Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85663.t1 | XP_013461918.1 | 94.9 | 311 | 11 | 1 | 31 | 336 | 30 | 340 | 4.60E-165 | 590.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85663.t1 | A0A072V3M1 | 94.9 | 311 | 11 | 1 | 31 | 336 | 30 | 340 | 3.3e-165 | 590.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene85663 | 0.835254 | 1.87E-56 | -1.69E-46 |
| MS.gene049230 | MS.gene85663 | 0.801531 | 8.62E-49 | -1.69E-46 |
| MS.gene049254 | MS.gene85663 | 0.80743 | 5.07E-50 | -1.69E-46 |
| MS.gene049343 | MS.gene85663 | 0.832475 | 9.26E-56 | -1.69E-46 |
| MS.gene049404 | MS.gene85663 | 0.807346 | 5.29E-50 | -1.69E-46 |
| MS.gene049424 | MS.gene85663 | 0.810835 | 9.46E-51 | -1.69E-46 |
| MS.gene049435 | MS.gene85663 | 0.806598 | 7.61E-50 | -1.69E-46 |
| MS.gene049653 | MS.gene85663 | 0.805821 | 1.11E-49 | -1.69E-46 |
| MS.gene049669 | MS.gene85663 | 0.818023 | 2.43E-52 | -1.69E-46 |
| MS.gene049983 | MS.gene85663 | 0.802708 | 4.94E-49 | -1.69E-46 |
| MS.gene050105 | MS.gene85663 | 0.831714 | 1.43E-55 | -1.69E-46 |
| MS.gene050119 | MS.gene85663 | 0.803835 | 2.88E-49 | -1.69E-46 |
| MS.gene050303 | MS.gene85663 | 0.810696 | 1.01E-50 | -1.69E-46 |
| MS.gene050442 | MS.gene85663 | 0.806194 | 9.26E-50 | -1.69E-46 |
| MS.gene050559 | MS.gene85663 | 0.816071 | 6.68E-52 | -1.69E-46 |
| MS.gene050561 | MS.gene85663 | 0.817598 | 3.04E-52 | -1.69E-46 |
| MS.gene050605 | MS.gene85663 | 0.839203 | 1.82E-57 | -1.69E-46 |
| MS.gene050680 | MS.gene85663 | 0.822653 | 2.11E-53 | -1.69E-46 |
| MS.gene050750 | MS.gene85663 | 0.811375 | 7.23E-51 | -1.69E-46 |
| MS.gene050844 | MS.gene85663 | 0.809791 | 1.59E-50 | -1.69E-46 |
| MS.gene050905 | MS.gene85663 | -0.834738 | 2.52E-56 | -1.69E-46 |
| MS.gene050953 | MS.gene85663 | 0.826656 | 2.41E-54 | -1.69E-46 |
| MS.gene051243 | MS.gene85663 | 0.812373 | 4.38E-51 | -1.69E-46 |
| MS.gene051349 | MS.gene85663 | 0.811487 | 6.83E-51 | -1.69E-46 |
| MS.gene05134 | MS.gene85663 | 0.800166 | 1.64E-48 | -1.69E-46 |
| MS.gene051363 | MS.gene85663 | 0.808089 | 3.68E-50 | -1.69E-46 |
| MS.gene051368 | MS.gene85663 | 0.852185 | 5.45E-61 | -1.69E-46 |
| MS.gene051370 | MS.gene85663 | 0.811962 | 5.38E-51 | -1.69E-46 |
| MS.gene051452 | MS.gene85663 | 0.827254 | 1.73E-54 | -1.69E-46 |
| MS.gene052012 | MS.gene85663 | 0.827923 | 1.20E-54 | -1.69E-46 |
| MS.gene052108 | MS.gene85663 | 0.828279 | 9.82E-55 | -1.69E-46 |
| MS.gene052176 | MS.gene85663 | 0.803979 | 2.69E-49 | -1.69E-46 |
| MS.gene052190 | MS.gene85663 | 0.807842 | 4.15E-50 | -1.69E-46 |
| MS.gene052333 | MS.gene85663 | 0.822678 | 2.08E-53 | -1.69E-46 |
| MS.gene052426 | MS.gene85663 | 0.83938 | 1.64E-57 | -1.69E-46 |
| MS.gene052500 | MS.gene85663 | 0.831877 | 1.30E-55 | -1.69E-46 |
| MS.gene052502 | MS.gene85663 | 0.826305 | 2.92E-54 | -1.69E-46 |
| MS.gene052519 | MS.gene85663 | 0.839253 | 1.77E-57 | -1.69E-46 |
| MS.gene052586 | MS.gene85663 | 0.806266 | 8.94E-50 | -1.69E-46 |
| MS.gene052773 | MS.gene85663 | 0.805386 | 1.37E-49 | -1.69E-46 |
| MS.gene052824 | MS.gene85663 | 0.82111 | 4.81E-53 | -1.69E-46 |
| MS.gene052826 | MS.gene85663 | 0.828954 | 6.75E-55 | -1.69E-46 |
| MS.gene052863 | MS.gene85663 | 0.803526 | 3.34E-49 | -1.69E-46 |
| MS.gene052954 | MS.gene85663 | 0.875677 | 2.55E-68 | -1.69E-46 |
| MS.gene053006 | MS.gene85663 | 0.859416 | 4.20E-63 | -1.69E-46 |
| MS.gene053008 | MS.gene85663 | 0.855719 | 5.22E-62 | -1.69E-46 |
| MS.gene053080 | MS.gene85663 | 0.836932 | 7.00E-57 | -1.69E-46 |
| MS.gene053166 | MS.gene85663 | 0.838967 | 2.10E-57 | -1.69E-46 |
| MS.gene053188 | MS.gene85663 | 0.817885 | 2.61E-52 | -1.69E-46 |
| MS.gene053216 | MS.gene85663 | 0.807181 | 5.73E-50 | -1.69E-46 |
| MS.gene053226 | MS.gene85663 | 0.830442 | 2.93E-55 | -1.69E-46 |
| MS.gene053931 | MS.gene85663 | 0.832263 | 1.04E-55 | -1.69E-46 |
| MS.gene053953 | MS.gene85663 | 0.81006 | 1.39E-50 | -1.69E-46 |
| MS.gene053963 | MS.gene85663 | 0.811774 | 5.92E-51 | -1.69E-46 |
| MS.gene05415 | MS.gene85663 | 0.828099 | 1.09E-54 | -1.69E-46 |
| MS.gene054236 | MS.gene85663 | 0.810559 | 1.09E-50 | -1.69E-46 |
| MS.gene054405 | MS.gene85663 | 0.818794 | 1.63E-52 | -1.69E-46 |
| MS.gene054479 | MS.gene85663 | 0.844297 | 8.25E-59 | -1.69E-46 |
| MS.gene054537 | MS.gene85663 | 0.81527 | 1.01E-51 | -1.69E-46 |
| MS.gene054559 | MS.gene85663 | 0.828482 | 8.78E-55 | -1.69E-46 |
| MS.gene054651 | MS.gene85663 | 0.823859 | 1.10E-53 | -1.69E-46 |
| MS.gene054657 | MS.gene85663 | 0.845741 | 3.36E-59 | -1.69E-46 |
| MS.gene054658 | MS.gene85663 | 0.811766 | 5.94E-51 | -1.69E-46 |
| MS.gene054994 | MS.gene85663 | 0.839752 | 1.31E-57 | -1.69E-46 |
| MS.gene05510 | MS.gene85663 | 0.852933 | 3.33E-61 | -1.69E-46 |
| MS.gene05517 | MS.gene85663 | 0.824784 | 6.69E-54 | -1.69E-46 |
| MS.gene055222 | MS.gene85663 | 0.823028 | 1.73E-53 | -1.69E-46 |
| MS.gene055227 | MS.gene85663 | 0.81664 | 4.98E-52 | -1.69E-46 |
| MS.gene055230 | MS.gene85663 | 0.850393 | 1.75E-60 | -1.69E-46 |
| MS.gene055586 | MS.gene85663 | 0.801846 | 7.42E-49 | -1.69E-46 |
| MS.gene055623 | MS.gene85663 | 0.840593 | 7.92E-58 | -1.69E-46 |
| MS.gene055701 | MS.gene85663 | 0.853213 | 2.77E-61 | -1.69E-46 |
| MS.gene055818 | MS.gene85663 | 0.843665 | 1.22E-58 | -1.69E-46 |
| MS.gene055841 | MS.gene85663 | 0.825592 | 4.31E-54 | -1.69E-46 |
| MS.gene056173 | MS.gene85663 | 0.803619 | 3.20E-49 | -1.69E-46 |
| MS.gene056366 | MS.gene85663 | 0.814179 | 1.76E-51 | -1.69E-46 |
| MS.gene056498 | MS.gene85663 | 0.809454 | 1.88E-50 | -1.69E-46 |
| MS.gene056506 | MS.gene85663 | 0.85771 | 1.36E-62 | -1.69E-46 |
| MS.gene05686 | MS.gene85663 | 0.800615 | 1.33E-48 | -1.69E-46 |
| MS.gene057026 | MS.gene85663 | 0.813661 | 2.29E-51 | -1.69E-46 |
| MS.gene057060 | MS.gene85663 | 0.82211 | 2.82E-53 | -1.69E-46 |
| MS.gene057140 | MS.gene85663 | 0.809629 | 1.72E-50 | -1.69E-46 |
| MS.gene057208 | MS.gene85663 | 0.858352 | 8.74E-63 | -1.69E-46 |
| MS.gene057392 | MS.gene85663 | 0.831759 | 1.39E-55 | -1.69E-46 |
| MS.gene057555 | MS.gene85663 | 0.804519 | 2.08E-49 | -1.69E-46 |
| MS.gene057693 | MS.gene85663 | 0.841274 | 5.25E-58 | -1.69E-46 |
| MS.gene057855 | MS.gene85663 | 0.826825 | 2.19E-54 | -1.69E-46 |
| MS.gene05795 | MS.gene85663 | 0.838815 | 2.30E-57 | -1.69E-46 |
| MS.gene058008 | MS.gene85663 | 0.814199 | 1.74E-51 | -1.69E-46 |
| MS.gene058009 | MS.gene85663 | 0.834117 | 3.61E-56 | -1.69E-46 |
| MS.gene058037 | MS.gene85663 | 0.802071 | 6.67E-49 | -1.69E-46 |
| MS.gene058088 | MS.gene85663 | 0.815471 | 9.09E-52 | -1.69E-46 |
| MS.gene058126 | MS.gene85663 | 0.806229 | 9.10E-50 | -1.69E-46 |
| MS.gene058146 | MS.gene85663 | 0.80903 | 2.31E-50 | -1.69E-46 |
| MS.gene058399 | MS.gene85663 | 0.817038 | 4.06E-52 | -1.69E-46 |
| MS.gene058498 | MS.gene85663 | 0.800379 | 1.48E-48 | -1.69E-46 |
| MS.gene058548 | MS.gene85663 | 0.846092 | 2.70E-59 | -1.69E-46 |
| MS.gene058549 | MS.gene85663 | 0.817361 | 3.43E-52 | -1.69E-46 |
| MS.gene058595 | MS.gene85663 | 0.848264 | 6.85E-60 | -1.69E-46 |
| MS.gene058625 | MS.gene85663 | 0.80904 | 2.30E-50 | -1.69E-46 |
| MS.gene058783 | MS.gene85663 | 0.834783 | 2.45E-56 | -1.69E-46 |
| MS.gene058979 | MS.gene85663 | 0.846421 | 2.20E-59 | -1.69E-46 |
| MS.gene059317 | MS.gene85663 | 0.837335 | 5.52E-57 | -1.69E-46 |
| MS.gene05954 | MS.gene85663 | 0.806935 | 6.46E-50 | -1.69E-46 |
| MS.gene059569 | MS.gene85663 | 0.824912 | 6.24E-54 | -1.69E-46 |
| MS.gene059710 | MS.gene85663 | 0.8159 | 7.29E-52 | -1.69E-46 |
| MS.gene05979 | MS.gene85663 | 0.854263 | 1.38E-61 | -1.69E-46 |
| MS.gene059830 | MS.gene85663 | 0.825296 | 5.07E-54 | -1.69E-46 |
| MS.gene059842 | MS.gene85663 | 0.82971 | 4.42E-55 | -1.69E-46 |
| MS.gene060011 | MS.gene85663 | 0.816186 | 6.30E-52 | -1.69E-46 |
| MS.gene060310 | MS.gene85663 | 0.8254 | 4.79E-54 | -1.69E-46 |
| MS.gene060322 | MS.gene85663 | 0.843898 | 1.06E-58 | -1.69E-46 |
| MS.gene060365 | MS.gene85663 | 0.801223 | 9.96E-49 | -1.69E-46 |
| MS.gene060572 | MS.gene85663 | 0.819323 | 1.23E-52 | -1.69E-46 |
| MS.gene060586 | MS.gene85663 | 0.808122 | 3.62E-50 | -1.69E-46 |
| MS.gene060683 | MS.gene85663 | 0.815006 | 1.15E-51 | -1.69E-46 |
| MS.gene060685 | MS.gene85663 | 0.819454 | 1.15E-52 | -1.69E-46 |
| MS.gene060803 | MS.gene85663 | 0.826442 | 2.71E-54 | -1.69E-46 |
| MS.gene060907 | MS.gene85663 | 0.801827 | 7.49E-49 | -1.69E-46 |
| MS.gene060935 | MS.gene85663 | 0.832089 | 1.15E-55 | -1.69E-46 |
| MS.gene060937 | MS.gene85663 | 0.81252 | 4.07E-51 | -1.69E-46 |
| MS.gene060998 | MS.gene85663 | 0.81046 | 1.14E-50 | -1.69E-46 |
| MS.gene061040 | MS.gene85663 | -0.810923 | 9.05E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85663.t1 | MTR_3g108805 | 94.551 | 312 | 12 | 1 | 31 | 337 | 30 | 341 | 0.0 | 618 |
| MS.gene85663.t1 | MTR_3g108805 | 93.117 | 247 | 12 | 1 | 31 | 272 | 30 | 276 | 6.93e-171 | 479 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85663.t1 | AT5G10710 | 61.538 | 299 | 100 | 5 | 46 | 337 | 1 | 291 | 1.41e-128 | 373 |
| MS.gene85663.t1 | AT5G10710 | 56.856 | 299 | 100 | 6 | 46 | 337 | 1 | 277 | 5.69e-112 | 330 |
| MS.gene85663.t1 | AT5G10710 | 66.234 | 231 | 69 | 4 | 46 | 269 | 1 | 229 | 2.42e-106 | 313 |
Find 73 sgRNAs with CRISPR-Local
Find 421 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCCATCATGTTGAAAAT+TGG | 0.207042 | 3.3:+88918727 | None:intergenic |
| AGACTTATAAAGGAACTTTA+TGG | 0.256795 | 3.3:-88919153 | MS.gene85663:intron |
| ACTTGGCTGACCGTATTTCT+AGG | 0.263651 | 3.3:-88923134 | MS.gene85663:intron |
| ATTAGGACCCGCACTCTTAA+TGG | 0.279494 | 3.3:-88917138 | MS.gene85663:CDS |
| TTATGCAGAAATGATGAATC+TGG | 0.314985 | 3.3:-88916932 | MS.gene85663:CDS |
| GGAGCAGATAATTTGCTGTT+TGG | 0.394698 | 3.3:-88920327 | MS.gene85663:intron |
| TTTGTAGAGATATATTTAGA+TGG | 0.404679 | 3.3:-88922367 | MS.gene85663:intron |
| GAATCTGGGCAAGGTGATAT+CGG | 0.416748 | 3.3:-88916917 | MS.gene85663:CDS |
| GCGATCTTGTCAGGTGCATA+TGG | 0.434706 | 3.3:-88922168 | MS.gene85663:intron |
| CAGAAATTCATTGATCATGT+TGG | 0.434843 | 3.3:-88919911 | MS.gene85663:CDS |
| TGTTTGGAAGGAGCAAGAAT+TGG | 0.441864 | 3.3:-88920311 | MS.gene85663:CDS |
| TTGCTCTCAAATGTGTTCAT+AGG | 0.447944 | 3.3:-88916827 | None:intergenic |
| TCGATACACAGATCTCATTT+CGG | 0.451039 | 3.3:-88918806 | MS.gene85663:CDS |
| GAACTTTATGGAAATCAAAT+CGG | 0.451964 | 3.3:-88919141 | MS.gene85663:CDS |
| TTGTAGAGATATATTTAGAT+GGG | 0.452805 | 3.3:-88922366 | MS.gene85663:intron |
| GCTTAAAAGACATGAAAACT+TGG | 0.457621 | 3.3:-88923151 | MS.gene85663:CDS |
| ATGATGGAAGATGGAATCTC+AGG | 0.459261 | 3.3:-88918715 | MS.gene85663:CDS |
| GTAGAATTTATCTTCGACAT+TGG | 0.467570 | 3.3:+88918751 | None:intergenic |
| CAGATAATTTGCTGTTTGGA+AGG | 0.473656 | 3.3:-88920323 | MS.gene85663:CDS |
| CTTGTTGCGAGAGGGATAAT+CGG | 0.476270 | 3.3:+88923574 | None:intergenic |
| TTCACCTTCTGGTAGACTCA+TGG | 0.476510 | 3.3:+88918642 | None:intergenic |
| ATACGTGGATAGACGGGAAC+AGG | 0.478284 | 3.3:-88919873 | MS.gene85663:intron |
| GATGATCAGAGAAGAGAAGA+AGG | 0.480695 | 3.3:+88923548 | None:intergenic |
| CTCGAATCTCAGTGCTAGCC+TGG | 0.481978 | 3.3:-88918774 | MS.gene85663:CDS |
| GAGAAAGTTACCTAGAAATA+CGG | 0.501508 | 3.3:+88923124 | None:intergenic |
| TAGGATAGTCGAACTGGTGC+AGG | 0.504799 | 3.3:+88918685 | None:intergenic |
| TGGACGGACGTATGCACCCA+TGG | 0.509184 | 3.3:-88923420 | MS.gene85663:CDS |
| GGGATAATCGGCGGAGTGAA+AGG | 0.509209 | 3.3:+88923586 | None:intergenic |
| GACATCACAGCTAAGACAAT+GGG | 0.513946 | 3.3:-88916973 | MS.gene85663:CDS |
| ACAAACTCGATCATGTGATA+AGG | 0.514790 | 3.3:+88919099 | None:intergenic |
| TCTGCGTAGGATAGTCGAAC+TGG | 0.518507 | 3.3:+88918679 | None:intergenic |
| GATGGGGAACAGTGGAATGA+TGG | 0.520649 | 3.3:-88922349 | MS.gene85663:CDS |
| TGCAAGCATACGTGGATAGA+CGG | 0.523288 | 3.3:-88919880 | MS.gene85663:CDS |
| TGACGTATTAACAAGCCATC+AGG | 0.529984 | 3.3:-88922114 | MS.gene85663:CDS |
| ATTTATCTTCGACATTGGCC+AGG | 0.530939 | 3.3:+88918756 | None:intergenic |
| GGACGGACGTATGCACCCAT+GGG | 0.534852 | 3.3:-88923419 | MS.gene85663:CDS |
| CCGCAGTTTGAACAATATGC+TGG | 0.540600 | 3.3:-88923440 | MS.gene85663:intron |
| TGGTAGACTCATGGTTCGTA+AGG | 0.549313 | 3.3:+88918651 | None:intergenic |
| GCAAGATGATGATAGTCGCT+TGG | 0.551967 | 3.3:-88923293 | MS.gene85663:CDS |
| TATGCAGAAATGATGAATCT+GGG | 0.552548 | 3.3:-88916931 | MS.gene85663:CDS |
| AAAATGGAACTGTGTGCTCA+AGG | 0.553374 | 3.3:+88920066 | None:intergenic |
| TGATCTTCCATTAAGAGTGC+GGG | 0.560815 | 3.3:+88917131 | None:intergenic |
| ACTTGCTACAATAAGAGAGC+AGG | 0.563333 | 3.3:-88922323 | MS.gene85663:intron |
| GCAAGCATACGTGGATAGAC+GGG | 0.564586 | 3.3:-88919879 | MS.gene85663:CDS |
| GCTAGCACTGAGATTCGAGT+TGG | 0.570019 | 3.3:+88918778 | None:intergenic |
| GGAAATTGACTCAGAAGTGT+TGG | 0.572349 | 3.3:-88916896 | MS.gene85663:CDS |
| TCGTAAGGCGTCTTCTGCGT+AGG | 0.577738 | 3.3:+88918666 | None:intergenic |
| TGACATCACAGCTAAGACAA+TGG | 0.588269 | 3.3:-88916974 | MS.gene85663:CDS |
| TGTAGAGATATATTTAGATG+GGG | 0.590530 | 3.3:-88922365 | MS.gene85663:intron |
| TATATTTAGATGGGGAACAG+TGG | 0.594269 | 3.3:-88922357 | MS.gene85663:CDS |
| TCTTCTTTCATCCAATGCAA+TGG | 0.597510 | 3.3:-88920015 | MS.gene85663:intron |
| GAAGGGACCTTGTTGCGAGA+GGG | 0.597833 | 3.3:+88923566 | None:intergenic |
| AGATCTATTGCAAGCATACG+TGG | 0.604226 | 3.3:-88919888 | MS.gene85663:CDS |
| AAATGAGATCTGTGTATCGA+AGG | 0.604667 | 3.3:+88918809 | None:intergenic |
| AATTAACAGGGATTCTGACA+AGG | 0.606528 | 3.3:-88923042 | MS.gene85663:intron |
| CTCTTAATGGAAGATCATAC+CGG | 0.606887 | 3.3:-88917125 | MS.gene85663:CDS |
| AGAAGGGACCTTGTTGCGAG+AGG | 0.608665 | 3.3:+88923565 | None:intergenic |
| CGATTATCCCTCTCGCAACA+AGG | 0.618165 | 3.3:-88923573 | MS.gene85663:CDS |
| ATGATCAGAGAAGAGAAGAA+GGG | 0.626425 | 3.3:+88923549 | None:intergenic |
| TACATATAAAACTGGAAACA+AGG | 0.626563 | 3.3:-88922084 | MS.gene85663:intron |
| ACTCGATCATGTGATAAGGA+AGG | 0.628301 | 3.3:+88919103 | None:intergenic |
| ATGATCTTCCATTAAGAGTG+CGG | 0.629251 | 3.3:+88917130 | None:intergenic |
| CGGAGTGAAAGGAATTACTT+CGG | 0.634074 | 3.3:+88923597 | None:intergenic |
| ATCTTGTCAGGTGCATATGG+AGG | 0.639737 | 3.3:-88922165 | MS.gene85663:intron |
| GACGGACGTATGCACCCATG+GGG | 0.641963 | 3.3:-88923418 | MS.gene85663:CDS |
| GCACGAGCTTCTCAAACACA+AGG | 0.674546 | 3.3:-88922984 | MS.gene85663:intron |
| AGTTTGAACAATATGCTGGA+CGG | 0.688660 | 3.3:-88923436 | MS.gene85663:CDS |
| AGAAATGATGAATCTGGGCA+AGG | 0.699393 | 3.3:-88916926 | MS.gene85663:CDS |
| ACTTACTCTCCAGCACGCAG+TGG | 0.705433 | 3.3:+88920111 | None:intergenic |
| GTTGCGAGAGGGATAATCGG+CGG | 0.711505 | 3.3:+88923577 | None:intergenic |
| CGAACCATGAGTCTACCAGA+AGG | 0.717534 | 3.3:-88918646 | MS.gene85663:intron |
| TTAATGGAAGATCATACCGG+TGG | 0.720772 | 3.3:-88917122 | MS.gene85663:intron |
| ACGGACGTATGCACCCATGG+GGG | 0.801481 | 3.3:-88923417 | MS.gene85663:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAAATGAAAAAGATAA+TGG | + | chr3.3:88919228-88919247 | None:intergenic | 10.0% |
| !! | TAATAATTTGAAAAATAGAA+AGG | + | chr3.3:88917521-88917540 | None:intergenic | 10.0% |
| !! | TTAACAAATTTATACTAATA+AGG | + | chr3.3:88923187-88923206 | None:intergenic | 10.0% |
| !! | TTAAGGAAATAATAAAATAT+TGG | - | chr3.3:88919671-88919690 | MS.gene85663:intron | 10.0% |
| !!! | AATAGTTTTGATTTTATTAT+AGG | - | chr3.3:88918921-88918940 | MS.gene85663:intron | 10.0% |
| !! | AATAAAATTGACATCAAATT+TGG | - | chr3.3:88917615-88917634 | MS.gene85663:intron | 15.0% |
| !! | TATATATATTTGTTTGTATC+AGG | + | chr3.3:88917243-88917262 | None:intergenic | 15.0% |
| !!! | ATATCTTTTCATTTATTTCT+AGG | - | chr3.3:88920301-88920320 | MS.gene85663:CDS | 15.0% |
| !!! | ATTTCTTCTTTTTAATTAAC+AGG | - | chr3.3:88917398-88917417 | MS.gene85663:intron | 15.0% |
| !!! | TATTTAATCATATTGAGTTT+TGG | - | chr3.3:88922922-88922941 | MS.gene85663:intron | 15.0% |
| !!! | TGATTATGTTTCTTTTATTT+TGG | - | chr3.3:88921098-88921117 | MS.gene85663:intron | 15.0% |
| !!! | TTTCTTCTTTTTAATTAACA+GGG | - | chr3.3:88917399-88917418 | MS.gene85663:intron | 15.0% |
| !! | AAATCAAAATATGATCTTTG+AGG | + | chr3.3:88923016-88923035 | None:intergenic | 20.0% |
| !! | AACATATTAACAATTAGTGA+AGG | + | chr3.3:88917354-88917373 | None:intergenic | 20.0% |
| !! | AACATTCTATTCTATGTTAA+AGG | - | chr3.3:88921161-88921180 | MS.gene85663:intron | 20.0% |
| !! | AATAATAAAATATTGGTGTG+TGG | - | chr3.3:88919678-88919697 | MS.gene85663:intron | 20.0% |
| !! | AATCAAAATATGATCTTTGA+GGG | + | chr3.3:88923015-88923034 | None:intergenic | 20.0% |
| !! | AATTCTATATACCTGTAATT+TGG | - | chr3.3:88922615-88922634 | MS.gene85663:intron | 20.0% |
| !! | ATAAAAATAGTGCAACATTA+AGG | + | chr3.3:88917768-88917787 | None:intergenic | 20.0% |
| !! | ATGAAAATCAAAATTGTCTT+TGG | + | chr3.3:88922950-88922969 | None:intergenic | 20.0% |
| !! | GAAAAAGTTACATATAAAAC+TGG | - | chr3.3:88918361-88918380 | MS.gene85663:intron | 20.0% |
| !! | GACAATTGTTTAGAAAAAAT+GGG | + | chr3.3:88920956-88920975 | None:intergenic | 20.0% |
| !! | GTTTGAATTGAATACAAAAT+AGG | - | chr3.3:88919914-88919933 | MS.gene85663:intron | 20.0% |
| !! | TAACATAGAATAGAATGTTT+AGG | + | chr3.3:88921160-88921179 | None:intergenic | 20.0% |
| !! | TATCAAAAAGATATCAAGTT+GGG | + | chr3.3:88919009-88919028 | None:intergenic | 20.0% |
| !! | TATCTCTACAAAAAAAAAAG+AGG | + | chr3.3:88918078-88918097 | None:intergenic | 20.0% |
| !! | TCTACATAAAAAGCAAAAAA+TGG | - | chr3.3:88922661-88922680 | MS.gene85663:intron | 20.0% |
| !! | TCTATTTCACTAAGTAAATA+TGG | + | chr3.3:88920814-88920833 | None:intergenic | 20.0% |
| !! | TCTTAAATTAAATAAGGAGA+GGG | - | chr3.3:88923243-88923262 | MS.gene85663:intron | 20.0% |
| !! | TGAAAATCAAAATTGTCTTT+GGG | + | chr3.3:88922949-88922968 | None:intergenic | 20.0% |
| !! | TGACAATTGTTTAGAAAAAA+TGG | + | chr3.3:88920957-88920976 | None:intergenic | 20.0% |
| !! | TTATCAAAAAGATATCAAGT+TGG | + | chr3.3:88919010-88919029 | None:intergenic | 20.0% |
| !! | TTATGTACCTATAAAAAACA+CGG | - | chr3.3:88918486-88918505 | MS.gene85663:intron | 20.0% |
| !! | TTGGTATGTAAAATATTAGA+TGG | - | chr3.3:88921064-88921083 | MS.gene85663:intron | 20.0% |
| !! | TTGTAGAGATATATTTAGAT+GGG | - | chr3.3:88918087-88918106 | MS.gene85663:intron | 20.0% |
| !! | TTTGTAGAGATATATTTAGA+TGG | - | chr3.3:88918086-88918105 | MS.gene85663:intron | 20.0% |
| !!! | AACTTGATATCTTTTTGATA+AGG | - | chr3.3:88919009-88919028 | MS.gene85663:intron | 20.0% |
| !!! | ATAAAAAAAGAACTTGCTAA+AGG | + | chr3.3:88922100-88922119 | None:intergenic | 20.0% |
| !!! | ATAATTAATATTGGCTATGA+GGG | - | chr3.3:88922004-88922023 | MS.gene85663:intron | 20.0% |
| !!! | TCTATTATTTTAATCACAGT+TGG | - | chr3.3:88917273-88917292 | MS.gene85663:intron | 20.0% |
| !!! | TTTAGAACTAAATTTTCCTT+AGG | + | chr3.3:88923290-88923309 | None:intergenic | 20.0% |
| !!! | TTTAGTTCTAAAAAGAGATT+AGG | - | chr3.3:88923298-88923317 | MS.gene85663:CDS | 20.0% |
| ! | AAAAATAGAAAGGATAACAG+AGG | + | chr3.3:88917511-88917530 | None:intergenic | 25.0% |
| ! | AATTGTCAAAACATGTATTC+TGG | - | chr3.3:88920969-88920988 | MS.gene85663:intron | 25.0% |
| ! | ACTAAAACTATCTATTAGTG+TGG | + | chr3.3:88922786-88922805 | None:intergenic | 25.0% |
| ! | ACTTAAATGAAATTAGACTC+TGG | - | chr3.3:88921936-88921955 | MS.gene85663:intron | 25.0% |
| ! | ACTTCTTGATCAATATTACA+AGG | + | chr3.3:88921584-88921603 | None:intergenic | 25.0% |
| ! | AGACTTATAAAGGAACTTTA+TGG | - | chr3.3:88921300-88921319 | MS.gene85663:intron | 25.0% |
| ! | AGGTGAAAACTATATTACTT+CGG | - | chr3.3:88921827-88921846 | MS.gene85663:intron | 25.0% |
| ! | AGTGAAATTGATACGAATTA+GGG | + | chr3.3:88916942-88916961 | None:intergenic | 25.0% |
| ! | AGTGTCCTCATAATTAATAT+TGG | - | chr3.3:88921995-88922014 | MS.gene85663:intron | 25.0% |
| ! | AGTTATATATGATGTTGTCA+TGG | - | chr3.3:88920468-88920487 | MS.gene85663:intron | 25.0% |
| ! | AGTTTAATATCTTCCACAAT+TGG | + | chr3.3:88921028-88921047 | None:intergenic | 25.0% |
| ! | ATACCAGAACATAAGTAAAA+AGG | + | chr3.3:88918179-88918198 | None:intergenic | 25.0% |
| ! | ATTACAAGGTTTGAAAACAA+GGG | + | chr3.3:88921570-88921589 | None:intergenic | 25.0% |
| ! | ATTACAGGTATATAGAATTG+TGG | + | chr3.3:88922614-88922633 | None:intergenic | 25.0% |
| ! | ATTGTCAAAACATGTATTCT+GGG | - | chr3.3:88920970-88920989 | MS.gene85663:intron | 25.0% |
| ! | ATTGTGGAAGATATTAAACT+TGG | - | chr3.3:88921028-88921047 | MS.gene85663:intron | 25.0% |
| ! | ATTTGTTTGTATCAGGAAAA+TGG | + | chr3.3:88917236-88917255 | None:intergenic | 25.0% |
| ! | CATAGCCAATATTAATTATG+AGG | + | chr3.3:88922003-88922022 | None:intergenic | 25.0% |
| ! | CTACAAATGTAGACTTATAA+AGG | - | chr3.3:88921290-88921309 | MS.gene85663:intron | 25.0% |
| ! | CTCTCCTCTTAAATTAAATA+AGG | - | chr3.3:88923237-88923256 | MS.gene85663:intron | 25.0% |
| ! | CTCTTAAATTAAATAAGGAG+AGG | - | chr3.3:88923242-88923261 | MS.gene85663:intron | 25.0% |
| ! | CTTTATAAGTCTACATTTGT+AGG | + | chr3.3:88921292-88921311 | None:intergenic | 25.0% |
| ! | GAAAAATGTTCAAATACACA+TGG | + | chr3.3:88920495-88920514 | None:intergenic | 25.0% |
| ! | GAAAATCAAAATTGTCTTTG+GGG | + | chr3.3:88922948-88922967 | None:intergenic | 25.0% |
| ! | GAAAGATAGAACTTATCATA+TGG | + | chr3.3:88922643-88922662 | None:intergenic | 25.0% |
| ! | GAACTTTATGGAAATCAAAT+CGG | - | chr3.3:88921312-88921331 | MS.gene85663:intron | 25.0% |
| ! | GATTCTTAAGATGTAAATCT+TGG | - | chr3.3:88917955-88917974 | MS.gene85663:intron | 25.0% |
| ! | GGAAAGTGAAAGAAAATAAA+AGG | + | chr3.3:88921539-88921558 | None:intergenic | 25.0% |
| ! | TACATATAAAACTGGAAACA+AGG | - | chr3.3:88918369-88918388 | MS.gene85663:intron | 25.0% |
| ! | TAGTGAAATTGATACGAATT+AGG | + | chr3.3:88916943-88916962 | None:intergenic | 25.0% |
| ! | TATGTACCTATAAAAAACAC+GGG | - | chr3.3:88918487-88918506 | MS.gene85663:intron | 25.0% |
| ! | TATTACAAGGTTTGAAAACA+AGG | + | chr3.3:88921571-88921590 | None:intergenic | 25.0% |
| ! | TCTATTCTATGTTAAAGGTT+GGG | - | chr3.3:88921166-88921185 | MS.gene85663:intron | 25.0% |
| ! | TCTGAGAATTTAAACTAACA+AGG | + | chr3.3:88920884-88920903 | None:intergenic | 25.0% |
| ! | TGTAGAGATATATTTAGATG+GGG | - | chr3.3:88918088-88918107 | MS.gene85663:intron | 25.0% |
| ! | TTACCATGAAAAGTTATTCA+GGG | + | chr3.3:88918417-88918436 | None:intergenic | 25.0% |
| ! | TTCTATTCTATGTTAAAGGT+TGG | - | chr3.3:88921165-88921184 | MS.gene85663:intron | 25.0% |
| ! | TTTACCATGAAAAGTTATTC+AGG | + | chr3.3:88918418-88918437 | None:intergenic | 25.0% |
| !! | AAATGAAAAAGATAATGGCT+CGG | + | chr3.3:88919223-88919242 | None:intergenic | 25.0% |
| !! | ATTTAATTTAAGAGGAGAGT+AGG | + | chr3.3:88923236-88923255 | None:intergenic | 25.0% |
| !! | CATAATTAATATTGGCTATG+AGG | - | chr3.3:88922003-88922022 | MS.gene85663:intron | 25.0% |
| !! | CTCTCCTTATTTAATTTAAG+AGG | + | chr3.3:88923244-88923263 | None:intergenic | 25.0% |
| !! | TCATTTGATGTTGGTTATAT+AGG | - | chr3.3:88922433-88922452 | MS.gene85663:intron | 25.0% |
| !! | TGGTTTTTGATAGAAAACTA+TGG | + | chr3.3:88918857-88918876 | None:intergenic | 25.0% |
| !! | TGTTGAATATGTTCATTTTG+CGG | - | chr3.3:88920634-88920653 | MS.gene85663:intron | 25.0% |
| !!! | ACAGCAATATTTTTTGCATA+TGG | - | chr3.3:88917869-88917888 | MS.gene85663:intron | 25.0% |
| !!! | AGCAGTGTTTTTTTTTTCTT+CGG | - | chr3.3:88919560-88919579 | MS.gene85663:intron | 25.0% |
| !!! | ATGTTGCACTATTTTTATAC+CGG | - | chr3.3:88917770-88917789 | MS.gene85663:intron | 25.0% |
| !!! | CATCTTTTAAAATACAACAG+TGG | - | chr3.3:88918965-88918984 | MS.gene85663:intron | 25.0% |
| !!! | GCTTTATTTCATTGAAGATT+AGG | - | chr3.3:88923385-88923404 | MS.gene85663:intron | 25.0% |
| !!! | GGAAACCAATGATTTTTTTT+GGG | + | chr3.3:88920020-88920039 | None:intergenic | 25.0% |
| !!! | TATATGTAACTTTTTCCTGA+TGG | + | chr3.3:88918357-88918376 | None:intergenic | 25.0% |
| !!! | TTGTATTAGATGATTTTGAC+TGG | - | chr3.3:88921373-88921392 | MS.gene85663:intron | 25.0% |
| AACACTATCTACTGATAAGT+CGG | - | chr3.3:88920903-88920922 | MS.gene85663:intron | 30.0% | |
| AAGATATAATCGTCAGCAAA+TGG | + | chr3.3:88920288-88920307 | None:intergenic | 30.0% | |
| AAGTCTGATATGTGTCTTTA+TGG | - | chr3.3:88922159-88922178 | MS.gene85663:intron | 30.0% | |
| AATGAATGAACAGTAGAAGT+TGG | + | chr3.3:88918023-88918042 | None:intergenic | 30.0% | |
| AATGCAAACCAATAGAAACA+AGG | + | chr3.3:88920522-88920541 | None:intergenic | 30.0% | |
| ACATACAAATCATAGCTTGA+AGG | - | chr3.3:88919434-88919453 | MS.gene85663:intron | 30.0% | |
| ACATACAAATTCCACTAAGT+AGG | - | chr3.3:88919364-88919383 | MS.gene85663:intron | 30.0% | |
| AGATATAATCGTCAGCAAAT+GGG | + | chr3.3:88920287-88920306 | None:intergenic | 30.0% | |
| ATCATATGGAACCAAATTAC+AGG | + | chr3.3:88922629-88922648 | None:intergenic | 30.0% | |
| ATTATTTCCTTAACACTGCT+TGG | + | chr3.3:88919664-88919683 | None:intergenic | 30.0% | |
| ATTGACATCAAATTTGGACT+TGG | - | chr3.3:88917621-88917640 | MS.gene85663:intron | 30.0% | |
| ATTGAGAATGTGAAAAGAGT+AGG | - | chr3.3:88918621-88918640 | MS.gene85663:intron | 30.0% | |
| ATTTCATTGAAGATTAGGCT+GGG | - | chr3.3:88923390-88923409 | MS.gene85663:intron | 30.0% | |
| CAGAAATTCATTGATCATGT+TGG | - | chr3.3:88920542-88920561 | MS.gene85663:intron | 30.0% | |
| CATAAATGGTAAGTGAGATA+TGG | - | chr3.3:88919326-88919345 | MS.gene85663:intron | 30.0% | |
| CATGTTAAAGCTAGTATCTT+TGG | - | chr3.3:88920772-88920791 | MS.gene85663:intron | 30.0% | |
| CGTATCAATTTCACTACAAT+AGG | - | chr3.3:88916947-88916966 | MS.gene85663:CDS | 30.0% | |
| CTATTCTATGTTAAAGGTTG+GGG | - | chr3.3:88921167-88921186 | MS.gene85663:intron | 30.0% | |
| CTTGGATCGTCAAATTTATT+TGG | + | chr3.3:88919646-88919665 | None:intergenic | 30.0% | |
| GAAACTGATATCACTTTGTA+TGG | + | chr3.3:88917588-88917607 | None:intergenic | 30.0% | |
| GAAATTGGTTATATAGGTTG+AGG | - | chr3.3:88922408-88922427 | MS.gene85663:intron | 30.0% | |
| GAGAAAGTTACCTAGAAATA+CGG | + | chr3.3:88917332-88917351 | None:intergenic | 30.0% | |
| GAGAGTTGAGAATACATAAA+TGG | - | chr3.3:88919312-88919331 | MS.gene85663:intron | 30.0% | |
| GATTACTATGAAGAACATCA+AGG | + | chr3.3:88918206-88918225 | None:intergenic | 30.0% | |
| GCTTAAAAGACATGAAAACT+TGG | - | chr3.3:88917302-88917321 | MS.gene85663:intron | 30.0% | |
| GCTTGCATATTTAAGTCATT+TGG | - | chr3.3:88918446-88918465 | MS.gene85663:intron | 30.0% | |
| GTAGAATTTATCTTCGACAT+TGG | + | chr3.3:88921705-88921724 | None:intergenic | 30.0% | |
| TACAAGCATACATGAAAAGA+GGG | + | chr3.3:88921216-88921235 | None:intergenic | 30.0% | |
| TACTTACAATATGAGACTTG+AGG | + | chr3.3:88919480-88919499 | None:intergenic | 30.0% | |
| TAGATTTAATAGGCATCCTA+TGG | - | chr3.3:88919745-88919764 | MS.gene85663:intron | 30.0% | |
| TAGTTTATGAGCTGACATTA+TGG | - | chr3.3:88920227-88920246 | MS.gene85663:intron | 30.0% | |
| TATAAGTCTACATTTGTAGG+AGG | + | chr3.3:88921289-88921308 | None:intergenic | 30.0% | |
| TATATAGTACCTAGCGAAAT+TGG | - | chr3.3:88922393-88922412 | MS.gene85663:intron | 30.0% | |
| TATGCAGAAATGATGAATCT+GGG | - | chr3.3:88923522-88923541 | MS.gene85663:intron | 30.0% | |
| TATTTCATTGAAGATTAGGC+TGG | - | chr3.3:88923389-88923408 | MS.gene85663:intron | 30.0% | |
| TCGCTCTACTATAAAGTTTA+GGG | + | chr3.3:88918669-88918688 | None:intergenic | 30.0% | |
| TCTTCCATCATGTTGAAAAT+TGG | + | chr3.3:88921729-88921748 | None:intergenic | 30.0% | |
| TTACAAGCATACATGAAAAG+AGG | + | chr3.3:88921217-88921236 | None:intergenic | 30.0% | |
| TTATGCAGAAATGATGAATC+TGG | - | chr3.3:88923521-88923540 | MS.gene85663:intron | 30.0% | |
| TTCGCTCTACTATAAAGTTT+AGG | + | chr3.3:88918670-88918689 | None:intergenic | 30.0% | |
| TTGAAAACAAGGGAAAATGT+AGG | + | chr3.3:88921560-88921579 | None:intergenic | 30.0% | |
| ! | AACTAAATTTTCCTTAGGAG+AGG | + | chr3.3:88923285-88923304 | None:intergenic | 30.0% |
| ! | CTTCCTTTTTACTTATGTTC+TGG | - | chr3.3:88918173-88918192 | MS.gene85663:intron | 30.0% |
| ! | GTAATATAGTTTTCACCTTC+TGG | + | chr3.3:88921825-88921844 | None:intergenic | 30.0% |
| ! | GTCTAAAATATTTGTACCCT+CGG | + | chr3.3:88918895-88918914 | None:intergenic | 30.0% |
| ! | TACTCCAATTTTCAACATGA+TGG | - | chr3.3:88921722-88921741 | MS.gene85663:intron | 30.0% |
| ! | TCATTTTCTGTTTCACGTAT+TGG | + | chr3.3:88920418-88920437 | None:intergenic | 30.0% |
| ! | TCTCTAAAGATTACATGCAT+AGG | + | chr3.3:88920613-88920632 | None:intergenic | 30.0% |
| ! | TGATTTTTACCTCTAGCTAT+TGG | + | chr3.3:88919846-88919865 | None:intergenic | 30.0% |
| ! | TTTTCTATCAAAAACCAACG+AGG | - | chr3.3:88918860-88918879 | MS.gene85663:intron | 30.0% |
| ! | TTTTGCGGAATACTGATATT+AGG | - | chr3.3:88920649-88920668 | MS.gene85663:intron | 30.0% |
| !! | AACTGATTTTACCATTGCAT+TGG | + | chr3.3:88920452-88920471 | None:intergenic | 30.0% |
| !! | AGAATGTTTAGGCTTTGTTT+GGG | + | chr3.3:88921149-88921168 | None:intergenic | 30.0% |
| !! | AGTTGTTTTCTATGCTTTAC+AGG | + | chr3.3:88917662-88917681 | None:intergenic | 30.0% |
| !! | ATTTTCAACATGATGGAAGA+TGG | - | chr3.3:88921729-88921748 | MS.gene85663:intron | 30.0% |
| !! | GAATACAAAATAGGTACTGA+TGG | - | chr3.3:88919923-88919942 | MS.gene85663:intron | 30.0% |
| !! | TAGAATGTTTAGGCTTTGTT+TGG | + | chr3.3:88921150-88921169 | None:intergenic | 30.0% |
| !! | TCTAAAACATTTTAACAGCG+TGG | - | chr3.3:88917933-88917952 | MS.gene85663:intron | 30.0% |
| !! | TTTCTAAGCCTTGTTTCTAT+TGG | - | chr3.3:88920511-88920530 | MS.gene85663:intron | 30.0% |
| !!! | AACCAATGATTTTTTTTGGG+AGG | + | chr3.3:88920017-88920036 | None:intergenic | 30.0% |
| !!! | AAGGTAAAGTTTTGAGTATG+GGG | - | chr3.3:88918743-88918762 | MS.gene85663:CDS | 30.0% |
| !!! | ACAAGGTAAAGTTTTGAGTA+TGG | - | chr3.3:88918741-88918760 | MS.gene85663:CDS | 30.0% |
| !!! | ACCAATGATTTTTTTTGGGA+GGG | + | chr3.3:88920016-88920035 | None:intergenic | 30.0% |
| !!! | AGAGAACGATGTCTTATTTT+CGG | - | chr3.3:88921860-88921879 | MS.gene85663:intron | 30.0% |
| !!! | ATCTTACCCGTGTTTTTTAT+AGG | + | chr3.3:88918496-88918515 | None:intergenic | 30.0% |
| !!! | CAAGGTAAAGTTTTGAGTAT+GGG | - | chr3.3:88918742-88918761 | MS.gene85663:CDS | 30.0% |
| !!! | CATTTTTCAGGATATCTCTA+AGG | + | chr3.3:88918047-88918066 | None:intergenic | 30.0% |
| !!! | CGGAAACCAATGATTTTTTT+TGG | + | chr3.3:88920021-88920040 | None:intergenic | 30.0% |
| !!! | GAAATGTGTTGTCTCTTTTT+TGG | + | chr3.3:88922993-88923012 | None:intergenic | 30.0% |
| AAATCCTGGGATAAGATGAT+GGG | - | chr3.3:88919154-88919173 | MS.gene85663:intron | 35.0% | |
| AAATGAGATCTGTGTATCGA+AGG | + | chr3.3:88921647-88921666 | None:intergenic | 35.0% | |
| AACCATCAAGTGAGATTTAG+AGG | - | chr3.3:88919883-88919902 | MS.gene85663:CDS | 35.0% | |
| AAGAGTAGGAGATAGGATAT+TGG | - | chr3.3:88918635-88918654 | MS.gene85663:intron | 35.0% | |
| AATAGTCAAGTCAGAAATCC+TGG | - | chr3.3:88919140-88919159 | MS.gene85663:CDS | 35.0% | |
| AATTAACAGGGATTCTGACA+AGG | - | chr3.3:88917411-88917430 | MS.gene85663:intron | 35.0% | |
| ACAAACTCGATCATGTGATA+AGG | + | chr3.3:88921357-88921376 | None:intergenic | 35.0% | |
| ACAAAGTGACAACAAGATAG+AGG | - | chr3.3:88919515-88919534 | MS.gene85663:intron | 35.0% | |
| ACGCTAAAGAACTAAACACA+TGG | - | chr3.3:88918519-88918538 | MS.gene85663:intron | 35.0% | |
| ACTAACAAGGATATGAGTTG+TGG | + | chr3.3:88920871-88920890 | None:intergenic | 35.0% | |
| AGAGTAGGAGATAGGATATT+GGG | - | chr3.3:88918636-88918655 | MS.gene85663:intron | 35.0% | |
| AGGATAACAGAGGATATAAC+AGG | + | chr3.3:88917501-88917520 | None:intergenic | 35.0% | |
| AGGATATTGAAGGAATAACG+AGG | + | chr3.3:88922507-88922526 | None:intergenic | 35.0% | |
| AGGGGGAAGAAAATTTGAAA+AGG | + | chr3.3:88921449-88921468 | None:intergenic | 35.0% | |
| AGTTTGAACAATATGCTGGA+CGG | - | chr3.3:88917017-88917036 | MS.gene85663:intron | 35.0% | |
| ATAACTCTAGTGTGCACAAA+AGG | - | chr3.3:88919191-88919210 | MS.gene85663:intron | 35.0% | |
| ATAGTCAAGTCAGAAATCCT+GGG | - | chr3.3:88919141-88919160 | MS.gene85663:CDS | 35.0% | |
| ATATCAGACTTAAGTGTGCA+TGG | + | chr3.3:88922150-88922169 | None:intergenic | 35.0% | |
| ATGATCAGAGAAGAGAAGAA+GGG | + | chr3.3:88916907-88916926 | None:intergenic | 35.0% | |
| ATGATCTTCCATTAAGAGTG+CGG | + | chr3.3:88923326-88923345 | None:intergenic | 35.0% | |
| ATGCAACATACATGTCCATA+AGG | + | chr3.3:88920685-88920704 | None:intergenic | 35.0% | |
| ATGGACATGTATGTTGCATA+CGG | - | chr3.3:88920686-88920705 | MS.gene85663:intron | 35.0% | |
| ATGTATCCCTGTTGTACAAA+TGG | + | chr3.3:88922548-88922567 | None:intergenic | 35.0% | |
| ATGTGAAAAGAGTAGGAGAT+AGG | - | chr3.3:88918628-88918647 | MS.gene85663:intron | 35.0% | |
| ATGTTAACACGGGAAATCAT+TGG | - | chr3.3:88921474-88921493 | MS.gene85663:intron | 35.0% | |
| CAAAGTGACAACAAGATAGA+GGG | - | chr3.3:88919516-88919535 | MS.gene85663:intron | 35.0% | |
| CAAATTCTAGATGTACATGC+TGG | + | chr3.3:88922723-88922742 | None:intergenic | 35.0% | |
| CACTAAGTAAATATGGCTAC+AGG | + | chr3.3:88920807-88920826 | None:intergenic | 35.0% | |
| CATAGCTTGAAGGTTGAAAT+TGG | - | chr3.3:88919444-88919463 | MS.gene85663:intron | 35.0% | |
| CCATTTAAGAACACCAATTG+TGG | - | chr3.3:88921012-88921031 | MS.gene85663:intron | 35.0% | |
| CCTAGCGAAATTGGTTATAT+AGG | - | chr3.3:88922402-88922421 | MS.gene85663:intron | 35.0% | |
| CCTATATAACCAATTTCGCT+AGG | + | chr3.3:88922405-88922424 | None:intergenic | 35.0% | |
| CGCTCTACTATAAAGTTTAG+GGG | + | chr3.3:88918668-88918687 | None:intergenic | 35.0% | |
| CTCTTAATGGAAGATCATAC+CGG | - | chr3.3:88923328-88923347 | MS.gene85663:intron | 35.0% | |
| CTTGTACCATTTGTACAACA+GGG | - | chr3.3:88922539-88922558 | MS.gene85663:intron | 35.0% | |
| GCTAGGTACTATATAACTTC+TGG | + | chr3.3:88922388-88922407 | None:intergenic | 35.0% | |
| GGACACATGGTAGATTTAAT+AGG | - | chr3.3:88919735-88919754 | MS.gene85663:intron | 35.0% | |
| GGATATTGAAGGAATAACGA+GGG | + | chr3.3:88922506-88922525 | None:intergenic | 35.0% | |
| GTTGAGGATTCATTTGATGT+TGG | - | chr3.3:88922424-88922443 | MS.gene85663:intron | 35.0% | |
| TACACGTTCAATGCTATACT+TGG | - | chr3.3:88920041-88920060 | MS.gene85663:CDS | 35.0% | |
| TACCTAAATAACATGCACCA+AGG | + | chr3.3:88919292-88919311 | None:intergenic | 35.0% | |
| TACCTCTAAATCTCACTTGA+TGG | + | chr3.3:88919888-88919907 | None:intergenic | 35.0% | |
| TAGAGGGAGATGTAAATTAC+AGG | - | chr3.3:88919532-88919551 | MS.gene85663:intron | 35.0% | |
| TAGGTAACACTAAAAACGAG+AGG | - | chr3.3:88918940-88918959 | MS.gene85663:intron | 35.0% | |
| TATACCGGCAATAATTGAAC+TGG | - | chr3.3:88917785-88917804 | MS.gene85663:intron | 35.0% | |
| TATATTTAGATGGGGAACAG+TGG | - | chr3.3:88918096-88918115 | MS.gene85663:intron | 35.0% | |
| TATCAGACTTAAGTGTGCAT+GGG | + | chr3.3:88922149-88922168 | None:intergenic | 35.0% | |
| TATTCCTTCAATATCCTCTC+TGG | - | chr3.3:88922510-88922529 | MS.gene85663:intron | 35.0% | |
| TCCCGTGTTAACATTTGAAA+GGG | + | chr3.3:88921468-88921487 | None:intergenic | 35.0% | |
| TCGATACACAGATCTCATTT+CGG | - | chr3.3:88921647-88921666 | MS.gene85663:intron | 35.0% | |
| TCTTCTTTCATCCAATGCAA+TGG | - | chr3.3:88920438-88920457 | MS.gene85663:intron | 35.0% | |
| TCTTGTACCATTTGTACAAC+AGG | - | chr3.3:88922538-88922557 | MS.gene85663:intron | 35.0% | |
| TGAACCCACTTAATGGAATA+AGG | - | chr3.3:88919966-88919985 | MS.gene85663:intron | 35.0% | |
| TGTGATGTTACCAATGCATA+TGG | - | chr3.3:88918695-88918714 | MS.gene85663:CDS | 35.0% | |
| TTAGGTCATCATGATCCTTA+TGG | - | chr3.3:88920667-88920686 | MS.gene85663:intron | 35.0% | |
| TTATCATCTATCCTCTCCTA+AGG | - | chr3.3:88923271-88923290 | MS.gene85663:intron | 35.0% | |
| TTCCCGTGTTAACATTTGAA+AGG | + | chr3.3:88921469-88921488 | None:intergenic | 35.0% | |
| TTTATGAGCTGACATTATGG+AGG | - | chr3.3:88920230-88920249 | MS.gene85663:intron | 35.0% | |
| TTTCATTGAAGATTAGGCTG+GGG | - | chr3.3:88923391-88923410 | MS.gene85663:intron | 35.0% | |
| TTTGTGCACACTAGAGTTAT+GGG | + | chr3.3:88919191-88919210 | None:intergenic | 35.0% | |
| ! | AGAATCTAAGACTGCAGAAA+GGG | + | chr3.3:88922314-88922333 | None:intergenic | 35.0% |
| ! | AGAGCGAGATAACTTTGAAA+TGG | + | chr3.3:88922187-88922206 | None:intergenic | 35.0% |
| ! | AGCATTTGCTGAAAAGTGAA+AGG | + | chr3.3:88921971-88921990 | None:intergenic | 35.0% |
| ! | AGTATAGCATTGAACGTGTA+CGG | + | chr3.3:88920041-88920060 | None:intergenic | 35.0% |
| ! | CATCCCTGAATAACTTTTCA+TGG | - | chr3.3:88918411-88918430 | MS.gene85663:intron | 35.0% |
| ! | CCACAATTGGTGTTCTTAAA+TGG | + | chr3.3:88921015-88921034 | None:intergenic | 35.0% |
| ! | CTAAATCTCACTTGATGGTT+TGG | + | chr3.3:88919883-88919902 | None:intergenic | 35.0% |
| ! | GACATCTTTTGCTGGTAATT+TGG | - | chr3.3:88920177-88920196 | MS.gene85663:intron | 35.0% |
| ! | GATGTTGGTTATATAGGTTG+AGG | - | chr3.3:88922439-88922458 | MS.gene85663:intron | 35.0% |
| ! | TCACGTATTGGCAAGAAAAA+TGG | + | chr3.3:88920406-88920425 | None:intergenic | 35.0% |
| ! | TGTTGATTGGTATAACCACT+CGG | - | chr3.3:88919620-88919639 | MS.gene85663:intron | 35.0% |
| ! | TTTTGTGCACACTAGAGTTA+TGG | + | chr3.3:88919192-88919211 | None:intergenic | 35.0% |
| !! | AAAGATATCAAGTTGGGACT+TGG | + | chr3.3:88919003-88919022 | None:intergenic | 35.0% |
| !! | AAGATATCAAGTTGGGACTT+GGG | + | chr3.3:88919002-88919021 | None:intergenic | 35.0% |
| !! | ACTTGGTGTCTTAGTTATCT+TGG | - | chr3.3:88921045-88921064 | MS.gene85663:intron | 35.0% |
| !! | CAAGCCTTATTCCATTAAGT+GGG | + | chr3.3:88919973-88919992 | None:intergenic | 35.0% |
| !! | CAGATAATTTGCTGTTTGGA+AGG | - | chr3.3:88920130-88920149 | MS.gene85663:CDS | 35.0% |
| !! | CTTGTTGTCACTTTGTATGA+TGG | + | chr3.3:88919511-88919530 | None:intergenic | 35.0% |
| !! | GTACTCGCTTTTAGTAACAT+AGG | + | chr3.3:88922755-88922774 | None:intergenic | 35.0% |
| !! | GTTAACAAAATGGTGGATAC+TGG | - | chr3.3:88919815-88919834 | MS.gene85663:intron | 35.0% |
| !!! | AGATGATTTTGACTGGTTAG+TGG | - | chr3.3:88921380-88921399 | MS.gene85663:intron | 35.0% |
| !!! | AGGTAAAGTTTTGAGTATGG+GGG | - | chr3.3:88918744-88918763 | MS.gene85663:CDS | 35.0% |
| !!! | CCAATGATTTTTTTTGGGAG+GGG | + | chr3.3:88920015-88920034 | None:intergenic | 35.0% |
| !!! | GAGGTTTAGAAGCATTTTTC+AGG | + | chr3.3:88918059-88918078 | None:intergenic | 35.0% |
| !!! | GATGATTTTGACTGGTTAGT+GGG | - | chr3.3:88921381-88921400 | MS.gene85663:intron | 35.0% |
| AAAACCCATCATCTTATCCC+AGG | + | chr3.3:88919161-88919180 | None:intergenic | 40.0% | |
| AAAATGGAACTGTGTGCTCA+AGG | + | chr3.3:88920390-88920409 | None:intergenic | 40.0% | |
| AACACAATCTCTGCATATGC+TGG | + | chr3.3:88922238-88922257 | None:intergenic | 40.0% | |
| AACCAATAGATGACTAAGCC+AGG | + | chr3.3:88917726-88917745 | None:intergenic | 40.0% | |
| AACGAGGATATAAACACCGA+GGG | - | chr3.3:88918876-88918895 | MS.gene85663:intron | 40.0% | |
| AACGAGGGAGCAATATATGT+TGG | + | chr3.3:88922491-88922510 | None:intergenic | 40.0% | |
| AAGCTCGTTCAAAGAAACTG+TGG | + | chr3.3:88923129-88923148 | None:intergenic | 40.0% | |
| AAGGAGGGTTAACAAAATGG+TGG | - | chr3.3:88919808-88919827 | MS.gene85663:intron | 40.0% | |
| AATCGTCAGCAAATGGGAAA+CGG | + | chr3.3:88920281-88920300 | None:intergenic | 40.0% | |
| ACACAATCTCTGCATATGCT+GGG | + | chr3.3:88922237-88922256 | None:intergenic | 40.0% | |
| ACCAATGCATATGGACAAGT+AGG | - | chr3.3:88918704-88918723 | MS.gene85663:CDS | 40.0% | |
| ACTCGATCATGTGATAAGGA+AGG | + | chr3.3:88921353-88921372 | None:intergenic | 40.0% | |
| AGAAATGATGAATCTGGGCA+AGG | - | chr3.3:88923527-88923546 | MS.gene85663:intron | 40.0% | |
| AGATCTATTGCAAGCATACG+TGG | - | chr3.3:88920565-88920584 | MS.gene85663:intron | 40.0% | |
| AGGCTACACCAAATAACACA+AGG | + | chr3.3:88917706-88917725 | None:intergenic | 40.0% | |
| AGGGAATGAAGAGCAATACA+AGG | - | chr3.3:88918724-88918743 | MS.gene85663:CDS | 40.0% | |
| ATATCGCTGAACCCACTTAA+TGG | - | chr3.3:88919959-88919978 | MS.gene85663:intron | 40.0% | |
| ATGCACGTGGTTGAATGTTA+TGG | + | chr3.3:88923419-88923438 | None:intergenic | 40.0% | |
| ATTCTAGATGTACATGCTGG+CGG | + | chr3.3:88922720-88922739 | None:intergenic | 40.0% | |
| ATTTATCTTCGACATTGGCC+AGG | + | chr3.3:88921700-88921719 | None:intergenic | 40.0% | |
| CCAATGCATATGGACAAGTA+GGG | - | chr3.3:88918705-88918724 | MS.gene85663:CDS | 40.0% | |
| CCACTTAATGGAATAAGGCT+TGG | - | chr3.3:88919971-88919990 | MS.gene85663:intron | 40.0% | |
| CCAGCATATTGTTCAAACTG+CGG | + | chr3.3:88917016-88917035 | None:intergenic | 40.0% | |
| CCCCCTTTCAAATGTTAACA+CGG | - | chr3.3:88921463-88921482 | MS.gene85663:intron | 40.0% | |
| CCCCTCCCAAAAAAAATCAT+TGG | - | chr3.3:88920012-88920031 | MS.gene85663:intron | 40.0% | |
| CCCCTTTCAAATGTTAACAC+GGG | - | chr3.3:88921464-88921483 | MS.gene85663:intron | 40.0% | |
| CCCGTGTTAACATTTGAAAG+GGG | + | chr3.3:88921467-88921486 | None:intergenic | 40.0% | |
| CCGTGTTAACATTTGAAAGG+GGG | + | chr3.3:88921466-88921485 | None:intergenic | 40.0% | |
| CGGAGTGAAAGGAATTACTT+CGG | + | chr3.3:88916859-88916878 | None:intergenic | 40.0% | |
| CTACAATAAGAGAGCAGGTA+TGG | - | chr3.3:88918135-88918154 | MS.gene85663:intron | 40.0% | |
| CTATGGTAGCAGACATTGAT+GGG | - | chr3.3:88919762-88919781 | MS.gene85663:intron | 40.0% | |
| GAAATCCTGGGATAAGATGA+TGG | - | chr3.3:88919153-88919172 | MS.gene85663:intron | 40.0% | |
| GACATCACAGCTAAGACAAT+GGG | - | chr3.3:88923480-88923499 | MS.gene85663:intron | 40.0% | |
| GATGATCAGAGAAGAGAAGA+AGG | + | chr3.3:88916908-88916927 | None:intergenic | 40.0% | |
| GGACTGTAAGAGACAACAAT+TGG | - | chr3.3:88919385-88919404 | MS.gene85663:intron | 40.0% | |
| GTCAAATTTATTTGGCCGAG+TGG | + | chr3.3:88919638-88919657 | None:intergenic | 40.0% | |
| TCCATAACCAGTACTTTGCT+GGG | + | chr3.3:88919092-88919111 | None:intergenic | 40.0% | |
| TCTCTTACAGTCCTACTTAG+TGG | + | chr3.3:88919378-88919397 | None:intergenic | 40.0% | |
| TGACAAGATCGCAGTTGAAT+GGG | + | chr3.3:88918277-88918296 | None:intergenic | 40.0% | |
| TGACATCACAGCTAAGACAA+TGG | - | chr3.3:88923479-88923498 | MS.gene85663:intron | 40.0% | |
| TGACGTATTAACAAGCCATC+AGG | - | chr3.3:88918339-88918358 | MS.gene85663:intron | 40.0% | |
| TGTTTGGAAGGAGCAAGAAT+TGG | - | chr3.3:88920142-88920161 | MS.gene85663:intron | 40.0% | |
| TTAATGGAAGATCATACCGG+TGG | - | chr3.3:88923331-88923350 | MS.gene85663:intron | 40.0% | |
| TTAGCAGATAAACACACCAC+CGG | + | chr3.3:88923350-88923369 | None:intergenic | 40.0% | |
| TTGTGCACACTAGAGTTATG+GGG | + | chr3.3:88919190-88919209 | None:intergenic | 40.0% | |
| ! | ACCATTTTGTTAACCCTCCT+TGG | + | chr3.3:88919809-88919828 | None:intergenic | 40.0% |
| ! | ACTTGCTACAATAAGAGAGC+AGG | - | chr3.3:88918130-88918149 | MS.gene85663:intron | 40.0% |
| ! | ATGATGGAAGATGGAATCTC+AGG | - | chr3.3:88921738-88921757 | MS.gene85663:intron | 40.0% |
| ! | CAGTATGAGACATCTTTTGC+TGG | - | chr3.3:88920169-88920188 | MS.gene85663:intron | 40.0% |
| ! | CTTCAGTGCCTTGTGTTATT+TGG | - | chr3.3:88917695-88917714 | MS.gene85663:intron | 40.0% |
| ! | GAGAATCTAAGACTGCAGAA+AGG | + | chr3.3:88922315-88922334 | None:intergenic | 40.0% |
| ! | GGAAATTGACTCAGAAGTGT+TGG | - | chr3.3:88923557-88923576 | MS.gene85663:CDS | 40.0% |
| ! | TATATCTGCTGAAGTGCTTG+TGG | + | chr3.3:88922268-88922287 | None:intergenic | 40.0% |
| ! | TGATCTTCCATTAAGAGTGC+GGG | + | chr3.3:88923325-88923344 | None:intergenic | 40.0% |
| ! | TGCCTTGGTGCATGTTATTT+AGG | - | chr3.3:88919287-88919306 | MS.gene85663:intron | 40.0% |
| ! | TGGAAGTATATCTTCGTGTG+AGG | - | chr3.3:88922681-88922700 | MS.gene85663:intron | 40.0% |
| !! | ACAAAATGGTGGATACTGGA+TGG | - | chr3.3:88919819-88919838 | MS.gene85663:intron | 40.0% |
| !! | CCAAGCCTTATTCCATTAAG+TGG | + | chr3.3:88919974-88919993 | None:intergenic | 40.0% |
| !! | GGAGCAGATAATTTGCTGTT+TGG | - | chr3.3:88920126-88920145 | MS.gene85663:CDS | 40.0% |
| !! | TTAGGCTTTGTTTGGGAGTT+AGG | + | chr3.3:88921142-88921161 | None:intergenic | 40.0% |
| !! | TTGTGTTATTTGGTGTAGCC+TGG | - | chr3.3:88917705-88917724 | MS.gene85663:intron | 40.0% |
| !!! | GGTAAAGTTTTGAGTATGGG+GGG | - | chr3.3:88918745-88918764 | MS.gene85663:CDS | 40.0% |
| ACCAATCAACACCAAGCTGA+TGG | + | chr3.3:88919611-88919630 | None:intergenic | 45.0% | |
| ACCACCAGAGAGGATATTGA+AGG | + | chr3.3:88922517-88922536 | None:intergenic | 45.0% | |
| ACTTGGCTGACCGTATTTCT+AGG | - | chr3.3:88917319-88917338 | MS.gene85663:intron | 45.0% | |
| AGCCTGGCTTAGTCATCTAT+TGG | - | chr3.3:88917721-88917740 | MS.gene85663:intron | 45.0% | |
| AGCTGTGATGTCATCTGAGA+AGG | + | chr3.3:88923472-88923491 | None:intergenic | 45.0% | |
| AGGCTGGATCTTTCTCTAGA+TGG | - | chr3.3:88920250-88920269 | MS.gene85663:intron | 45.0% | |
| ATCTTGTCAGGTGCATATGG+AGG | - | chr3.3:88918288-88918307 | MS.gene85663:intron | 45.0% | |
| ATGTGATCGTGTGTGCAACT+AGG | - | chr3.3:88921900-88921919 | MS.gene85663:intron | 45.0% | |
| ATTAGGACCCGCACTCTTAA+TGG | - | chr3.3:88923315-88923334 | MS.gene85663:intron | 45.0% | |
| CAACGAGGATATAAACACCG+AGG | - | chr3.3:88918875-88918894 | MS.gene85663:intron | 45.0% | |
| CATTCAACTGCGATCTTGTC+AGG | - | chr3.3:88918276-88918295 | MS.gene85663:intron | 45.0% | |
| CCATCAATGTCTGCTACCAT+AGG | + | chr3.3:88919764-88919783 | None:intergenic | 45.0% | |
| CCCTACTTGTCCATATGCAT+TGG | + | chr3.3:88918708-88918727 | None:intergenic | 45.0% | |
| CCGCAGTTTGAACAATATGC+TGG | - | chr3.3:88917013-88917032 | MS.gene85663:intron | 45.0% | |
| CCTATGGTAGCAGACATTGA+TGG | - | chr3.3:88919761-88919780 | MS.gene85663:intron | 45.0% | |
| CTGACAAGATCGCAGTTGAA+TGG | + | chr3.3:88918278-88918297 | None:intergenic | 45.0% | |
| CTTGTTGCGAGAGGGATAAT+CGG | + | chr3.3:88916882-88916901 | None:intergenic | 45.0% | |
| GAATCGAACAACCATCAGCT+TGG | - | chr3.3:88919597-88919616 | MS.gene85663:intron | 45.0% | |
| GAATCTGGGCAAGGTGATAT+CGG | - | chr3.3:88923536-88923555 | MS.gene85663:intron | 45.0% | |
| GAATTGATGAGACACTGCCT+TGG | - | chr3.3:88919272-88919291 | MS.gene85663:intron | 45.0% | |
| GCAAGATGATGATAGTCGCT+TGG | - | chr3.3:88917160-88917179 | MS.gene85663:CDS | 45.0% | |
| GCCAAGGAGGGTTAACAAAA+TGG | - | chr3.3:88919805-88919824 | MS.gene85663:intron | 45.0% | |
| GCTGTGATGTCATCTGAGAA+GGG | + | chr3.3:88923471-88923490 | None:intergenic | 45.0% | |
| GGGTCCAGTTCAATTATTGC+CGG | + | chr3.3:88917792-88917811 | None:intergenic | 45.0% | |
| GTCCATAACCAGTACTTTGC+TGG | + | chr3.3:88919093-88919112 | None:intergenic | 45.0% | |
| TCCTTCAATATCCTCTCTGG+TGG | - | chr3.3:88922513-88922532 | MS.gene85663:intron | 45.0% | |
| TCTATGTTAAAGGTTGGGGC+AGG | - | chr3.3:88921171-88921190 | MS.gene85663:intron | 45.0% | |
| TGACGATCCAAGCAGTGTTA+AGG | - | chr3.3:88919654-88919673 | MS.gene85663:intron | 45.0% | |
| TGCAAGCATACGTGGATAGA+CGG | - | chr3.3:88920573-88920592 | MS.gene85663:intron | 45.0% | |
| TGGTAGACTCATGGTTCGTA+AGG | + | chr3.3:88921805-88921824 | None:intergenic | 45.0% | |
| TTCACCTTCTGGTAGACTCA+TGG | + | chr3.3:88921814-88921833 | None:intergenic | 45.0% | |
| TTCTAGATGTACATGCTGGC+GGG | + | chr3.3:88922719-88922738 | None:intergenic | 45.0% | |
| ! | ATGGAATAAGGCTTGGTTGC+AGG | - | chr3.3:88919978-88919997 | MS.gene85663:intron | 45.0% |
| ! | GGCTTGGTTGTTGTTGTTGT+TGG | + | chr3.3:88918793-88918812 | None:intergenic | 45.0% |
| ! | TGGAATAAGGCTTGGTTGCA+GGG | - | chr3.3:88919979-88919998 | MS.gene85663:intron | 45.0% |
| !! | ACCATCAGCTTGGTGTTGAT+TGG | - | chr3.3:88919607-88919626 | MS.gene85663:intron | 45.0% |
| !! | ACCCAGCAAAGTACTGGTTA+TGG | - | chr3.3:88919088-88919107 | MS.gene85663:CDS | 45.0% |
| !! | CTCGGTGTTTATATCCTCGT+TGG | + | chr3.3:88918877-88918896 | None:intergenic | 45.0% |
| !!! | AAATATCTTTTATTTTATTT+TGG | + | chr3.3:88917813-88917832 | None:intergenic | 5.0% |
| !!! | AATATCTTTTATTTTATTTT+GGG | + | chr3.3:88917812-88917831 | None:intergenic | 5.0% |
| !!! | TTAATATTTTTTATGTATTT+GGG | - | chr3.3:88920105-88920124 | MS.gene85663:CDS | 5.0% |
| !!! | TTTAATATTTTTTATGTATT+TGG | - | chr3.3:88920104-88920123 | MS.gene85663:CDS | 5.0% |
| AAGCATTACCACTTCCCCCA+TGG | + | chr3.3:88917053-88917072 | None:intergenic | 50.0% | |
| ACTTAAGTGTGCATGGGAGC+AGG | + | chr3.3:88922143-88922162 | None:intergenic | 50.0% | |
| AGCATTACCACTTCCCCCAT+GGG | + | chr3.3:88917052-88917071 | None:intergenic | 50.0% | |
| ATACGTGGATAGACGGGAAC+AGG | - | chr3.3:88920580-88920599 | MS.gene85663:intron | 50.0% | |
| ATCTACCATGTGTCCACCCT+AGG | + | chr3.3:88919730-88919749 | None:intergenic | 50.0% | |
| CGAACCATGAGTCTACCAGA+AGG | - | chr3.3:88921807-88921826 | MS.gene85663:intron | 50.0% | |
| CGATTATCCCTCTCGCAACA+AGG | - | chr3.3:88916880-88916899 | MS.gene85663:CDS | 50.0% | |
| CTAGCTACCCAGCAAAGTAC+TGG | - | chr3.3:88919082-88919101 | MS.gene85663:CDS | 50.0% | |
| CTGGATGGTCCAATAGCTAG+AGG | - | chr3.3:88919834-88919853 | MS.gene85663:intron | 50.0% | |
| CTTGGCAATAATTGCCGCCA+AGG | + | chr3.3:88919791-88919810 | None:intergenic | 50.0% | |
| CTTGGCGGCAATTATTGCCA+AGG | - | chr3.3:88919789-88919808 | MS.gene85663:intron | 50.0% | |
| GATGGGGAACAGTGGAATGA+TGG | - | chr3.3:88918104-88918123 | MS.gene85663:intron | 50.0% | |
| GCAAGCATACGTGGATAGAC+GGG | - | chr3.3:88920574-88920593 | MS.gene85663:intron | 50.0% | |
| GCACGAGCTTCTCAAACACA+AGG | - | chr3.3:88917469-88917488 | MS.gene85663:intron | 50.0% | |
| GCGATCTTGTCAGGTGCATA+TGG | - | chr3.3:88918285-88918304 | MS.gene85663:intron | 50.0% | |
| GCGGCAATTATTGCCAAGGA+GGG | - | chr3.3:88919793-88919812 | MS.gene85663:intron | 50.0% | |
| GTCAGCAAATGGGAAACGGA+AGG | + | chr3.3:88920277-88920296 | None:intergenic | 50.0% | |
| GTGTGGAGCAGACATTGATG+TGG | - | chr3.3:88919695-88919714 | MS.gene85663:intron | 50.0% | |
| TAGGATAGTCGAACTGGTGC+AGG | + | chr3.3:88921771-88921790 | None:intergenic | 50.0% | |
| TCTAGATGTACATGCTGGCG+GGG | + | chr3.3:88922718-88922737 | None:intergenic | 50.0% | |
| TCTGCGTAGGATAGTCGAAC+TGG | + | chr3.3:88921777-88921796 | None:intergenic | 50.0% | |
| TGAGCTGACATTATGGAGGC+TGG | - | chr3.3:88920234-88920253 | MS.gene85663:intron | 50.0% | |
| TGGGAGCAGGCTTGTAGAAT+AGG | + | chr3.3:88922130-88922149 | None:intergenic | 50.0% | |
| TTAAAGGTTGGGGCAGGCAT+AGG | - | chr3.3:88921177-88921196 | MS.gene85663:intron | 50.0% | |
| ! | AAGCCTTATCCCGCTAAGTG+GGG | - | chr3.3:88918808-88918827 | MS.gene85663:CDS | 50.0% |
| ! | CAAGCCTTATCCCGCTAAGT+GGG | - | chr3.3:88918807-88918826 | MS.gene85663:CDS | 50.0% |
| ! | GCTAGCACTGAGATTCGAGT+TGG | + | chr3.3:88921678-88921697 | None:intergenic | 50.0% |
| ! | TGAGTTTTACCACTGCGTGC+TGG | - | chr3.3:88920333-88920352 | MS.gene85663:intron | 50.0% |
| !! | AGACATTGATGTGGTGCTGC+AGG | - | chr3.3:88919704-88919723 | MS.gene85663:intron | 50.0% |
| !!! | AGTTTTGAGTATGGGGGGTG+TGG | - | chr3.3:88918750-88918769 | MS.gene85663:CDS | 50.0% |
| ACTTACTCTCCAGCACGCAG+TGG | + | chr3.3:88920345-88920364 | None:intergenic | 55.0% | |
| AGAAGGGACCTTGTTGCGAG+AGG | + | chr3.3:88916891-88916910 | None:intergenic | 55.0% | |
| AGCTGTGCTCTCTATGCACG+TGG | + | chr3.3:88923432-88923451 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+CGG | + | chr3.3:88918821-88918840 | None:intergenic | 55.0% | |
| CCACTTAGCGGGATAAGGCT+TGG | + | chr3.3:88918809-88918828 | None:intergenic | 55.0% | |
| CTAGATGTACATGCTGGCGG+GGG | + | chr3.3:88922717-88922736 | None:intergenic | 55.0% | |
| CTCGAATCTCAGTGCTAGCC+TGG | - | chr3.3:88921679-88921698 | MS.gene85663:intron | 55.0% | |
| CTGGGTAGCTAGACTCTCTC+TGG | + | chr3.3:88919074-88919093 | None:intergenic | 55.0% | |
| CTTATCCCGCTAAGTGGGGT+CGG | - | chr3.3:88918812-88918831 | MS.gene85663:CDS | 55.0% | |
| GAAGGGACCTTGTTGCGAGA+GGG | + | chr3.3:88916890-88916909 | None:intergenic | 55.0% | |
| GGCAATAATTGCCGCCAAGG+AGG | + | chr3.3:88919788-88919807 | None:intergenic | 55.0% | |
| GGCGGCAATTATTGCCAAGG+AGG | - | chr3.3:88919792-88919811 | MS.gene85663:intron | 55.0% | |
| GGGATAATCGGCGGAGTGAA+AGG | + | chr3.3:88916870-88916889 | None:intergenic | 55.0% | |
| GGTACAAGACACCACCAGAG+AGG | + | chr3.3:88922527-88922546 | None:intergenic | 55.0% | |
| GTTGCGAGAGGGATAATCGG+CGG | + | chr3.3:88916879-88916898 | None:intergenic | 55.0% | |
| TGCAGAAAGGGCGAAGCTCT+AGG | + | chr3.3:88922302-88922321 | None:intergenic | 55.0% | |
| ! | ACATTGATGGGCCTCCTTGG+CGG | - | chr3.3:88919774-88919793 | MS.gene85663:intron | 55.0% |
| ! | CAGACATTGATGGGCCTCCT+TGG | - | chr3.3:88919771-88919790 | MS.gene85663:intron | 55.0% |
| ! | CCAAGCCTTATCCCGCTAAG+TGG | - | chr3.3:88918806-88918825 | MS.gene85663:CDS | 55.0% |
| ! | TCGTAAGGCGTCTTCTGCGT+AGG | + | chr3.3:88921790-88921809 | None:intergenic | 55.0% |
| ACGGACGTATGCACCCATGG+GGG | - | chr3.3:88917036-88917055 | MS.gene85663:intron | 60.0% | |
| ATGTACATGCTGGCGGGGGA+GGG | + | chr3.3:88922713-88922732 | None:intergenic | 60.0% | |
| CGACCCCACTTAGCGGGATA+AGG | + | chr3.3:88918814-88918833 | None:intergenic | 60.0% | |
| GACGGACGTATGCACCCATG+GGG | - | chr3.3:88917035-88917054 | MS.gene85663:intron | 60.0% | |
| GCTAAGTGGGGTCGGCTACA+TGG | - | chr3.3:88918820-88918839 | MS.gene85663:CDS | 60.0% | |
| GGACGGACGTATGCACCCAT+GGG | - | chr3.3:88917034-88917053 | MS.gene85663:intron | 60.0% | |
| GTATGCACCCATGGGGGAAG+TGG | - | chr3.3:88917042-88917061 | MS.gene85663:intron | 60.0% | |
| TGGACGGACGTATGCACCCA+TGG | - | chr3.3:88917033-88917052 | MS.gene85663:intron | 60.0% | |
| TGTAGCCGACCCCACTTAGC+GGG | + | chr3.3:88918820-88918839 | None:intergenic | 60.0% | |
| !! | GATGTGGTGCTGCAGGCCTA+GGG | - | chr3.3:88919711-88919730 | MS.gene85663:intron | 60.0% |
| !! | TGATGTGGTGCTGCAGGCCT+AGG | - | chr3.3:88919710-88919729 | MS.gene85663:intron | 60.0% |
| GATGTACATGCTGGCGGGGG+AGG | + | chr3.3:88922714-88922733 | None:intergenic | 65.0% | |
| GCAGGCCTAGGGTGGACACA+TGG | - | chr3.3:88919722-88919741 | MS.gene85663:intron | 65.0% | |
| TGTACATGCTGGCGGGGGAG+GGG | + | chr3.3:88922712-88922731 | None:intergenic | 65.0% | |
| ! | GTATGGGGGGTGTGGCAACG+AGG | - | chr3.3:88918758-88918777 | MS.gene85663:CDS | 65.0% |
| GTACATGCTGGCGGGGGAGG+GGG | + | chr3.3:88922711-88922730 | None:intergenic | 70.0% | |
| TACATGCTGGCGGGGGAGGG+GGG | + | chr3.3:88922710-88922729 | None:intergenic | 70.0% | |
| !! | GTGGTGCTGCAGGCCTAGGG+TGG | - | chr3.3:88919714-88919733 | MS.gene85663:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 88916828 | 88923647 | 88916828 | ID=MS.gene85663 |
| chr3.3 | mRNA | 88916828 | 88923647 | 88916828 | ID=MS.gene85663.t1;Parent=MS.gene85663 |
| chr3.3 | exon | 88923546 | 88923647 | 88923546 | ID=MS.gene85663.t1.exon1;Parent=MS.gene85663.t1 |
| chr3.3 | CDS | 88923546 | 88923647 | 88923546 | ID=cds.MS.gene85663.t1;Parent=MS.gene85663.t1 |
| chr3.3 | exon | 88923412 | 88923456 | 88923412 | ID=MS.gene85663.t1.exon2;Parent=MS.gene85663.t1 |
| chr3.3 | CDS | 88923412 | 88923456 | 88923412 | ID=cds.MS.gene85663.t1;Parent=MS.gene85663.t1 |
| chr3.3 | exon | 88923275 | 88923329 | 88923275 | ID=MS.gene85663.t1.exon3;Parent=MS.gene85663.t1 |
| chr3.3 | CDS | 88923275 | 88923329 | 88923275 | ID=cds.MS.gene85663.t1;Parent=MS.gene85663.t1 |
| chr3.3 | exon | 88923135 | 88923183 | 88923135 | ID=MS.gene85663.t1.exon4;Parent=MS.gene85663.t1 |
| chr3.3 | CDS | 88923135 | 88923183 | 88923135 | ID=cds.MS.gene85663.t1;Parent=MS.gene85663.t1 |
| chr3.3 | exon | 88922985 | 88923055 | 88922985 | ID=MS.gene85663.t1.exon5;Parent=MS.gene85663.t1 |
| chr3.3 | CDS | 88922985 | 88923055 | 88922985 | ID=cds.MS.gene85663.t1;Parent=MS.gene85663.t1 |
| chr3.3 | exon | 88922324 | 88922382 | 88922324 | ID=MS.gene85663.t1.exon6;Parent=MS.gene85663.t1 |
| chr3.3 | CDS | 88922324 | 88922382 | 88922324 | ID=cds.MS.gene85663.t1;Parent=MS.gene85663.t1 |
| chr3.3 | exon | 88922085 | 88922177 | 88922085 | ID=MS.gene85663.t1.exon7;Parent=MS.gene85663.t1 |
| chr3.3 | CDS | 88922085 | 88922177 | 88922085 | ID=cds.MS.gene85663.t1;Parent=MS.gene85663.t1 |
| chr3.3 | exon | 88920285 | 88920342 | 88920285 | ID=MS.gene85663.t1.exon8;Parent=MS.gene85663.t1 |
| chr3.3 | CDS | 88920285 | 88920342 | 88920285 | ID=cds.MS.gene85663.t1;Parent=MS.gene85663.t1 |
| chr3.3 | exon | 88920016 | 88920152 | 88920016 | ID=MS.gene85663.t1.exon9;Parent=MS.gene85663.t1 |
| chr3.3 | CDS | 88920016 | 88920152 | 88920016 | ID=cds.MS.gene85663.t1;Parent=MS.gene85663.t1 |
| chr3.3 | exon | 88919874 | 88919930 | 88919874 | ID=MS.gene85663.t1.exon10;Parent=MS.gene85663.t1 |
| chr3.3 | CDS | 88919874 | 88919930 | 88919874 | ID=cds.MS.gene85663.t1;Parent=MS.gene85663.t1 |
| chr3.3 | exon | 88919081 | 88919163 | 88919081 | ID=MS.gene85663.t1.exon11;Parent=MS.gene85663.t1 |
| chr3.3 | CDS | 88919081 | 88919163 | 88919081 | ID=cds.MS.gene85663.t1;Parent=MS.gene85663.t1 |
| chr3.3 | exon | 88918647 | 88918846 | 88918647 | ID=MS.gene85663.t1.exon12;Parent=MS.gene85663.t1 |
| chr3.3 | CDS | 88918647 | 88918846 | 88918647 | ID=cds.MS.gene85663.t1;Parent=MS.gene85663.t1 |
| chr3.3 | exon | 88917123 | 88917182 | 88917123 | ID=MS.gene85663.t1.exon13;Parent=MS.gene85663.t1 |
| chr3.3 | CDS | 88917123 | 88917182 | 88917123 | ID=cds.MS.gene85663.t1;Parent=MS.gene85663.t1 |
| chr3.3 | exon | 88916828 | 88916997 | 88916828 | ID=MS.gene85663.t1.exon14;Parent=MS.gene85663.t1 |
| chr3.3 | CDS | 88916828 | 88916997 | 88916828 | ID=cds.MS.gene85663.t1;Parent=MS.gene85663.t1 |
| Gene Sequence |
| Protein sequence |
