG | - | chr7_1:3067213-3067232 | None:intergenic | 35.0% | |
| CGTGTCAGTGTTCTATATTT+CGG | + | chr7_1:3067211-3067230 | Msa1005410:intron | 35.0% | |
| GGTACATCTTTCCTATAATG+TGG | + | chr7_1:3067480-3067499 | Msa1005410:CDS | 35.0% | |
| ! | AAGTTTGCAGTAGACGATTT+TGG | + | chr7_1:3067608-3067627 | Msa1005410:CDS | 35.0% |
| AAGTAATGTGGAGAAAGAAC+AGG | + | chr7_1:3067672-3067691 | Msa1005410:intron | 35.0% | |
| ACTATCAACGCAAAATACAC+TGG | - | chr7_1:3067800-3067819 | None:intergenic | 35.0% | |
| !! | TGAGCTTGGTTTTTATTCTC+TGG | - | chr7_1:3067847-3067866 | None:intergenic | 35.0% |
| TCATCATGAAAACCTTCTAC+GGG | - | chr7_1:3067877-3067896 | None:intergenic | 35.0% | |
| ! | GAAGGTAATGCTGATAATGT+TGG | + | chr7_1:3068101-3068120 | Msa1005410:intron | 35.0% |
| ! | AGGTAATGCTGATAATGTTG+GGG | + | chr7_1:3068103-3068122 | Msa1005410:intron | 35.0% |
| ACCGTGAAATATGAAAATCC+TGG | + | chr7_1:3068254-3068273 | Msa1005410:CDS | 35.0% | |
| CAACTCAATCGAACATAGTT+GGG | + | chr7_1:3068291-3068310 | Msa1005410:CDS | 35.0% | |
| ! | CATAATTCTGCTTCTTTTGC+CGG | + | chr7_1:3068341-3068360 | Msa1005410:CDS | 35.0% |
| ! | TTTTGCCGGTAAAGAAATTC+TGG | + | chr7_1:3068355-3068374 | Msa1005410:CDS | 35.0% |
| TGGAACCAGAATTTCTTTAC+CGG | - | chr7_1:3068363-3068382 | None:intergenic | 35.0% | |
| AATGCATTATCAACTCGAGA+AGG | + | chr7_1:3068434-3068453 | Msa1005410:CDS | 35.0% | |
| ATGCATTATCAACTCGAGAA+GGG | + | chr7_1:3068435-3068454 | Msa1005410:CDS | 35.0% | |
| CTTGACAAGATAGTAGAAGG+AGG | + | chr7_1:3065687-3065706 | Msa1005410:CDS | 40.0% | |
| TCATCTCTACAAGACAACGA+CGG | - | chr7_1:3065804-3065823 | None:intergenic | 40.0% | |
| TTGTAGAGATGAGGAGAATG+TGG | + | chr7_1:3065812-3065831 | Msa1005410:CDS | 40.0% | |
| !! | TTTGCTGGTTGATTTGAGCT+CGG | + | chr7_1:3066081-3066100 | Msa1005410:intron | 40.0% |
| TACCTTACTCTAGTTGAACC+AGG | + | chr7_1:3066107-3066126 | Msa1005410:intron | 40.0% | |
| ATCCTGGTTCAACTAGAGTA+AGG | - | chr7_1:3066112-3066131 | None:intergenic | 40.0% | |
| AGTTGAACCAGGATTGAACT+AGG | + | chr7_1:3066118-3066137 | Msa1005410:intron | 40.0% | |
| GGTTAAACCTAGTTCAATCC+TGG | - | chr7_1:3066128-3066147 | None:intergenic | 40.0% | |
| GAACTAGGTTTAACCATGGT+TGG | + | chr7_1:3066133-3066152 | Msa1005410:intron | 40.0% | |
| TTGTGGTGCAAACTAGACTT+AGG | + | chr7_1:3066288-3066307 | Msa1005410:intron | 40.0% | |
| ACTCTCTGATTCTTAGGGAA+AGG | + | chr7_1:3066626-3066645 | Msa1005410:intron | 40.0% | |
| CTCTCTGATTCTTAGGGAAA+GGG | + | chr7_1:3066627-3066646 | Msa1005410:intron | 40.0% | |
| TCTCTGATTCTTAGGGAAAG+GGG | + | chr7_1:3066628-3066647 | Msa1005410:intron | 40.0% | |
| ! | GAAAGGGGTCTTTGATAATC+TGG | + | chr7_1:3066643-3066662 | Msa1005410:intron | 40.0% |
| GCTGGAAGGTAAGTAAAGTA+CGG | + | chr7_1:3066672-3066691 | Msa1005410:intron | 40.0% | |
| CTGGAAGGTAAGTAAAGTAC+GGG | + | chr7_1:3066673-3066692 | Msa1005410:intron | 40.0% | |
| TGGAAGGTAAGTAAAGTACG+GGG | + | chr7_1:3066674-3066693 | Msa1005410:intron | 40.0% | |
| TTTCAGCCAGGATTCAAACT+CGG | + | chr7_1:3066705-3066724 | Msa1005410:intron | 40.0% | |
| AAAAACCCGAGTTTGAATCC+TGG | - | chr7_1:3066714-3066733 | None:intergenic | 40.0% | |
| AGGAACTAACCACATACAGA+AGG | + | chr7_1:3066867-3066886 | Msa1005410:CDS | 40.0% | |
| TTGCACATTCCTTCTGTATG+TGG | - | chr7_1:3066879-3066898 | None:intergenic | 40.0% | |
| ATGTGCAATTGATTGGATCG+AGG | + | chr7_1:3066891-3066910 | Msa1005410:CDS | 40.0% | |
| TTATTTCACACCGACACGTT+CGG | + | chr7_1:3067045-3067064 | Msa1005410:intron | 40.0% | |
| TCATGAGAACCTATGAAGCA+CGG | - | chr7_1:3067264-3067283 | None:intergenic | 40.0% | |
| AATACATAGCAGCCAACACA+AGG | - | chr7_1:3067340-3067359 | None:intergenic | 40.0% | |
| AGTTAACTGATCATTGGAGG+AGG | + | chr7_1:3067459-3067478 | Msa1005410:CDS | 40.0% | |
| ! | CATTTAGAGCGCCACATTAT+AGG | - | chr7_1:3067494-3067513 | None:intergenic | 40.0% |
| ! | CTATAATGTGGCGCTCTAAA+TGG | + | chr7_1:3067492-3067511 | Msa1005410:CDS | 40.0% |
| AAGTCAGTACCTAGATCTGA+GGG | + | chr7_1:3067635-3067654 | Msa1005410:CDS | 40.0% | |
| CTTTGAATTCCCTCAGATCT+AGG | - | chr7_1:3067647-3067666 | None:intergenic | 40.0% | |
| CTAGATCTGAGGGAATTCAA+AGG | + | chr7_1:3067645-3067664 | Msa1005410:CDS | 40.0% | |
| !! | AGGTTTTCATGATGATGTCG+TGG | + | chr7_1:3067882-3067901 | Msa1005410:CDS | 40.0% |
| !! | GGTTTTCATGATGATGTCGT+GGG | + | chr7_1:3067883-3067902 | Msa1005410:CDS | 40.0% |
| GCAACTCAATCGAACATAGT+TGG | + | chr7_1:3068290-3068309 | Msa1005410:CDS | 40.0% | |
| AACATAGTTGGGCCATCTAA+TGG | + | chr7_1:3068302-3068321 | Msa1005410:CDS | 40.0% | |
| !! | GGTAAAGAAATTCTGGTTCC+AGG | + | chr7_1:3068362-3068381 | Msa1005410:CDS | 40.0% |
| TCAGATTTAGCGAAACTACC+TGG | - | chr7_1:3068383-3068402 | None:intergenic | 40.0% | |
| ATAGTAGAAGGAGGTGACGT+AGG | + | chr7_1:3065696-3065715 | Msa1005410:CDS | 45.0% | |
| GTCGTTGTCTTGTAGAGATG+AGG | + | chr7_1:3065803-3065822 | Msa1005410:CDS | 45.0% | |
| !! | GAATTCTGGTTTCAAGGGTG+TGG | + | chr7_1:3065851-3065870 | Msa1005410:intron | 45.0% |
| GGGTGTGGAAGATAATTGTG+TGG | + | chr7_1:3065866-3065885 | Msa1005410:intron | 45.0% | |
| ! | TTCTGCATTCGGTGATTCTG+AGG | + | chr7_1:3065950-3065969 | Msa1005410:intron | 45.0% |
| GGAGAAAGCCACTTCTATTG+AGG | + | chr7_1:3066003-3066022 | Msa1005410:intron | 45.0% | |
| ATTGGACCGAACTAGGAAGT+AGG | + | chr7_1:3066048-3066067 | Msa1005410:intron | 45.0% | |
| AAATCAACCAGCAAACTGCC+CGG | - | chr7_1:3066076-3066095 | None:intergenic | 45.0% | |
| CCTTGGAGTCATGCTTCAAT+TGG | - | chr7_1:3066219-3066238 | None:intergenic | 45.0% | |
| CCAATTGAAGCATGACTCCA+AGG | + | chr7_1:3066216-3066235 | Msa1005410:intron | 45.0% | |
| ! | TTGATAATCTGGAGTTCGGC+TGG | + | chr7_1:3066654-3066673 | Msa1005410:intron | 45.0% |
| TTCAGCCAGGATTCAAACTC+GGG | + | chr7_1:3066706-3066725 | Msa1005410:intron | 45.0% | |
| GCAGGACACACCTAAAACTA+AGG | - | chr7_1:3066951-3066970 | None:intergenic | 45.0% | |
| TATTTCACACCGACACGTTC+GGG | + | chr7_1:3067046-3067065 | Msa1005410:intron | 45.0% | |
| CAAGTCAGTACCTAGATCTG+AGG | + | chr7_1:3067634-3067653 | Msa1005410:CDS | 45.0% | |
| ! | ATGATGATGTCGTGGGTAAG+TGG | + | chr7_1:3067890-3067909 | Msa1005410:intron | 45.0% |
| GTTGCAGAACAGAACTTTCC+AGG | - | chr7_1:3068275-3068294 | None:intergenic | 45.0% | |
| CTATTGGCAGACTCAACTGA+AGG | - | chr7_1:3068467-3068486 | None:intergenic | 45.0% | |
| CTTCAGTTGAGTCTGCCAAT+AGG | + | chr7_1:3068465-3068484 | Msa1005410:CDS | 45.0% | |
| AACCTCAAACTGGGTCCTAT+TGG | - | chr7_1:3068483-3068502 | None:intergenic | 45.0% | |
| TTCTCCCTGAACCTCAAACT+GGG | - | chr7_1:3068492-3068511 | None:intergenic | 45.0% | |
| TTTCTCCCTGAACCTCAAAC+TGG | - | chr7_1:3068493-3068512 | None:intergenic | 45.0% | |
| ! | TGCATTCGGTGATTCTGAGG+AGG | + | chr7_1:3065953-3065972 | Msa1005410:intron | 50.0% |
| CCTCTAGCGATCTGACTATC+AGG | - | chr7_1:3066373-3066392 | None:intergenic | 50.0% | |
| CCTGATAGTCAGATCGCTAG+AGG | + | chr7_1:3066370-3066389 | Msa1005410:intron | 50.0% | |
| TCTACCCTATCCCACTAGCT+GGG | - | chr7_1:3066517-3066536 | None:intergenic | 50.0% | |
| TTCTACCCTATCCCACTAGC+TGG | - | chr7_1:3066518-3066537 | None:intergenic | 50.0% | |
| ! | TAATCTGGAGTTCGGCTGGA+AGG | + | chr7_1:3066658-3066677 | Msa1005410:intron | 50.0% |
| TGTGTCCTGCGCACATGTTT+CGG | + | chr7_1:3066961-3066980 | Msa1005410:intron | 50.0% | |
| GAACAAAGTCCCGAACGTGT+CGG | - | chr7_1:3067058-3067077 | None:intergenic | 50.0% | |
| TGTCTGTGTCCGTGCTTCAT+AGG | + | chr7_1:3067252-3067271 | Msa1005410:intron | 50.0% | |
| TGCCAATAGGACCCAGTTTG+AGG | + | chr7_1:3068478-3068497 | Msa1005410:CDS | 50.0% | |
| ! | TAGGACCCAGTTTGAGGTTC+AGG | + | chr7_1:3068484-3068503 | Msa1005410:CDS | 50.0% |
| ! | AGGACCCAGTTTGAGGTTCA+GGG | + | chr7_1:3068485-3068504 | Msa1005410:CDS | 50.0% |
| CTGAGGAGGTTGAATCGCAG+CGG | + | chr7_1:3065967-3065986 | Msa1005410:intron | 55.0% | |
| ! | TGAATCGCAGCGGAGGCATA+AGG | + | chr7_1:3065977-3065996 | Msa1005410:intron | 55.0% |
| CCGGCTCCTACTTCCTAGTT+CGG | - | chr7_1:3066057-3066076 | None:intergenic | 55.0% | |
| CCGAACTAGGAAGTAGGAGC+CGG | + | chr7_1:3066054-3066073 | Msa1005410:intron | 55.0% | |
| CGAACTAGGAAGTAGGAGCC+GGG | + | chr7_1:3066055-3066074 | Msa1005410:intron | 55.0% | |
| AGTCAGATCGCTAGAGGCAG+AGG | + | chr7_1:3066376-3066395 | Msa1005410:intron | 55.0% | |
| ATGTAGCCAACCCCAGCTAG+TGG | + | chr7_1:3066503-3066522 | Msa1005410:intron | 55.0% | |
| TGTAGCCAACCCCAGCTAGT+GGG | + | chr7_1:3066504-3066523 | Msa1005410:intron | 55.0% | |
| CAACCCCAGCTAGTGGGATA+GGG | + | chr7_1:3066510-3066529 | Msa1005410:intron | 55.0% | |
| CTACCCTATCCCACTAGCTG+GGG | - | chr7_1:3066516-3066535 | None:intergenic | 55.0% | |
| AAACCCTACCCCACTAGGTG+GGG | - | chr7_1:3066572-3066591 | None:intergenic | 55.0% | |
| CAAACCCTACCCCACTAGGT+GGG | - | chr7_1:3066573-3066592 | None:intergenic | 55.0% | |
| CAACCAAACCCTACCCCACT+AGG | - | chr7_1:3066577-3066596 | None:intergenic | 55.0% | |
| GGGGAGAGATTGTTTCAGCC+AGG | + | chr7_1:3066693-3066712 | Msa1005410:intron | 55.0% | |
| AGTGTCCGAAACATGTGCGC+AGG | - | chr7_1:3066969-3066988 | None:intergenic | 55.0% | |
| CTACGGGACCATCATGAGCT+TGG | - | chr7_1:3067861-3067880 | None:intergenic | 55.0% | |
| GCTCATGATGGTCCCGTAGA+AGG | + | chr7_1:3067862-3067881 | Msa1005410:CDS | 55.0% | |
| AGGAGGTTGAATCGCAGCGG+AGG | + | chr7_1:3065970-3065989 | Msa1005410:intron | 60.0% | |
| CCTATCCCACTAGCTGGGGT+TGG | - | chr7_1:3066512-3066531 | None:intergenic | 60.0% | |
| CCAACCCCAGCTAGTGGGAT+AGG | + | chr7_1:3066509-3066528 | Msa1005410:intron | 60.0% | |
| ATGTAGCCGACCCCACCTAG+TGG | + | chr7_1:3066559-3066578 | Msa1005410:intron | 60.0% | |
| TGTAGCCGACCCCACCTAGT+GGG | + | chr7_1:3066560-3066579 | Msa1005410:intron | 60.0% | |
| CCAAACCCTACCCCACTAGG+TGG | - | chr7_1:3066574-3066593 | None:intergenic | 60.0% | |
| CCACCTAGTGGGGTAGGGTT+TGG | + | chr7_1:3066571-3066590 | Msa1005410:intron | 60.0% | |
| ! | CGCAGCGGAGGCATAAGGTG+TGG | + | chr7_1:3065982-3066001 | Msa1005410:intron | 65.0% |
| GTAGGAGCCGGGCAGTTTGC+TGG | + | chr7_1:3066066-3066085 | Msa1005410:intron | 65.0% | |
| GTAGCCGACCCCACCTAGTG+GGG | + | chr7_1:3066561-3066580 | Msa1005410:intron | 65.0% | |
| CCTACCCCACTAGGTGGGGT+CGG | - | chr7_1:3066568-3066587 | None:intergenic | 65.0% | |
| CGACCCCACCTAGTGGGGTA+GGG | + | chr7_1:3066566-3066585 | Msa1005410:intron | 65.0% | |
| CCGACCCCACCTAGTGGGGT+AGG | + | chr7_1:3066565-3066584 | Msa1005410:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 3065294 | 3068586 | 3065294 | ID=Msa1005410;Name=Msa1005410 |
| chr7_1 | mRNA | 3065294 | 3068586 | 3065294 | ID=Msa1005410-mRNA-1;Parent=Msa1005410;Name=Msa1005410-mRNA-1;_AED=0.43;_eAED=0.44;_QI=0|0.16|0.14|0.71|1|1|7|54|382 |
| chr7_1 | exon | 3065294 | 3065297 | 3065294 | ID=Msa1005410-mRNA-1:exon:1301;Parent=Msa1005410-mRNA-1 |
| chr7_1 | exon | 3065631 | 3065836 | 3065631 | ID=Msa1005410-mRNA-1:exon:1302;Parent=Msa1005410-mRNA-1 |
| chr7_1 | exon | 3065867 | 3065960 | 3065867 | ID=Msa1005410-mRNA-1:exon:1303;Parent=Msa1005410-mRNA-1 |
| chr7_1 | exon | 3066828 | 3066912 | 3066828 | ID=Msa1005410-mRNA-1:exon:1304;Parent=Msa1005410-mRNA-1 |
| chr7_1 | exon | 3067451 | 3067678 | 3067451 | ID=Msa1005410-mRNA-1:exon:1305;Parent=Msa1005410-mRNA-1 |
| chr7_1 | exon | 3067801 | 3067904 | 3067801 | ID=Msa1005410-mRNA-1:exon:1306;Parent=Msa1005410-mRNA-1 |
| chr7_1 | exon | 3068105 | 3068586 | 3068105 | ID=Msa1005410-mRNA-1:exon:1307;Parent=Msa1005410-mRNA-1 |
| chr7_1 | CDS | 3065294 | 3065297 | 3065294 | ID=Msa1005410-mRNA-1:cds;Parent=Msa1005410-mRNA-1 |
| chr7_1 | CDS | 3065631 | 3065836 | 3065631 | ID=Msa1005410-mRNA-1:cds;Parent=Msa1005410-mRNA-1 |
| chr7_1 | CDS | 3065867 | 3065960 | 3065867 | ID=Msa1005410-mRNA-1:cds;Parent=Msa1005410-mRNA-1 |
| chr7_1 | CDS | 3066828 | 3066912 | 3066828 | ID=Msa1005410-mRNA-1:cds;Parent=Msa1005410-mRNA-1 |
| chr7_1 | CDS | 3067451 | 3067678 | 3067451 | ID=Msa1005410-mRNA-1:cds;Parent=Msa1005410-mRNA-1 |
| chr7_1 | CDS | 3067801 | 3067904 | 3067801 | ID=Msa1005410-mRNA-1:cds;Parent=Msa1005410-mRNA-1 |
| chr7_1 | CDS | 3068105 | 3068532 | 3068105 | ID=Msa1005410-mRNA-1:cds;Parent=Msa1005410-mRNA-1 |
| chr7_1 | three_prime_UTR | 3068533 | 3068586 | 3068533 | ID=Msa1005410-mRNA-1:three_prime_utr;Parent=Msa1005410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
