AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0599580


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0599580 MtrunA17_Chr4g0024171 100.000 113 0 0 1 113 1 113 1.24e-81 234
Msa0599580 MtrunA17_Chr2g0319561 87.719 114 13 1 1 113 1 114 2.90e-72 210
Msa0599580 MtrunA17_Chr3g0098971 71.681 113 31 1 1 113 1 112 4.46e-58 174
Msa0599580 MtrunA17_Chr5g0444201 72.477 109 29 1 5 113 3 110 2.45e-56 170
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0599580 AT4G27130.1 85.841 113 16 0 1 113 1 113 2.47e-72 211
Msa0599580 AT5G54760.2 84.956 113 17 0 1 113 1 113 1.37e-71 209
Msa0599580 AT5G54760.4 84.956 113 17 0 1 113 1 113 1.37e-71 209
Msa0599580 AT5G54760.3 84.956 113 17 0 1 113 1 113 1.37e-71 209
Msa0599580 AT5G54760.1 84.956 113 17 0 1 113 1 113 1.37e-71 209
Msa0599580 AT1G54290.1 84.956 113 17 0 1 113 1 113 2.76e-71 208
Msa0599580 AT5G54940.1 69.912 113 33 1 1 113 1 112 9.14e-57 171
Msa0599580 AT5G54940.3 69.912 113 33 1 1 113 1 112 9.14e-57 171
Msa0599580 AT5G54940.2 69.912 113 33 1 1 113 1 112 9.14e-57 171

Find 62 sgRNAs with CRISPR-Local

Find 322 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAATATATTCTACATATTT+TGG 0.128875 4_2:-39403583 Msa0599580:three_prime_UTR
ATTGAAGGTATCTGTCTTAT+AGG 0.215172 4_2:+39403522 None:intergenic
TCCTTGAAATGCACAACTTT+TGG 0.299242 4_2:-39403448 Msa0599580:three_prime_UTR
CGAAGTAAACAATTAAATCT+TGG 0.316551 4_2:+39403412 None:intergenic
ACAAACATCCCAACAACTTA+TGG 0.331204 4_2:-39404879 Msa0599580:intron
GATGCAGGTCATACAACTTC+AGG 0.332840 4_2:-39403899 Msa0599580:intron
TCTTCCTCTTCCCAAGAATC+AGG 0.342164 4_2:-39408226 Msa0599580:intron
TGTATTTATAGTGGGAGAAT+TGG 0.350831 4_2:+39408336 None:intergenic
AAGGAGAAAATCAAGCTTCA+TGG 0.369453 4_2:-39403731 Msa0599580:CDS
GGGTGTATGTGAGAGAAAAT+TGG 0.376687 4_2:+39408283 None:intergenic
TACAGCAGAACTCTTTCTTC+AGG 0.386347 4_2:+39404632 None:intergenic
GAAGTAAACAATTAAATCTT+GGG 0.391180 4_2:+39403413 None:intergenic
AAAAGCTTAACAACTGTTCA+AGG 0.396107 4_2:-39404694 Msa0599580:CDS
TAGTGATGATACCTGATTCT+TGG 0.402683 4_2:+39408215 None:intergenic
TATTCTTTGCCAGTGCTTAG+TGG 0.415086 4_2:-39404968 Msa0599580:intron
GGTGTATGTGAGAGAAAATT+GGG 0.424354 4_2:+39408284 None:intergenic
GCCAAAAGTTGTGCATTTCA+AGG 0.425538 4_2:+39403447 None:intergenic
ATAAAGCAATCAGGTATGAA+TGG 0.429997 4_2:+39403479 None:intergenic
AATTATGACAAATTTATTGA+AGG 0.432946 4_2:+39403507 None:intergenic
TGTTTCTACTTTCCTTGTGC+AGG 0.434272 4_2:-39403860 Msa0599580:intron
AGTGATGATACCTGATTCTT+GGG 0.439110 4_2:+39408216 None:intergenic
CCACACTCACCATAAGTTGT+TGG 0.440032 4_2:+39404870 None:intergenic
AATGCTGAGGACTCAGGTGC+CGG 0.443828 4_2:-39404763 Msa0599580:CDS
CACACTCACCATAAGTTGTT+GGG 0.453616 4_2:+39404871 None:intergenic
AAGAAAGAGTTCTGCTGTAA+TGG 0.461657 4_2:-39404628 Msa0599580:CDS
CAAGCTTCATGGTTTCTAAG+AGG 0.476703 4_2:-39403720 Msa0599580:exon
TGAGGACCCTGAGTTGGGAC+AGG 0.481367 4_2:-39404596 Msa0599580:intron
GTATTTGCTAGGTTATGATA+AGG 0.491807 4_2:-39403556 Msa0599580:three_prime_UTR
ACACAAAACATAAAGCAATC+AGG 0.496390 4_2:+39403470 None:intergenic
AGACAAACCTGTCCCAACTC+AGG 0.502754 4_2:+39404589 None:intergenic
TAAAGCAATCAGGTATGAAT+GGG 0.503272 4_2:+39403480 None:intergenic
TGAAATGAAATGAAAGTTGA+AGG 0.510464 4_2:+39408262 None:intergenic
ATGCTGAGGACTCAGGTGCC+GGG 0.511820 4_2:-39404762 Msa0599580:CDS
GATACCTGATTCTTGGGAAG+AGG 0.520029 4_2:+39408222 None:intergenic
GTTGTTGAGGACCCTGAGTT+GGG 0.521067 4_2:-39404601 Msa0599580:CDS
TCAGCATTTGCCTCAGCAAA+GGG 0.521093 4_2:+39404778 None:intergenic
CTCAGCATTTGCCTCAGCAA+AGG 0.534120 4_2:+39404777 None:intergenic
TGTTGTTGAGGACCCTGAGT+TGG 0.539383 4_2:-39404602 Msa0599580:CDS
CTGTAATGGTACTGTTGTTG+AGG 0.545164 4_2:-39404614 Msa0599580:CDS
TTCCGTTACGCTGCTGTACA+CGG 0.549366 4_2:+39404719 None:intergenic
ATGCAGGTCATACAACTTCA+GGG 0.552089 4_2:-39403898 Msa0599580:intron
GTCCGTGTACAGCAGCGTAA+CGG 0.553561 4_2:-39404721 Msa0599580:CDS
TCAAACTCAGACATGAAACT+TGG 0.555460 4_2:+39404903 None:intergenic
ATAGCAACATCTTATAGTCA+AGG 0.558803 4_2:-39403613 Msa0599580:three_prime_UTR
GAGGCAAATGCTGAGGACTC+AGG 0.559971 4_2:-39404769 Msa0599580:CDS
GTAGCTAAATTGCACACTGT+TGG 0.564899 4_2:+39403695 None:intergenic
TCAGACATGAAACTTGGCCT+TGG 0.568130 4_2:+39404909 None:intergenic
TAGCAACATCTTATAGTCAA+GGG 0.574169 4_2:-39403612 Msa0599580:three_prime_UTR
TTTAATTGTTTACTTCGTTG+AGG 0.576048 4_2:-39403406 Msa0599580:three_prime_UTR
TAGTGGTTGATTACATCAGA+AGG 0.588836 4_2:-39404951 Msa0599580:five_prime_UTR
TTGATTAGATCCCTTTGCTG+AGG 0.591502 4_2:-39404788 Msa0599580:intron
AAAGCTTAACAACTGTTCAA+GGG 0.593850 4_2:-39404693 Msa0599580:CDS
ACAGGCGGGAATTGTAAAGA+AGG 0.600946 4_2:-39403750 Msa0599580:intron
GACAAACCTGTCCCAACTCA+GGG 0.603811 4_2:+39404590 None:intergenic
GTGTACAGCAGCGTAACGGA+AGG 0.614404 4_2:-39404717 Msa0599580:CDS
TACAACTTCAGGGAGATCAA+AGG 0.622019 4_2:-39403888 Msa0599580:CDS
TAGCTATAGCAAGATACTGA+AGG 0.640038 4_2:-39404656 Msa0599580:CDS
CTTTGCTGAGGCAAATGCTG+AGG 0.642545 4_2:-39404776 Msa0599580:CDS
GAAATGAAATGAAAGTTGAA+GGG 0.643816 4_2:+39408263 None:intergenic
ATGTGAGAGAAAATTGGGAA+CGG 0.651487 4_2:+39408289 None:intergenic
ACATAATGCTTACCTGCACA+AGG 0.656177 4_2:+39403848 None:intergenic
TCATTTATCACAAGTTACCA+AGG 0.661847 4_2:-39404926 Msa0599580:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATTATTATATAGAAAACT+GGG + chr4_2:39403684-39403703 None:intergenic 10.0%
!! TCTATATAATAATTACATTT+AGG - chr4_2:39403689-39403708 Msa0599580:three_prime_UTR 10.0%
!!! ATATATATTAATGATTTGTT+GGG + chr4_2:39403867-39403886 None:intergenic 10.0%
!!! AATATATATTAATGATTTGT+TGG + chr4_2:39403868-39403887 None:intergenic 10.0%
!! CTAAAACTTAATATATTATT+GGG + chr4_2:39405621-39405640 None:intergenic 10.0%
!! ACTAAAACTTAATATATTAT+TGG + chr4_2:39405622-39405641 None:intergenic 10.0%
!!! ATAATATATTAAGTTTTAGT+AGG - chr4_2:39405622-39405641 Msa0599580:intron 10.0%
!! TAAAAATGTTTATAAATGAT+GGG + chr4_2:39407496-39407515 None:intergenic 10.0%
!! TTAAAAATGTTTATAAATGA+TGG + chr4_2:39407497-39407516 None:intergenic 10.0%
!!! ATAATATATTCTACATATTT+TGG - chr4_2:39408138-39408157 Msa0599580:intron 10.0%
!!! TATTTTGTTGTATTTATAGT+GGG + chr4_2:39403396-39403415 None:intergenic 15.0%
!!! TTATTTTGTTGTATTTATAG+TGG + chr4_2:39403397-39403416 None:intergenic 15.0%
!! GTAATTATTATATAGAAAAC+TGG + chr4_2:39403685-39403704 None:intergenic 15.0%
!! TAATTATGATTGAGTTTAAT+TGG + chr4_2:39404076-39404095 None:intergenic 15.0%
!! ATTAAACTCAATCATAATTA+AGG - chr4_2:39404076-39404095 Msa0599580:intron 15.0%
!! TCAAGAAAAAAAAACTTAAA+AGG + chr4_2:39404110-39404129 None:intergenic 15.0%
!!! TAAGTTTTTTTTTCTTGAAT+TGG - chr4_2:39404112-39404131 Msa0599580:intron 15.0%
!!! TTATTTGTTGTATATATAGT+GGG + chr4_2:39404680-39404699 None:intergenic 15.0%
!!! TTTATTTGTTGTATATATAG+TGG + chr4_2:39404681-39404700 None:intergenic 15.0%
!! TTACACAAAAAAATAGATTT+AGG - chr4_2:39404970-39404989 Msa0599580:intron 15.0%
!! TACACAAAAAAATAGATTTA+GGG - chr4_2:39404971-39404990 Msa0599580:intron 15.0%
!!! TTCTTGAATATTTTTGTTTT+TGG - chr4_2:39405205-39405224 Msa0599580:intron 15.0%
!!! TCTTGAATATTTTTGTTTTT+GGG - chr4_2:39405206-39405225 Msa0599580:intron 15.0%
!!! ATTATTCTTTTATTGTTGTT+TGG - chr4_2:39405574-39405593 Msa0599580:intron 15.0%
!!! TTATTCTTTTATTGTTGTTT+GGG - chr4_2:39405575-39405594 Msa0599580:intron 15.0%
!!! AACAAATTTTTAATATACAG+AGG + chr4_2:39406352-39406371 None:intergenic 15.0%
!!! ATCATTTTATTTACAATCAA+AGG - chr4_2:39407194-39407213 Msa0599580:intron 15.0%
!!! TCATTTTATTTACAATCAAA+GGG - chr4_2:39407195-39407214 Msa0599580:intron 15.0%
!!! GATTTTTACCATAAAATAAA+TGG + chr4_2:39407385-39407404 None:intergenic 15.0%
!!! AAATCTTAGTCTTATAATTT+AGG - chr4_2:39407426-39407445 Msa0599580:intron 15.0%
!! AATTATGACAAATTTATTGA+AGG + chr4_2:39408217-39408236 None:intergenic 15.0%
!! TTGTGAGAAAAATTGAAATT+TGG - chr4_2:39403779-39403798 Msa0599580:intron 20.0%
!! TGTGAGAAAAATTGAAATTT+GGG - chr4_2:39403780-39403799 Msa0599580:intron 20.0%
!!! GAGCATTTTATGTTAAATAT+TGG - chr4_2:39404342-39404361 Msa0599580:intron 20.0%
!!! TATTTGTTGTATATATAGTG+GGG + chr4_2:39404679-39404698 None:intergenic 20.0%
!! TTAAAGTTACAAACTTGATT+AGG + chr4_2:39404873-39404892 None:intergenic 20.0%
!! CAACATAAAAAGAAAAAACT+GGG + chr4_2:39404932-39404951 None:intergenic 20.0%
!!! AATATTTTTGTTTTTGGGTT+TGG - chr4_2:39405211-39405230 Msa0599580:intron 20.0%
!!! ATATTTTTGTTTTTGGGTTT+GGG - chr4_2:39405212-39405231 Msa0599580:intron 20.0%
!! ACTTTGATGTTCATTAAAAT+GGG + chr4_2:39405311-39405330 None:intergenic 20.0%
!! AACTTTGATGTTCATTAAAA+TGG + chr4_2:39405312-39405331 None:intergenic 20.0%
!! AAAGAATAATACTAATGAGT+CGG + chr4_2:39405564-39405583 None:intergenic 20.0%
!! TGTTATAAGTATAATTTGAC+TGG + chr4_2:39406005-39406024 None:intergenic 20.0%
!!! TTTTAGAAGTATAATTTGAC+TGG + chr4_2:39406077-39406096 None:intergenic 20.0%
!!! CTAAAAGCATAACATATTTT+TGG - chr4_2:39406091-39406110 Msa0599580:intron 20.0%
!! TTAAGTTAATGATTTATGAG+TGG - chr4_2:39407336-39407355 Msa0599580:intron 20.0%
!!! AGTATCTTAAGTTATTTCTT+AGG + chr4_2:39407578-39407597 None:intergenic 20.0%
!! AATGAGAAGAAATTATGTAT+AGG + chr4_2:39407768-39407787 None:intergenic 20.0%
!! TCCATAAAAAATAGACAATT+AGG + chr4_2:39407804-39407823 None:intergenic 20.0%
!! CCATTAAATAATAGAACATT+AGG + chr4_2:39407916-39407935 None:intergenic 20.0%
!! CCTAATGTTCTATTATTTAA+TGG - chr4_2:39407913-39407932 Msa0599580:intron 20.0%
!!! ATATTCTACATATTTTGGAT+CGG - chr4_2:39408143-39408162 Msa0599580:intron 20.0%
!! GAAGTAAACAATTAAATCTT+GGG + chr4_2:39408311-39408330 None:intergenic 20.0%
! GAAATGAAATGAAAGTTGAA+GGG + chr4_2:39403461-39403480 None:intergenic 25.0%
! TGAAATGAAATGAAAGTTGA+AGG + chr4_2:39403462-39403481 None:intergenic 25.0%
! AAAAATTGAAATTTGGGTGA+AGG - chr4_2:39403786-39403805 Msa0599580:intron 25.0%
!!! ATTTAATTTGTATGCATCGA+CGG - chr4_2:39403908-39403927 Msa0599580:intron 25.0%
! TCTTTGGTTAAATGATCAAA+CGG - chr4_2:39404295-39404314 Msa0599580:intron 25.0%
!! TGAAAAATCATTTGCTGATT+AGG - chr4_2:39404478-39404497 Msa0599580:intron 25.0%
!! GTTAGGAATCTAATTTTTAC+AGG + chr4_2:39404615-39404634 None:intergenic 25.0%
! ATAAGTAACAAAGAAACAAG+AGG + chr4_2:39404766-39404785 None:intergenic 25.0%
! CCAACATAAAAAGAAAAAAC+TGG + chr4_2:39404933-39404952 None:intergenic 25.0%
!!! CCAGTTTTTTCTTTTTATGT+TGG - chr4_2:39404930-39404949 Msa0599580:five_prime_UTR 25.0%
! ACAAGGAAATCATGAAAATA+AGG + chr4_2:39405259-39405278 None:intergenic 25.0%
! GCATGATCTTTCAATTTAAA+TGG + chr4_2:39405382-39405401 None:intergenic 25.0%
! AAGAATAATACTAATGAGTC+GGG + chr4_2:39405563-39405582 None:intergenic 25.0%
! CCAAATAATTACCTATGTTA+GGG + chr4_2:39405672-39405691 None:intergenic 25.0%
! CCTAACATAGGTAATTATTT+GGG - chr4_2:39405670-39405689 Msa0599580:intron 25.0%
! ATTATACAATGATGCACAAT+TGG + chr4_2:39405938-39405957 None:intergenic 25.0%
! ATAAGTATAATTTGACTGGT+AGG + chr4_2:39406001-39406020 None:intergenic 25.0%
! TGATATATGTAAAGACAATG+AGG - chr4_2:39406126-39406145 Msa0599580:intron 25.0%
! GATATATGTAAAGACAATGA+GGG - chr4_2:39406127-39406146 Msa0599580:intron 25.0%
!! TGCTATTGAGTTTATGATTT+TGG - chr4_2:39406167-39406186 Msa0599580:intron 25.0%
! CAATTGCACTACAAAAAAAT+AGG + chr4_2:39406388-39406407 None:intergenic 25.0%
! CAATTGCACTTCAAAAAATT+AGG + chr4_2:39406511-39406530 None:intergenic 25.0%
! AATTTGCATATATATGCACT+GGG + chr4_2:39406657-39406676 None:intergenic 25.0%
!! ACAGATATAGAAATGTCTTT+TGG - chr4_2:39406699-39406718 Msa0599580:intron 25.0%
! TATCAAATATACTCAAGTCA+GGG + chr4_2:39406735-39406754 None:intergenic 25.0%
! ATATCAAATATACTCAAGTC+AGG + chr4_2:39406736-39406755 None:intergenic 25.0%
! AAAGGAGATAAAAATTCCAT+TGG + chr4_2:39407230-39407249 None:intergenic 25.0%
! AAAATAAATGGTTCATCTCA+CGG + chr4_2:39407373-39407392 None:intergenic 25.0%
!!! GAGATGAACCATTTATTTTA+TGG - chr4_2:39407374-39407393 Msa0599580:intron 25.0%
! CTTGAATATTGAAATCAACT+TGG - chr4_2:39407676-39407695 Msa0599580:intron 25.0%
!!! GCCTAATTGTCTATTTTTTA+TGG - chr4_2:39407800-39407819 Msa0599580:intron 25.0%
! ACATTAGGTACATTATAATC+AGG + chr4_2:39407901-39407920 None:intergenic 25.0%
!! TTTTCTATGATGTTTGTAAC+AGG - chr4_2:39407953-39407972 Msa0599580:intron 25.0%
! CGAAGTAAACAATTAAATCT+TGG + chr4_2:39408312-39408331 None:intergenic 25.0%
! TTTAATTGTTTACTTCGTTG+AGG - chr4_2:39408315-39408334 Msa0599580:five_prime_UTR 25.0%
! TGTATTTATAGTGGGAGAAT+TGG + chr4_2:39403388-39403407 None:intergenic 30.0%
GAAAATCATCGTTCCTAATA+AGG + chr4_2:39403654-39403673 None:intergenic 30.0%
!! TTGTTGTGAATTTGTTGTGT+AGG - chr4_2:39403834-39403853 Msa0599580:intron 30.0%
GTTTAATTGGTATACACTGA+TGG + chr4_2:39404063-39404082 None:intergenic 30.0%
ATGAGTTTGAATCCAACTTT+GGG + chr4_2:39404229-39404248 None:intergenic 30.0%
TCATTTAACCAAAGAGAACT+TGG + chr4_2:39404290-39404309 None:intergenic 30.0%
CTTTGGTTAAATGATCAAAC+GGG - chr4_2:39404296-39404315 Msa0599580:intron 30.0%
AGTAGATGCTTGAGTATATT+TGG - chr4_2:39404407-39404426 Msa0599580:intron 30.0%
TACAGGTAAACGATCAAATT+GGG + chr4_2:39404598-39404617 None:intergenic 30.0%
TTACAGGTAAACGATCAAAT+TGG + chr4_2:39404599-39404618 None:intergenic 30.0%
AACTTTAATCCGATTCTGAT+TGG - chr4_2:39404885-39404904 Msa0599580:CDS 30.0%
ACTTTAATCCGATTCTGATT+GGG - chr4_2:39404886-39404905 Msa0599580:CDS 30.0%
! TTCTTTGTGGTCAATTTGTT+GGG - chr4_2:39405151-39405170 Msa0599580:intron 30.0%
!! TACTGCGATTTTAACAACAA+TGG + chr4_2:39405352-39405371 None:intergenic 30.0%
TAGTGAAATGTCAAAGAAGA+AGG - chr4_2:39405440-39405459 Msa0599580:intron 30.0%
TTTCATTTCTGTTGTGAGAA+GGG - chr4_2:39405520-39405539 Msa0599580:intron 30.0%
CCCTAACATAGGTAATTATT+TGG - chr4_2:39405669-39405688 Msa0599580:intron 30.0%
CCCAAATAATTACCTATGTT+AGG + chr4_2:39405673-39405692 None:intergenic 30.0%
ACATAGGTAATTATTTGGGT+AGG - chr4_2:39405674-39405693 Msa0599580:intron 30.0%
ATTGAGATCTTGACTAAGAT+CGG + chr4_2:39405752-39405771 None:intergenic 30.0%
! AGAAGTATAATTTGACTGGT+AGG + chr4_2:39406073-39406092 None:intergenic 30.0%
! TTGAGTTTATGATTTTGGAC+TGG - chr4_2:39406172-39406191 Msa0599580:intron 30.0%
!!! TTTATGATTTTGGACTGGTA+GGG - chr4_2:39406177-39406196 Msa0599580:intron 30.0%
!!! CACAGATTTTTAGTATACAG+AGG + chr4_2:39406476-39406495 None:intergenic 30.0%
! TTTTACCATACAGAGGAAAT+AGG + chr4_2:39406591-39406610 None:intergenic 30.0%
AATTGGACAGCAAAAAACAA+AGG + chr4_2:39406624-39406643 None:intergenic 30.0%
CACTGGGATAATATAACAAT+TGG + chr4_2:39406641-39406660 None:intergenic 30.0%
CAATTTGCATATATATGCAC+TGG + chr4_2:39406658-39406677 None:intergenic 30.0%
TCATTTATCACAAGTTACCA+AGG - chr4_2:39406795-39406814 Msa0599580:intron 30.0%
! ATGAACATATTCTTTTGTCC+CGG + chr4_2:39406980-39406999 None:intergenic 30.0%
AAAAGCTTAACAACTGTTCA+AGG - chr4_2:39407027-39407046 Msa0599580:intron 30.0%
AAAGCTTAACAACTGTTCAA+GGG - chr4_2:39407028-39407047 Msa0599580:intron 30.0%
CAAAGGGAAAAAAAATCCAA+TGG - chr4_2:39407211-39407230 Msa0599580:intron 30.0%
ATGGTAAAAATCATGTTGTG+AGG - chr4_2:39407393-39407412 Msa0599580:intron 30.0%
AAATCATTTCTCATCCAATG+TGG - chr4_2:39407515-39407534 Msa0599580:intron 30.0%
!!! TGTCTATTTTTTATGGATGC+AGG - chr4_2:39407807-39407826 Msa0599580:intron 30.0%
ATAGCAACATCTTATAGTCA+AGG - chr4_2:39408108-39408127 Msa0599580:intron 30.0%
TAGCAACATCTTATAGTCAA+GGG - chr4_2:39408109-39408128 Msa0599580:intron 30.0%
! GTATTTGCTAGGTTATGATA+AGG - chr4_2:39408165-39408184 Msa0599580:intron 30.0%
!! ATTGAAGGTATCTGTCTTAT+AGG + chr4_2:39408202-39408221 None:intergenic 30.0%
TAAAGCAATCAGGTATGAAT+GGG + chr4_2:39408244-39408263 None:intergenic 30.0%
ATAAAGCAATCAGGTATGAA+TGG + chr4_2:39408245-39408264 None:intergenic 30.0%
ACACAAAACATAAAGCAATC+AGG + chr4_2:39408254-39408273 None:intergenic 30.0%
ATGTGAGAGAAAATTGGGAA+CGG + chr4_2:39403435-39403454 None:intergenic 35.0%
GGTGTATGTGAGAGAAAATT+GGG + chr4_2:39403440-39403459 None:intergenic 35.0%
AGTGATGATACCTGATTCTT+GGG + chr4_2:39403508-39403527 None:intergenic 35.0%
TAGTGATGATACCTGATTCT+TGG + chr4_2:39403509-39403528 None:intergenic 35.0%
TTGATACGAATTCGAGAGAA+AGG + chr4_2:39403596-39403615 None:intergenic 35.0%
TTTCTCTCGAATTCGTATCA+AGG - chr4_2:39403595-39403614 Msa0599580:three_prime_UTR 35.0%
ACTTTATCCCGATCCTTATT+AGG - chr4_2:39403638-39403657 Msa0599580:three_prime_UTR 35.0%
TCATCGTTCCTAATAAGGAT+CGG + chr4_2:39403649-39403668 None:intergenic 35.0%
!! GCACTATAAAGTGATTTGGT+TGG + chr4_2:39403958-39403977 None:intergenic 35.0%
AGTGGCACTATAAAGTGATT+TGG + chr4_2:39403962-39403981 None:intergenic 35.0%
!!! CTTTATAGTGCCACTTTTGT+AGG - chr4_2:39403967-39403986 Msa0599580:intron 35.0%
TAAGAGCTATCCTACAAAAG+TGG + chr4_2:39403980-39403999 None:intergenic 35.0%
ATCTATGCATTTACACGCAA+AGG + chr4_2:39404141-39404160 None:intergenic 35.0%
!! TTTGAATCCAACTTTGGGAT+TGG + chr4_2:39404224-39404243 None:intergenic 35.0%
CATGAGTTTGAATCCAACTT+TGG + chr4_2:39404230-39404249 None:intergenic 35.0%
TGGATTCAAACTCATGACTT+TGG - chr4_2:39404234-39404253 Msa0599580:intron 35.0%
ACTCATGACTTTGGTTAAGA+TGG - chr4_2:39404243-39404262 Msa0599580:intron 35.0%
! TTGTTGTATATATAGTGGGG+AGG + chr4_2:39404676-39404695 None:intergenic 35.0%
CTTTAATCCGATTCTGATTG+GGG - chr4_2:39404887-39404906 Msa0599580:CDS 35.0%
GGGATTTGAAGATTATTCTC+AGG - chr4_2:39404991-39405010 Msa0599580:intron 35.0%
CTCATTTCTTTAGCCTCTTT+AGG - chr4_2:39405101-39405120 Msa0599580:intron 35.0%
CTTCTTTGTGGTCAATTTGT+TGG - chr4_2:39405150-39405169 Msa0599580:intron 35.0%
!!! TTTGTTTTTGGGTTTGGGTT+TGG - chr4_2:39405217-39405236 Msa0599580:intron 35.0%
TCAAGCTTGCGTAAAATCAT+GGG + chr4_2:39405408-39405427 None:intergenic 35.0%
GAAATGTCAAAGAAGAAGGA+TGG - chr4_2:39405444-39405463 Msa0599580:intron 35.0%
GTTTCATTTCTGTTGTGAGA+AGG - chr4_2:39405519-39405538 Msa0599580:intron 35.0%
TTAGTAGGATCTTACGATCT+TGG - chr4_2:39405637-39405656 Msa0599580:intron 35.0%
CAACACATATGATCACAACT+AGG + chr4_2:39405710-39405729 None:intergenic 35.0%
TTGAGATCTTGACTAAGATC+GGG + chr4_2:39405751-39405770 None:intergenic 35.0%
!!! GTTTATGATTTTGGACTGGT+AGG - chr4_2:39406176-39406195 Msa0599580:intron 35.0%
!!! CACAGTTTTTTACCATACAG+AGG + chr4_2:39406598-39406617 None:intergenic 35.0%
TAGTGGTTGATTACATCAGA+AGG - chr4_2:39406770-39406789 Msa0599580:intron 35.0%
TCAAACTCAGACATGAAACT+TGG + chr4_2:39406821-39406840 None:intergenic 35.0%
ACAAACATCCCAACAACTTA+TGG - chr4_2:39406842-39406861 Msa0599580:intron 35.0%
TAGCTATAGCAAGATACTGA+AGG - chr4_2:39407065-39407084 Msa0599580:intron 35.0%
AAGAAAGAGTTCTGCTGTAA+TGG - chr4_2:39407093-39407112 Msa0599580:intron 35.0%
! GAATTTTTATCTCCTTTCCC+TGG - chr4_2:39407233-39407252 Msa0599580:intron 35.0%
TGTGATTCAATGTGTGTGTT+TGG - chr4_2:39407276-39407295 Msa0599580:intron 35.0%
!! AATGTGTGTGTTTGGTTCTA+TGG - chr4_2:39407284-39407303 Msa0599580:intron 35.0%
TACATGTTAAGAGTCCACAT+TGG + chr4_2:39407532-39407551 None:intergenic 35.0%
!! GCATGTTTGGATTCACTTTT+GGG + chr4_2:39407727-39407746 None:intergenic 35.0%
! TGCATGTTTGGATTCACTTT+TGG + chr4_2:39407728-39407747 None:intergenic 35.0%
! GAATCCAAACATGCATTGAT+TGG - chr4_2:39407733-39407752 Msa0599580:intron 35.0%
TCTATGATGTTTGTAACAGG+CGG - chr4_2:39407956-39407975 Msa0599580:intron 35.0%
AAGGAGAAAATCAAGCTTCA+TGG - chr4_2:39407990-39408009 Msa0599580:intron 35.0%
! ATTTTGGATCGGTATTTGCT+AGG - chr4_2:39408154-39408173 Msa0599580:intron 35.0%
! TCCTTGAAATGCACAACTTT+TGG - chr4_2:39408273-39408292 Msa0599580:five_prime_UTR 35.0%
GGGTGTATGTGAGAGAAAAT+TGG + chr4_2:39403441-39403460 None:intergenic 40.0%
CATCGTTCCTAATAAGGATC+GGG + chr4_2:39403648-39403667 None:intergenic 40.0%
TGAAATTTGGGTGAAGGAAG+TGG - chr4_2:39403792-39403811 Msa0599580:intron 40.0%
AGAACTTGGATGAGATGGTA+AGG + chr4_2:39404276-39404295 None:intergenic 40.0%
CAAAGAGAACTTGGATGAGA+TGG + chr4_2:39404281-39404300 None:intergenic 40.0%
CATCTCATCCAAGTTCTCTT+TGG - chr4_2:39404279-39404298 Msa0599580:intron 40.0%
AGATTCCTAACCAATCTGTG+TGG - chr4_2:39404624-39404643 Msa0599580:CDS 40.0%
ATTATCCCAACCACACAGAT+TGG + chr4_2:39404637-39404656 None:intergenic 40.0%
! TATATATAGTGGGGAGGATC+GGG + chr4_2:39404670-39404689 None:intergenic 40.0%
! GTATATATAGTGGGGAGGAT+CGG + chr4_2:39404671-39404690 None:intergenic 40.0%
TCTTTAGCCTCTTTAGGTGA+AGG - chr4_2:39405107-39405126 Msa0599580:intron 40.0%
GGTGAATCATGTCTTCTTTG+TGG - chr4_2:39405138-39405157 Msa0599580:intron 40.0%
ATCGCGACAACAAATCTACA+AGG + chr4_2:39405276-39405295 None:intergenic 40.0%
GTCAAGCTTGCGTAAAATCA+TGG + chr4_2:39405409-39405428 None:intergenic 40.0%
! TTCTGTTGTGAGAAGGGTAT+TGG - chr4_2:39405526-39405545 Msa0599580:intron 40.0%
!! TCTGTTGTGAGAAGGGTATT+GGG - chr4_2:39405527-39405546 Msa0599580:intron 40.0%
GCTAGTCACTATATCACTGT+TGG + chr4_2:39405791-39405810 None:intergenic 40.0%
AGTGATATAGTGACTAGCGA+GGG - chr4_2:39405793-39405812 Msa0599580:intron 40.0%
ACTGAGACCATGAAGTTGAA+GGG - chr4_2:39405876-39405895 Msa0599580:intron 40.0%
TTGACTGGTAGGATTGAACA+CGG + chr4_2:39405990-39406009 None:intergenic 40.0%
ACTCTTCCATAACAGAAGGT+CGG + chr4_2:39406224-39406243 None:intergenic 40.0%
CTAGACTCTTCCATAACAGA+AGG + chr4_2:39406228-39406247 None:intergenic 40.0%
! GTTATGGAAGAGTCTAGAAC+AGG - chr4_2:39406231-39406250 Msa0599580:intron 40.0%
TACTGCCTATTTCCTCTGTA+TGG - chr4_2:39406583-39406602 Msa0599580:intron 40.0%
TATTCTTTGCCAGTGCTTAG+TGG - chr4_2:39406753-39406772 Msa0599580:intron 40.0%
TGTAATCAACCACTAAGCAC+TGG + chr4_2:39406765-39406784 None:intergenic 40.0%
CACACTCACCATAAGTTGTT+GGG + chr4_2:39406853-39406872 None:intergenic 40.0%
TGGTGAGTGTGGAATTTCTT+AGG - chr4_2:39406862-39406881 Msa0599580:intron 40.0%
TTTAGCATTCGTTGCTGATG+TGG - chr4_2:39406902-39406921 Msa0599580:intron 40.0%
TTGATTAGATCCCTTTGCTG+AGG - chr4_2:39406933-39406952 Msa0599580:intron 40.0%
TACAGCAGAACTCTTTCTTC+AGG + chr4_2:39407092-39407111 None:intergenic 40.0%
CTGTAATGGTACTGTTGTTG+AGG - chr4_2:39407107-39407126 Msa0599580:intron 40.0%
TTATCTCCTTTCCCTGGATA+TGG - chr4_2:39407239-39407258 Msa0599580:intron 40.0%
AGTGAGAAAGACCATATCCA+GGG + chr4_2:39407253-39407272 None:intergenic 40.0%
! TTGCAAGTCTCTTTTGTAGG+GGG + chr4_2:39407462-39407481 None:intergenic 40.0%
! CTTGCAAGTCTCTTTTGTAG+GGG + chr4_2:39407463-39407482 None:intergenic 40.0%
! CCTTGCAAGTCTCTTTTGTA+GGG + chr4_2:39407464-39407483 None:intergenic 40.0%
! ACCTTGCAAGTCTCTTTTGT+AGG + chr4_2:39407465-39407484 None:intergenic 40.0%
CAAAAGAGACTTGCAAGGTT+AGG - chr4_2:39407466-39407485 Msa0599580:intron 40.0%
! GGCGTCTACAAAATCACTTT+TGG - chr4_2:39407697-39407716 Msa0599580:intron 40.0%
CCATCCAATCAATGCATGTT+TGG + chr4_2:39407740-39407759 None:intergenic 40.0%
!! CCAAACATGCATTGATTGGA+TGG - chr4_2:39407737-39407756 Msa0599580:intron 40.0%
ATGCAGGTCATACAACTTCA+GGG - chr4_2:39407823-39407842 Msa0599580:intron 40.0%
TACAACTTCAGGGAGATCAA+AGG - chr4_2:39407833-39407852 Msa0599580:intron 40.0%
! TGTTTCTACTTTCCTTGTGC+AGG - chr4_2:39407861-39407880 Msa0599580:intron 40.0%
ACATAATGCTTACCTGCACA+AGG + chr4_2:39407876-39407895 None:intergenic 40.0%
CTATGATGTTTGTAACAGGC+GGG - chr4_2:39407957-39407976 Msa0599580:intron 40.0%
CAAGCTTCATGGTTTCTAAG+AGG - chr4_2:39408001-39408020 Msa0599580:intron 40.0%
GTAGCTAAATTGCACACTGT+TGG + chr4_2:39408029-39408048 None:intergenic 40.0%
GCCAAAAGTTGTGCATTTCA+AGG + chr4_2:39408277-39408296 None:intergenic 40.0%
TCTTCCTCTTCCCAAGAATC+AGG - chr4_2:39403495-39403514 Msa0599580:three_prime_UTR 45.0%
GATACCTGATTCTTGGGAAG+AGG + chr4_2:39403502-39403521 None:intergenic 45.0%
ATTTGGGTGAAGGAAGTGGT+TGG - chr4_2:39403796-39403815 Msa0599580:intron 45.0%
ATCAATAACGTGAGCCGAGT+AGG - chr4_2:39404159-39404178 Msa0599580:intron 45.0%
!! CTTAGCTTTGTCACCCATTG+CGG + chr4_2:39404186-39404205 None:intergenic 45.0%
CACTGTTCCAATCCCAAAGT+TGG - chr4_2:39404214-39404233 Msa0599580:intron 45.0%
TCCTAACCAATCTGTGTGGT+TGG - chr4_2:39404628-39404647 Msa0599580:CDS 45.0%
CCTAACCAATCTGTGTGGTT+GGG - chr4_2:39404629-39404648 Msa0599580:CDS 45.0%
TTCTTCCTCCTCGCAAGAAT+CGG - chr4_2:39404721-39404740 Msa0599580:CDS 45.0%
TCCTTGTCCCCAATCAGAAT+CGG + chr4_2:39404897-39404916 None:intergenic 45.0%
ACCACTTCCTTCACCTAAAG+AGG + chr4_2:39405117-39405136 None:intergenic 45.0%
CTTTAGGTGAAGGAAGTGGT+TGG - chr4_2:39405117-39405136 Msa0599580:intron 45.0%
! TTTGGGTTTGGGTTTGGAGT+AGG - chr4_2:39405223-39405242 Msa0599580:intron 45.0%
ATTACCTATGTTAGGGAGCG+AGG + chr4_2:39405665-39405684 None:intergenic 45.0%
AGATCTTGACTAAGATCGGG+AGG + chr4_2:39405748-39405767 None:intergenic 45.0%
CAGTGATATAGTGACTAGCG+AGG - chr4_2:39405792-39405811 Msa0599580:intron 45.0%
GACTGAGACCATGAAGTTGA+AGG - chr4_2:39405875-39405894 Msa0599580:intron 45.0%
CTGAGACCATGAAGTTGAAG+GGG - chr4_2:39405877-39405896 Msa0599580:intron 45.0%
! GTCGGAAGCTTTAACGAACT+AGG + chr4_2:39406206-39406225 None:intergenic 45.0%
AAGCTTCCGACCTTCTGTTA+TGG - chr4_2:39406215-39406234 Msa0599580:intron 45.0%
AGGATTTGACCCACTTACGA+AGG - chr4_2:39406251-39406270 Msa0599580:intron 45.0%
GGATTTGACCCACTTACGAA+GGG - chr4_2:39406252-39406271 Msa0599580:intron 45.0%
GGTCTCTTAAGTTACTGCAG+AGG - chr4_2:39406278-39406297 Msa0599580:intron 45.0%
TCAGACATGAAACTTGGCCT+TGG + chr4_2:39406815-39406834 None:intergenic 45.0%
CCACACTCACCATAAGTTGT+TGG + chr4_2:39406854-39406873 None:intergenic 45.0%
CCAACAACTTATGGTGAGTG+TGG - chr4_2:39406851-39406870 Msa0599580:intron 45.0%
TCAGCATTTGCCTCAGCAAA+GGG + chr4_2:39406946-39406965 None:intergenic 45.0%
GAAAGACCATATCCAGGGAA+AGG + chr4_2:39407248-39407267 None:intergenic 45.0%
GAGTGAGAAAGACCATATCC+AGG + chr4_2:39407254-39407273 None:intergenic 45.0%
! CTTTTGTAGGGGGATGAGTT+AGG + chr4_2:39407452-39407471 None:intergenic 45.0%
CCCTACAAAAGAGACTTGCA+AGG - chr4_2:39407461-39407480 Msa0599580:intron 45.0%
GATGCAGGTCATACAACTTC+AGG - chr4_2:39407822-39407841 Msa0599580:intron 45.0%
ACAGGCGGGAATTGTAAAGA+AGG - chr4_2:39407971-39407990 Msa0599580:intron 45.0%
TTGGATCCCTCTCTACCACT+TGG - chr4_2:39404426-39404445 Msa0599580:intron 50.0%
CCTTGACCAAGTGGTAGAGA+GGG + chr4_2:39404435-39404454 None:intergenic 50.0%
CCTCTCTACCACTTGGTCAA+GGG - chr4_2:39404433-39404452 Msa0599580:intron 50.0%
GAAACGAACCCTTGACCAAG+TGG + chr4_2:39404444-39404463 None:intergenic 50.0%
! CATTTGCTGATTAGGCTCCG+CGG - chr4_2:39404486-39404505 Msa0599580:intron 50.0%
! CCCAACCACACAGATTGGTT+AGG + chr4_2:39404632-39404651 None:intergenic 50.0%
TCTTCCTCCTCGCAAGAATC+GGG - chr4_2:39404722-39404741 Msa0599580:CDS 50.0%
GATGATACCCGATTCTTGCG+AGG + chr4_2:39404732-39404751 None:intergenic 50.0%
TCCGATTCTGATTGGGGACA+AGG - chr4_2:39404893-39404912 Msa0599580:CDS 50.0%
GCCTCTTTAGGTGAAGGAAG+TGG - chr4_2:39405113-39405132 Msa0599580:intron 50.0%
! CTGGAGAGCACGGAAAGTTA+GGG - chr4_2:39405497-39405516 Msa0599580:intron 50.0%
CTTGACTAAGATCGGGAGGT+CGG + chr4_2:39405744-39405763 None:intergenic 50.0%
TAGTGACTAGCGAGGGAATC+AGG - chr4_2:39405800-39405819 Msa0599580:intron 50.0%
TAGCAGCCCCTTCAACTTCA+TGG + chr4_2:39405886-39405905 None:intergenic 50.0%
TTGAAGGGGCTGCTAGAACT+GGG - chr4_2:39405891-39405910 Msa0599580:intron 50.0%
AGACCTAGCCCTTCGTAAGT+GGG + chr4_2:39406263-39406282 None:intergenic 50.0%
ACCTTCTACTGCTTTGCGAG+CGG - chr4_2:39406308-39406327 Msa0599580:intron 50.0%
CTCAGCATTTGCCTCAGCAA+AGG + chr4_2:39406947-39406966 None:intergenic 50.0%
CTTTGCTGAGGCAAATGCTG+AGG - chr4_2:39406945-39406964 Msa0599580:intron 50.0%
TTCCGTTACGCTGCTGTACA+CGG + chr4_2:39407005-39407024 None:intergenic 50.0%
TGTTGTTGAGGACCCTGAGT+TGG - chr4_2:39407119-39407138 Msa0599580:intron 50.0%
GTTGTTGAGGACCCTGAGTT+GGG - chr4_2:39407120-39407139 Msa0599580:intron 50.0%
GACAAACCTGTCCCAACTCA+GGG + chr4_2:39407134-39407153 None:intergenic 50.0%
AGACAAACCTGTCCCAACTC+AGG + chr4_2:39407135-39407154 None:intergenic 50.0%
TCACCCATTGCGGTCCTACT+CGG + chr4_2:39404176-39404195 None:intergenic 55.0%
CCCTCTCTACCACTTGGTCA+AGG - chr4_2:39404432-39404451 Msa0599580:intron 55.0%
CCCTTGACCAAGTGGTAGAG+AGG + chr4_2:39404436-39404455 None:intergenic 55.0%
GATACCCGATTCTTGCGAGG+AGG + chr4_2:39404729-39404748 None:intergenic 55.0%
AGAAGGATGGCACAGTCCTG+CGG - chr4_2:39405457-39405476 Msa0599580:intron 55.0%
! GCTGGAGAGCACGGAAAGTT+AGG - chr4_2:39405496-39405515 Msa0599580:intron 55.0%
GGTACCTCGCTCCCTAACAT+AGG - chr4_2:39405658-39405677 Msa0599580:intron 55.0%
GTTGAAGGGGCTGCTAGAAC+TGG - chr4_2:39405890-39405909 Msa0599580:intron 55.0%
TGACCCACTTACGAAGGGCT+AGG - chr4_2:39406257-39406276 Msa0599580:intron 55.0%
GAGACCTAGCCCTTCGTAAG+TGG + chr4_2:39406264-39406283 None:intergenic 55.0%
CCTTCTACTGCTTTGCGAGC+GGG - chr4_2:39406309-39406328 Msa0599580:intron 55.0%
CTTCTACTGCTTTGCGAGCG+GGG - chr4_2:39406310-39406329 Msa0599580:intron 55.0%
TTCTACTGCTTTGCGAGCGG+GGG - chr4_2:39406311-39406330 Msa0599580:intron 55.0%
GAGGCAAATGCTGAGGACTC+AGG - chr4_2:39406952-39406971 Msa0599580:intron 55.0%
AATGCTGAGGACTCAGGTGC+CGG - chr4_2:39406958-39406977 Msa0599580:intron 55.0%
GTCCGTGTACAGCAGCGTAA+CGG - chr4_2:39407000-39407019 Msa0599580:intron 55.0%
! GTGTACAGCAGCGTAACGGA+AGG - chr4_2:39407004-39407023 Msa0599580:intron 55.0%
TGAGCCGAGTAGGACCGCAA+TGG - chr4_2:39404169-39404188 Msa0599580:intron 60.0%
GAGCCGAGTAGGACCGCAAT+GGG - chr4_2:39404170-39404189 Msa0599580:intron 60.0%
AGGTAGGCAGCTGGAGAGCA+CGG - chr4_2:39405487-39405506 Msa0599580:intron 60.0%
AGGGGCTGCTAGAACTGGGA+AGG - chr4_2:39405895-39405914 Msa0599580:intron 60.0%
GCTGCTAGAACTGGGAAGGC+TGG - chr4_2:39405899-39405918 Msa0599580:intron 60.0%
CCCGCTCGCAAAGCAGTAGA+AGG + chr4_2:39406312-39406331 None:intergenic 60.0%
TCTACTGCTTTGCGAGCGGG+GGG - chr4_2:39406312-39406331 Msa0599580:intron 60.0%
ATGCTGAGGACTCAGGTGCC+GGG - chr4_2:39406959-39406978 Msa0599580:intron 60.0%
! TGAGGACCCTGAGTTGGGAC+AGG - chr4_2:39407125-39407144 Msa0599580:intron 60.0%
TAGGCTCCGCGGTTGCGTGT+CGG - chr4_2:39404497-39404516 Msa0599580:intron 65.0%
TCCACACCGACACGCAACCG+CGG + chr4_2:39404506-39404525 None:intergenic 65.0%
GGATGGCACAGTCCTGCGGT+TGG - chr4_2:39405461-39405480 Msa0599580:intron 65.0%
TGGCACAGTCCTGCGGTTGG+TGG - chr4_2:39405464-39405483 Msa0599580:intron 65.0%
!! CACAGTCCTGCGGTTGGTGG+AGG - chr4_2:39405467-39405486 Msa0599580:intron 65.0%
!! GTCCTGCGGTTGGTGGAGGT+AGG - chr4_2:39405471-39405490 Msa0599580:intron 65.0%
TGCCTACCTCCACCAACCGC+AGG + chr4_2:39405476-39405495 None:intergenic 65.0%
!! GGTTGGTGGAGGTAGGCAGC+TGG - chr4_2:39405478-39405497 Msa0599580:intron 65.0%
CTACTGCTTTGCGAGCGGGG+GGG - chr4_2:39406313-39406332 Msa0599580:intron 65.0%
! TCCGCGGTTGCGTGTCGGTG+TGG - chr4_2:39404502-39404521 Msa0599580:intron 70.0%
! GCGGTTGCGTGTCGGTGTGG+AGG - chr4_2:39404505-39404524 Msa0599580:intron 70.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 39403385 39408358 39403385 ID=Msa0599580;Name=Msa0599580
chr4_2 mRNA 39403385 39408358 39403385 ID=Msa0599580-mRNA-1;Parent=Msa0599580;Name=Msa0599580-mRNA-1;_AED=0.04;_eAED=0.04;_QI=193|1|1|1|0.75|0.6|5|339|113
chr4_2 exon 39403385 39403768 39403385 ID=Msa0599580-mRNA-1:exon:8628;Parent=Msa0599580-mRNA-1
chr4_2 exon 39403861 39403914 39403861 ID=Msa0599580-mRNA-1:exon:8627;Parent=Msa0599580-mRNA-1
chr4_2 exon 39404597 39404802 39404597 ID=Msa0599580-mRNA-1:exon:8626;Parent=Msa0599580-mRNA-1
chr4_2 exon 39404880 39404977 39404880 ID=Msa0599580-mRNA-1:exon:8625;Parent=Msa0599580-mRNA-1
chr4_2 exon 39408227 39408358 39408227 ID=Msa0599580-mRNA-1:exon:8624;Parent=Msa0599580-mRNA-1
chr4_2 five_prime_UTR 39408227 39408358 39408227 ID=Msa0599580-mRNA-1:five_prime_utr;Parent=Msa0599580-mRNA-1
chr4_2 five_prime_UTR 39404917 39404977 39404917 ID=Msa0599580-mRNA-1:five_prime_utr;Parent=Msa0599580-mRNA-1
chr4_2 CDS 39404880 39404916 39404880 ID=Msa0599580-mRNA-1:cds;Parent=Msa0599580-mRNA-1
chr4_2 CDS 39404597 39404802 39404597 ID=Msa0599580-mRNA-1:cds;Parent=Msa0599580-mRNA-1
chr4_2 CDS 39403861 39403914 39403861 ID=Msa0599580-mRNA-1:cds;Parent=Msa0599580-mRNA-1
chr4_2 CDS 39403724 39403768 39403724 ID=Msa0599580-mRNA-1:cds;Parent=Msa0599580-mRNA-1
chr4_2 three_prime_UTR 39403385 39403723 39403385 ID=Msa0599580-mRNA-1:three_prime_utr;Parent=Msa0599580-mRNA-1
Gene Sequence

>Msa0599580

ATGTCTGAGTTTGATACAAACATCCCAACAACTTATGATCCCTTTGCTGAGGCAAATGCTGAGGACTCAGGTGCCGGGACAAAAGAATATGTTCATGTCCGTGTACAGCAGCGTAACGGAAGGAAAAGCTTAACAACTGTTCAAGGGTTAAAGAAAGAGTTTAGCTATAGCAAGATACTGAAGGACCTGAAGAAAGAGTTCTGCTGTAATGGTACTGTTGTTGAGGACCCTGAGTTGGGACAGGTCATACAACTTCAGGGAGATCAAAGGAAGAATGTTTCTACTTTCCTTGTGCAGGCGGGAATTGTAAAGAAGGAGAAAATCAAGCTTCATGGTTTCTAA

Protein sequence

>Msa0599580

MSEFDTNIPTTYDPFAEANAEDSGAGTKEYVHVRVQQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVEDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEKIKLHGF*