Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06984.t1 | KEH24379.1 | 90.3 | 226 | 4 | 3 | 1 | 225 | 1 | 209 | 2.20E-68 | 268.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06984.t1 | P0C8Z0 | 70.7 | 123 | 33 | 1 | 1 | 123 | 1 | 120 | 2.6e-46 | 186.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06984.t1 | A0A072U3U0 | 90.3 | 226 | 4 | 3 | 1 | 225 | 1 | 209 | 1.6e-68 | 268.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049129 | MS.gene06984 | -0.86234 | 5.43E-64 | -1.69E-46 |
| MS.gene049140 | MS.gene06984 | 0.817387 | 3.39E-52 | -1.69E-46 |
| MS.gene049255 | MS.gene06984 | 0.860433 | 2.07E-63 | -1.69E-46 |
| MS.gene049341 | MS.gene06984 | 0.803028 | 4.24E-49 | -1.69E-46 |
| MS.gene049411 | MS.gene06984 | 0.843602 | 1.27E-58 | -1.69E-46 |
| MS.gene049580 | MS.gene06984 | 0.839153 | 1.88E-57 | -1.69E-46 |
| MS.gene049680 | MS.gene06984 | 0.819336 | 1.23E-52 | -1.69E-46 |
| MS.gene049824 | MS.gene06984 | 0.808263 | 3.38E-50 | -1.69E-46 |
| MS.gene049825 | MS.gene06984 | 0.822832 | 1.92E-53 | -1.69E-46 |
| MS.gene049873 | MS.gene06984 | 0.801355 | 9.36E-49 | -1.69E-46 |
| MS.gene050277 | MS.gene06984 | 0.871288 | 7.66E-67 | -1.69E-46 |
| MS.gene050320 | MS.gene06984 | 0.817359 | 3.43E-52 | -1.69E-46 |
| MS.gene050437 | MS.gene06984 | 0.828112 | 1.08E-54 | -1.69E-46 |
| MS.gene050689 | MS.gene06984 | 0.840169 | 1.02E-57 | -1.69E-46 |
| MS.gene050752 | MS.gene06984 | 0.899625 | 1.65E-77 | -1.69E-46 |
| MS.gene050838 | MS.gene06984 | 0.882406 | 1.07E-70 | -1.69E-46 |
| MS.gene050945 | MS.gene06984 | 0.866016 | 3.88E-65 | -1.69E-46 |
| MS.gene050955 | MS.gene06984 | 0.893327 | 6.97E-75 | -1.69E-46 |
| MS.gene051003 | MS.gene06984 | 0.889708 | 1.90E-73 | -1.69E-46 |
| MS.gene051043 | MS.gene06984 | 0.800068 | 1.71E-48 | -1.69E-46 |
| MS.gene051233 | MS.gene06984 | 0.843565 | 1.30E-58 | -1.69E-46 |
| MS.gene051234 | MS.gene06984 | 0.894513 | 2.30E-75 | -1.69E-46 |
| MS.gene051241 | MS.gene06984 | 0.80327 | 3.78E-49 | -1.69E-46 |
| MS.gene051328 | MS.gene06984 | 0.849206 | 3.75E-60 | -1.69E-46 |
| MS.gene051330 | MS.gene06984 | 0.81915 | 1.35E-52 | -1.69E-46 |
| MS.gene051343 | MS.gene06984 | 0.859273 | 4.63E-63 | -1.69E-46 |
| MS.gene05134 | MS.gene06984 | 0.850225 | 1.95E-60 | -1.69E-46 |
| MS.gene051451 | MS.gene06984 | 0.817131 | 3.87E-52 | -1.69E-46 |
| MS.gene051700 | MS.gene06984 | 0.814026 | 1.90E-51 | -1.69E-46 |
| MS.gene051746 | MS.gene06984 | 0.850184 | 2.00E-60 | -1.69E-46 |
| MS.gene051748 | MS.gene06984 | 0.850726 | 1.41E-60 | -1.69E-46 |
| MS.gene051850 | MS.gene06984 | 0.826928 | 2.07E-54 | -1.69E-46 |
| MS.gene05188 | MS.gene06984 | 0.855636 | 5.52E-62 | -1.69E-46 |
| MS.gene051902 | MS.gene06984 | 0.832771 | 7.82E-56 | -1.69E-46 |
| MS.gene051903 | MS.gene06984 | 0.884373 | 2.03E-71 | -1.69E-46 |
| MS.gene051975 | MS.gene06984 | 0.849126 | 3.95E-60 | -1.69E-46 |
| MS.gene052072 | MS.gene06984 | 0.828417 | 9.10E-55 | -1.69E-46 |
| MS.gene052133 | MS.gene06984 | 0.814758 | 1.31E-51 | -1.69E-46 |
| MS.gene052296 | MS.gene06984 | 0.802315 | 5.95E-49 | -1.69E-46 |
| MS.gene052335 | MS.gene06984 | 0.824818 | 6.57E-54 | -1.69E-46 |
| MS.gene052342 | MS.gene06984 | 0.80043 | 1.45E-48 | -1.69E-46 |
| MS.gene052479 | MS.gene06984 | 0.844164 | 8.96E-59 | -1.69E-46 |
| MS.gene052818 | MS.gene06984 | -0.825385 | 4.82E-54 | -1.69E-46 |
| MS.gene052947 | MS.gene06984 | 0.907065 | 7.58E-81 | -1.69E-46 |
| MS.gene053058 | MS.gene06984 | 0.887431 | 1.44E-72 | -1.69E-46 |
| MS.gene053109 | MS.gene06984 | 0.831387 | 1.72E-55 | -1.69E-46 |
| MS.gene053122 | MS.gene06984 | 0.82841 | 9.13E-55 | -1.69E-46 |
| MS.gene053564 | MS.gene06984 | 0.827592 | 1.44E-54 | -1.69E-46 |
| MS.gene053581 | MS.gene06984 | 0.804156 | 2.47E-49 | -1.69E-46 |
| MS.gene053590 | MS.gene06984 | 0.80553 | 1.28E-49 | -1.69E-46 |
| MS.gene05364 | MS.gene06984 | 0.831239 | 1.87E-55 | -1.69E-46 |
| MS.gene053786 | MS.gene06984 | 0.805567 | 1.25E-49 | -1.69E-46 |
| MS.gene053931 | MS.gene06984 | 0.812552 | 4.00E-51 | -1.69E-46 |
| MS.gene053952 | MS.gene06984 | 0.83785 | 4.07E-57 | -1.69E-46 |
| MS.gene054004 | MS.gene06984 | 0.814236 | 1.71E-51 | -1.69E-46 |
| MS.gene054403 | MS.gene06984 | 0.904 | 1.94E-79 | -1.69E-46 |
| MS.gene054413 | MS.gene06984 | 0.845112 | 4.98E-59 | -1.69E-46 |
| MS.gene05469 | MS.gene06984 | 0.820207 | 7.75E-53 | -1.69E-46 |
| MS.gene055162 | MS.gene06984 | 0.816001 | 6.93E-52 | -1.69E-46 |
| MS.gene05517 | MS.gene06984 | 0.811416 | 7.08E-51 | -1.69E-46 |
| MS.gene055424 | MS.gene06984 | 0.821757 | 3.41E-53 | -1.69E-46 |
| MS.gene05548 | MS.gene06984 | 0.802981 | 4.33E-49 | -1.69E-46 |
| MS.gene055555 | MS.gene06984 | 0.870373 | 1.53E-66 | -1.69E-46 |
| MS.gene055580 | MS.gene06984 | -0.803716 | 3.05E-49 | -1.69E-46 |
| MS.gene055765 | MS.gene06984 | 0.823721 | 1.19E-53 | -1.69E-46 |
| MS.gene055808 | MS.gene06984 | 0.836921 | 7.05E-57 | -1.69E-46 |
| MS.gene055979 | MS.gene06984 | 0.819042 | 1.43E-52 | -1.69E-46 |
| MS.gene056043 | MS.gene06984 | -0.819881 | 9.20E-53 | -1.69E-46 |
| MS.gene056075 | MS.gene06984 | 0.868381 | 6.81E-66 | -1.69E-46 |
| MS.gene056091 | MS.gene06984 | 0.830477 | 2.87E-55 | -1.69E-46 |
| MS.gene056215 | MS.gene06984 | 0.833296 | 5.79E-56 | -1.69E-46 |
| MS.gene056403 | MS.gene06984 | 0.814805 | 1.28E-51 | -1.69E-46 |
| MS.gene056580 | MS.gene06984 | 0.808397 | 3.16E-50 | -1.69E-46 |
| MS.gene056605 | MS.gene06984 | 0.814638 | 1.39E-51 | -1.69E-46 |
| MS.gene056631 | MS.gene06984 | 0.86206 | 6.62E-64 | -1.69E-46 |
| MS.gene05689 | MS.gene06984 | 0.830377 | 3.04E-55 | -1.69E-46 |
| MS.gene056986 | MS.gene06984 | 0.849337 | 3.45E-60 | -1.69E-46 |
| MS.gene057057 | MS.gene06984 | 0.809768 | 1.61E-50 | -1.69E-46 |
| MS.gene057094 | MS.gene06984 | 0.855632 | 5.54E-62 | -1.69E-46 |
| MS.gene057102 | MS.gene06984 | 0.831968 | 1.24E-55 | -1.69E-46 |
| MS.gene057234 | MS.gene06984 | 0.849479 | 3.15E-60 | -1.69E-46 |
| MS.gene057694 | MS.gene06984 | 0.830454 | 2.91E-55 | -1.69E-46 |
| MS.gene057705 | MS.gene06984 | 0.935653 | 6.05E-97 | -1.69E-46 |
| MS.gene05781 | MS.gene06984 | 0.88385 | 3.16E-71 | -1.69E-46 |
| MS.gene057999 | MS.gene06984 | 0.844892 | 5.70E-59 | -1.69E-46 |
| MS.gene058054 | MS.gene06984 | 0.821846 | 3.25E-53 | -1.69E-46 |
| MS.gene058055 | MS.gene06984 | 0.830509 | 2.82E-55 | -1.69E-46 |
| MS.gene058074 | MS.gene06984 | 0.834225 | 3.39E-56 | -1.69E-46 |
| MS.gene058149 | MS.gene06984 | 0.813677 | 2.27E-51 | -1.69E-46 |
| MS.gene058238 | MS.gene06984 | 0.843412 | 1.42E-58 | -1.69E-46 |
| MS.gene058261 | MS.gene06984 | 0.819387 | 1.19E-52 | -1.69E-46 |
| MS.gene058364 | MS.gene06984 | 0.808109 | 3.64E-50 | -1.69E-46 |
| MS.gene059146 | MS.gene06984 | 0.892216 | 1.95E-74 | -1.69E-46 |
| MS.gene059227 | MS.gene06984 | 0.831629 | 1.50E-55 | -1.69E-46 |
| MS.gene05953 | MS.gene06984 | 0.80958 | 1.76E-50 | -1.69E-46 |
| MS.gene05954 | MS.gene06984 | 0.800635 | 1.31E-48 | -1.69E-46 |
| MS.gene05978 | MS.gene06984 | 0.818768 | 1.65E-52 | -1.69E-46 |
| MS.gene05985 | MS.gene06984 | -0.826815 | 2.21E-54 | -1.69E-46 |
| MS.gene059901 | MS.gene06984 | -0.849341 | 3.44E-60 | -1.69E-46 |
| MS.gene059935 | MS.gene06984 | 0.801029 | 1.09E-48 | -1.69E-46 |
| MS.gene06001 | MS.gene06984 | 0.87268 | 2.64E-67 | -1.69E-46 |
| MS.gene06011 | MS.gene06984 | 0.852434 | 4.63E-61 | -1.69E-46 |
| MS.gene060365 | MS.gene06984 | 0.803152 | 4.00E-49 | -1.69E-46 |
| MS.gene060429 | MS.gene06984 | 0.859919 | 2.96E-63 | -1.69E-46 |
| MS.gene060586 | MS.gene06984 | 0.805526 | 1.28E-49 | -1.69E-46 |
| MS.gene060763 | MS.gene06984 | 0.893627 | 5.27E-75 | -1.69E-46 |
| MS.gene060830 | MS.gene06984 | 0.856004 | 4.31E-62 | -1.69E-46 |
| MS.gene060917 | MS.gene06984 | 0.830578 | 2.71E-55 | -1.69E-46 |
| MS.gene061100 | MS.gene06984 | 0.817787 | 2.75E-52 | -1.69E-46 |
| MS.gene06118 | MS.gene06984 | 0.809015 | 2.33E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06984.t1 | MTR_7g108860 | 94.043 | 235 | 3 | 3 | 1 | 225 | 1 | 234 | 8.59e-150 | 416 |
| MS.gene06984.t1 | MTR_8g058597 | 94.043 | 235 | 3 | 3 | 1 | 225 | 1 | 234 | 8.59e-150 | 416 |
| MS.gene06984.t1 | MTR_7g108860 | 93.991 | 233 | 3 | 3 | 3 | 225 | 11 | 242 | 1.47e-148 | 413 |
| MS.gene06984.t1 | MTR_7g108860 | 93.137 | 204 | 4 | 2 | 1 | 194 | 1 | 204 | 1.14e-128 | 362 |
| MS.gene06984.t1 | MTR_7g108860 | 86.726 | 226 | 12 | 3 | 1 | 225 | 1 | 209 | 9.14e-94 | 273 |
| MS.gene06984.t1 | MTR_1g088700 | 55.652 | 230 | 50 | 5 | 1 | 225 | 1 | 183 | 1.15e-74 | 224 |
| MS.gene06984.t1 | MTR_6g034550 | 50.355 | 141 | 66 | 1 | 1 | 137 | 1 | 141 | 4.98e-43 | 144 |
| MS.gene06984.t1 | MTR_6g027770 | 48.624 | 109 | 55 | 1 | 1 | 109 | 1 | 108 | 5.12e-33 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06984.t1 | AT4G02450 | 60.000 | 125 | 48 | 2 | 1 | 124 | 1 | 124 | 2.54e-49 | 161 |
| MS.gene06984.t1 | AT4G02450 | 60.000 | 125 | 48 | 2 | 1 | 124 | 1 | 124 | 2.61e-49 | 161 |
| MS.gene06984.t1 | AT3G03773 | 52.212 | 113 | 52 | 2 | 1 | 113 | 1 | 111 | 8.50e-35 | 120 |
| MS.gene06984.t1 | AT3G03773 | 52.212 | 113 | 52 | 2 | 1 | 113 | 1 | 111 | 9.43e-35 | 121 |
| MS.gene06984.t1 | AT3G03773 | 51.327 | 113 | 53 | 2 | 1 | 113 | 55 | 165 | 2.92e-33 | 119 |
Find 81 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAAATAGATTGGGATAAA+TGG | 0.128154 | 7.3:+6325111 | MS.gene06984:CDS |
| ATGGGAGGCATGGGCGGCTT+GGG | 0.312741 | 7.3:+6325673 | MS.gene06984:CDS |
| CCAGCAGCATCTTGCTCTCC+AGG | 0.348935 | 7.3:-6327100 | None:intergenic |
| GGGCGGCTTGGGAGGAATGA+TGG | 0.360240 | 7.3:+6325684 | MS.gene06984:CDS |
| CTCATTATGTGAAAATAGAT+TGG | 0.366482 | 7.3:+6325102 | MS.gene06984:CDS |
| GAAAAGGTAAAATCACCTTC+TGG | 0.394930 | 7.3:-6324724 | None:intergenic |
| GGCGGCTTGGGAGGAATGAT+GGG | 0.395763 | 7.3:+6325685 | MS.gene06984:CDS |
| TGTGTACTGCAGAAATTTGC+TGG | 0.400858 | 7.3:+6325842 | MS.gene06984:intron |
| GAAAATAGATTGGGATAAAT+GGG | 0.403064 | 7.3:+6325112 | MS.gene06984:CDS |
| GGAGGCATGGGCGGCTTGGG+AGG | 0.412828 | 7.3:+6325676 | MS.gene06984:CDS |
| TTCTGGAGTAAGATCAACTT+TGG | 0.412841 | 7.3:-6324707 | None:intergenic |
| CTTGGGAGGAATGGATTTCT+CGG | 0.413548 | 7.3:+6325272 | MS.gene06984:CDS |
| GATGCTGCTGGCAAGAGCGC+TGG | 0.414372 | 7.3:+6327112 | MS.gene06984:CDS |
| AATGGGAGGCATGGGCGGCT+TGG | 0.421152 | 7.3:+6325672 | MS.gene06984:CDS |
| GGAGGAATGGGAGGCATGGG+CGG | 0.422053 | 7.3:+6325667 | MS.gene06984:CDS |
| TGCAAGGTTATTATGTGCTC+GGG | 0.426606 | 7.3:-6327168 | None:intergenic |
| CTGCAAGGTTATTATGTGCT+CGG | 0.431755 | 7.3:-6327169 | None:intergenic |
| AATGGGAGGCATGGGAGGAA+TGG | 0.435114 | 7.3:+6325720 | MS.gene06984:CDS |
| GCGGCTTGGGAGGAATGATG+GGG | 0.439489 | 7.3:+6325686 | MS.gene06984:CDS |
| GGAGGAATGGGAGGCATGGG+AGG | 0.441962 | 7.3:+6325715 | MS.gene06984:CDS |
| CTGCAGAAATTCGGCGGGAT+GGG | 0.442879 | 7.3:+6325628 | MS.gene06984:intron |
| GATGATCCAATGGGAGGAAT+GGG | 0.449196 | 7.3:+6325655 | MS.gene06984:CDS |
| CGGCTTGGGAGGAATGATGG+GGG | 0.450615 | 7.3:+6325687 | MS.gene06984:CDS |
| ATGCCTCCCATTCCTCCCAT+TGG | 0.456440 | 7.3:-6325661 | None:intergenic |
| AGGTGGTGGTGATGTTGACT+TGG | 0.458241 | 7.3:+6325254 | MS.gene06984:intron |
| ATGGGAGGAATGGGAGGCAT+GGG | 0.458260 | 7.3:+6325712 | MS.gene06984:CDS |
| CATGGGAGGAATGGGAGGCA+TGG | 0.459907 | 7.3:+6325711 | MS.gene06984:CDS |
| ATGGGAGGAATGGGAGGCAT+GGG | 0.470038 | 7.3:+6325664 | MS.gene06984:CDS |
| TGATGTTGACTTGGGAGGAA+TGG | 0.471471 | 7.3:+6325263 | MS.gene06984:CDS |
| GTCGTCATCCCGAGGTTAAG+TGG | 0.476828 | 7.3:+6324629 | MS.gene06984:intron |
| AATGGAAGGACTGGGAGGAA+TGG | 0.482020 | 7.3:+6325738 | MS.gene06984:CDS |
| TGTGTACTACTGCAGAAATT+CGG | 0.482929 | 7.3:+6325619 | MS.gene06984:intron |
| CATGGGAGGAATGGAAGGAC+TGG | 0.485477 | 7.3:+6325729 | MS.gene06984:CDS |
| TCATTATGTGAAAATAGATT+GGG | 0.486084 | 7.3:+6325103 | MS.gene06984:CDS |
| AGCACCAGCACTACCAGAAA+AGG | 0.488899 | 7.3:-6324740 | None:intergenic |
| CTCTGTGCCCACTTAACCTC+GGG | 0.490812 | 7.3:-6324637 | None:intergenic |
| CCTGGAGAGCAAGATGCTGC+TGG | 0.496634 | 7.3:+6327100 | MS.gene06984:CDS |
| CTGAGAGTGGATGGTGGAAG+AGG | 0.498153 | 7.3:+6325054 | MS.gene06984:CDS |
| AATGGGAGGAATGGGAGGCA+TGG | 0.503653 | 7.3:+6325663 | MS.gene06984:CDS |
| GATCAAGAAGTGTCAAAGCC+TGG | 0.508961 | 7.3:+6327082 | MS.gene06984:intron |
| TGATGATCCAATGGGAGGAA+TGG | 0.517095 | 7.3:+6325654 | MS.gene06984:CDS |
| GGAGGCATGGGAGGAATGGA+AGG | 0.525417 | 7.3:+6325724 | MS.gene06984:CDS |
| AAGAGGTTGCTGCGTGGAGA+AGG | 0.527175 | 7.3:+6325071 | MS.gene06984:CDS |
| ACTGCAGAAATTCGGCGGGA+TGG | 0.533257 | 7.3:+6325627 | MS.gene06984:intron |
| GGCTTGGGAGGAATGATGGG+GGG | 0.535535 | 7.3:+6325688 | MS.gene06984:CDS |
| TGGGATGGGTGGTGATGCAA+TGG | 0.535642 | 7.3:+6325862 | MS.gene06984:CDS |
| TGCTGGCAAGAGCGCTGGTG+AGG | 0.538363 | 7.3:+6327117 | MS.gene06984:CDS |
| CATATTCTGTGTAGTGCAGA+AGG | 0.542490 | 7.3:+6325031 | MS.gene06984:CDS |
| ACTGCAGAAATTTGCTGGGA+TGG | 0.543444 | 7.3:+6325847 | MS.gene06984:intron |
| GGTCTACATCACAGTGCAGT+TGG | 0.544236 | 7.3:+6324669 | MS.gene06984:CDS |
| AAAGTTGATCTTACTCCAGA+AGG | 0.549028 | 7.3:+6324709 | MS.gene06984:CDS |
| GATGGGTGGTGATGATCCAA+TGG | 0.551280 | 7.3:+6325645 | MS.gene06984:CDS |
| CAGAAATTCGGCGGGATGGG+TGG | 0.555897 | 7.3:+6325631 | MS.gene06984:intron |
| TACTACTGCAGAAATTCGGC+GGG | 0.556423 | 7.3:+6325623 | MS.gene06984:intron |
| GATGAAGATGAGGCTGAAGA+AGG | 0.560115 | 7.3:+6325137 | MS.gene06984:CDS |
| CTGCAGAAATTTGCTGGGAT+GGG | 0.566994 | 7.3:+6325848 | MS.gene06984:intron |
| GGTGGTGGTGATGTTGACTT+GGG | 0.569285 | 7.3:+6325255 | MS.gene06984:intron |
| GTTGCTGCGTGGAGAAGGCA+AGG | 0.570508 | 7.3:+6325076 | MS.gene06984:CDS |
| CTTTGACAAGGTTAATGTAG+AGG | 0.578313 | 7.3:+6324795 | MS.gene06984:CDS |
| CAGGAGAGCAAAATCAGTGT+AGG | 0.585626 | 7.3:+6324999 | MS.gene06984:intron |
| ATGGGAGGAATGGAAGGACT+GGG | 0.592383 | 7.3:+6325730 | MS.gene06984:CDS |
| TGCAGAAGGCTGAGAGTGGA+TGG | 0.594343 | 7.3:+6325045 | MS.gene06984:CDS |
| TCTCTGTGCCCACTTAACCT+CGG | 0.594623 | 7.3:-6324638 | None:intergenic |
| GGTGGTGATGTTGACTTGGG+AGG | 0.595938 | 7.3:+6325258 | MS.gene06984:CDS |
| GATCCAATGGGAGGAATGGG+AGG | 0.596994 | 7.3:+6325658 | MS.gene06984:CDS |
| CAGAAATTTGCTGGGATGGG+TGG | 0.597276 | 7.3:+6325851 | MS.gene06984:intron |
| TCGTCATCCCGAGGTTAAGT+GGG | 0.605727 | 7.3:+6324630 | MS.gene06984:CDS |
| ATTGACGAGAGTGACGATGA+AGG | 0.607086 | 7.3:+6325890 | MS.gene06984:CDS |
| ATGGGTGGTGATGATCCAAT+GGG | 0.611795 | 7.3:+6325646 | MS.gene06984:CDS |
| GTGTACTGCAGAAATTTGCT+GGG | 0.618065 | 7.3:+6325843 | MS.gene06984:intron |
| GTGGGCACAGAGAGTAGACA+AGG | 0.620515 | 7.3:+6324648 | MS.gene06984:CDS |
| GAAACTTGAGCTCTTTGACA+AGG | 0.629398 | 7.3:+6324783 | MS.gene06984:CDS |
| GGAGGAATGGAAGGACTGGG+AGG | 0.646274 | 7.3:+6325733 | MS.gene06984:CDS |
| ATGATGCAGTCGTCATCCCG+AGG | 0.646727 | 7.3:+6324621 | MS.gene06984:intron |
| TAAATGGGTCGATGAAGATG+AGG | 0.649358 | 7.3:+6325127 | MS.gene06984:CDS |
| GTACTACTGCAGAAATTCGG+CGG | 0.650088 | 7.3:+6325622 | MS.gene06984:intron |
| GTAGTGCAGAAGGCTGAGAG+TGG | 0.686588 | 7.3:+6325041 | MS.gene06984:CDS |
| GGTGGTGATGATCCAATGGG+AGG | 0.688264 | 7.3:+6325649 | MS.gene06984:CDS |
| GCAAGGTTATTATGTGCTCG+GGG | 0.703220 | 7.3:-6327167 | None:intergenic |
| AGAAGGCTGAGAGTGGATGG+TGG | 0.722955 | 7.3:+6325048 | MS.gene06984:CDS |
| TGGTGGAAGAGGTTGCTGCG+TGG | 0.748724 | 7.3:+6325065 | MS.gene06984:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATAAGATAATAATTTTTC+GGG | - | chr7.3:6326405-6326424 | None:intergenic | 10.0% |
| !!! | TATTAATTTATGATTTTCTT+GGG | + | chr7.3:6326357-6326376 | MS.gene06984:intron | 10.0% |
| !!! | TTATTAATTTATGATTTTCT+TGG | + | chr7.3:6326356-6326375 | MS.gene06984:intron | 10.0% |
| !!! | TTTTGTTGATATTAATTTTT+AGG | + | chr7.3:6325333-6325352 | MS.gene06984:intron | 10.0% |
| !! | AGATTATTAATTTCAATTTG+AGG | + | chr7.3:6326809-6326828 | MS.gene06984:intron | 15.0% |
| !! | GATTATTAATTTCAATTTGA+GGG | + | chr7.3:6326810-6326829 | MS.gene06984:intron | 15.0% |
| !! | TATCCATTAAAAAAATTCAA+AGG | - | chr7.3:6325177-6325196 | None:intergenic | 15.0% |
| !! | TCTAAATTAATAAATTTCTC+CGG | - | chr7.3:6326072-6326091 | None:intergenic | 15.0% |
| !!! | AGTTTTTCAATTTTTTACAT+TGG | + | chr7.3:6326433-6326452 | MS.gene06984:intron | 15.0% |
| !!! | TCTAAAATAATAAATTTGTC+CGG | - | chr7.3:6326471-6326490 | None:intergenic | 15.0% |
| !!! | TTTGAATTTTTTTAATGGAT+AGG | + | chr7.3:6325176-6325195 | MS.gene06984:intron | 15.0% |
| !! | AAACTATGAAACAAAATGTT+AGG | + | chr7.3:6324368-6324387 | MS.gene06984:intron | 20.0% |
| !! | AAACTCTTTGAATTAATACT+CGG | - | chr7.3:6326509-6326528 | None:intergenic | 20.0% |
| !! | AACTATGAAACAAAATGTTA+GGG | + | chr7.3:6324369-6324388 | MS.gene06984:intron | 20.0% |
| !! | ACTAAGAAAAAGGAAATTAA+AGG | - | chr7.3:6326921-6326940 | None:intergenic | 20.0% |
| !! | CTAAGAAAAAGGAAATTAAA+GGG | - | chr7.3:6326920-6326939 | None:intergenic | 20.0% |
| !! | CTCTATAAATTAATAATGTC+AGG | + | chr7.3:6326045-6326064 | MS.gene06984:intron | 20.0% |
| !! | TAAGAAAAAGGAAATTAAAG+GGG | - | chr7.3:6326919-6326938 | None:intergenic | 20.0% |
| !! | TCATTATGTGAAAATAGATT+GGG | + | chr7.3:6325103-6325122 | MS.gene06984:CDS | 20.0% |
| !!! | GGACAACAATATATTTTTAT+TGG | + | chr7.3:6325197-6325216 | MS.gene06984:intron | 20.0% |
| !!! | GTTTTGATTTATATGCTTAT+CGG | + | chr7.3:6324582-6324601 | MS.gene06984:intron | 20.0% |
| !!! | TGTCCTTTGAATTTTTTTAA+TGG | + | chr7.3:6325171-6325190 | MS.gene06984:intron | 20.0% |
| !!! | TTATTAGAGCTGTTTTAAAA+TGG | + | chr7.3:6324551-6324570 | MS.gene06984:intron | 20.0% |
| ! | AAGAAAAAGGAAATTAAAGG+GGG | - | chr7.3:6326918-6326937 | None:intergenic | 25.0% |
| ! | ACACTTCTTGATCTATAATT+GGG | - | chr7.3:6327075-6327094 | None:intergenic | 25.0% |
| ! | ACTATGAAACAAAATGTTAG+GGG | + | chr7.3:6324370-6324389 | MS.gene06984:intron | 25.0% |
| ! | ACTGTACATACTAAACAAAA+AGG | + | chr7.3:6326152-6326171 | MS.gene06984:intron | 25.0% |
| ! | AGAAATATTGTAGTGAGAAA+TGG | - | chr7.3:6325479-6325498 | None:intergenic | 25.0% |
| ! | ATAATTAAATCATGCCTCTA+TGG | + | chr7.3:6324406-6324425 | MS.gene06984:intron | 25.0% |
| ! | ATCAACAAAATGATACAACT+GGG | - | chr7.3:6325323-6325342 | None:intergenic | 25.0% |
| ! | CTCATTATGTGAAAATAGAT+TGG | + | chr7.3:6325102-6325121 | MS.gene06984:CDS | 25.0% |
| ! | CTTTCTTGTATATGACTATT+TGG | + | chr7.3:6324497-6324516 | MS.gene06984:intron | 25.0% |
| ! | GAAAATAGATTGGGATAAAT+GGG | + | chr7.3:6325112-6325131 | MS.gene06984:CDS | 25.0% |
| ! | TAAATTAATAATGTCAGGAC+CGG | + | chr7.3:6326050-6326069 | MS.gene06984:intron | 25.0% |
| ! | TATCAACAAAATGATACAAC+TGG | - | chr7.3:6325324-6325343 | None:intergenic | 25.0% |
| ! | TGAAAATAGATTGGGATAAA+TGG | + | chr7.3:6325111-6325130 | MS.gene06984:CDS | 25.0% |
| !! | ACTTGTCTTTTCAATTGATT+TGG | + | chr7.3:6324253-6324272 | MS.gene06984:intron | 25.0% |
| !! | CAATCTATTTTCACATAATG+AGG | - | chr7.3:6325104-6325123 | None:intergenic | 25.0% |
| !!! | AAGATCAACTTTGGAATTTT+TGG | - | chr7.3:6324701-6324720 | None:intergenic | 25.0% |
| !!! | CATGATACTTAGATTTTTTG+TGG | + | chr7.3:6325996-6326015 | MS.gene06984:intron | 25.0% |
| !!! | GACAATGTAGCTTTAAATAT+TGG | + | chr7.3:6326591-6326610 | MS.gene06984:intron | 25.0% |
| AAACAAGTCGTCAAATTCAA+AGG | - | chr7.3:6324303-6324322 | None:intergenic | 30.0% | |
| AAAGTTCGTTGTTAACATGA+GGG | + | chr7.3:6326621-6326640 | MS.gene06984:intron | 30.0% | |
| AACAAGTCGTCAAATTCAAA+GGG | - | chr7.3:6324302-6324321 | None:intergenic | 30.0% | |
| ATGTCAAGCAACTAAGAAAA+AGG | - | chr7.3:6326931-6326950 | None:intergenic | 30.0% | |
| CAACGTAAAACATCAATAGA+AGG | - | chr7.3:6325592-6325611 | None:intergenic | 30.0% | |
| CATTCAGGTAAACATTCATA+AGG | - | chr7.3:6324850-6324869 | None:intergenic | 30.0% | |
| CTATGTCCTAAAATGAAAGA+TGG | + | chr7.3:6324823-6324842 | MS.gene06984:intron | 30.0% | |
| GACACTTCTTGATCTATAAT+TGG | - | chr7.3:6327076-6327095 | None:intergenic | 30.0% | |
| GTACAGTAAATGTAAACAAG+AGG | + | chr7.3:6326283-6326302 | MS.gene06984:intron | 30.0% | |
| TAAAGTTCGTTGTTAACATG+AGG | + | chr7.3:6326620-6326639 | MS.gene06984:intron | 30.0% | |
| TGATCTATAATTGGGAAACA+CGG | - | chr7.3:6327067-6327086 | None:intergenic | 30.0% | |
| TTAAGGAAACCAAAAGTAGT+AGG | + | chr7.3:6325396-6325415 | MS.gene06984:intron | 30.0% | |
| ! | ATATGCTTTTATGTAGAAGC+AGG | + | chr7.3:6326537-6326556 | MS.gene06984:intron | 30.0% |
| ! | ATGAGCATCTAGTTCAAAAA+AGG | - | chr7.3:6326992-6327011 | None:intergenic | 30.0% |
| ! | TAAGGACCATCTTTCATTTT+AGG | - | chr7.3:6324832-6324851 | None:intergenic | 30.0% |
| ! | TGAGCATCTAGTTCAAAAAA+GGG | - | chr7.3:6326991-6327010 | None:intergenic | 30.0% |
| ! | TTACCTGAATGAGTTGAATA+AGG | + | chr7.3:6324859-6324878 | MS.gene06984:intron | 30.0% |
| ! | TTTTTCTTAGTTGCTTGACA+TGG | + | chr7.3:6326930-6326949 | MS.gene06984:intron | 30.0% |
| !! | CTATTTCTAACCTCTTCAAT+TGG | + | chr7.3:6325497-6325516 | MS.gene06984:intron | 30.0% |
| !!! | AAGCATTTTTAGAATGGTTG+TGG | + | chr7.3:6324920-6324939 | MS.gene06984:intron | 30.0% |
| !!! | CTGTTTTAAAATGGATGTGT+TGG | + | chr7.3:6324560-6324579 | MS.gene06984:intron | 30.0% |
| ACTACTGTGTTCATATGCAT+TGG | + | chr7.3:6326239-6326258 | MS.gene06984:intron | 35.0% | |
| AGTCCTTATTCAACTCATTC+AGG | - | chr7.3:6324865-6324884 | None:intergenic | 35.0% | |
| ATCTGCATCAATTACCATAG+AGG | - | chr7.3:6324423-6324442 | None:intergenic | 35.0% | |
| ATGCTTTGCTTGCAAAGATA+TGG | + | chr7.3:6324945-6324964 | MS.gene06984:intron | 35.0% | |
| CCAAGCTTATGTGATGAAAT+CGG | - | chr7.3:6324192-6324211 | None:intergenic | 35.0% | |
| CTAATTTACGTTAAGTCCCA+AGG | - | chr7.3:6326217-6326236 | None:intergenic | 35.0% | |
| CTGTTTATGCACATGATACT+TGG | + | chr7.3:6325958-6325977 | MS.gene06984:intron | 35.0% | |
| CTTATGTGATGAAATCGGAA+GGG | - | chr7.3:6324187-6324206 | None:intergenic | 35.0% | |
| CTTTGACAAGGTTAATGTAG+AGG | + | chr7.3:6324795-6324814 | MS.gene06984:CDS | 35.0% | |
| GAAAAGGTAAAATCACCTTC+TGG | - | chr7.3:6324727-6324746 | None:intergenic | 35.0% | |
| GAAATCTGATCGAATTGTCT+CGG | + | chr7.3:6325219-6325238 | MS.gene06984:intron | 35.0% | |
| GATCTATAATTGGGAAACAC+GGG | - | chr7.3:6327066-6327085 | None:intergenic | 35.0% | |
| GTAAAATTCCATCTGTCCAA+TGG | - | chr7.3:6325539-6325558 | None:intergenic | 35.0% | |
| GTAATTGATGCAGATTGTGA+TGG | + | chr7.3:6324428-6324447 | MS.gene06984:intron | 35.0% | |
| TCAAAGGGTGAGTAACAAAT+CGG | - | chr7.3:6324287-6324306 | None:intergenic | 35.0% | |
| TGTGTACTACTGCAGAAATT+CGG | + | chr7.3:6325619-6325638 | MS.gene06984:intron | 35.0% | |
| TTCCTTAACAAGTGCCTTAA+GGG | - | chr7.3:6325384-6325403 | None:intergenic | 35.0% | |
| TTCTAACCTCTTCAATTGGT+GGG | + | chr7.3:6325501-6325520 | MS.gene06984:intron | 35.0% | |
| TTGGGACCGAAAATTGTAAA+GGG | + | chr7.3:6326375-6326394 | MS.gene06984:intron | 35.0% | |
| TTTCCTTAACAAGTGCCTTA+AGG | - | chr7.3:6325385-6325404 | None:intergenic | 35.0% | |
| TTTCTAACCTCTTCAATTGG+TGG | + | chr7.3:6325500-6325519 | MS.gene06984:intron | 35.0% | |
| ! | AAAGTTGATCTTACTCCAGA+AGG | + | chr7.3:6324709-6324728 | MS.gene06984:CDS | 35.0% |
| ! | GAAGGTGATTTTACCTTTTC+TGG | + | chr7.3:6324727-6324746 | MS.gene06984:CDS | 35.0% |
| ! | GAGCATCTAGTTCAAAAAAG+GGG | - | chr7.3:6326990-6327009 | None:intergenic | 35.0% |
| ! | GGAGATCCCTTTACAATTTT+CGG | - | chr7.3:6326384-6326403 | None:intergenic | 35.0% |
| !! | ACAAAATGTTAGGGGTATCT+TGG | + | chr7.3:6324378-6324397 | MS.gene06984:intron | 35.0% |
| !! | TTCTGGAGTAAGATCAACTT+TGG | - | chr7.3:6324710-6324729 | None:intergenic | 35.0% |
| !!! | TTTTTTACATTGGCCCAAGT+CGG | + | chr7.3:6326443-6326462 | MS.gene06984:intron | 35.0% |
| AGTTGCTTGACATGGCTATT+GGG | + | chr7.3:6326938-6326957 | MS.gene06984:intron | 40.0% | |
| CAAAAGTAGTAGGCTTGCAT+TGG | + | chr7.3:6325406-6325425 | MS.gene06984:intron | 40.0% | |
| CATATTCTGTGTAGTGCAGA+AGG | + | chr7.3:6325031-6325050 | MS.gene06984:CDS | 40.0% | |
| CCGATTTCATCACATAAGCT+TGG | + | chr7.3:6324189-6324208 | MS.gene06984:intron | 40.0% | |
| CGTTGTTAACATGAGGGTTA+AGG | + | chr7.3:6326627-6326646 | MS.gene06984:intron | 40.0% | |
| CTGCAATCAAAGAGTCATGA+AGG | - | chr7.3:6324982-6325001 | None:intergenic | 40.0% | |
| CTTCATGACTCTTTGATTGC+AGG | + | chr7.3:6324980-6324999 | MS.gene06984:intron | 40.0% | |
| CTTGGGACCGAAAATTGTAA+AGG | + | chr7.3:6326374-6326393 | MS.gene06984:intron | 40.0% | |
| GAAACTTGAGCTCTTTGACA+AGG | + | chr7.3:6324783-6324802 | MS.gene06984:CDS | 40.0% | |
| GAAAGGGGGTTAAAGAAAAG+AGG | + | chr7.3:6326844-6326863 | MS.gene06984:intron | 40.0% | |
| GATATGATCCATTGGACAGA+TGG | + | chr7.3:6325528-6325547 | MS.gene06984:intron | 40.0% | |
| GCAGATTGTGATGGCAAATT+TGG | + | chr7.3:6324437-6324456 | MS.gene06984:intron | 40.0% | |
| GCTTATGTGATGAAATCGGA+AGG | - | chr7.3:6324188-6324207 | None:intergenic | 40.0% | |
| TAAATGGGTCGATGAAGATG+AGG | + | chr7.3:6325127-6325146 | MS.gene06984:CDS | 40.0% | |
| TAGTTGCTTGACATGGCTAT+TGG | + | chr7.3:6326937-6326956 | MS.gene06984:intron | 40.0% | |
| TCTAACCTCTTCAATTGGTG+GGG | + | chr7.3:6325502-6325521 | MS.gene06984:intron | 40.0% | |
| TGTGTACTGCAGAAATTTGC+TGG | + | chr7.3:6325842-6325861 | MS.gene06984:intron | 40.0% | |
| ! | CAATGCAAGCCTACTACTTT+TGG | - | chr7.3:6325408-6325427 | None:intergenic | 40.0% |
| ! | CGAATTGTCTCGGTTTTTGT+TGG | + | chr7.3:6325229-6325248 | MS.gene06984:intron | 40.0% |
| ! | GTGTACTGCAGAAATTTGCT+GGG | + | chr7.3:6325843-6325862 | MS.gene06984:intron | 40.0% |
| ! | TTTTTACATTGGCCCAAGTC+GGG | + | chr7.3:6326444-6326463 | MS.gene06984:intron | 40.0% |
| !! | CAATTTGAGGGCATTCACTT+GGG | + | chr7.3:6326822-6326841 | MS.gene06984:intron | 40.0% |
| !! | GGTCGCAAGCATTTTTAGAA+TGG | + | chr7.3:6324914-6324933 | MS.gene06984:intron | 40.0% |
| !! | TCAATTTGAGGGCATTCACT+TGG | + | chr7.3:6326821-6326840 | MS.gene06984:intron | 40.0% |
| !! | TTTACCTTTTCTGGTAGTGC+TGG | + | chr7.3:6324736-6324755 | MS.gene06984:CDS | 40.0% |
| AAATGCCACAAGTGCCCTTA+AGG | + | chr7.3:6325367-6325386 | MS.gene06984:intron | 45.0% | |
| AATTACGTTGCAGCGAACCT+TGG | + | chr7.3:6326197-6326216 | MS.gene06984:intron | 45.0% | |
| ATTACGTTGCAGCGAACCTT+GGG | + | chr7.3:6326198-6326217 | MS.gene06984:intron | 45.0% | |
| ATTGACGAGAGTGACGATGA+AGG | + | chr7.3:6325890-6325909 | MS.gene06984:CDS | 45.0% | |
| CAGGAGAGCAAAATCAGTGT+AGG | + | chr7.3:6324999-6325018 | MS.gene06984:intron | 45.0% | |
| CGCTGCAACGTAATTCTAAG+AGG | - | chr7.3:6326192-6326211 | None:intergenic | 45.0% | |
| GATGAAGATGAGGCTGAAGA+AGG | + | chr7.3:6325137-6325156 | MS.gene06984:CDS | 45.0% | |
| GATGATCCAATGGGAGGAAT+GGG | + | chr7.3:6325655-6325674 | MS.gene06984:CDS | 45.0% | |
| GTACTACTGCAGAAATTCGG+CGG | + | chr7.3:6325622-6325641 | MS.gene06984:intron | 45.0% | |
| TACTACTGCAGAAATTCGGC+GGG | + | chr7.3:6325623-6325642 | MS.gene06984:intron | 45.0% | |
| TGATGATCCAATGGGAGGAA+TGG | + | chr7.3:6325654-6325673 | MS.gene06984:CDS | 45.0% | |
| TGGGGTGTGATATGATCCAT+TGG | + | chr7.3:6325520-6325539 | MS.gene06984:intron | 45.0% | |
| ! | AAGGATGTTAGCTCGAGTTG+CGG | + | chr7.3:6326646-6326665 | MS.gene06984:intron | 45.0% |
| ! | ATGGGTGGTGATGATCCAAT+GGG | + | chr7.3:6325646-6325665 | MS.gene06984:CDS | 45.0% |
| ! | CTTGGGAGGAATGGATTTCT+CGG | + | chr7.3:6325272-6325291 | MS.gene06984:CDS | 45.0% |
| ! | TGATACTAGCCTGCTTATGC+TGG | + | chr7.3:6324890-6324909 | MS.gene06984:intron | 45.0% |
| ! | TGCCCTTAAGGCACTTGTTA+AGG | + | chr7.3:6325379-6325398 | MS.gene06984:intron | 45.0% |
| ! | TGTCTCGGTTTTTGTTGGTC+AGG | + | chr7.3:6325234-6325253 | MS.gene06984:intron | 45.0% |
| !! | ACTGCAGAAATTTGCTGGGA+TGG | + | chr7.3:6325847-6325866 | MS.gene06984:intron | 45.0% |
| !! | CTGCAGAAATTTGCTGGGAT+GGG | + | chr7.3:6325848-6325867 | MS.gene06984:intron | 45.0% |
| !! | GATCAAGAAGTGTCAAAGCC+TGG | + | chr7.3:6327082-6327101 | MS.gene06984:intron | 45.0% |
| !! | TGATGTTGACTTGGGAGGAA+TGG | + | chr7.3:6325263-6325282 | MS.gene06984:CDS | 45.0% |
| !!! | ATAATAAGATAATAATTTTT+CGG | - | chr7.3:6326406-6326425 | None:intergenic | 5.0% |
| AAATTTGTCCGGTCCCGACT+TGG | - | chr7.3:6326460-6326479 | None:intergenic | 50.0% | |
| AATGGAAGGACTGGGAGGAA+TGG | + | chr7.3:6325738-6325757 | MS.gene06984:CDS | 50.0% | |
| AATTTGTCCGGTCCCGACTT+GGG | - | chr7.3:6326459-6326478 | None:intergenic | 50.0% | |
| AGCACCAGCACTACCAGAAA+AGG | - | chr7.3:6324743-6324762 | None:intergenic | 50.0% | |
| ATGGGAGGAATGGAAGGACT+GGG | + | chr7.3:6325730-6325749 | MS.gene06984:CDS | 50.0% | |
| GGTCTACATCACAGTGCAGT+TGG | + | chr7.3:6324669-6324688 | MS.gene06984:CDS | 50.0% | |
| TCACACCCCACCAATTGAAG+AGG | - | chr7.3:6325510-6325529 | None:intergenic | 50.0% | |
| TCGTCATCCCGAGGTTAAGT+GGG | + | chr7.3:6324630-6324649 | MS.gene06984:CDS | 50.0% | |
| TCTCTGTGCCCACTTAACCT+CGG | - | chr7.3:6324641-6324660 | None:intergenic | 50.0% | |
| ! | AGGGCATTCACTTGGGAAAG+GGG | + | chr7.3:6326829-6326848 | MS.gene06984:intron | 50.0% |
| ! | AGGTGGTGGTGATGTTGACT+TGG | + | chr7.3:6325254-6325273 | MS.gene06984:intron | 50.0% |
| ! | CTCGGTTTTTGTTGGTCAGG+TGG | + | chr7.3:6325237-6325256 | MS.gene06984:intron | 50.0% |
| ! | GATGGGTGGTGATGATCCAA+TGG | + | chr7.3:6325645-6325664 | MS.gene06984:CDS | 50.0% |
| ! | GGTTTTTGTTGGTCAGGTGG+TGG | + | chr7.3:6325240-6325259 | MS.gene06984:intron | 50.0% |
| ! | TACTAGCCTGCTTATGCTGG+TGG | + | chr7.3:6324893-6324912 | MS.gene06984:intron | 50.0% |
| !! | AAGTGCCTTAAGGGCACTTG+TGG | - | chr7.3:6325375-6325394 | None:intergenic | 50.0% |
| !! | CAGAAATTTGCTGGGATGGG+TGG | + | chr7.3:6325851-6325870 | MS.gene06984:intron | 50.0% |
| !! | GAGGGCATTCACTTGGGAAA+GGG | + | chr7.3:6326828-6326847 | MS.gene06984:intron | 50.0% |
| !! | GGTGGTGGTGATGTTGACTT+GGG | + | chr7.3:6325255-6325274 | MS.gene06984:intron | 50.0% |
| !! | TGAGGGCATTCACTTGGGAA+AGG | + | chr7.3:6326827-6326846 | MS.gene06984:intron | 50.0% |
| !!! | TTTTCTGGTAGTGCTGGTGC+TGG | + | chr7.3:6324742-6324761 | MS.gene06984:CDS | 50.0% |
| AAGAGGTTGCTGCGTGGAGA+AGG | + | chr7.3:6325071-6325090 | MS.gene06984:CDS | 55.0% | |
| AATGGGAGGAATGGGAGGCA+TGG | + | chr7.3:6325663-6325682 | MS.gene06984:CDS | 55.0% | |
| ACTGCAGAAATTCGGCGGGA+TGG | + | chr7.3:6325627-6325646 | MS.gene06984:intron | 55.0% | |
| AGAAGGCTGAGAGTGGATGG+TGG | + | chr7.3:6325048-6325067 | MS.gene06984:CDS | 55.0% | |
| ATGATGCAGTCGTCATCCCG+AGG | + | chr7.3:6324621-6324640 | MS.gene06984:intron | 55.0% | |
| ATGCCTCCCATTCCTCCCAT+TGG | - | chr7.3:6325664-6325683 | None:intergenic | 55.0% | |
| CATGGGAGGAATGGAAGGAC+TGG | + | chr7.3:6325729-6325748 | MS.gene06984:CDS | 55.0% | |
| CTCTGTGCCCACTTAACCTC+GGG | - | chr7.3:6324640-6324659 | None:intergenic | 55.0% | |
| CTGCAGAAATTCGGCGGGAT+GGG | + | chr7.3:6325628-6325647 | MS.gene06984:intron | 55.0% | |
| GATCCAATGGGAGGAATGGG+AGG | + | chr7.3:6325658-6325677 | MS.gene06984:CDS | 55.0% | |
| GGGCATTCACTTGGGAAAGG+GGG | + | chr7.3:6326830-6326849 | MS.gene06984:intron | 55.0% | |
| GTAGTGCAGAAGGCTGAGAG+TGG | + | chr7.3:6325041-6325060 | MS.gene06984:CDS | 55.0% | |
| GTCGTCATCCCGAGGTTAAG+TGG | + | chr7.3:6324629-6324648 | MS.gene06984:intron | 55.0% | |
| GTGGGCACAGAGAGTAGACA+AGG | + | chr7.3:6324648-6324667 | MS.gene06984:CDS | 55.0% | |
| TGCAGAAGGCTGAGAGTGGA+TGG | + | chr7.3:6325045-6325064 | MS.gene06984:CDS | 55.0% | |
| TTGCGACCACCAGCATAAGC+AGG | - | chr7.3:6324902-6324921 | None:intergenic | 55.0% | |
| ! | AATGGGAGGCATGGGAGGAA+TGG | + | chr7.3:6325720-6325739 | MS.gene06984:CDS | 55.0% |
| ! | ATGGGAGGAATGGGAGGCAT+GGG | + | chr7.3:6325664-6325683 | MS.gene06984:CDS | 55.0% |
| ! | GGTGGTGATGATCCAATGGG+AGG | + | chr7.3:6325649-6325668 | MS.gene06984:CDS | 55.0% |
| ! | GTTAGCTCGAGTTGCGGAAG+TGG | + | chr7.3:6326652-6326671 | MS.gene06984:intron | 55.0% |
| ! | TGGGATGGGTGGTGATGCAA+TGG | + | chr7.3:6325862-6325881 | MS.gene06984:CDS | 55.0% |
| !! | CTGAGAGTGGATGGTGGAAG+AGG | + | chr7.3:6325054-6325073 | MS.gene06984:CDS | 55.0% |
| !! | GGTGGTGATGTTGACTTGGG+AGG | + | chr7.3:6325258-6325277 | MS.gene06984:CDS | 55.0% |
| ACATTGGCCCAAGTCGGGAC+CGG | + | chr7.3:6326449-6326468 | MS.gene06984:intron | 60.0% | |
| CAGAAATTCGGCGGGATGGG+TGG | + | chr7.3:6325631-6325650 | MS.gene06984:intron | 60.0% | |
| CATGGGAGGAATGGGAGGCA+TGG | + | chr7.3:6325711-6325730 | MS.gene06984:CDS | 60.0% | |
| CCAGCAGCATCTTGCTCTCC+AGG | - | chr7.3:6327103-6327122 | None:intergenic | 60.0% | |
| CCTGGAGAGCAAGATGCTGC+TGG | + | chr7.3:6327100-6327119 | MS.gene06984:CDS | 60.0% | |
| GGAGGAATGGAAGGACTGGG+AGG | + | chr7.3:6325733-6325752 | MS.gene06984:CDS | 60.0% | |
| GTTGCTGCGTGGAGAAGGCA+AGG | + | chr7.3:6325076-6325095 | MS.gene06984:CDS | 60.0% | |
| TGGTGGAAGAGGTTGCTGCG+TGG | + | chr7.3:6325065-6325084 | MS.gene06984:CDS | 60.0% | |
| ! | ATGGGGGGCATGGGAGGAAT+GGG | + | chr7.3:6325703-6325722 | MS.gene06984:CDS | 60.0% |
| ! | CGGCTTGGGAGGAATGATGG+GGG | + | chr7.3:6325687-6325706 | MS.gene06984:CDS | 60.0% |
| ! | GCGGCTTGGGAGGAATGATG+GGG | + | chr7.3:6325686-6325705 | MS.gene06984:CDS | 60.0% |
| ! | GGAGGAATGATGGGGGGCAT+GGG | + | chr7.3:6325694-6325713 | MS.gene06984:CDS | 60.0% |
| ! | GGAGGCATGGGAGGAATGGA+AGG | + | chr7.3:6325724-6325743 | MS.gene06984:CDS | 60.0% |
| ! | GGCGGCTTGGGAGGAATGAT+GGG | + | chr7.3:6325685-6325704 | MS.gene06984:CDS | 60.0% |
| ! | GGCTTGGGAGGAATGATGGG+GGG | + | chr7.3:6325688-6325707 | MS.gene06984:CDS | 60.0% |
| ! | AATGGGAGGCATGGGCGGCT+TGG | + | chr7.3:6325672-6325691 | MS.gene06984:CDS | 65.0% |
| ! | ATGGGAGGCATGGGCGGCTT+GGG | + | chr7.3:6325673-6325692 | MS.gene06984:CDS | 65.0% |
| ! | GATGCTGCTGGCAAGAGCGC+TGG | + | chr7.3:6327112-6327131 | MS.gene06984:CDS | 65.0% |
| ! | GATGGGGGGCATGGGAGGAA+TGG | + | chr7.3:6325702-6325721 | MS.gene06984:CDS | 65.0% |
| ! | GGAATGATGGGGGGCATGGG+AGG | + | chr7.3:6325697-6325716 | MS.gene06984:CDS | 65.0% |
| ! | GGAGGAATGGGAGGCATGGG+AGG | + | chr7.3:6325667-6325686 | MS.gene06984:CDS | 65.0% |
| ! | GGAGGAATGGGAGGCATGGG+CGG | + | chr7.3:6325667-6325686 | MS.gene06984:CDS | 65.0% |
| ! | GGGAGGAATGATGGGGGGCA+TGG | + | chr7.3:6325693-6325712 | MS.gene06984:CDS | 65.0% |
| ! | GGGCGGCTTGGGAGGAATGA+TGG | + | chr7.3:6325684-6325703 | MS.gene06984:CDS | 65.0% |
| !! | TGCTGGCAAGAGCGCTGGTG+AGG | + | chr7.3:6327117-6327136 | MS.gene06984:CDS | 65.0% |
| ! | GGGGGCATGGGAGGAATGGG+AGG | + | chr7.3:6325706-6325725 | MS.gene06984:CDS | 70.0% |
| ! | GGAGGCATGGGCGGCTTGGG+AGG | + | chr7.3:6325676-6325695 | MS.gene06984:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 6324112 | 6327180 | 6324112 | ID=MS.gene06984 |
| chr7.3 | mRNA | 6324112 | 6327180 | 6324112 | ID=MS.gene06984.t1;Parent=MS.gene06984 |
| chr7.3 | exon | 6324112 | 6324116 | 6324112 | ID=MS.gene06984.t1.exon1;Parent=MS.gene06984.t1 |
| chr7.3 | CDS | 6324112 | 6324116 | 6324112 | ID=cds.MS.gene06984.t1;Parent=MS.gene06984.t1 |
| chr7.3 | exon | 6324630 | 6324816 | 6324630 | ID=MS.gene06984.t1.exon2;Parent=MS.gene06984.t1 |
| chr7.3 | CDS | 6324630 | 6324816 | 6324630 | ID=cds.MS.gene06984.t1;Parent=MS.gene06984.t1 |
| chr7.3 | exon | 6325002 | 6325158 | 6325002 | ID=MS.gene06984.t1.exon3;Parent=MS.gene06984.t1 |
| chr7.3 | CDS | 6325002 | 6325158 | 6325002 | ID=cds.MS.gene06984.t1;Parent=MS.gene06984.t1 |
| chr7.3 | exon | 6325256 | 6325293 | 6325256 | ID=MS.gene06984.t1.exon4;Parent=MS.gene06984.t1 |
| chr7.3 | CDS | 6325256 | 6325293 | 6325256 | ID=cds.MS.gene06984.t1;Parent=MS.gene06984.t1 |
| chr7.3 | exon | 6325634 | 6325768 | 6325634 | ID=MS.gene06984.t1.exon5;Parent=MS.gene06984.t1 |
| chr7.3 | CDS | 6325634 | 6325768 | 6325634 | ID=cds.MS.gene06984.t1;Parent=MS.gene06984.t1 |
| chr7.3 | exon | 6325854 | 6325911 | 6325854 | ID=MS.gene06984.t1.exon6;Parent=MS.gene06984.t1 |
| chr7.3 | CDS | 6325854 | 6325911 | 6325854 | ID=cds.MS.gene06984.t1;Parent=MS.gene06984.t1 |
| chr7.3 | exon | 6327083 | 6327180 | 6327083 | ID=MS.gene06984.t1.exon7;Parent=MS.gene06984.t1 |
| chr7.3 | CDS | 6327083 | 6327180 | 6327083 | ID=cds.MS.gene06984.t1;Parent=MS.gene06984.t1 |
| Gene Sequence |
| Protein sequence |
