Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75003.t1 | XP_024627674.1 | 100 | 197 | 0 | 0 | 1 | 197 | 1 | 197 | 1.50E-105 | 392.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75003.t1 | O22703 | 66.2 | 142 | 39 | 2 | 3 | 143 | 8 | 141 | 4.2e-48 | 192.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75003.t1 | A0A396JVW2 | 100.0 | 197 | 0 | 0 | 1 | 197 | 1 | 197 | 1.1e-105 | 392.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene75003 | 0.809408 | 1.92E-50 | -1.69E-46 |
| MS.gene049159 | MS.gene75003 | 0.846156 | 2.59E-59 | -1.69E-46 |
| MS.gene049254 | MS.gene75003 | 0.830299 | 3.18E-55 | -1.69E-46 |
| MS.gene049255 | MS.gene75003 | 0.827785 | 1.29E-54 | -1.69E-46 |
| MS.gene049341 | MS.gene75003 | 0.80244 | 5.60E-49 | -1.69E-46 |
| MS.gene049368 | MS.gene75003 | 0.800983 | 1.12E-48 | -1.69E-46 |
| MS.gene049404 | MS.gene75003 | 0.80185 | 7.41E-49 | -1.69E-46 |
| MS.gene049452 | MS.gene75003 | 0.805585 | 1.24E-49 | -1.69E-46 |
| MS.gene049666 | MS.gene75003 | 0.817729 | 2.83E-52 | -1.69E-46 |
| MS.gene049821 | MS.gene75003 | 0.83401 | 3.84E-56 | -1.69E-46 |
| MS.gene049824 | MS.gene75003 | 0.833373 | 5.54E-56 | -1.69E-46 |
| MS.gene049825 | MS.gene75003 | 0.846865 | 1.66E-59 | -1.69E-46 |
| MS.gene049850 | MS.gene75003 | 0.841081 | 5.90E-58 | -1.69E-46 |
| MS.gene049873 | MS.gene75003 | 0.862108 | 6.40E-64 | -1.69E-46 |
| MS.gene050026 | MS.gene75003 | 0.806261 | 8.96E-50 | -1.69E-46 |
| MS.gene050273 | MS.gene75003 | 0.812757 | 3.61E-51 | -1.69E-46 |
| MS.gene050303 | MS.gene75003 | 0.82183 | 3.28E-53 | -1.69E-46 |
| MS.gene050355 | MS.gene75003 | 0.828184 | 1.04E-54 | -1.69E-46 |
| MS.gene050559 | MS.gene75003 | 0.825138 | 5.52E-54 | -1.69E-46 |
| MS.gene050561 | MS.gene75003 | 0.816153 | 6.40E-52 | -1.69E-46 |
| MS.gene050562 | MS.gene75003 | 0.802743 | 4.85E-49 | -1.69E-46 |
| MS.gene050689 | MS.gene75003 | 0.832917 | 7.19E-56 | -1.69E-46 |
| MS.gene050799 | MS.gene75003 | 0.820716 | 5.92E-53 | -1.69E-46 |
| MS.gene050905 | MS.gene75003 | -0.806168 | 9.38E-50 | -1.69E-46 |
| MS.gene051247 | MS.gene75003 | 0.808184 | 3.51E-50 | -1.69E-46 |
| MS.gene051279 | MS.gene75003 | 0.808777 | 2.62E-50 | -1.69E-46 |
| MS.gene051328 | MS.gene75003 | 0.836082 | 1.15E-56 | -1.69E-46 |
| MS.gene05134 | MS.gene75003 | 0.800615 | 1.33E-48 | -1.69E-46 |
| MS.gene051363 | MS.gene75003 | 0.836113 | 1.13E-56 | -1.69E-46 |
| MS.gene051365 | MS.gene75003 | 0.805815 | 1.11E-49 | -1.69E-46 |
| MS.gene051594 | MS.gene75003 | 0.809804 | 1.58E-50 | -1.69E-46 |
| MS.gene051628 | MS.gene75003 | 0.802775 | 4.78E-49 | -1.69E-46 |
| MS.gene051700 | MS.gene75003 | 0.812951 | 3.27E-51 | -1.69E-46 |
| MS.gene051719 | MS.gene75003 | 0.834578 | 2.76E-56 | -1.69E-46 |
| MS.gene051720 | MS.gene75003 | 0.827368 | 1.63E-54 | -1.69E-46 |
| MS.gene051744 | MS.gene75003 | 0.826929 | 2.07E-54 | -1.69E-46 |
| MS.gene05188 | MS.gene75003 | 0.80363 | 3.18E-49 | -1.69E-46 |
| MS.gene051957 | MS.gene75003 | 0.824665 | 7.14E-54 | -1.69E-46 |
| MS.gene051975 | MS.gene75003 | 0.814409 | 1.56E-51 | -1.69E-46 |
| MS.gene052012 | MS.gene75003 | 0.807465 | 4.99E-50 | -1.69E-46 |
| MS.gene052020 | MS.gene75003 | 0.801713 | 7.91E-49 | -1.69E-46 |
| MS.gene052133 | MS.gene75003 | 0.805407 | 1.36E-49 | -1.69E-46 |
| MS.gene052208 | MS.gene75003 | 0.81731 | 3.52E-52 | -1.69E-46 |
| MS.gene052516 | MS.gene75003 | 0.83075 | 2.46E-55 | -1.69E-46 |
| MS.gene052519 | MS.gene75003 | 0.883266 | 5.19E-71 | -1.69E-46 |
| MS.gene052582 | MS.gene75003 | 0.841194 | 5.51E-58 | -1.69E-46 |
| MS.gene052584 | MS.gene75003 | 0.85311 | 2.97E-61 | -1.69E-46 |
| MS.gene052611 | MS.gene75003 | 0.806469 | 8.10E-50 | -1.69E-46 |
| MS.gene052773 | MS.gene75003 | 0.816172 | 6.34E-52 | -1.69E-46 |
| MS.gene052863 | MS.gene75003 | 0.827393 | 1.60E-54 | -1.69E-46 |
| MS.gene053006 | MS.gene75003 | 0.832013 | 1.20E-55 | -1.69E-46 |
| MS.gene053008 | MS.gene75003 | 0.837798 | 4.20E-57 | -1.69E-46 |
| MS.gene053080 | MS.gene75003 | 0.826546 | 2.56E-54 | -1.69E-46 |
| MS.gene053122 | MS.gene75003 | 0.823167 | 1.60E-53 | -1.69E-46 |
| MS.gene053226 | MS.gene75003 | 0.889512 | 2.27E-73 | -1.69E-46 |
| MS.gene053599 | MS.gene75003 | 0.826596 | 2.49E-54 | -1.69E-46 |
| MS.gene05364 | MS.gene75003 | 0.843846 | 1.09E-58 | -1.69E-46 |
| MS.gene05365 | MS.gene75003 | 0.822345 | 2.49E-53 | -1.69E-46 |
| MS.gene053678 | MS.gene75003 | 0.803296 | 3.73E-49 | -1.69E-46 |
| MS.gene053931 | MS.gene75003 | 0.824812 | 6.59E-54 | -1.69E-46 |
| MS.gene053967 | MS.gene75003 | 0.808786 | 2.61E-50 | -1.69E-46 |
| MS.gene053995 | MS.gene75003 | 0.821755 | 3.41E-53 | -1.69E-46 |
| MS.gene05415 | MS.gene75003 | 0.804232 | 2.38E-49 | -1.69E-46 |
| MS.gene054236 | MS.gene75003 | 0.807263 | 5.50E-50 | -1.69E-46 |
| MS.gene054472 | MS.gene75003 | 0.802093 | 6.61E-49 | -1.69E-46 |
| MS.gene05458 | MS.gene75003 | 0.81161 | 6.42E-51 | -1.69E-46 |
| MS.gene054651 | MS.gene75003 | 0.869519 | 2.91E-66 | -1.69E-46 |
| MS.gene054775 | MS.gene75003 | 0.830103 | 3.55E-55 | -1.69E-46 |
| MS.gene054994 | MS.gene75003 | 0.815192 | 1.05E-51 | -1.69E-46 |
| MS.gene055166 | MS.gene75003 | 0.816018 | 6.87E-52 | -1.69E-46 |
| MS.gene05517 | MS.gene75003 | 0.834211 | 3.42E-56 | -1.69E-46 |
| MS.gene055222 | MS.gene75003 | 0.807559 | 4.77E-50 | -1.69E-46 |
| MS.gene055465 | MS.gene75003 | 0.808586 | 2.88E-50 | -1.69E-46 |
| MS.gene055466 | MS.gene75003 | 0.845787 | 3.27E-59 | -1.69E-46 |
| MS.gene055468 | MS.gene75003 | 0.82494 | 6.15E-54 | -1.69E-46 |
| MS.gene05548 | MS.gene75003 | 0.80435 | 2.25E-49 | -1.69E-46 |
| MS.gene055512 | MS.gene75003 | 0.816297 | 5.95E-52 | -1.69E-46 |
| MS.gene055555 | MS.gene75003 | 0.819557 | 1.09E-52 | -1.69E-46 |
| MS.gene055589 | MS.gene75003 | 0.814936 | 1.19E-51 | -1.69E-46 |
| MS.gene055778 | MS.gene75003 | 0.849681 | 2.77E-60 | -1.69E-46 |
| MS.gene055808 | MS.gene75003 | 0.81678 | 4.64E-52 | -1.69E-46 |
| MS.gene055818 | MS.gene75003 | 0.858933 | 5.86E-63 | -1.69E-46 |
| MS.gene055841 | MS.gene75003 | 0.819979 | 8.74E-53 | -1.69E-46 |
| MS.gene056091 | MS.gene75003 | 0.806661 | 7.38E-50 | -1.69E-46 |
| MS.gene056162 | MS.gene75003 | 0.804075 | 2.57E-49 | -1.69E-46 |
| MS.gene056173 | MS.gene75003 | 0.802374 | 5.78E-49 | -1.69E-46 |
| MS.gene056174 | MS.gene75003 | 0.814917 | 1.21E-51 | -1.69E-46 |
| MS.gene056215 | MS.gene75003 | 0.872249 | 3.68E-67 | -1.69E-46 |
| MS.gene056366 | MS.gene75003 | 0.835027 | 2.13E-56 | -1.69E-46 |
| MS.gene056595 | MS.gene75003 | 0.839503 | 1.52E-57 | -1.69E-46 |
| MS.gene056642 | MS.gene75003 | 0.820398 | 7.00E-53 | -1.69E-46 |
| MS.gene05686 | MS.gene75003 | 0.823143 | 1.62E-53 | -1.69E-46 |
| MS.gene05689 | MS.gene75003 | 0.805157 | 1.53E-49 | -1.69E-46 |
| MS.gene05690 | MS.gene75003 | 0.83272 | 8.05E-56 | -1.69E-46 |
| MS.gene057027 | MS.gene75003 | 0.804956 | 1.68E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene75003 | 0.839601 | 1.44E-57 | -1.69E-46 |
| MS.gene057102 | MS.gene75003 | 0.813219 | 2.86E-51 | -1.69E-46 |
| MS.gene057208 | MS.gene75003 | 0.853377 | 2.49E-61 | -1.69E-46 |
| MS.gene057314 | MS.gene75003 | 0.836028 | 1.19E-56 | -1.69E-46 |
| MS.gene057444 | MS.gene75003 | 0.812395 | 4.33E-51 | -1.69E-46 |
| MS.gene057598 | MS.gene75003 | 0.808894 | 2.47E-50 | -1.69E-46 |
| MS.gene057693 | MS.gene75003 | 0.847974 | 8.23E-60 | -1.69E-46 |
| MS.gene057705 | MS.gene75003 | 0.845192 | 4.73E-59 | -1.69E-46 |
| MS.gene057915 | MS.gene75003 | 0.841622 | 4.25E-58 | -1.69E-46 |
| MS.gene058008 | MS.gene75003 | 0.822159 | 2.75E-53 | -1.69E-46 |
| MS.gene058009 | MS.gene75003 | 0.843111 | 1.71E-58 | -1.69E-46 |
| MS.gene058010 | MS.gene75003 | 0.815409 | 9.38E-52 | -1.69E-46 |
| MS.gene058037 | MS.gene75003 | 0.85108 | 1.12E-60 | -1.69E-46 |
| MS.gene058126 | MS.gene75003 | 0.80435 | 2.25E-49 | -1.69E-46 |
| MS.gene058548 | MS.gene75003 | 0.819766 | 9.77E-53 | -1.69E-46 |
| MS.gene058549 | MS.gene75003 | 0.806191 | 9.27E-50 | -1.69E-46 |
| MS.gene058625 | MS.gene75003 | 0.859478 | 4.02E-63 | -1.69E-46 |
| MS.gene058781 | MS.gene75003 | 0.815156 | 1.07E-51 | -1.69E-46 |
| MS.gene058783 | MS.gene75003 | 0.859692 | 3.47E-63 | -1.69E-46 |
| MS.gene058829 | MS.gene75003 | 0.800914 | 1.15E-48 | -1.69E-46 |
| MS.gene058979 | MS.gene75003 | 0.832623 | 8.50E-56 | -1.69E-46 |
| MS.gene059151 | MS.gene75003 | 0.801762 | 7.73E-49 | -1.69E-46 |
| MS.gene05950 | MS.gene75003 | 0.806893 | 6.59E-50 | -1.69E-46 |
| MS.gene05954 | MS.gene75003 | 0.856929 | 2.31E-62 | -1.69E-46 |
| MS.gene059625 | MS.gene75003 | 0.833232 | 6.00E-56 | -1.69E-46 |
| MS.gene05978 | MS.gene75003 | 0.82833 | 9.54E-55 | -1.69E-46 |
| MS.gene05979 | MS.gene75003 | 0.822652 | 2.11E-53 | -1.69E-46 |
| MS.gene059842 | MS.gene75003 | 0.85344 | 2.39E-61 | -1.69E-46 |
| MS.gene059935 | MS.gene75003 | 0.821834 | 3.27E-53 | -1.69E-46 |
| MS.gene060365 | MS.gene75003 | 0.822946 | 1.80E-53 | -1.69E-46 |
| MS.gene060429 | MS.gene75003 | 0.868618 | 5.71E-66 | -1.69E-46 |
| MS.gene060521 | MS.gene75003 | 0.843281 | 1.54E-58 | -1.69E-46 |
| MS.gene060572 | MS.gene75003 | 0.813176 | 2.92E-51 | -1.69E-46 |
| MS.gene060587 | MS.gene75003 | 0.826657 | 2.41E-54 | -1.69E-46 |
| MS.gene060634 | MS.gene75003 | -0.803534 | 3.33E-49 | -1.69E-46 |
| MS.gene060803 | MS.gene75003 | 0.850821 | 1.33E-60 | -1.69E-46 |
| MS.gene060907 | MS.gene75003 | 0.800981 | 1.12E-48 | -1.69E-46 |
| MS.gene060917 | MS.gene75003 | 0.818679 | 1.73E-52 | -1.69E-46 |
| MS.gene060935 | MS.gene75003 | 0.833947 | 3.98E-56 | -1.69E-46 |
| MS.gene060937 | MS.gene75003 | 0.809294 | 2.03E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75003.t1 | MTR_4g070080 | 48.750 | 80 | 41 | 0 | 6 | 85 | 5 | 84 | 3.35e-22 | 87.4 |
| MS.gene75003.t1 | MTR_4g070140 | 47.619 | 84 | 44 | 0 | 2 | 85 | 3 | 86 | 4.04e-22 | 89.0 |
| MS.gene75003.t1 | MTR_4g070190 | 48.810 | 84 | 43 | 0 | 2 | 85 | 3 | 86 | 1.10e-21 | 87.4 |
| MS.gene75003.t1 | MTR_4g070080 | 49.367 | 79 | 40 | 0 | 6 | 84 | 5 | 83 | 1.17e-21 | 87.0 |
| MS.gene75003.t1 | MTR_7g013730 | 44.304 | 79 | 44 | 0 | 8 | 86 | 41 | 119 | 1.67e-18 | 80.9 |
| MS.gene75003.t1 | MTR_4g109540 | 40.698 | 86 | 51 | 0 | 1 | 86 | 36 | 121 | 7.37e-18 | 79.3 |
| MS.gene75003.t1 | MTR_3g075500 | 44.048 | 84 | 45 | 1 | 8 | 89 | 207 | 290 | 2.66e-17 | 78.2 |
| MS.gene75003.t1 | MTR_3g025880 | 36.047 | 86 | 55 | 0 | 1 | 86 | 38 | 123 | 3.97e-17 | 79.0 |
| MS.gene75003.t1 | MTR_4g104470 | 45.570 | 79 | 43 | 0 | 8 | 86 | 217 | 295 | 9.00e-17 | 77.0 |
| MS.gene75003.t1 | MTR_4g104470 | 40.244 | 82 | 49 | 0 | 5 | 86 | 120 | 201 | 1.16e-14 | 71.2 |
| MS.gene75003.t1 | MTR_3g080130 | 41.463 | 82 | 46 | 1 | 7 | 86 | 36 | 117 | 3.18e-16 | 72.0 |
| MS.gene75003.t1 | MTR_7g105260 | 35.897 | 78 | 50 | 0 | 8 | 85 | 33 | 110 | 3.25e-16 | 72.4 |
| MS.gene75003.t1 | MTR_4g109540 | 41.772 | 79 | 46 | 0 | 8 | 86 | 51 | 129 | 2.75e-15 | 72.4 |
| MS.gene75003.t1 | MTR_3g075500 | 46.875 | 64 | 34 | 0 | 8 | 71 | 207 | 270 | 2.99e-15 | 72.4 |
| MS.gene75003.t1 | MTR_2g026180 | 34.862 | 109 | 64 | 2 | 8 | 116 | 37 | 138 | 3.80e-15 | 73.2 |
| MS.gene75003.t1 | MTR_1g073690 | 36.986 | 73 | 43 | 1 | 4 | 73 | 3 | 75 | 5.99e-15 | 72.8 |
| MS.gene75003.t1 | MTR_1g073690 | 34.091 | 88 | 57 | 1 | 8 | 95 | 113 | 199 | 9.60e-12 | 63.5 |
| MS.gene75003.t1 | MTR_2g026180 | 34.862 | 109 | 64 | 2 | 8 | 116 | 107 | 208 | 7.63e-15 | 72.4 |
| MS.gene75003.t1 | MTR_2g026180 | 38.144 | 97 | 55 | 2 | 8 | 104 | 5 | 96 | 5.21e-14 | 70.1 |
| MS.gene75003.t1 | MTR_1g064230 | 40.741 | 81 | 48 | 0 | 6 | 86 | 195 | 275 | 9.19e-15 | 71.2 |
| MS.gene75003.t1 | MTR_3g082650 | 35.644 | 101 | 63 | 1 | 3 | 103 | 14 | 112 | 1.53e-14 | 71.2 |
| MS.gene75003.t1 | MTR_3g055990 | 43.038 | 79 | 43 | 1 | 8 | 86 | 7 | 83 | 2.02e-14 | 71.2 |
| MS.gene75003.t1 | MTR_3g055990 | 36.709 | 79 | 49 | 1 | 8 | 86 | 107 | 184 | 1.15e-11 | 63.2 |
| MS.gene75003.t1 | MTR_3g055990 | 43.038 | 79 | 43 | 1 | 8 | 86 | 7 | 83 | 2.14e-14 | 71.2 |
| MS.gene75003.t1 | MTR_3g055990 | 36.709 | 79 | 49 | 1 | 8 | 86 | 107 | 184 | 1.18e-11 | 63.2 |
| MS.gene75003.t1 | MTR_2g096560 | 33.721 | 86 | 57 | 0 | 1 | 86 | 1 | 86 | 4.54e-14 | 65.1 |
| MS.gene75003.t1 | MTR_7g013740 | 35.443 | 79 | 51 | 0 | 8 | 86 | 41 | 119 | 5.40e-14 | 66.6 |
| MS.gene75003.t1 | MTR_3g103420 | 43.038 | 79 | 43 | 1 | 8 | 86 | 11 | 87 | 9.79e-14 | 68.9 |
| MS.gene75003.t1 | MTR_3g103420 | 31.973 | 147 | 81 | 5 | 8 | 148 | 118 | 251 | 3.99e-12 | 64.3 |
| MS.gene75003.t1 | MTR_6g004810 | 35.577 | 104 | 65 | 1 | 8 | 109 | 134 | 237 | 1.03e-13 | 68.9 |
| MS.gene75003.t1 | MTR_6g004810 | 36.905 | 84 | 51 | 1 | 3 | 86 | 41 | 122 | 3.52e-12 | 64.3 |
| MS.gene75003.t1 | MTR_5g044970 | 37.647 | 85 | 53 | 0 | 1 | 85 | 4 | 88 | 1.39e-13 | 66.2 |
| MS.gene75003.t1 | MTR_5g097580 | 39.241 | 79 | 46 | 1 | 8 | 86 | 7 | 83 | 1.68e-13 | 68.6 |
| MS.gene75003.t1 | MTR_5g097580 | 35.443 | 79 | 50 | 1 | 8 | 86 | 107 | 184 | 1.15e-12 | 66.2 |
| MS.gene75003.t1 | MTR_5g097580 | 39.241 | 79 | 46 | 1 | 8 | 86 | 7 | 83 | 1.73e-13 | 68.6 |
| MS.gene75003.t1 | MTR_5g097580 | 35.443 | 79 | 50 | 1 | 8 | 86 | 107 | 184 | 1.24e-12 | 65.9 |
| MS.gene75003.t1 | MTR_7g088140 | 40.789 | 76 | 44 | 1 | 8 | 83 | 128 | 202 | 1.76e-13 | 68.6 |
| MS.gene75003.t1 | MTR_7g088140 | 40.789 | 76 | 44 | 1 | 8 | 83 | 128 | 202 | 3.37e-13 | 67.8 |
| MS.gene75003.t1 | MTR_4g035310 | 31.132 | 106 | 64 | 2 | 7 | 103 | 16 | 121 | 3.81e-13 | 66.6 |
| MS.gene75003.t1 | MTR_1g045510 | 33.333 | 81 | 54 | 0 | 4 | 84 | 201 | 281 | 3.84e-13 | 66.6 |
| MS.gene75003.t1 | MTR_4g035310 | 31.132 | 106 | 64 | 2 | 7 | 103 | 16 | 121 | 4.20e-13 | 66.6 |
| MS.gene75003.t1 | MTR_5g017280 | 37.349 | 83 | 48 | 2 | 5 | 86 | 2 | 81 | 1.59e-12 | 65.5 |
| MS.gene75003.t1 | MTR_5g017280 | 37.349 | 83 | 48 | 2 | 5 | 86 | 2 | 81 | 1.72e-12 | 65.5 |
| MS.gene75003.t1 | MTR_7g106440 | 39.024 | 82 | 50 | 0 | 7 | 88 | 212 | 293 | 1.94e-12 | 65.1 |
| MS.gene75003.t1 | MTR_3g014000 | 35.632 | 87 | 45 | 2 | 9 | 88 | 36 | 118 | 2.09e-12 | 62.0 |
| MS.gene75003.t1 | MTR_3g084040 | 36.232 | 69 | 43 | 1 | 5 | 73 | 34 | 101 | 3.89e-12 | 60.5 |
| MS.gene75003.t1 | MTR_5g088220 | 38.158 | 76 | 46 | 1 | 8 | 83 | 166 | 240 | 4.72e-12 | 64.3 |
| MS.gene75003.t1 | MTR_5g064120 | 35.897 | 78 | 46 | 1 | 7 | 80 | 16 | 93 | 7.45e-12 | 63.2 |
| MS.gene75003.t1 | MTR_6g477870 | 33.750 | 80 | 53 | 0 | 7 | 86 | 95 | 174 | 9.74e-12 | 61.2 |
| MS.gene75003.t1 | MTR_7g117495 | 35.897 | 78 | 46 | 1 | 7 | 80 | 18 | 95 | 2.08e-11 | 61.6 |
| MS.gene75003.t1 | MTR_7g117495 | 35.897 | 78 | 46 | 1 | 7 | 80 | 18 | 95 | 2.31e-11 | 61.2 |
| MS.gene75003.t1 | MTR_3g116130 | 37.681 | 69 | 39 | 1 | 7 | 71 | 29 | 97 | 3.23e-11 | 61.2 |
| MS.gene75003.t1 | MTR_8g077840 | 30.172 | 116 | 63 | 3 | 1 | 98 | 129 | 244 | 3.93e-11 | 61.6 |
| MS.gene75003.t1 | MTR_1g056520 | 33.766 | 77 | 51 | 0 | 7 | 83 | 207 | 283 | 4.85e-11 | 60.8 |
| MS.gene75003.t1 | MTR_3g116130 | 37.681 | 69 | 39 | 1 | 7 | 71 | 29 | 97 | 7.24e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75003.t1 | AT1G60650 | 62.195 | 164 | 50 | 3 | 3 | 165 | 8 | 160 | 1.55e-60 | 191 |
| MS.gene75003.t1 | AT1G60650 | 62.195 | 164 | 50 | 3 | 3 | 165 | 8 | 160 | 1.55e-60 | 191 |
| MS.gene75003.t1 | AT5G04280 | 54.425 | 226 | 64 | 7 | 1 | 197 | 1 | 216 | 1.77e-59 | 188 |
| MS.gene75003.t1 | AT5G04280 | 51.596 | 188 | 52 | 7 | 39 | 197 | 1 | 178 | 1.52e-40 | 139 |
| MS.gene75003.t1 | AT5G04280 | 51.596 | 188 | 52 | 7 | 39 | 197 | 1 | 178 | 1.52e-40 | 139 |
| MS.gene75003.t1 | AT5G04280 | 51.596 | 188 | 52 | 7 | 39 | 197 | 1 | 178 | 1.52e-40 | 139 |
| MS.gene75003.t1 | AT5G04280 | 51.596 | 188 | 52 | 7 | 39 | 197 | 1 | 178 | 1.52e-40 | 139 |
| MS.gene75003.t1 | AT1G60650 | 56.923 | 130 | 44 | 3 | 37 | 165 | 5 | 123 | 2.65e-38 | 132 |
| MS.gene75003.t1 | AT1G60650 | 57.031 | 128 | 43 | 3 | 39 | 165 | 1 | 117 | 2.06e-37 | 130 |
| MS.gene75003.t1 | AT3G26420 | 40.580 | 207 | 101 | 9 | 1 | 196 | 1 | 196 | 2.89e-34 | 122 |
| MS.gene75003.t1 | AT4G39260 | 46.914 | 81 | 43 | 0 | 6 | 86 | 5 | 85 | 2.14e-23 | 89.7 |
| MS.gene75003.t1 | AT2G21660 | 50.602 | 83 | 41 | 0 | 2 | 84 | 3 | 85 | 1.39e-22 | 89.4 |
| MS.gene75003.t1 | AT2G21660 | 50.602 | 83 | 41 | 0 | 2 | 84 | 3 | 85 | 2.11e-22 | 89.4 |
| MS.gene75003.t1 | AT4G39260 | 46.835 | 79 | 42 | 0 | 6 | 84 | 5 | 83 | 1.95e-21 | 86.7 |
| MS.gene75003.t1 | AT3G23830 | 45.000 | 80 | 44 | 0 | 7 | 86 | 35 | 114 | 1.63e-19 | 80.9 |
| MS.gene75003.t1 | AT3G23830 | 45.000 | 80 | 44 | 0 | 7 | 86 | 35 | 114 | 1.63e-19 | 80.9 |
| MS.gene75003.t1 | AT5G61030 | 36.585 | 82 | 52 | 0 | 5 | 86 | 38 | 119 | 3.85e-18 | 80.9 |
| MS.gene75003.t1 | AT5G61030 | 36.585 | 82 | 52 | 0 | 5 | 86 | 38 | 119 | 3.85e-18 | 80.9 |
| MS.gene75003.t1 | AT2G22100 | 43.678 | 87 | 48 | 1 | 9 | 95 | 165 | 250 | 2.13e-17 | 79.3 |
| MS.gene75003.t1 | AT4G13850 | 40.741 | 81 | 48 | 0 | 6 | 86 | 34 | 114 | 2.72e-17 | 74.7 |
| MS.gene75003.t1 | AT4G13850 | 40.741 | 81 | 48 | 0 | 6 | 86 | 34 | 114 | 4.76e-17 | 74.7 |
| MS.gene75003.t1 | AT4G13850 | 40.741 | 81 | 48 | 0 | 6 | 86 | 34 | 114 | 5.33e-17 | 74.7 |
| MS.gene75003.t1 | AT4G24770 | 44.304 | 79 | 44 | 0 | 8 | 86 | 245 | 323 | 5.96e-17 | 77.8 |
| MS.gene75003.t1 | AT4G24770 | 34.940 | 83 | 54 | 0 | 4 | 86 | 147 | 229 | 3.08e-13 | 67.4 |
| MS.gene75003.t1 | AT4G24770 | 44.304 | 79 | 44 | 0 | 8 | 86 | 245 | 323 | 5.96e-17 | 77.8 |
| MS.gene75003.t1 | AT4G24770 | 34.940 | 83 | 54 | 0 | 4 | 86 | 147 | 229 | 3.08e-13 | 67.4 |
| MS.gene75003.t1 | AT2G19380 | 40.449 | 89 | 52 | 1 | 6 | 94 | 407 | 494 | 1.00e-16 | 78.2 |
| MS.gene75003.t1 | AT2G37220 | 40.000 | 80 | 48 | 0 | 7 | 86 | 204 | 283 | 1.00e-15 | 73.9 |
| MS.gene75003.t1 | AT4G39260 | 45.312 | 64 | 35 | 0 | 6 | 69 | 5 | 68 | 2.06e-15 | 69.3 |
| MS.gene75003.t1 | AT5G06210 | 37.647 | 85 | 51 | 1 | 7 | 89 | 34 | 118 | 2.71e-15 | 70.1 |
| MS.gene75003.t1 | AT5G19960 | 40.909 | 88 | 51 | 1 | 1 | 88 | 1 | 87 | 2.74e-15 | 73.2 |
| MS.gene75003.t1 | AT4G26650 | 29.082 | 196 | 127 | 6 | 3 | 196 | 118 | 303 | 2.89e-15 | 73.6 |
| MS.gene75003.t1 | AT4G26650 | 42.353 | 85 | 47 | 1 | 2 | 86 | 10 | 92 | 7.54e-15 | 72.4 |
| MS.gene75003.t1 | AT4G26650 | 29.082 | 196 | 127 | 6 | 3 | 196 | 115 | 300 | 2.91e-15 | 73.6 |
| MS.gene75003.t1 | AT4G26650 | 42.353 | 85 | 47 | 1 | 2 | 86 | 7 | 89 | 7.58e-15 | 72.4 |
| MS.gene75003.t1 | AT3G53460 | 38.750 | 80 | 49 | 0 | 7 | 86 | 257 | 336 | 6.20e-15 | 72.4 |
| MS.gene75003.t1 | AT3G53460 | 38.750 | 80 | 49 | 0 | 7 | 86 | 257 | 336 | 6.20e-15 | 72.4 |
| MS.gene75003.t1 | AT3G53460 | 38.750 | 80 | 49 | 0 | 7 | 86 | 257 | 336 | 6.20e-15 | 72.4 |
| MS.gene75003.t1 | AT3G07810 | 37.895 | 95 | 54 | 2 | 8 | 102 | 7 | 96 | 7.64e-15 | 72.4 |
| MS.gene75003.t1 | AT3G07810 | 37.895 | 95 | 54 | 2 | 8 | 102 | 7 | 96 | 8.17e-15 | 72.4 |
| MS.gene75003.t1 | AT3G53460 | 38.750 | 80 | 49 | 0 | 7 | 86 | 278 | 357 | 9.04e-15 | 72.0 |
| MS.gene75003.t1 | AT5G50250 | 41.772 | 79 | 46 | 0 | 8 | 86 | 208 | 286 | 1.33e-14 | 70.9 |
| MS.gene75003.t1 | AT5G50250 | 36.585 | 82 | 52 | 0 | 5 | 86 | 111 | 192 | 8.13e-13 | 65.9 |
| MS.gene75003.t1 | AT1G20880 | 37.647 | 85 | 49 | 1 | 7 | 87 | 24 | 108 | 1.44e-14 | 70.5 |
| MS.gene75003.t1 | AT1G20880 | 37.647 | 85 | 49 | 1 | 7 | 87 | 24 | 108 | 1.44e-14 | 70.5 |
| MS.gene75003.t1 | AT1G20880 | 37.647 | 85 | 49 | 1 | 7 | 87 | 24 | 108 | 1.44e-14 | 70.5 |
| MS.gene75003.t1 | AT1G60000 | 40.741 | 81 | 48 | 0 | 4 | 84 | 174 | 254 | 2.90e-14 | 69.7 |
| MS.gene75003.t1 | AT1G17640 | 35.398 | 113 | 62 | 1 | 8 | 120 | 158 | 259 | 3.79e-14 | 70.1 |
| MS.gene75003.t1 | AT1G17640 | 36.709 | 79 | 48 | 1 | 8 | 86 | 67 | 143 | 2.89e-13 | 67.8 |
| MS.gene75003.t1 | AT1G17640 | 35.398 | 113 | 62 | 1 | 8 | 120 | 158 | 259 | 3.79e-14 | 70.1 |
| MS.gene75003.t1 | AT1G17640 | 36.709 | 79 | 48 | 1 | 8 | 86 | 67 | 143 | 2.89e-13 | 67.8 |
| MS.gene75003.t1 | AT1G17640 | 35.398 | 113 | 62 | 1 | 8 | 120 | 158 | 259 | 3.79e-14 | 70.1 |
| MS.gene75003.t1 | AT1G17640 | 36.709 | 79 | 48 | 1 | 8 | 86 | 67 | 143 | 2.89e-13 | 67.8 |
| MS.gene75003.t1 | AT2G33410 | 36.145 | 83 | 51 | 1 | 4 | 86 | 3 | 83 | 5.99e-14 | 69.7 |
| MS.gene75003.t1 | AT1G76460 | 35.294 | 85 | 51 | 1 | 7 | 87 | 24 | 108 | 6.94e-14 | 68.9 |
| MS.gene75003.t1 | AT4G13850 | 37.755 | 98 | 60 | 1 | 6 | 103 | 34 | 130 | 8.57e-14 | 66.2 |
| MS.gene75003.t1 | AT5G55550 | 44.304 | 79 | 42 | 1 | 8 | 86 | 7 | 83 | 1.38e-13 | 68.9 |
| MS.gene75003.t1 | AT5G55550 | 33.333 | 120 | 74 | 4 | 8 | 126 | 111 | 225 | 4.60e-13 | 67.4 |
| MS.gene75003.t1 | AT5G55550 | 44.304 | 79 | 42 | 1 | 8 | 86 | 7 | 83 | 1.38e-13 | 68.9 |
| MS.gene75003.t1 | AT5G55550 | 33.333 | 120 | 74 | 4 | 8 | 126 | 111 | 225 | 4.60e-13 | 67.4 |
| MS.gene75003.t1 | AT5G55550 | 44.304 | 79 | 42 | 1 | 8 | 86 | 7 | 83 | 1.38e-13 | 68.9 |
| MS.gene75003.t1 | AT5G55550 | 33.333 | 120 | 74 | 4 | 8 | 126 | 111 | 225 | 4.60e-13 | 67.4 |
| MS.gene75003.t1 | AT5G55550 | 44.304 | 79 | 42 | 1 | 8 | 86 | 7 | 83 | 1.38e-13 | 68.9 |
| MS.gene75003.t1 | AT5G55550 | 33.333 | 120 | 74 | 4 | 8 | 126 | 111 | 225 | 4.60e-13 | 67.4 |
| MS.gene75003.t1 | AT5G55550 | 44.304 | 79 | 42 | 1 | 8 | 86 | 7 | 83 | 1.38e-13 | 68.9 |
| MS.gene75003.t1 | AT5G55550 | 33.333 | 120 | 74 | 4 | 8 | 126 | 111 | 225 | 4.60e-13 | 67.4 |
| MS.gene75003.t1 | AT5G55550 | 44.304 | 79 | 42 | 1 | 8 | 86 | 7 | 83 | 1.44e-13 | 68.6 |
| MS.gene75003.t1 | AT5G55550 | 33.333 | 120 | 74 | 4 | 8 | 126 | 111 | 225 | 4.71e-13 | 67.4 |
| MS.gene75003.t1 | AT5G55550 | 44.304 | 79 | 42 | 1 | 8 | 86 | 7 | 83 | 1.44e-13 | 68.6 |
| MS.gene75003.t1 | AT5G55550 | 33.333 | 120 | 74 | 4 | 8 | 126 | 111 | 225 | 4.71e-13 | 67.4 |
| MS.gene75003.t1 | AT5G55550 | 44.304 | 79 | 42 | 1 | 8 | 86 | 7 | 83 | 1.44e-13 | 68.6 |
| MS.gene75003.t1 | AT5G55550 | 33.333 | 120 | 74 | 4 | 8 | 126 | 111 | 225 | 4.71e-13 | 67.4 |
| MS.gene75003.t1 | AT5G55550 | 44.304 | 79 | 42 | 1 | 8 | 86 | 7 | 83 | 1.44e-13 | 68.6 |
| MS.gene75003.t1 | AT5G55550 | 33.333 | 120 | 74 | 4 | 8 | 126 | 111 | 225 | 4.71e-13 | 67.4 |
| MS.gene75003.t1 | AT2G27330 | 29.487 | 78 | 55 | 0 | 7 | 84 | 21 | 98 | 1.53e-13 | 64.7 |
| MS.gene75003.t1 | AT2G22090 | 38.202 | 89 | 52 | 2 | 8 | 94 | 105 | 192 | 2.63e-13 | 67.8 |
| MS.gene75003.t1 | AT2G22090 | 38.202 | 89 | 52 | 2 | 8 | 94 | 105 | 192 | 2.92e-13 | 67.4 |
| MS.gene75003.t1 | AT1G74230 | 38.961 | 77 | 46 | 1 | 7 | 83 | 34 | 109 | 3.34e-13 | 67.0 |
| MS.gene75003.t1 | AT1G22330 | 31.858 | 113 | 65 | 3 | 4 | 108 | 14 | 122 | 4.80e-13 | 66.6 |
| MS.gene75003.t1 | AT5G55550 | 33.333 | 120 | 74 | 4 | 8 | 126 | 158 | 272 | 5.97e-13 | 67.0 |
| MS.gene75003.t1 | AT5G55550 | 43.662 | 71 | 37 | 1 | 8 | 75 | 7 | 77 | 8.01e-12 | 63.5 |
| MS.gene75003.t1 | AT5G55550 | 33.333 | 120 | 74 | 4 | 8 | 126 | 158 | 272 | 6.63e-13 | 67.0 |
| MS.gene75003.t1 | AT5G55550 | 43.662 | 71 | 37 | 1 | 8 | 75 | 7 | 77 | 8.07e-12 | 63.5 |
| MS.gene75003.t1 | AT4G13860 | 40.541 | 74 | 44 | 0 | 7 | 80 | 3 | 76 | 9.41e-13 | 61.6 |
| MS.gene75003.t1 | AT5G47620 | 37.805 | 82 | 49 | 1 | 5 | 86 | 4 | 83 | 1.02e-12 | 66.2 |
| MS.gene75003.t1 | AT5G47620 | 37.805 | 82 | 49 | 1 | 5 | 86 | 4 | 83 | 1.02e-12 | 66.2 |
| MS.gene75003.t1 | AT5G47620 | 37.805 | 82 | 49 | 1 | 5 | 86 | 4 | 83 | 1.02e-12 | 66.2 |
| MS.gene75003.t1 | AT2G21690 | 37.500 | 80 | 50 | 0 | 1 | 80 | 1 | 80 | 1.39e-12 | 62.0 |
| MS.gene75003.t1 | AT3G52380 | 36.250 | 80 | 51 | 0 | 7 | 86 | 219 | 298 | 2.57e-12 | 64.7 |
| MS.gene75003.t1 | AT3G52380 | 31.183 | 93 | 64 | 0 | 5 | 97 | 114 | 206 | 2.22e-11 | 62.0 |
| MS.gene75003.t1 | AT4G14300 | 36.986 | 73 | 43 | 1 | 4 | 73 | 3 | 75 | 2.69e-12 | 65.1 |
| MS.gene75003.t1 | AT4G14300 | 36.986 | 73 | 43 | 1 | 4 | 73 | 3 | 75 | 2.69e-12 | 65.1 |
| MS.gene75003.t1 | AT3G13224 | 29.348 | 92 | 65 | 0 | 5 | 96 | 107 | 198 | 2.75e-12 | 64.7 |
| MS.gene75003.t1 | AT3G13224 | 36.782 | 87 | 53 | 1 | 3 | 89 | 15 | 99 | 3.24e-12 | 64.7 |
| MS.gene75003.t1 | AT3G13224 | 29.348 | 92 | 65 | 0 | 5 | 96 | 98 | 189 | 3.85e-12 | 64.3 |
| MS.gene75003.t1 | AT3G13224 | 37.805 | 82 | 49 | 1 | 8 | 89 | 11 | 90 | 1.03e-11 | 63.2 |
| MS.gene75003.t1 | AT3G56860 | 36.905 | 84 | 50 | 2 | 8 | 89 | 141 | 223 | 3.88e-12 | 64.7 |
| MS.gene75003.t1 | AT3G56860 | 36.905 | 84 | 50 | 2 | 8 | 89 | 141 | 223 | 3.88e-12 | 64.7 |
| MS.gene75003.t1 | AT3G56860 | 36.905 | 84 | 50 | 2 | 8 | 89 | 141 | 223 | 3.88e-12 | 64.7 |
| MS.gene75003.t1 | AT3G56860 | 36.905 | 84 | 50 | 2 | 8 | 89 | 141 | 223 | 3.88e-12 | 64.7 |
| MS.gene75003.t1 | AT3G56860 | 36.905 | 84 | 50 | 2 | 8 | 89 | 141 | 223 | 3.88e-12 | 64.7 |
| MS.gene75003.t1 | AT3G56860 | 36.905 | 84 | 50 | 2 | 8 | 89 | 141 | 223 | 3.88e-12 | 64.7 |
| MS.gene75003.t1 | AT3G56860 | 36.905 | 84 | 50 | 2 | 8 | 89 | 141 | 223 | 3.88e-12 | 64.7 |
| MS.gene75003.t1 | AT3G56860 | 36.905 | 84 | 50 | 2 | 8 | 89 | 141 | 223 | 3.88e-12 | 64.7 |
| MS.gene75003.t1 | AT3G56860 | 36.905 | 84 | 50 | 2 | 8 | 89 | 141 | 223 | 3.88e-12 | 64.7 |
| MS.gene75003.t1 | AT3G56860 | 36.905 | 84 | 50 | 2 | 8 | 89 | 141 | 223 | 3.88e-12 | 64.7 |
| MS.gene75003.t1 | AT3G56860 | 36.905 | 84 | 50 | 2 | 8 | 89 | 141 | 223 | 3.88e-12 | 64.7 |
| MS.gene75003.t1 | AT5G47620 | 37.662 | 77 | 45 | 1 | 5 | 78 | 4 | 80 | 4.30e-12 | 64.3 |
| MS.gene75003.t1 | AT1G78260 | 35.065 | 77 | 46 | 1 | 7 | 79 | 17 | 93 | 6.72e-12 | 63.2 |
| MS.gene75003.t1 | AT5G59865 | 33.750 | 80 | 53 | 0 | 7 | 86 | 26 | 105 | 6.79e-12 | 60.1 |
| MS.gene75003.t1 | AT1G18630 | 36.364 | 77 | 49 | 0 | 7 | 83 | 36 | 112 | 7.34e-12 | 61.2 |
| MS.gene75003.t1 | AT2G41060 | 38.158 | 76 | 46 | 1 | 8 | 83 | 129 | 203 | 7.66e-12 | 63.5 |
| MS.gene75003.t1 | AT2G41060 | 38.158 | 76 | 46 | 1 | 8 | 83 | 129 | 203 | 7.66e-12 | 63.5 |
| MS.gene75003.t1 | AT2G41060 | 38.158 | 76 | 46 | 1 | 8 | 83 | 129 | 203 | 7.66e-12 | 63.5 |
| MS.gene75003.t1 | AT1G78260 | 35.065 | 77 | 46 | 1 | 7 | 79 | 17 | 93 | 1.77e-11 | 62.0 |
| MS.gene75003.t1 | AT3G53500 | 33.333 | 126 | 62 | 3 | 7 | 132 | 11 | 114 | 2.81e-11 | 61.6 |
| MS.gene75003.t1 | AT1G13690 | 36.250 | 80 | 51 | 0 | 7 | 86 | 13 | 92 | 3.39e-11 | 59.7 |
| MS.gene75003.t1 | AT3G13224 | 36.905 | 84 | 51 | 1 | 3 | 86 | 15 | 96 | 3.81e-11 | 60.5 |
| MS.gene75003.t1 | AT1G22910 | 32.051 | 78 | 49 | 1 | 7 | 80 | 13 | 90 | 4.02e-11 | 60.5 |
| MS.gene75003.t1 | AT1G22910 | 32.051 | 78 | 49 | 1 | 7 | 80 | 13 | 90 | 4.24e-11 | 60.5 |
| MS.gene75003.t1 | AT1G58470 | 34.568 | 81 | 52 | 1 | 8 | 88 | 121 | 200 | 4.25e-11 | 61.2 |
| MS.gene75003.t1 | AT1G58470 | 34.568 | 81 | 52 | 1 | 8 | 88 | 121 | 200 | 4.25e-11 | 61.2 |
| MS.gene75003.t1 | AT3G46020 | 33.333 | 84 | 56 | 0 | 1 | 84 | 1 | 84 | 7.13e-11 | 57.4 |
| MS.gene75003.t1 | AT5G40490 | 34.000 | 100 | 60 | 3 | 8 | 103 | 43 | 140 | 7.35e-11 | 60.8 |
Find 79 sgRNAs with CRISPR-Local
Find 265 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAGGACGACCACGTGGATT+TGG | 0.274620 | 1.4:-85297249 | MS.gene75003:CDS |
| ATTTGTTGGTGGATTGGGTT+GGG | 0.282263 | 1.4:-85300249 | MS.gene75003:CDS |
| CGTTATGACGGAGGACGTTA+TGG | 0.301748 | 1.4:-85296874 | MS.gene75003:CDS |
| AGGTGATGGTGGTCGTGGTC+GGG | 0.309380 | 1.4:-85296971 | MS.gene75003:CDS |
| GAAATGGATGGACGGGAAAT+TGG | 0.316691 | 1.4:-85297180 | MS.gene75003:CDS |
| AATGTGGGCGTCCAGGGCAC+TGG | 0.342548 | 1.4:-85297017 | MS.gene75003:CDS |
| GAAGCTATGGGGCTGGAGAT+AGG | 0.348816 | 1.4:-85297062 | MS.gene75003:CDS |
| TCGAATATTTGTTGGTGGAT+TGG | 0.355149 | 1.4:-85300255 | MS.gene75003:CDS |
| CAGGACGACCACGTGGATTT+GGG | 0.358578 | 1.4:-85297248 | MS.gene75003:CDS |
| GGTGATGGTGGTCGTGGTCG+GGG | 0.363476 | 1.4:-85296970 | MS.gene75003:CDS |
| GAGGTGATGGTGGTCGTGGT+CGG | 0.367565 | 1.4:-85296972 | MS.gene75003:CDS |
| CGAATATTTGTTGGTGGATT+GGG | 0.369450 | 1.4:-85300254 | MS.gene75003:CDS |
| TCGAAATTGGAAGCAATGTC+TGG | 0.373900 | 1.4:-85300290 | None:intergenic |
| CAATCTCGGGCCCAGTGCCC+TGG | 0.390225 | 1.4:+85297006 | None:intergenic |
| GGTGGTCGTGGTCGGGGTGG+TGG | 0.397614 | 1.4:-85296964 | MS.gene75003:CDS |
| GAAGAAAATCGAATATTTGT+TGG | 0.413061 | 1.4:-85300263 | MS.gene75003:CDS |
| GGAGGATGCAATCAAAGAAA+TGG | 0.419502 | 1.4:-85297196 | MS.gene75003:CDS |
| TGGATTGGGTTGGGATGTTA+CGG | 0.424965 | 1.4:-85300240 | MS.gene75003:CDS |
| GTTATGACGGAGGACGTTAT+GGG | 0.429311 | 1.4:-85296873 | MS.gene75003:CDS |
| TGTTTCAAATGTGGGCGTCC+AGG | 0.430957 | 1.4:-85297024 | MS.gene75003:CDS |
| ACGGAGGACGTTATGGGGAT+AGG | 0.436200 | 1.4:-85296867 | MS.gene75003:CDS |
| ATCATGATGGAAAGGGATAC+AGG | 0.443231 | 1.4:-85297267 | MS.gene75003:CDS |
| CGGGTGGTAGGGGAAGCTAT+GGG | 0.448997 | 1.4:-85297074 | MS.gene75003:CDS |
| GCCCGAGATTGTCCTTTGGC+AGG | 0.452013 | 1.4:-85296994 | MS.gene75003:CDS |
| TCGGGTGGTAGGGGAAGCTA+TGG | 0.455756 | 1.4:-85297075 | MS.gene75003:CDS |
| CGGAGGACGTTATGGGGATA+GGG | 0.457724 | 1.4:-85296866 | MS.gene75003:CDS |
| CTGGGCCCGAGATTGTCCTT+TGG | 0.458404 | 1.4:-85296998 | MS.gene75003:CDS |
| TCCTGCCAAAGGACAATCTC+GGG | 0.464866 | 1.4:+85296993 | None:intergenic |
| AACAAGGCACAGCCCAGGAT+GGG | 0.467319 | 1.4:-85297138 | MS.gene75003:CDS |
| GATGGTGGTCGTGGTCGGGG+TGG | 0.472270 | 1.4:-85296967 | MS.gene75003:CDS |
| TCTTCACGTCCTAGGTTTGG+AGG | 0.474346 | 1.4:-85296934 | MS.gene75003:CDS |
| AAGCTATGGGGCTGGAGATA+GGG | 0.478531 | 1.4:-85297061 | MS.gene75003:CDS |
| TGTCCTTTGGCAGGAGGTGA+TGG | 0.487069 | 1.4:-85296985 | MS.gene75003:CDS |
| GGGTGGTAGGGGAAGCTATG+GGG | 0.488887 | 1.4:-85297073 | MS.gene75003:CDS |
| ATGTGGGCGTCCAGGGCACT+GGG | 0.494969 | 1.4:-85297016 | MS.gene75003:CDS |
| GAAAATCGAATATTTGTTGG+TGG | 0.498286 | 1.4:-85300260 | MS.gene75003:CDS |
| GGCTGGAGATAGGGTAGGAC+AGG | 0.498804 | 1.4:-85297052 | MS.gene75003:CDS |
| ACAAGGCACAGCCCAGGATG+GGG | 0.498851 | 1.4:-85297137 | MS.gene75003:CDS |
| TATTTGTTGGTGGATTGGGT+TGG | 0.502918 | 1.4:-85300250 | MS.gene75003:CDS |
| CTTCACGTCCTAGGTTTGGA+GGG | 0.505875 | 1.4:-85296933 | MS.gene75003:CDS |
| CGGCAAAATTCTCGAATGCC+AGG | 0.513653 | 1.4:-85300186 | MS.gene75003:intron |
| GTTTCAAATGTGGGCGTCCA+GGG | 0.516565 | 1.4:-85297023 | MS.gene75003:CDS |
| CAAGGCACAGCCCAGGATGG+GGG | 0.520072 | 1.4:-85297136 | MS.gene75003:CDS |
| TCCTGTAGATCATGATGGAA+AGG | 0.523083 | 1.4:-85297275 | MS.gene75003:intron |
| CAACAAGGCACAGCCCAGGA+TGG | 0.523273 | 1.4:-85297139 | MS.gene75003:CDS |
| CCTGTAGATCATGATGGAAA+GGG | 0.526313 | 1.4:-85297274 | MS.gene75003:intron |
| TTCACGTCCTAGGTTTGGAG+GGG | 0.528644 | 1.4:-85296932 | MS.gene75003:CDS |
| GCAGGAGGTGATGGTGGTCG+TGG | 0.530483 | 1.4:-85296976 | MS.gene75003:CDS |
| AATCAAAGAAATGGATGGAC+GGG | 0.530859 | 1.4:-85297187 | MS.gene75003:CDS |
| GGTAGGGGAAGCTATGGGGC+TGG | 0.536168 | 1.4:-85297069 | MS.gene75003:CDS |
| GGCCACTATACTTGTAGTCT+CGG | 0.540771 | 1.4:+85296830 | None:intergenic |
| AACCGAGACTACAAGTATAG+TGG | 0.547514 | 1.4:-85296832 | MS.gene75003:CDS |
| GTTCTTCCTGTAGATCATGA+TGG | 0.555995 | 1.4:-85297280 | MS.gene75003:intron |
| CTCCTGCCAAAGGACAATCT+CGG | 0.558163 | 1.4:+85296992 | None:intergenic |
| AAGGCACAGCCCAGGATGGG+GGG | 0.560024 | 1.4:-85297135 | MS.gene75003:CDS |
| CGAGATTGTCCTTTGGCAGG+AGG | 0.560589 | 1.4:-85296991 | MS.gene75003:CDS |
| CAGGATGACTGTTTCAAATG+TGG | 0.561074 | 1.4:-85297033 | MS.gene75003:CDS |
| AGGTTTGGAGGGGATCGCCT+TGG | 0.561107 | 1.4:-85296922 | MS.gene75003:CDS |
| GTGATCGCTATGCTAGTGAC+AGG | 0.568218 | 1.4:-85296807 | None:intergenic |
| CAATCAAAGAAATGGATGGA+CGG | 0.577207 | 1.4:-85297188 | MS.gene75003:CDS |
| CAGTCAACAAGGCACAGCCC+AGG | 0.578143 | 1.4:-85297143 | MS.gene75003:CDS |
| TTCAGACCGTCGGGGAATGG+AGG | 0.579926 | 1.4:-85297214 | MS.gene75003:CDS |
| AGGCGATCCCCTCCAAACCT+AGG | 0.586100 | 1.4:+85296925 | None:intergenic |
| AGGATGACTGTTTCAAATGT+GGG | 0.586550 | 1.4:-85297032 | MS.gene75003:CDS |
| TGTCACTAGCATAGCGATCA+CGG | 0.597431 | 1.4:+85296809 | None:intergenic |
| GATGCAATCAAAGAAATGGA+TGG | 0.610297 | 1.4:-85297192 | MS.gene75003:CDS |
| TACATTGATGATCGTTATGA+CGG | 0.612196 | 1.4:-85296886 | MS.gene75003:CDS |
| TTGCATCCTCCATTCCCCGA+CGG | 0.618468 | 1.4:+85297208 | None:intergenic |
| TTATGACGGAGGACGTTATG+GGG | 0.626407 | 1.4:-85296872 | MS.gene75003:CDS |
| GCAGACCAACGTTACAGAGG+TGG | 0.626631 | 1.4:-85297105 | MS.gene75003:CDS |
| CCACCATCACCTCCTGCCAA+AGG | 0.626760 | 1.4:+85296982 | None:intergenic |
| TATGGGGCTGGAGATAGGGT+AGG | 0.643765 | 1.4:-85297057 | MS.gene75003:CDS |
| CCTTTGGCAGGAGGTGATGG+TGG | 0.645070 | 1.4:-85296982 | MS.gene75003:CDS |
| TCGCATCATCTCAGTCAACA+AGG | 0.646358 | 1.4:-85297154 | MS.gene75003:CDS |
| TGTATCGCTCACGTTCACCA+AGG | 0.663256 | 1.4:+85296905 | None:intergenic |
| GATGCAGACCAACGTTACAG+AGG | 0.693509 | 1.4:-85297108 | MS.gene75003:CDS |
| AGGGATACAGGACGACCACG+TGG | 0.710858 | 1.4:-85297255 | MS.gene75003:CDS |
| ATTGATGATCGTTATGACGG+AGG | 0.731591 | 1.4:-85296883 | MS.gene75003:CDS |
| GTAATAAACCCAAATCCACG+TGG | 0.753361 | 1.4:+85297240 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTGTTTAAATTTATATCA+TGG | - | chr1.4:85298889-85298908 | MS.gene75003:intron | 10.0% |
| !!! | ATAATTTTATATAATTTGGA+AGG | - | chr1.4:85297702-85297721 | MS.gene75003:intron | 10.0% |
| !! | AAATTGTATCTATAATTGAT+GGG | - | chr1.4:85299388-85299407 | MS.gene75003:intron | 15.0% |
| !! | ACAACAACTAAAAAAAAAAA+TGG | + | chr1.4:85296984-85297003 | None:intergenic | 15.0% |
| !! | AGAAAATTATATGTATACTT+AGG | - | chr1.4:85299343-85299362 | MS.gene75003:intron | 15.0% |
| !! | AGTAATTCAAAAAAATCATT+CGG | + | chr1.4:85298204-85298223 | None:intergenic | 15.0% |
| !! | ATTGAAGAATTTATTATGTT+TGG | - | chr1.4:85297397-85297416 | MS.gene75003:intron | 15.0% |
| !! | TAAATTGTATCTATAATTGA+TGG | - | chr1.4:85299387-85299406 | MS.gene75003:intron | 15.0% |
| !!! | ATTTTTTTTCTTTGTTTTTC+TGG | - | chr1.4:85297431-85297450 | MS.gene75003:intron | 15.0% |
| !!! | TTCAAAATTATTGTAGTTTT+TGG | - | chr1.4:85297172-85297191 | MS.gene75003:CDS | 15.0% |
| !! | AAACAAGCATAAAAAAATAC+CGG | + | chr1.4:85299208-85299227 | None:intergenic | 20.0% |
| !! | AAACTACTCAAAATTTCTAT+AGG | + | chr1.4:85299252-85299271 | None:intergenic | 20.0% |
| !! | AATTGTATCTATAATTGATG+GGG | - | chr1.4:85299389-85299408 | MS.gene75003:intron | 20.0% |
| !! | ACAAATAAACAGCATATATA+AGG | + | chr1.4:85298755-85298774 | None:intergenic | 20.0% |
| !! | ACTTCAAAATTAGCTATAAT+AGG | + | chr1.4:85298181-85298200 | None:intergenic | 20.0% |
| !! | AGATAATTGTTGTCAAATAT+GGG | - | chr1.4:85298976-85298995 | MS.gene75003:intron | 20.0% |
| !! | ATAATAAAACAAAACAAAGC+TGG | + | chr1.4:85297131-85297150 | None:intergenic | 20.0% |
| !! | GATACTAAGATTATATTTGT+TGG | - | chr1.4:85298862-85298881 | MS.gene75003:intron | 20.0% |
| !! | TATAATTTGGAAGGAATATT+TGG | - | chr1.4:85297711-85297730 | MS.gene75003:intron | 20.0% |
| !! | TCGAAAAAAAAAATATACTC+TGG | - | chr1.4:85298619-85298638 | MS.gene75003:intron | 20.0% |
| !! | TGCAAATTATAATCAATCTT+AGG | + | chr1.4:85298474-85298493 | None:intergenic | 20.0% |
| !! | TGTTTATAAATTTAATGTCC+CGG | - | chr1.4:85299186-85299205 | MS.gene75003:intron | 20.0% |
| !! | TTACATGAAAACTTCAAAAA+TGG | + | chr1.4:85297107-85297126 | None:intergenic | 20.0% |
| !! | TTATTCATATTTCCATTATC+TGG | - | chr1.4:85299766-85299785 | MS.gene75003:intron | 20.0% |
| !!! | AGAATTTTATTTTCCTGAAT+GGG | - | chr1.4:85297023-85297042 | MS.gene75003:CDS | 20.0% |
| !!! | TTATATATGCTGTTTATTTG+TGG | - | chr1.4:85298754-85298773 | MS.gene75003:intron | 20.0% |
| ! | AAACAAATTGGGGAAAATAA+AGG | + | chr1.4:85296942-85296961 | None:intergenic | 25.0% |
| ! | AACAAATTGGGGAAAATAAA+GGG | + | chr1.4:85296941-85296960 | None:intergenic | 25.0% |
| ! | AACAAGCATAAAAAAATACC+GGG | + | chr1.4:85299207-85299226 | None:intergenic | 25.0% |
| ! | GAAGAAAATCGAATATTTGT+TGG | - | chr1.4:85296820-85296839 | MS.gene75003:CDS | 25.0% |
| ! | GAGATAATTGTTGTCAAATA+TGG | - | chr1.4:85298975-85298994 | MS.gene75003:intron | 25.0% |
| ! | TACTATTCTGATGTAAAAAG+TGG | + | chr1.4:85298229-85298248 | None:intergenic | 25.0% |
| ! | TCAATTCAACAAACAAATAC+AGG | + | chr1.4:85297792-85297811 | None:intergenic | 25.0% |
| ! | TCTGATAAAATAGTAGTTTG+TGG | - | chr1.4:85297553-85297572 | MS.gene75003:intron | 25.0% |
| ! | TGTGATACTTGTCATAAAAT+TGG | - | chr1.4:85298673-85298692 | MS.gene75003:intron | 25.0% |
| ! | TTATATGTATACTTAGGAAC+TGG | - | chr1.4:85299349-85299368 | MS.gene75003:intron | 25.0% |
| ! | TTGAAATTTATGCCAGATAA+TGG | + | chr1.4:85299781-85299800 | None:intergenic | 25.0% |
| !! | AAAATAGTAGTTTGTGGTAA+AGG | - | chr1.4:85297559-85297578 | MS.gene75003:intron | 25.0% |
| !! | AAATTCAGCTTTTATCACAA+TGG | - | chr1.4:85297223-85297242 | MS.gene75003:CDS | 25.0% |
| !! | ACCTTTTCTTAAAACTGTTA+AGG | - | chr1.4:85297293-85297312 | MS.gene75003:intron | 25.0% |
| !! | AGATACAATTTAAGTTACCA+AGG | + | chr1.4:85299379-85299398 | None:intergenic | 25.0% |
| !! | ATTGATTATAATTTGCACCT+GGG | - | chr1.4:85298477-85298496 | MS.gene75003:intron | 25.0% |
| !!! | ACCTTAACAGTTTTAAGAAA+AGG | + | chr1.4:85297297-85297316 | None:intergenic | 25.0% |
| !!! | AGTTTTGCATTAGTTTTGAA+TGG | - | chr1.4:85298263-85298282 | MS.gene75003:intron | 25.0% |
| !!! | GAGAATTTTATTTTCCTGAA+TGG | - | chr1.4:85297022-85297041 | MS.gene75003:CDS | 25.0% |
| !!! | TCAGAATAGTATTGATTAGT+TGG | - | chr1.4:85298238-85298257 | MS.gene75003:intron | 25.0% |
| AACAGATTTACTACTAGAAG+AGG | + | chr1.4:85297850-85297869 | None:intergenic | 30.0% | |
| ACAAGATATAAGTAGAAGGT+AGG | + | chr1.4:85299534-85299553 | None:intergenic | 30.0% | |
| AGAAACTTGTGCATTGAATA+AGG | + | chr1.4:85299144-85299163 | None:intergenic | 30.0% | |
| ATAAGATCATACAAGCAAGA+TGG | + | chr1.4:85299632-85299651 | None:intergenic | 30.0% | |
| ATTCAATGCACAAGTTTCTA+TGG | - | chr1.4:85299145-85299164 | MS.gene75003:intron | 30.0% | |
| CAAGACAAGATATAAGTAGA+AGG | + | chr1.4:85299538-85299557 | None:intergenic | 30.0% | |
| CAGGAAAGAATACTTCAATA+TGG | + | chr1.4:85297773-85297792 | None:intergenic | 30.0% | |
| CTGAGAATTGAAACAAATTG+GGG | + | chr1.4:85296952-85296971 | None:intergenic | 30.0% | |
| GAATATTTGGCAGTAAGATT+GGG | - | chr1.4:85297724-85297743 | MS.gene75003:intron | 30.0% | |
| GATTGTAGTGAATTATAACG+AGG | - | chr1.4:85297901-85297920 | MS.gene75003:intron | 30.0% | |
| GCTGAGAATTGAAACAAATT+GGG | + | chr1.4:85296953-85296972 | None:intergenic | 30.0% | |
| GTTGAGATATGTTGAATTCA+GGG | - | chr1.4:85297608-85297627 | MS.gene75003:intron | 30.0% | |
| TACAAGCAAGATGGATAAAA+TGG | + | chr1.4:85299623-85299642 | None:intergenic | 30.0% | |
| TATCTATAATTGATGGGGAT+GGG | - | chr1.4:85299394-85299413 | MS.gene75003:intron | 30.0% | |
| TCATACATACAAACAAGATG+AGG | + | chr1.4:85299681-85299700 | None:intergenic | 30.0% | |
| TCTATCAGCTGTTTATGTTA+GGG | - | chr1.4:85297316-85297335 | MS.gene75003:intron | 30.0% | |
| TGCTGAGAATTGAAACAAAT+TGG | + | chr1.4:85296954-85296973 | None:intergenic | 30.0% | |
| TTGTAGTAATTGTTGTCACA+GGG | - | chr1.4:85297000-85297019 | MS.gene75003:CDS | 30.0% | |
| TTTATGTAAGCGTCATTCTT+TGG | - | chr1.4:85299225-85299244 | MS.gene75003:intron | 30.0% | |
| ! | AATTTCAACTTGTTCCATTC+TGG | + | chr1.4:85298924-85298943 | None:intergenic | 30.0% |
| ! | AGTTTTCAAATCCAAAGCAT+TGG | - | chr1.4:85298080-85298099 | MS.gene75003:intron | 30.0% |
| ! | GAAAATCGAATATTTGTTGG+TGG | - | chr1.4:85296823-85296842 | MS.gene75003:CDS | 30.0% |
| ! | GATTGATTATAATTTGCACC+TGG | - | chr1.4:85298476-85298495 | MS.gene75003:intron | 30.0% |
| ! | TACATTGATGATCGTTATGA+CGG | - | chr1.4:85300197-85300216 | MS.gene75003:CDS | 30.0% |
| ! | TATTTTCTGCTAAAATGTCG+AGG | - | chr1.4:85298339-85298358 | MS.gene75003:intron | 30.0% |
| ! | TCTACTGATTGAGAAAATAG+CGG | - | chr1.4:85298800-85298819 | MS.gene75003:intron | 30.0% |
| ! | TCTTGTTTGTATGTATGATG+TGG | - | chr1.4:85299683-85299702 | MS.gene75003:intron | 30.0% |
| ! | TGAAATTTTTGCTCAGATTG+TGG | - | chr1.4:85298937-85298956 | MS.gene75003:intron | 30.0% |
| ! | TTATTACATTTTCAGACCGT+CGG | - | chr1.4:85299859-85299878 | MS.gene75003:intron | 30.0% |
| ! | TTGATTATAATTTGCACCTG+GGG | - | chr1.4:85298478-85298497 | MS.gene75003:intron | 30.0% |
| ! | TTTTATGACAAGTATCACAG+AGG | + | chr1.4:85298672-85298691 | None:intergenic | 30.0% |
| !! | ATGATGTGGTTCTATTTTAC+TGG | - | chr1.4:85299697-85299716 | MS.gene75003:intron | 30.0% |
| !! | GTTTTCAAATCCAAAGCATT+GGG | - | chr1.4:85298081-85298100 | MS.gene75003:intron | 30.0% |
| !!! | AAATTGCATTGCTGTTTTAG+TGG | - | chr1.4:85299275-85299294 | MS.gene75003:intron | 30.0% |
| !!! | TTTTATTTTCCTGAATGGGT+TGG | - | chr1.4:85297027-85297046 | MS.gene75003:CDS | 30.0% |
| AAATAATTCTCGAGCAGACA+TGG | + | chr1.4:85298324-85298343 | None:intergenic | 35.0% | |
| AATCAAAGAAATGGATGGAC+GGG | - | chr1.4:85299896-85299915 | MS.gene75003:intron | 35.0% | |
| AATTGGGGAAAATAAAGGGT+TGG | + | chr1.4:85296937-85296956 | None:intergenic | 35.0% | |
| AGGATGACTGTTTCAAATGT+GGG | - | chr1.4:85300051-85300070 | MS.gene75003:intron | 35.0% | |
| AGTAACTGTATCTCATCAGT+TGG | - | chr1.4:85298151-85298170 | MS.gene75003:intron | 35.0% | |
| ATCTATAATTGATGGGGATG+GGG | - | chr1.4:85299395-85299414 | MS.gene75003:intron | 35.0% | |
| ATTGTTGTCAAATATGGGCT+TGG | - | chr1.4:85298981-85299000 | MS.gene75003:intron | 35.0% | |
| CAAACAAGATGAGGATACAA+TGG | + | chr1.4:85299672-85299691 | None:intergenic | 35.0% | |
| CAATCAAAGAAATGGATGGA+CGG | - | chr1.4:85299895-85299914 | MS.gene75003:intron | 35.0% | |
| CATTAATACCCATCTGCTAT+GGG | + | chr1.4:85297931-85297950 | None:intergenic | 35.0% | |
| CTTGCTTGTATGATCTTATC+TGG | - | chr1.4:85299633-85299652 | MS.gene75003:intron | 35.0% | |
| GATGCAATCAAAGAAATGGA+TGG | - | chr1.4:85299891-85299910 | MS.gene75003:intron | 35.0% | |
| GATTTACTACTAGAAGAGGA+AGG | + | chr1.4:85297846-85297865 | None:intergenic | 35.0% | |
| GCAGAAGTGAAATCAATACT+TGG | - | chr1.4:85298722-85298741 | MS.gene75003:intron | 35.0% | |
| GCAGAATTACATGAAATGCT+AGG | - | chr1.4:85298387-85298406 | MS.gene75003:intron | 35.0% | |
| GGAATATTTGGCAGTAAGAT+TGG | - | chr1.4:85297723-85297742 | MS.gene75003:intron | 35.0% | |
| GGTTGAGATATGTTGAATTC+AGG | - | chr1.4:85297607-85297626 | MS.gene75003:intron | 35.0% | |
| GTATCTATAATTGATGGGGA+TGG | - | chr1.4:85299393-85299412 | MS.gene75003:intron | 35.0% | |
| GTCTATCAGCTGTTTATGTT+AGG | - | chr1.4:85297315-85297334 | MS.gene75003:intron | 35.0% | |
| GTTGTAGTAATTGTTGTCAC+AGG | - | chr1.4:85296999-85297018 | MS.gene75003:CDS | 35.0% | |
| GTTTATTTGTGGCTGCAATT+TGG | - | chr1.4:85298765-85298784 | MS.gene75003:intron | 35.0% | |
| TACTAATGAACCTTGTCTCT+CGG | + | chr1.4:85297682-85297701 | None:intergenic | 35.0% | |
| TTGTTGTCAAATATGGGCTT+GGG | - | chr1.4:85298982-85299001 | MS.gene75003:intron | 35.0% | |
| ! | AATGCTGTTTGCATGTTTCA+CGG | - | chr1.4:85299100-85299119 | MS.gene75003:intron | 35.0% |
| ! | GAACATGCTTTTGATCGTTA+CGG | - | chr1.4:85296877-85296896 | MS.gene75003:CDS | 35.0% |
| ! | GGTTGCAGAAAGTACATAAA+AGG | + | chr1.4:85297985-85298004 | None:intergenic | 35.0% |
| ! | GTTAGGATGCACTCTATTTT+TGG | - | chr1.4:85297354-85297373 | MS.gene75003:intron | 35.0% |
| ! | TATTACATTTTCAGACCGTC+GGG | - | chr1.4:85299860-85299879 | MS.gene75003:intron | 35.0% |
| ! | TCGAATATTTGTTGGTGGAT+TGG | - | chr1.4:85296828-85296847 | MS.gene75003:CDS | 35.0% |
| ! | TGCAGAAAGTACATAAAAGG+CGG | + | chr1.4:85297982-85298001 | None:intergenic | 35.0% |
| ! | TTACAGAGGTGGTTTTTCTT+CGG | - | chr1.4:85299989-85300008 | MS.gene75003:intron | 35.0% |
| ! | TTCAGCTTTTATCACAATGG+TGG | - | chr1.4:85297226-85297245 | MS.gene75003:CDS | 35.0% |
| !! | CGAATATTTGTTGGTGGATT+GGG | - | chr1.4:85296829-85296848 | MS.gene75003:CDS | 35.0% |
| !!! | ACCTTTTGATCTTTGAGATG+CGG | - | chr1.4:85297467-85297486 | MS.gene75003:intron | 35.0% |
| AAAAACCACCTCTGTAACGT+TGG | + | chr1.4:85299986-85300005 | None:intergenic | 40.0% | |
| AAAGACAACACGCAAGTTAC+AGG | + | chr1.4:85298592-85298611 | None:intergenic | 40.0% | |
| AAATTGGAGCTGCAACATAG+TGG | - | chr1.4:85298689-85298708 | MS.gene75003:intron | 40.0% | |
| AACCGAGACTACAAGTATAG+TGG | - | chr1.4:85300251-85300270 | MS.gene75003:CDS | 40.0% | |
| ACCGCATCTCAAAGATCAAA+AGG | + | chr1.4:85297471-85297490 | None:intergenic | 40.0% | |
| AGATCAGACTGATATTCCCT+TGG | + | chr1.4:85297646-85297665 | None:intergenic | 40.0% | |
| AGATCCATACACACAAGATG+AGG | + | chr1.4:85299578-85299597 | None:intergenic | 40.0% | |
| AGGGATATGAAAGTAGCCAA+GGG | - | chr1.4:85297627-85297646 | MS.gene75003:intron | 40.0% | |
| AGTAAGATTGGGCTGAAAAC+TGG | - | chr1.4:85297735-85297754 | MS.gene75003:intron | 40.0% | |
| CACACAAGATGAGGATACAA+TGG | + | chr1.4:85299569-85299588 | None:intergenic | 40.0% | |
| CAGGATGACTGTTTCAAATG+TGG | - | chr1.4:85300050-85300069 | MS.gene75003:intron | 40.0% | |
| CAGTTACTCAGAATGAAGAG+AGG | + | chr1.4:85298139-85298158 | None:intergenic | 40.0% | |
| CCATAGCAGATGGGTATTAA+TGG | - | chr1.4:85297929-85297948 | MS.gene75003:intron | 40.0% | |
| CCATTAATACCCATCTGCTA+TGG | + | chr1.4:85297932-85297951 | None:intergenic | 40.0% | |
| GAACACAGAAGTAAGTTGTC+TGG | - | chr1.4:85299056-85299075 | MS.gene75003:intron | 40.0% | |
| GGAGGATGCAATCAAAGAAA+TGG | - | chr1.4:85299887-85299906 | MS.gene75003:intron | 40.0% | |
| GTAATAAACCCAAATCCACG+TGG | + | chr1.4:85299846-85299865 | None:intergenic | 40.0% | |
| GTATCCTCATCTTGTGTGTA+TGG | - | chr1.4:85299571-85299590 | MS.gene75003:intron | 40.0% | |
| GTGTTCACCAAGTCAGTTAA+GGG | - | chr1.4:85298361-85298380 | MS.gene75003:intron | 40.0% | |
| GTTCTTCCTGTAGATCATGA+TGG | - | chr1.4:85299803-85299822 | MS.gene75003:intron | 40.0% | |
| TACATAAAAGGCGGAAGCAA+AGG | + | chr1.4:85297973-85297992 | None:intergenic | 40.0% | |
| TCTATAATTGATGGGGATGG+GGG | - | chr1.4:85299396-85299415 | MS.gene75003:intron | 40.0% | |
| TGTTCACCAAGTCAGTTAAG+GGG | - | chr1.4:85298362-85298381 | MS.gene75003:intron | 40.0% | |
| TTACTACTAGAAGAGGAAGG+AGG | + | chr1.4:85297843-85297862 | None:intergenic | 40.0% | |
| ! | AGAATACTAGCAAAAGGTGC+TGG | - | chr1.4:85298504-85298523 | MS.gene75003:intron | 40.0% |
| ! | ATCATGATGGAAAGGGATAC+AGG | - | chr1.4:85299816-85299835 | MS.gene75003:intron | 40.0% |
| ! | ATTACATTTTCAGACCGTCG+GGG | - | chr1.4:85299861-85299880 | MS.gene75003:intron | 40.0% |
| ! | ATTATAATTTGCACCTGGGG+AGG | - | chr1.4:85298481-85298500 | MS.gene75003:intron | 40.0% |
| ! | ATTGATGATCGTTATGACGG+AGG | - | chr1.4:85300200-85300219 | MS.gene75003:CDS | 40.0% |
| ! | CCTGTAGATCATGATGGAAA+GGG | - | chr1.4:85299809-85299828 | MS.gene75003:intron | 40.0% |
| ! | GCAATTGCTGCTTAGATAGT+GGG | - | chr1.4:85298111-85298130 | MS.gene75003:intron | 40.0% |
| ! | GTTCATTTTCTTCACGTCCT+AGG | - | chr1.4:85300141-85300160 | MS.gene75003:intron | 40.0% |
| ! | TACAGAGGTGGTTTTTCTTC+GGG | - | chr1.4:85299990-85300009 | MS.gene75003:intron | 40.0% |
| ! | TCCTGTAGATCATGATGGAA+AGG | - | chr1.4:85299808-85299827 | MS.gene75003:intron | 40.0% |
| ! | TTTTCTTCACGTCCTAGGTT+TGG | - | chr1.4:85300146-85300165 | MS.gene75003:intron | 40.0% |
| !! | ATCCAAAGCATTGGGATCAT+AGG | - | chr1.4:85298089-85298108 | MS.gene75003:intron | 40.0% |
| !! | ATTTGTTGGTGGATTGGGTT+GGG | - | chr1.4:85296834-85296853 | MS.gene75003:CDS | 40.0% |
| !! | TATTTGTTGGTGGATTGGGT+TGG | - | chr1.4:85296833-85296852 | MS.gene75003:CDS | 40.0% |
| !! | TTTGATCTTTGAGATGCGGT+GGG | - | chr1.4:85297471-85297490 | MS.gene75003:intron | 40.0% |
| !!! | GATTTTGATTCTCGACACTG+CGG | - | chr1.4:85297198-85297217 | MS.gene75003:CDS | 40.0% |
| !!! | TTTTGATCTTTGAGATGCGG+TGG | - | chr1.4:85297470-85297489 | MS.gene75003:intron | 40.0% |
| AATCTGACACCAACCCATTC+AGG | + | chr1.4:85297039-85297058 | None:intergenic | 45.0% | |
| CAATCTAGGTCACGAAATCG+TGG | + | chr1.4:85297264-85297283 | None:intergenic | 45.0% | |
| CAGGGATATGAAAGTAGCCA+AGG | - | chr1.4:85297626-85297645 | MS.gene75003:intron | 45.0% | |
| CATGGAGTCATGAACCAGAA+TGG | - | chr1.4:85298907-85298926 | MS.gene75003:intron | 45.0% | |
| CCCTTTCCATCATGATCTAC+AGG | + | chr1.4:85299812-85299831 | None:intergenic | 45.0% | |
| CGATTTCGTGACCTAGATTG+CGG | - | chr1.4:85297264-85297283 | MS.gene75003:CDS | 45.0% | |
| GAAATGGATGGACGGGAAAT+TGG | - | chr1.4:85299903-85299922 | MS.gene75003:intron | 45.0% | |
| GAGGAACGATGTCAATGCAA+TGG | - | chr1.4:85298558-85298577 | MS.gene75003:intron | 45.0% | |
| GAGGTATACCCATAGCAGAT+GGG | - | chr1.4:85297920-85297939 | MS.gene75003:intron | 45.0% | |
| GCTCAAGGTGGAGATTAGTA+TGG | - | chr1.4:85297586-85297605 | MS.gene75003:intron | 45.0% | |
| GGCCACTATACTTGTAGTCT+CGG | + | chr1.4:85300256-85300275 | None:intergenic | 45.0% | |
| GGGAGGAGAATACTAGCAAA+AGG | - | chr1.4:85298498-85298517 | MS.gene75003:intron | 45.0% | |
| GGTGTTCACCAAGTCAGTTA+AGG | - | chr1.4:85298360-85298379 | MS.gene75003:intron | 45.0% | |
| TACTTTCTGCAACCCATAGC+AGG | - | chr1.4:85297991-85298010 | MS.gene75003:intron | 45.0% | |
| TCGCATCATCTCAGTCAACA+AGG | - | chr1.4:85299929-85299948 | MS.gene75003:intron | 45.0% | |
| TGCCTATGATCCCAATGCTT+TGG | + | chr1.4:85298094-85298113 | None:intergenic | 45.0% | |
| TGCTATTGTTCCGAGAGACA+AGG | - | chr1.4:85297669-85297688 | MS.gene75003:intron | 45.0% | |
| TGGTCATACACACCTGCTAT+GGG | + | chr1.4:85298006-85298025 | None:intergenic | 45.0% | |
| TGTCACTAGCATAGCGATCA+CGG | + | chr1.4:85300277-85300296 | None:intergenic | 45.0% | |
| TGTGGTAAAGGTAGAGCTCA+AGG | - | chr1.4:85297571-85297590 | MS.gene75003:intron | 45.0% | |
| TTGGTCATACACACCTGCTA+TGG | + | chr1.4:85298007-85298026 | None:intergenic | 45.0% | |
| ! | ACTTAGGAACTGGTTCTCCT+TGG | - | chr1.4:85299359-85299378 | MS.gene75003:intron | 45.0% |
| ! | AGCAGCACTAGAGTACTCAT+AGG | + | chr1.4:85298052-85298071 | None:intergenic | 45.0% |
| ! | GGCAATTGCTGCTTAGATAG+TGG | - | chr1.4:85298110-85298129 | MS.gene75003:intron | 45.0% |
| ! | GTTAGGGAAGTTGCGAGTTT+TGG | - | chr1.4:85297332-85297351 | MS.gene75003:intron | 45.0% |
| ! | GTTATGACGGAGGACGTTAT+GGG | - | chr1.4:85300210-85300229 | MS.gene75003:CDS | 45.0% |
| ! | TAAAGGGTTGGCAGAGAAAG+AGG | + | chr1.4:85296925-85296944 | None:intergenic | 45.0% |
| ! | TGGTTTTTCTTCGGGTGGTA+GGG | - | chr1.4:85299998-85300017 | MS.gene75003:intron | 45.0% |
| ! | TTATGACGGAGGACGTTATG+GGG | - | chr1.4:85300211-85300230 | MS.gene75003:CDS | 45.0% |
| !! | TGGATTGGGTTGGGATGTTA+CGG | - | chr1.4:85296843-85296862 | MS.gene75003:CDS | 45.0% |
| !!! | GGAAGTTGCGAGTTTTGGTT+AGG | - | chr1.4:85297337-85297356 | MS.gene75003:intron | 45.0% |
| !!! | AGTAATAATTTTATATAATT+TGG | - | chr1.4:85297698-85297717 | MS.gene75003:intron | 5.0% |
| AACCACCATACACCACTGAC+AGG | - | chr1.4:85298025-85298044 | MS.gene75003:intron | 50.0% | |
| AAGCTATGGGGCTGGAGATA+GGG | - | chr1.4:85300022-85300041 | MS.gene75003:intron | 50.0% | |
| AAGGTCCATGACCGCAATCT+AGG | + | chr1.4:85297278-85297297 | None:intergenic | 50.0% | |
| CAACACGCAAGTTACAGGCA+TGG | + | chr1.4:85298587-85298606 | None:intergenic | 50.0% | |
| CGAGGTATACCCATAGCAGA+TGG | - | chr1.4:85297919-85297938 | MS.gene75003:intron | 50.0% | |
| CGGCAAAATTCTCGAATGCC+AGG | - | chr1.4:85296897-85296916 | MS.gene75003:CDS | 50.0% | |
| CTACTAGAAGAGGAAGGAGG+CGG | + | chr1.4:85297840-85297859 | None:intergenic | 50.0% | |
| CTCCTGCCAAAGGACAATCT+CGG | + | chr1.4:85300094-85300113 | None:intergenic | 50.0% | |
| CTTCACGTCCTAGGTTTGGA+GGG | - | chr1.4:85300150-85300169 | MS.gene75003:intron | 50.0% | |
| GATGCAGACCAACGTTACAG+AGG | - | chr1.4:85299975-85299994 | MS.gene75003:intron | 50.0% | |
| GGAGCTGCAACATAGTGGTT+TGG | - | chr1.4:85298694-85298713 | MS.gene75003:intron | 50.0% | |
| GGTAAAGGTAGAGCTCAAGG+TGG | - | chr1.4:85297574-85297593 | MS.gene75003:intron | 50.0% | |
| GTACTCATAGGACCTGTCAG+TGG | + | chr1.4:85298040-85298059 | None:intergenic | 50.0% | |
| GTTTCAAATGTGGGCGTCCA+GGG | - | chr1.4:85300060-85300079 | MS.gene75003:intron | 50.0% | |
| TAGGACCTGTCAGTGGTGTA+TGG | + | chr1.4:85298033-85298052 | None:intergenic | 50.0% | |
| TCACCAAGTCAGTTAAGGGG+TGG | - | chr1.4:85298365-85298384 | MS.gene75003:intron | 50.0% | |
| TCCTGCCAAAGGACAATCTC+GGG | + | chr1.4:85300093-85300112 | None:intergenic | 50.0% | |
| TCTTCACGTCCTAGGTTTGG+AGG | - | chr1.4:85300149-85300168 | MS.gene75003:intron | 50.0% | |
| TGTATCGCTCACGTTCACCA+AGG | + | chr1.4:85300181-85300200 | None:intergenic | 50.0% | |
| TGTCAGTGGTGTATGGTGGT+TGG | + | chr1.4:85298026-85298045 | None:intergenic | 50.0% | |
| TGTTTCAAATGTGGGCGTCC+AGG | - | chr1.4:85300059-85300078 | MS.gene75003:intron | 50.0% | |
| TTCACGTCCTAGGTTTGGAG+GGG | - | chr1.4:85300151-85300170 | MS.gene75003:intron | 50.0% | |
| TTGCTAGTATTCTCCTCCCC+AGG | + | chr1.4:85298497-85298516 | None:intergenic | 50.0% | |
| ! | AGAGGTGGTTTTTCTTCGGG+TGG | - | chr1.4:85299993-85300012 | MS.gene75003:intron | 50.0% |
| ! | ATTTTCAGACCGTCGGGGAA+TGG | - | chr1.4:85299866-85299885 | MS.gene75003:intron | 50.0% |
| ! | CGTTATGACGGAGGACGTTA+TGG | - | chr1.4:85300209-85300228 | MS.gene75003:CDS | 50.0% |
| ! | GGTTTTTCTTCGGGTGGTAG+GGG | - | chr1.4:85299999-85300018 | MS.gene75003:intron | 50.0% |
| ! | GTGGTTTTTCTTCGGGTGGT+AGG | - | chr1.4:85299997-85300016 | MS.gene75003:intron | 50.0% |
| ! | TGCATTGACATCGTTCCTCG+TGG | + | chr1.4:85298557-85298576 | None:intergenic | 50.0% |
| !! | TTGGCAGAGAAAGAGGTACC+TGG | + | chr1.4:85296918-85296937 | None:intergenic | 50.0% |
| AACAAGGCACAGCCCAGGAT+GGG | - | chr1.4:85299945-85299964 | MS.gene75003:intron | 55.0% | |
| ACAGGACGACCACGTGGATT+TGG | - | chr1.4:85299834-85299853 | MS.gene75003:intron | 55.0% | |
| ACGGAGGACGTTATGGGGAT+AGG | - | chr1.4:85300216-85300235 | MS.gene75003:CDS | 55.0% | |
| AGGAGGCGGATGAACAGACA+CGG | + | chr1.4:85297826-85297845 | None:intergenic | 55.0% | |
| CAGGACGACCACGTGGATTT+GGG | - | chr1.4:85299835-85299854 | MS.gene75003:intron | 55.0% | |
| CGAGATTGTCCTTTGGCAGG+AGG | - | chr1.4:85300092-85300111 | MS.gene75003:intron | 55.0% | |
| CGGAGGACGTTATGGGGATA+GGG | - | chr1.4:85300217-85300236 | MS.gene75003:CDS | 55.0% | |
| CGTGACCTAGATTGCGGTCA+TGG | - | chr1.4:85297270-85297289 | MS.gene75003:CDS | 55.0% | |
| CTGCCACCCCTTAACTGACT+TGG | + | chr1.4:85298371-85298390 | None:intergenic | 55.0% | |
| GAAGCTATGGGGCTGGAGAT+AGG | - | chr1.4:85300021-85300040 | MS.gene75003:intron | 55.0% | |
| GACCTGTCAGTGGTGTATGG+TGG | + | chr1.4:85298030-85298049 | None:intergenic | 55.0% | |
| GCAGACCAACGTTACAGAGG+TGG | - | chr1.4:85299978-85299997 | MS.gene75003:intron | 55.0% | |
| GCGGAAGCAAAGGCAGCATA+CGG | + | chr1.4:85297963-85297982 | None:intergenic | 55.0% | |
| TATGGGGCTGGAGATAGGGT+AGG | - | chr1.4:85300026-85300045 | MS.gene75003:intron | 55.0% | |
| TGTCCTTTGGCAGGAGGTGA+TGG | - | chr1.4:85300098-85300117 | MS.gene75003:intron | 55.0% | |
| TTGCATCCTCCATTCCCCGA+CGG | + | chr1.4:85299878-85299897 | None:intergenic | 55.0% | |
| ! | GCGAAAGCATGATCTCCACG+AGG | - | chr1.4:85298539-85298558 | MS.gene75003:intron | 55.0% |
| ACAAGGCACAGCCCAGGATG+GGG | - | chr1.4:85299946-85299965 | MS.gene75003:intron | 60.0% | |
| AGGCGATCCCCTCCAAACCT+AGG | + | chr1.4:85300161-85300180 | None:intergenic | 60.0% | |
| AGGGATACAGGACGACCACG+TGG | - | chr1.4:85299828-85299847 | MS.gene75003:intron | 60.0% | |
| AGGTTTGGAGGGGATCGCCT+TGG | - | chr1.4:85300161-85300180 | MS.gene75003:intron | 60.0% | |
| CAACAAGGCACAGCCCAGGA+TGG | - | chr1.4:85299944-85299963 | MS.gene75003:intron | 60.0% | |
| CAGTCAACAAGGCACAGCCC+AGG | - | chr1.4:85299940-85299959 | MS.gene75003:intron | 60.0% | |
| CCACCATCACCTCCTGCCAA+AGG | + | chr1.4:85300104-85300123 | None:intergenic | 60.0% | |
| CGGGTGGTAGGGGAAGCTAT+GGG | - | chr1.4:85300009-85300028 | MS.gene75003:intron | 60.0% | |
| CTGGGCCCGAGATTGTCCTT+TGG | - | chr1.4:85300085-85300104 | MS.gene75003:intron | 60.0% | |
| GCATCATCACCCCCCATCCT+GGG | + | chr1.4:85299960-85299979 | None:intergenic | 60.0% | |
| GCCCGAGATTGTCCTTTGGC+AGG | - | chr1.4:85300089-85300108 | MS.gene75003:intron | 60.0% | |
| GGCTGGAGATAGGGTAGGAC+AGG | - | chr1.4:85300031-85300050 | MS.gene75003:intron | 60.0% | |
| GGGTGGTAGGGGAAGCTATG+GGG | - | chr1.4:85300010-85300029 | MS.gene75003:intron | 60.0% | |
| TCGGGTGGTAGGGGAAGCTA+TGG | - | chr1.4:85300008-85300027 | MS.gene75003:intron | 60.0% | |
| TGCATCATCACCCCCCATCC+TGG | + | chr1.4:85299961-85299980 | None:intergenic | 60.0% | |
| TGGGGATGGGGGAAAAGAGC+TGG | - | chr1.4:85299407-85299426 | MS.gene75003:intron | 60.0% | |
| TTCAGACCGTCGGGGAATGG+AGG | - | chr1.4:85299869-85299888 | MS.gene75003:intron | 60.0% | |
| ! | CCTTTGGCAGGAGGTGATGG+TGG | - | chr1.4:85300101-85300120 | MS.gene75003:intron | 60.0% |
| !! | AGGTGATGGTGGTCGTGGTC+GGG | - | chr1.4:85300112-85300131 | MS.gene75003:intron | 60.0% |
| !! | GAGGTGATGGTGGTCGTGGT+CGG | - | chr1.4:85300111-85300130 | MS.gene75003:intron | 60.0% |
| AAGGCACAGCCCAGGATGGG+GGG | - | chr1.4:85299948-85299967 | MS.gene75003:intron | 65.0% | |
| AATGTGGGCGTCCAGGGCAC+TGG | - | chr1.4:85300066-85300085 | MS.gene75003:intron | 65.0% | |
| CAAGGCACAGCCCAGGATGG+GGG | - | chr1.4:85299947-85299966 | MS.gene75003:intron | 65.0% | |
| GGTAGGGGAAGCTATGGGGC+TGG | - | chr1.4:85300014-85300033 | MS.gene75003:intron | 65.0% | |
| ! | ATGTGGGCGTCCAGGGCACT+GGG | - | chr1.4:85300067-85300086 | MS.gene75003:intron | 65.0% |
| !! | GCAGGAGGTGATGGTGGTCG+TGG | - | chr1.4:85300107-85300126 | MS.gene75003:intron | 65.0% |
| !! | GGTGATGGTGGTCGTGGTCG+GGG | - | chr1.4:85300113-85300132 | MS.gene75003:intron | 65.0% |
| CAATCTCGGGCCCAGTGCCC+TGG | + | chr1.4:85300080-85300099 | None:intergenic | 70.0% | |
| ! | GATGGTGGTCGTGGTCGGGG+TGG | - | chr1.4:85300116-85300135 | MS.gene75003:intron | 70.0% |
| GGTGGTCGTGGTCGGGGTGG+TGG | - | chr1.4:85300119-85300138 | MS.gene75003:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 85296808 | 85300297 | 85296808 | ID=MS.gene75003 |
| chr1.4 | mRNA | 85296808 | 85300297 | 85296808 | ID=MS.gene75003.t1;Parent=MS.gene75003 |
| chr1.4 | exon | 85300187 | 85300297 | 85300187 | ID=MS.gene75003.t1.exon1;Parent=MS.gene75003.t1 |
| chr1.4 | CDS | 85300187 | 85300297 | 85300187 | ID=cds.MS.gene75003.t1;Parent=MS.gene75003.t1 |
| chr1.4 | exon | 85296808 | 85297289 | 85296808 | ID=MS.gene75003.t1.exon2;Parent=MS.gene75003.t1 |
| chr1.4 | CDS | 85296808 | 85297289 | 85296808 | ID=cds.MS.gene75003.t1;Parent=MS.gene75003.t1 |
| Gene Sequence |
| Protein sequence |
