Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062332.t1 | XP_003617472.1 | 91.9 | 248 | 20 | 0 | 1 | 248 | 1 | 248 | 9.70E-126 | 459.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062332.t1 | Q4UKR8 | 34.1 | 88 | 51 | 1 | 160 | 247 | 50 | 130 | 8.3e-09 | 62.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062332.t1 | G7K3F3 | 91.9 | 248 | 20 | 0 | 1 | 248 | 1 | 248 | 7.0e-126 | 459.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene062332 | 0.803967 | 2.71E-49 | -1.69E-46 |
| MS.gene049171 | MS.gene062332 | 0.863629 | 2.17E-64 | -1.69E-46 |
| MS.gene049222 | MS.gene062332 | 0.819427 | 1.17E-52 | -1.69E-46 |
| MS.gene049257 | MS.gene062332 | 0.812232 | 4.70E-51 | -1.69E-46 |
| MS.gene049285 | MS.gene062332 | 0.828137 | 1.06E-54 | -1.69E-46 |
| MS.gene049320 | MS.gene062332 | 0.811369 | 7.25E-51 | -1.69E-46 |
| MS.gene04939 | MS.gene062332 | 0.800051 | 1.73E-48 | -1.69E-46 |
| MS.gene049609 | MS.gene062332 | 0.820675 | 6.05E-53 | -1.69E-46 |
| MS.gene049633 | MS.gene062332 | 0.825333 | 4.96E-54 | -1.69E-46 |
| MS.gene050163 | MS.gene062332 | 0.80461 | 1.99E-49 | -1.69E-46 |
| MS.gene050165 | MS.gene062332 | 0.804767 | 1.84E-49 | -1.69E-46 |
| MS.gene050170 | MS.gene062332 | 0.843922 | 1.04E-58 | -1.69E-46 |
| MS.gene050338 | MS.gene062332 | -0.820466 | 6.76E-53 | -1.69E-46 |
| MS.gene050444 | MS.gene062332 | 0.83421 | 3.42E-56 | -1.69E-46 |
| MS.gene050504 | MS.gene062332 | 0.814546 | 1.46E-51 | -1.69E-46 |
| MS.gene050507 | MS.gene062332 | 0.831725 | 1.42E-55 | -1.69E-46 |
| MS.gene050577 | MS.gene062332 | 0.840369 | 9.06E-58 | -1.69E-46 |
| MS.gene050612 | MS.gene062332 | 0.824562 | 7.55E-54 | -1.69E-46 |
| MS.gene050675 | MS.gene062332 | 0.802054 | 6.73E-49 | -1.69E-46 |
| MS.gene050699 | MS.gene062332 | 0.841821 | 3.77E-58 | -1.69E-46 |
| MS.gene050747 | MS.gene062332 | 0.808414 | 3.13E-50 | -1.69E-46 |
| MS.gene050772 | MS.gene062332 | 0.80221 | 6.25E-49 | -1.69E-46 |
| MS.gene05080 | MS.gene062332 | 0.815062 | 1.12E-51 | -1.69E-46 |
| MS.gene05081 | MS.gene062332 | 0.851371 | 9.27E-61 | -1.69E-46 |
| MS.gene050904 | MS.gene062332 | 0.819528 | 1.11E-52 | -1.69E-46 |
| MS.gene050950 | MS.gene062332 | 0.807983 | 3.87E-50 | -1.69E-46 |
| MS.gene050986 | MS.gene062332 | 0.806463 | 8.13E-50 | -1.69E-46 |
| MS.gene051244 | MS.gene062332 | 0.804964 | 1.68E-49 | -1.69E-46 |
| MS.gene051317 | MS.gene062332 | 0.854952 | 8.74E-62 | -1.69E-46 |
| MS.gene051552 | MS.gene062332 | -0.813553 | 2.41E-51 | -1.69E-46 |
| MS.gene051617 | MS.gene062332 | 0.813034 | 3.14E-51 | -1.69E-46 |
| MS.gene051651 | MS.gene062332 | -0.807127 | 5.88E-50 | -1.69E-46 |
| MS.gene051749 | MS.gene062332 | -0.816316 | 5.89E-52 | -1.69E-46 |
| MS.gene051838 | MS.gene062332 | 0.859211 | 4.84E-63 | -1.69E-46 |
| MS.gene051973 | MS.gene062332 | -0.818962 | 1.49E-52 | -1.69E-46 |
| MS.gene052050 | MS.gene062332 | -0.803372 | 3.60E-49 | -1.69E-46 |
| MS.gene052129 | MS.gene062332 | -0.836905 | 7.12E-57 | -1.69E-46 |
| MS.gene052164 | MS.gene062332 | 0.802535 | 5.36E-49 | -1.69E-46 |
| MS.gene052469 | MS.gene062332 | 0.824712 | 6.96E-54 | -1.69E-46 |
| MS.gene052501 | MS.gene062332 | 0.804407 | 2.19E-49 | -1.69E-46 |
| MS.gene052503 | MS.gene062332 | 0.834733 | 2.53E-56 | -1.69E-46 |
| MS.gene052505 | MS.gene062332 | 0.802112 | 6.55E-49 | -1.69E-46 |
| MS.gene052606 | MS.gene062332 | -0.81704 | 4.05E-52 | -1.69E-46 |
| MS.gene052823 | MS.gene062332 | 0.833726 | 4.52E-56 | -1.69E-46 |
| MS.gene052825 | MS.gene062332 | 0.831615 | 1.51E-55 | -1.69E-46 |
| MS.gene052870 | MS.gene062332 | 0.841253 | 5.32E-58 | -1.69E-46 |
| MS.gene052872 | MS.gene062332 | 0.855833 | 4.84E-62 | -1.69E-46 |
| MS.gene053203 | MS.gene062332 | 0.823633 | 1.25E-53 | -1.69E-46 |
| MS.gene053479 | MS.gene062332 | 0.838887 | 2.20E-57 | -1.69E-46 |
| MS.gene053480 | MS.gene062332 | 0.836879 | 7.22E-57 | -1.69E-46 |
| MS.gene053579 | MS.gene062332 | 0.803838 | 2.88E-49 | -1.69E-46 |
| MS.gene053632 | MS.gene062332 | 0.811093 | 8.32E-51 | -1.69E-46 |
| MS.gene053824 | MS.gene062332 | 0.841734 | 3.97E-58 | -1.69E-46 |
| MS.gene054107 | MS.gene062332 | 0.816175 | 6.33E-52 | -1.69E-46 |
| MS.gene054343 | MS.gene062332 | 0.861238 | 1.18E-63 | -1.69E-46 |
| MS.gene054344 | MS.gene062332 | 0.863117 | 3.13E-64 | -1.69E-46 |
| MS.gene054600 | MS.gene062332 | 0.807353 | 5.27E-50 | -1.69E-46 |
| MS.gene054642 | MS.gene062332 | 0.800054 | 1.73E-48 | -1.69E-46 |
| MS.gene05470 | MS.gene062332 | 0.886355 | 3.68E-72 | -1.69E-46 |
| MS.gene054884 | MS.gene062332 | -0.863274 | 2.80E-64 | -1.69E-46 |
| MS.gene054954 | MS.gene062332 | 0.809731 | 1.64E-50 | -1.69E-46 |
| MS.gene055206 | MS.gene062332 | 0.812101 | 5.02E-51 | -1.69E-46 |
| MS.gene055362 | MS.gene062332 | 0.823771 | 1.16E-53 | -1.69E-46 |
| MS.gene055370 | MS.gene062332 | 0.823071 | 1.69E-53 | -1.69E-46 |
| MS.gene055502 | MS.gene062332 | 0.823702 | 1.20E-53 | -1.69E-46 |
| MS.gene055577 | MS.gene062332 | 0.835203 | 1.92E-56 | -1.69E-46 |
| MS.gene055731 | MS.gene062332 | -0.812752 | 3.62E-51 | -1.69E-46 |
| MS.gene055748 | MS.gene062332 | 0.874894 | 4.72E-68 | -1.69E-46 |
| MS.gene055750 | MS.gene062332 | 0.817367 | 3.42E-52 | -1.69E-46 |
| MS.gene055751 | MS.gene062332 | 0.862178 | 6.09E-64 | -1.69E-46 |
| MS.gene05589 | MS.gene062332 | 0.859783 | 3.26E-63 | -1.69E-46 |
| MS.gene056266 | MS.gene062332 | 0.821081 | 4.88E-53 | -1.69E-46 |
| MS.gene056504 | MS.gene062332 | 0.816391 | 5.67E-52 | -1.69E-46 |
| MS.gene056590 | MS.gene062332 | -0.808284 | 3.34E-50 | -1.69E-46 |
| MS.gene056591 | MS.gene062332 | -0.810128 | 1.34E-50 | -1.69E-46 |
| MS.gene056633 | MS.gene062332 | 0.848485 | 5.95E-60 | -1.69E-46 |
| MS.gene056657 | MS.gene062332 | 0.800964 | 1.13E-48 | -1.69E-46 |
| MS.gene056664 | MS.gene062332 | 0.824486 | 7.87E-54 | -1.69E-46 |
| MS.gene056678 | MS.gene062332 | -0.824071 | 9.85E-54 | -1.69E-46 |
| MS.gene056692 | MS.gene062332 | 0.847263 | 1.29E-59 | -1.69E-46 |
| MS.gene056694 | MS.gene062332 | -0.816542 | 5.24E-52 | -1.69E-46 |
| MS.gene056697 | MS.gene062332 | -0.819227 | 1.30E-52 | -1.69E-46 |
| MS.gene056748 | MS.gene062332 | -0.801397 | 9.18E-49 | -1.69E-46 |
| MS.gene056856 | MS.gene062332 | -0.80432 | 2.29E-49 | -1.69E-46 |
| MS.gene056877 | MS.gene062332 | 0.80203 | 6.81E-49 | -1.69E-46 |
| MS.gene056903 | MS.gene062332 | 0.800596 | 1.34E-48 | -1.69E-46 |
| MS.gene056988 | MS.gene062332 | -0.812049 | 5.15E-51 | -1.69E-46 |
| MS.gene057196 | MS.gene062332 | 0.839443 | 1.58E-57 | -1.69E-46 |
| MS.gene057332 | MS.gene062332 | 0.872584 | 2.84E-67 | -1.69E-46 |
| MS.gene057658 | MS.gene062332 | 0.893904 | 4.07E-75 | -1.69E-46 |
| MS.gene057717 | MS.gene062332 | -0.817133 | 3.86E-52 | -1.69E-46 |
| MS.gene057831 | MS.gene062332 | 0.832121 | 1.13E-55 | -1.69E-46 |
| MS.gene058076 | MS.gene062332 | -0.807391 | 5.17E-50 | -1.69E-46 |
| MS.gene058334 | MS.gene062332 | -0.814689 | 1.36E-51 | -1.69E-46 |
| MS.gene058338 | MS.gene062332 | 0.810327 | 1.22E-50 | -1.69E-46 |
| MS.gene05837 | MS.gene062332 | 0.81773 | 2.83E-52 | -1.69E-46 |
| MS.gene058418 | MS.gene062332 | -0.833148 | 6.30E-56 | -1.69E-46 |
| MS.gene058419 | MS.gene062332 | 0.836189 | 1.08E-56 | -1.69E-46 |
| MS.gene058544 | MS.gene062332 | 0.85854 | 7.68E-63 | -1.69E-46 |
| MS.gene058603 | MS.gene062332 | -0.815814 | 7.62E-52 | -1.69E-46 |
| MS.gene058723 | MS.gene062332 | 0.806119 | 9.60E-50 | -1.69E-46 |
| MS.gene058746 | MS.gene062332 | 0.817487 | 3.22E-52 | -1.69E-46 |
| MS.gene058773 | MS.gene062332 | 0.807199 | 5.68E-50 | -1.69E-46 |
| MS.gene058838 | MS.gene062332 | 0.88838 | 6.21E-73 | -1.69E-46 |
| MS.gene059022 | MS.gene062332 | 0.81532 | 9.82E-52 | -1.69E-46 |
| MS.gene059023 | MS.gene062332 | 0.892177 | 2.02E-74 | -1.69E-46 |
| MS.gene059103 | MS.gene062332 | -0.805565 | 1.26E-49 | -1.69E-46 |
| MS.gene05914 | MS.gene062332 | 0.901121 | 3.69E-78 | -1.69E-46 |
| MS.gene05926 | MS.gene062332 | -0.815025 | 1.14E-51 | -1.69E-46 |
| MS.gene059480 | MS.gene062332 | -0.801531 | 8.62E-49 | -1.69E-46 |
| MS.gene059512 | MS.gene062332 | 0.828455 | 8.91E-55 | -1.69E-46 |
| MS.gene05960 | MS.gene062332 | -0.821389 | 4.14E-53 | -1.69E-46 |
| MS.gene059667 | MS.gene062332 | 0.808449 | 3.08E-50 | -1.69E-46 |
| MS.gene059677 | MS.gene062332 | 0.858064 | 1.06E-62 | -1.69E-46 |
| MS.gene059718 | MS.gene062332 | 0.8175 | 3.19E-52 | -1.69E-46 |
| MS.gene059756 | MS.gene062332 | 0.845491 | 3.93E-59 | -1.69E-46 |
| MS.gene06000 | MS.gene062332 | 0.811164 | 8.03E-51 | -1.69E-46 |
| MS.gene06027 | MS.gene062332 | 0.8072 | 5.68E-50 | -1.69E-46 |
| MS.gene060405 | MS.gene062332 | -0.801761 | 7.73E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene062332 | 0.847163 | 1.38E-59 | -1.69E-46 |
| MS.gene06077 | MS.gene062332 | 0.831472 | 1.64E-55 | -1.69E-46 |
| MS.gene06092 | MS.gene062332 | 0.839277 | 1.75E-57 | -1.69E-46 |
| MS.gene060982 | MS.gene062332 | 0.820106 | 8.17E-53 | -1.69E-46 |
| MS.gene061044 | MS.gene062332 | -0.832823 | 7.59E-56 | -1.69E-46 |
| MS.gene061150 | MS.gene062332 | 0.858777 | 6.53E-63 | -1.69E-46 |
| MS.gene061231 | MS.gene062332 | 0.866994 | 1.90E-65 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062332.t1 | MTR_5g091960 | 91.935 | 248 | 20 | 0 | 1 | 248 | 1 | 248 | 1.13e-170 | 471 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062332.t1 | AT1G06460 | 40.000 | 260 | 126 | 7 | 16 | 248 | 18 | 274 | 7.03e-51 | 167 |
Find 47 sgRNAs with CRISPR-Local
Find 140 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAATACACCATTCTGAAAT+TGG | 0.251394 | 5.1:-73531041 | MS.gene062332:intron |
| CATGGCTCTCTTGCATAATT+AGG | 0.258582 | 5.1:+73531221 | None:intergenic |
| GATTCTGCAACATCCATTCT+TGG | 0.264287 | 5.1:+73530893 | None:intergenic |
| ACGATTGATTCTTTCCTTGC+AGG | 0.285486 | 5.1:+73531188 | None:intergenic |
| CCTTGTATATTCTGTTTGCT+TGG | 0.343416 | 5.1:+73531086 | None:intergenic |
| CGCCAAGCATCTGCTTCCTT+TGG | 0.352894 | 5.1:-73531618 | MS.gene062332:CDS |
| GTAGACGCTCTACTAGTTCT+TGG | 0.370835 | 5.1:-73530520 | MS.gene062332:CDS |
| TATGAAGAAAATGAAGCATT+TGG | 0.403591 | 5.1:+73530482 | None:intergenic |
| GCTTAGGAGATGTGACAATA+AGG | 0.409685 | 5.1:-73531652 | MS.gene062332:CDS |
| ATCTACCCATCTTCTGCCTA+TGG | 0.436149 | 5.1:-73532468 | MS.gene062332:intron |
| ATGGACCATATGAGGTTGTT+TGG | 0.454708 | 5.1:-73530439 | MS.gene062332:CDS |
| AATTGAGTGGTCACCAAGAA+TGG | 0.455876 | 5.1:-73530906 | MS.gene062332:CDS |
| CTTGCAGGTCTTGCAAAACA+TGG | 0.457049 | 5.1:+73531203 | None:intergenic |
| GTTATCATGGTAGAAGTTCC+TGG | 0.470836 | 5.1:-73530857 | MS.gene062332:CDS |
| AGTGGCCAAACAACCTCATA+TGG | 0.481163 | 5.1:+73530434 | None:intergenic |
| ACTAGTTCTTGGAGAGAAGC+AGG | 0.485633 | 5.1:-73530509 | MS.gene062332:CDS |
| AGATTACCATAGGCAGAAGA+TGG | 0.487818 | 5.1:+73532462 | None:intergenic |
| AGAAAGTAAATATGTTATCA+TGG | 0.491749 | 5.1:-73530870 | MS.gene062332:CDS |
| ACCAATGTGGCTAAATATGA+AGG | 0.493398 | 5.1:-73531245 | MS.gene062332:CDS |
| GGTAGATGAAATCTCATCAA+TGG | 0.494193 | 5.1:+73532484 | None:intergenic |
| GACCAAAGGAAGCAGATGCT+TGG | 0.495821 | 5.1:+73531616 | None:intergenic |
| CACAAGAGGGAGATACTGTA+TGG | 0.508140 | 5.1:-73530458 | MS.gene062332:CDS |
| GTAGTCTGAACTCTGTGCTT+AGG | 0.510140 | 5.1:-73531668 | MS.gene062332:CDS |
| CTCATCAATGGAAGCAAAGT+GGG | 0.522175 | 5.1:+73532496 | None:intergenic |
| TTGTTCACACGAGGAGGAAG+TGG | 0.523682 | 5.1:+73530416 | None:intergenic |
| GATACTGTATGGACCATATG+AGG | 0.529593 | 5.1:-73530447 | MS.gene062332:CDS |
| ACCTTCATATTTAGCCACAT+TGG | 0.536522 | 5.1:+73531244 | None:intergenic |
| CCAAGCAAACAGAATATACA+AGG | 0.537645 | 5.1:-73531086 | MS.gene062332:CDS |
| TTTGACAGATTGTCGATCAA+AGG | 0.549000 | 5.1:-73530542 | MS.gene062332:intron |
| GCTAATCACCAATTTCAGAA+TGG | 0.565371 | 5.1:+73531033 | None:intergenic |
| GCTAGAAATGGAGAATGAGT+TGG | 0.569649 | 5.1:-73532546 | None:intergenic |
| TTGCTTGGCCTAGAAAATGA+AGG | 0.570216 | 5.1:+73531101 | None:intergenic |
| ACTTCCTCCTCGTGTGAACA+AGG | 0.571990 | 5.1:-73530414 | MS.gene062332:CDS |
| GAGGCAGACATCAGCTGAAG+AGG | 0.577256 | 5.1:-73531586 | MS.gene062332:intron |
| GAAGTTCCTGGTGTCAGTGT+TGG | 0.578935 | 5.1:-73530845 | MS.gene062332:CDS |
| GATTACCATAGGCAGAAGAT+GGG | 0.610033 | 5.1:+73532463 | None:intergenic |
| CTGCCTCATAAAATGACCAA+AGG | 0.623308 | 5.1:+73531602 | None:intergenic |
| TCTCATCAATGGAAGCAAAG+TGG | 0.624749 | 5.1:+73532495 | None:intergenic |
| CAACCAATGACTAAAATGCA+AGG | 0.630284 | 5.1:-73531149 | MS.gene062332:CDS |
| TTGTCCTTGTTCACACGAGG+AGG | 0.635624 | 5.1:+73530410 | None:intergenic |
| ATGTCACCAACACTGACACC+AGG | 0.643081 | 5.1:+73530839 | None:intergenic |
| CTTGGCCTAGAAAATGAAGG+TGG | 0.645955 | 5.1:+73531104 | None:intergenic |
| CAGTGTTGGTGACATAAGAG+TGG | 0.652239 | 5.1:-73530831 | MS.gene062332:CDS |
| TCTCCCTATCAGAATTGCAG+TGG | 0.660004 | 5.1:-73531690 | MS.gene062332:intron |
| ACATTGTCCTTGTTCACACG+AGG | 0.684915 | 5.1:+73530407 | None:intergenic |
| TGTTGCTCCTAAAACCAATG+TGG | 0.717404 | 5.1:-73531258 | MS.gene062332:CDS |
| TGTTGGTGACATAAGAGTGG+AGG | 0.734282 | 5.1:-73530828 | MS.gene062332:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGATTACAAGTTATAATATA+TGG | - | chr5.1:73531938-73531957 | MS.gene062332:intron | 15.0% |
| !! | TGTAATTATTAACTTTACAT+CGG | - | chr5.1:73531604-73531623 | MS.gene062332:CDS | 15.0% |
| !!! | AATTATGATCATTTTGAAAA+AGG | + | chr5.1:73531020-73531039 | None:intergenic | 15.0% |
| !!! | ATTGGTAATATTTATAACTT+TGG | - | chr5.1:73530579-73530598 | MS.gene062332:intron | 15.0% |
| !!! | TTTTTCAAAATGATCATAAT+TGG | - | chr5.1:73531019-73531038 | MS.gene062332:intron | 15.0% |
| !! | AAAATACCGAAATTGAAATT+TGG | + | chr5.1:73531476-73531495 | None:intergenic | 20.0% |
| !! | AATATGGAAATTCTGAATTA+GGG | + | chr5.1:73530718-73530737 | None:intergenic | 20.0% |
| !! | AGAAAGTAAATATGTTATCA+TGG | - | chr5.1:73532057-73532076 | MS.gene062332:intron | 20.0% |
| !! | ATCAAAAATAGGATAACAAT+TGG | + | chr5.1:73531177-73531196 | None:intergenic | 20.0% |
| !!! | AATATATGGTTAGCTAAATA+TGG | - | chr5.1:73531952-73531971 | MS.gene062332:intron | 20.0% |
| !!! | GAAAAGTATATATCTTGTAT+TGG | - | chr5.1:73530561-73530580 | MS.gene062332:intron | 20.0% |
| !!! | TTTTTATTGTCTGATTAAGA+AGG | + | chr5.1:73531046-73531065 | None:intergenic | 20.0% |
| ! | AATTATCCTATTAGAAACCA+GGG | - | chr5.1:73531144-73531163 | MS.gene062332:CDS | 25.0% |
| ! | ATACATAAGAGCAATGAATT+TGG | + | chr5.1:73531573-73531592 | None:intergenic | 25.0% |
| ! | ATGATAGATTAGATTACCAT+AGG | + | chr5.1:73530478-73530497 | None:intergenic | 25.0% |
| ! | CAAAAACATATATTGCTTGA+TGG | + | chr5.1:73530846-73530865 | None:intergenic | 25.0% |
| ! | GAAACAAGAAACAAAATTAG+AGG | + | chr5.1:73530781-73530800 | None:intergenic | 25.0% |
| ! | GAAACAGATTCATCAAAAAT+AGG | + | chr5.1:73531188-73531207 | None:intergenic | 25.0% |
| ! | GAATATGGAAATTCTGAATT+AGG | + | chr5.1:73530719-73530738 | None:intergenic | 25.0% |
| ! | TAATTATCCTATTAGAAACC+AGG | - | chr5.1:73531143-73531162 | MS.gene062332:CDS | 25.0% |
| ! | TGATTGATGAACAAACAATT+TGG | + | chr5.1:73531210-73531229 | None:intergenic | 25.0% |
| ! | TTGCAATTTATGGTACTATT+AGG | - | chr5.1:73532318-73532337 | MS.gene062332:intron | 25.0% |
| !! | ATTTTCTTCATATCACAAGA+GGG | - | chr5.1:73532456-73532475 | MS.gene062332:intron | 25.0% |
| !! | TATGAAGAAAATGAAGCATT+TGG | + | chr5.1:73532448-73532467 | None:intergenic | 25.0% |
| !!! | AATAGGATAACAATTGGTTT+TGG | + | chr5.1:73531171-73531190 | None:intergenic | 25.0% |
| !!! | TTTTCTGAAATGGATCAAAT+TGG | + | chr5.1:73531106-73531125 | None:intergenic | 25.0% |
| AATTCCCAAATCTTGAACTT+AGG | + | chr5.1:73530677-73530696 | None:intergenic | 30.0% | |
| AGTTGGAATATGCAATTTCA+TGG | + | chr5.1:73531541-73531560 | None:intergenic | 30.0% | |
| ATAATAGCAAGTGCAGAATA+TGG | + | chr5.1:73530734-73530753 | None:intergenic | 30.0% | |
| ATTCCCAAATCTTGAACTTA+GGG | + | chr5.1:73530676-73530695 | None:intergenic | 30.0% | |
| GATGGTCCAAATTTCAATTT+CGG | - | chr5.1:73531467-73531486 | MS.gene062332:intron | 30.0% | |
| GTATTCATCAATAAGAACAG+TGG | + | chr5.1:73531372-73531391 | None:intergenic | 30.0% | |
| TCCTGTAAAAGGGAAAAAAA+GGG | + | chr5.1:73532002-73532021 | None:intergenic | 30.0% | |
| TTCCTGTAAAAGGGAAAAAA+AGG | + | chr5.1:73532003-73532022 | None:intergenic | 30.0% | |
| ! | ATTTAGTACGACGAATTTTC+AGG | - | chr5.1:73531630-73531649 | MS.gene062332:CDS | 30.0% |
| ! | CATTTTCTTCATATCACAAG+AGG | - | chr5.1:73532455-73532474 | MS.gene062332:intron | 30.0% |
| ! | TTTAGTACGACGAATTTTCA+GGG | - | chr5.1:73531631-73531650 | MS.gene062332:CDS | 30.0% |
| ! | TTTGTGCATGTTTGAAATCA+CGG | - | chr5.1:73530862-73530881 | MS.gene062332:CDS | 30.0% |
| !! | AGAATACACCATTCTGAAAT+TGG | - | chr5.1:73531886-73531905 | MS.gene062332:intron | 30.0% |
| !! | TAATTATTGCTTTTGTTCCC+TGG | + | chr5.1:73531129-73531148 | None:intergenic | 30.0% |
| !!! | TATTTAGCCACATTGGTTTT+AGG | + | chr5.1:73531679-73531698 | None:intergenic | 30.0% |
| AACCAGAGATCAAAAGAGTA+TGG | - | chr5.1:73531073-73531092 | MS.gene062332:CDS | 35.0% | |
| ACCAATGTGGCTAAATATGA+AGG | - | chr5.1:73531682-73531701 | MS.gene062332:intron | 35.0% | |
| ACCACTCAATTCCTGTAAAA+GGG | + | chr5.1:73532012-73532031 | None:intergenic | 35.0% | |
| ACCTTCATATTTAGCCACAT+TGG | + | chr5.1:73531686-73531705 | None:intergenic | 35.0% | |
| ACTGCTCGATATTGATAGAA+TGG | - | chr5.1:73531498-73531517 | MS.gene062332:intron | 35.0% | |
| ATACTCCTCAATATTGCTCT+TGG | - | chr5.1:73531388-73531407 | MS.gene062332:intron | 35.0% | |
| ATCACCCTAAGTTCAAGATT+TGG | - | chr5.1:73530669-73530688 | MS.gene062332:intron | 35.0% | |
| ATGTCGCTCTTTGCAATTTA+TGG | - | chr5.1:73532308-73532327 | MS.gene062332:intron | 35.0% | |
| CAACCAATGACTAAAATGCA+AGG | - | chr5.1:73531778-73531797 | MS.gene062332:intron | 35.0% | |
| CATATCCAAGAGCAATATTG+AGG | + | chr5.1:73531396-73531415 | None:intergenic | 35.0% | |
| CCAAGCAAACAGAATATACA+AGG | - | chr5.1:73531841-73531860 | MS.gene062332:intron | 35.0% | |
| CCTGTAAAAGGGAAAAAAAG+GGG | + | chr5.1:73532001-73532020 | None:intergenic | 35.0% | |
| CCTTGTATATTCTGTTTGCT+TGG | + | chr5.1:73531844-73531863 | None:intergenic | 35.0% | |
| CTCAATATTGCTCTTGGATA+TGG | - | chr5.1:73531394-73531413 | MS.gene062332:intron | 35.0% | |
| GCTAATCACCAATTTCAGAA+TGG | + | chr5.1:73531897-73531916 | None:intergenic | 35.0% | |
| GGTAGATGAAATCTCATCAA+TGG | + | chr5.1:73530446-73530465 | None:intergenic | 35.0% | |
| TCACCCTAAGTTCAAGATTT+GGG | - | chr5.1:73530670-73530689 | MS.gene062332:intron | 35.0% | |
| TGATCCATTTCAGAAAACCA+GGG | - | chr5.1:73531109-73531128 | MS.gene062332:CDS | 35.0% | |
| TTGAATGTAATCGCATGTGT+CGG | + | chr5.1:73532219-73532238 | None:intergenic | 35.0% | |
| TTGATCCATTTCAGAAAACC+AGG | - | chr5.1:73531108-73531127 | MS.gene062332:CDS | 35.0% | |
| TTGTTGATGCTTCAAAGTGT+TGG | - | chr5.1:73530911-73530930 | MS.gene062332:intron | 35.0% | |
| TTTGACAGATTGTCGATCAA+AGG | - | chr5.1:73532385-73532404 | MS.gene062332:intron | 35.0% | |
| ! | ACATTGACACTTTTGATGCA+AGG | - | chr5.1:73532158-73532177 | MS.gene062332:intron | 35.0% |
| !! | CACTTGCTATTATTAGCACA+TGG | - | chr5.1:73530741-73530760 | MS.gene062332:intron | 35.0% |
| !! | CTTCCTTTGGTCATTTTATG+AGG | - | chr5.1:73531322-73531341 | MS.gene062332:intron | 35.0% |
| !! | CTTGCATTTTAGTCATTGGT+TGG | + | chr5.1:73531780-73531799 | None:intergenic | 35.0% |
| !! | TAGCCTTGCATTTTAGTCAT+TGG | + | chr5.1:73531784-73531803 | None:intergenic | 35.0% |
| AATTGAGTGGTCACCAAGAA+TGG | - | chr5.1:73532021-73532040 | MS.gene062332:intron | 40.0% | |
| ACAGTGCATGTTTGAATTGG+TGG | + | chr5.1:73530969-73530988 | None:intergenic | 40.0% | |
| ACTACCACTGCAATTCTGAT+AGG | + | chr5.1:73531244-73531263 | None:intergenic | 40.0% | |
| AGATTACCATAGGCAGAAGA+TGG | + | chr5.1:73530468-73530487 | None:intergenic | 40.0% | |
| ATGGACCATATGAGGTTGTT+TGG | - | chr5.1:73532488-73532507 | MS.gene062332:CDS | 40.0% | |
| CATGGCTCTCTTGCATAATT+AGG | + | chr5.1:73531709-73531728 | None:intergenic | 40.0% | |
| CTACCACTGCAATTCTGATA+GGG | + | chr5.1:73531243-73531262 | None:intergenic | 40.0% | |
| CTCATCAATGGAAGCAAAGT+GGG | + | chr5.1:73530434-73530453 | None:intergenic | 40.0% | |
| CTGCCTCATAAAATGACCAA+AGG | + | chr5.1:73531328-73531347 | None:intergenic | 40.0% | |
| GAATTTGGATTGCATGCAGT+TGG | + | chr5.1:73531558-73531577 | None:intergenic | 40.0% | |
| GACCACTCAATTCCTGTAAA+AGG | + | chr5.1:73532013-73532032 | None:intergenic | 40.0% | |
| GAGACAGTGCATGTTTGAAT+TGG | + | chr5.1:73530972-73530991 | None:intergenic | 40.0% | |
| GATACTGTATGGACCATATG+AGG | - | chr5.1:73532480-73532499 | MS.gene062332:CDS | 40.0% | |
| GATTACCATAGGCAGAAGAT+GGG | + | chr5.1:73530467-73530486 | None:intergenic | 40.0% | |
| GATTCTGCAACATCCATTCT+TGG | + | chr5.1:73532037-73532056 | None:intergenic | 40.0% | |
| GCTTAGGAGATGTGACAATA+AGG | - | chr5.1:73531275-73531294 | MS.gene062332:CDS | 40.0% | |
| GTTATCATGGTAGAAGTTCC+TGG | - | chr5.1:73532070-73532089 | MS.gene062332:intron | 40.0% | |
| TCTCATCAATGGAAGCAAAG+TGG | + | chr5.1:73530435-73530454 | None:intergenic | 40.0% | |
| TGTTGCTCCTAAAACCAATG+TGG | - | chr5.1:73531669-73531688 | MS.gene062332:CDS | 40.0% | |
| TTGCTTGGCCTAGAAAATGA+AGG | + | chr5.1:73531829-73531848 | None:intergenic | 40.0% | |
| TTTGGTCCCTGGTTTCTAAT+AGG | + | chr5.1:73531153-73531172 | None:intergenic | 40.0% | |
| ! | ACGATTGATTCTTTCCTTGC+AGG | + | chr5.1:73531742-73531761 | None:intergenic | 40.0% |
| ! | CTCCATACTCTTTTGATCTC+TGG | + | chr5.1:73531078-73531097 | None:intergenic | 40.0% |
| ! | TCCCTTTTACAGGAATTGAG+TGG | - | chr5.1:73532008-73532027 | MS.gene062332:intron | 40.0% |
| ! | TGCATGTTTGAAATCACGGT+GGG | - | chr5.1:73530866-73530885 | MS.gene062332:CDS | 40.0% |
| ! | TTGAGCCACCTTCATTTTCT+AGG | - | chr5.1:73531818-73531837 | MS.gene062332:intron | 40.0% |
| !! | GGTGGGTTTTGACAAAATCA+GGG | - | chr5.1:73530883-73530902 | MS.gene062332:CDS | 40.0% |
| !! | GTTTGAATTGGTGGTGTGTT+TGG | + | chr5.1:73530960-73530979 | None:intergenic | 40.0% |
| !! | TGTTCCCTGGTTTTCTGAAA+TGG | + | chr5.1:73531116-73531135 | None:intergenic | 40.0% |
| !!! | ATTGGTTTTAGGAGCAACAG+AGG | + | chr5.1:73531668-73531687 | None:intergenic | 40.0% |
| !!! | CCCCTTTTTTTCCCTTTTAC+AGG | - | chr5.1:73531998-73532017 | MS.gene062332:intron | 40.0% |
| !!! | TAACAATTGGTTTTGGTCCC+TGG | + | chr5.1:73531164-73531183 | None:intergenic | 40.0% |
| ACATTGTCCTTGTTCACACG+AGG | + | chr5.1:73532523-73532542 | None:intergenic | 45.0% | |
| ACTGCAATTCTGATAGGGAG+AGG | + | chr5.1:73531238-73531257 | None:intergenic | 45.0% | |
| AGTGGCCAAACAACCTCATA+TGG | + | chr5.1:73532496-73532515 | None:intergenic | 45.0% | |
| ATCTACCCATCTTCTGCCTA+TGG | - | chr5.1:73530459-73530478 | MS.gene062332:CDS | 45.0% | |
| CACAAGAGGGAGATACTGTA+TGG | - | chr5.1:73532469-73532488 | MS.gene062332:CDS | 45.0% | |
| CTTGCAGGTCTTGCAAAACA+TGG | + | chr5.1:73531727-73531746 | None:intergenic | 45.0% | |
| CTTGGCCTAGAAAATGAAGG+TGG | + | chr5.1:73531826-73531845 | None:intergenic | 45.0% | |
| GTAGTCTGAACTCTGTGCTT+AGG | - | chr5.1:73531259-73531278 | MS.gene062332:CDS | 45.0% | |
| TCATGGAGTCAGAACATCAG+TGG | + | chr5.1:73531524-73531543 | None:intergenic | 45.0% | |
| TCTCCCTATCAGAATTGCAG+TGG | - | chr5.1:73531237-73531256 | MS.gene062332:CDS | 45.0% | |
| ! | ACTAGTTCTTGGAGAGAAGC+AGG | - | chr5.1:73532418-73532437 | MS.gene062332:intron | 45.0% |
| ! | CATGTTTTGCAAGACCTGCA+AGG | - | chr5.1:73531725-73531744 | MS.gene062332:intron | 45.0% |
| ! | GTAGACGCTCTACTAGTTCT+TGG | - | chr5.1:73532407-73532426 | MS.gene062332:intron | 45.0% |
| ! | GTGCATGTTTGAAATCACGG+TGG | - | chr5.1:73530865-73530884 | MS.gene062332:CDS | 45.0% |
| ! | TCTTGTGTCGATGTTGTGTC+TGG | - | chr5.1:73532263-73532282 | MS.gene062332:intron | 45.0% |
| ! | TGTGTCTGGAGTTGGTCTAT+GGG | - | chr5.1:73532277-73532296 | MS.gene062332:intron | 45.0% |
| ! | TTGTGTCTGGAGTTGGTCTA+TGG | - | chr5.1:73532276-73532295 | MS.gene062332:intron | 45.0% |
| !! | AGTACGACGAATTTTCAGGG+TGG | - | chr5.1:73531634-73531653 | MS.gene062332:CDS | 45.0% |
| !! | CAGTGTTGGTGACATAAGAG+TGG | - | chr5.1:73532096-73532115 | MS.gene062332:intron | 45.0% |
| !! | CGGTGGGTTTTGACAAAATC+AGG | - | chr5.1:73530882-73530901 | MS.gene062332:CDS | 45.0% |
| !! | TGTTGGTGACATAAGAGTGG+AGG | - | chr5.1:73532099-73532118 | MS.gene062332:intron | 45.0% |
| !! | TAATAATATTCAATAAAATA+AGG | - | chr5.1:73530802-73530821 | MS.gene062332:intron | 5.0% |
| ACTTCCTCCTCGTGTGAACA+AGG | - | chr5.1:73532513-73532532 | MS.gene062332:CDS | 50.0% | |
| ATGTCACCAACACTGACACC+AGG | + | chr5.1:73532091-73532110 | None:intergenic | 50.0% | |
| CATGCAGTCAGGAGCAAGAT+CGG | - | chr5.1:73531445-73531464 | MS.gene062332:intron | 50.0% | |
| GACCAAAGGAAGCAGATGCT+TGG | + | chr5.1:73531314-73531333 | None:intergenic | 50.0% | |
| TGCAAGGCTTGTCTAGTGTC+TGG | - | chr5.1:73532174-73532193 | MS.gene062332:intron | 50.0% | |
| TTGTCCTTGTTCACACGAGG+AGG | + | chr5.1:73532520-73532539 | None:intergenic | 50.0% | |
| TTGTCTAGTGTCTGGCACGT+GGG | - | chr5.1:73532182-73532201 | MS.gene062332:intron | 50.0% | |
| TTGTTCACACGAGGAGGAAG+TGG | + | chr5.1:73532514-73532533 | None:intergenic | 50.0% | |
| ! | GAAGTTCCTGGTGTCAGTGT+TGG | - | chr5.1:73532082-73532101 | MS.gene062332:intron | 50.0% |
| ! | GTAATCGCATGTGTCGGTGT+CGG | + | chr5.1:73532213-73532232 | None:intergenic | 50.0% |
| ! | GTCGATGTTGTGTCTGGAGT+TGG | - | chr5.1:73532269-73532288 | MS.gene062332:intron | 50.0% |
| CAGTCAGGAGCAAGATCGGA+TGG | - | chr5.1:73531449-73531468 | MS.gene062332:intron | 55.0% | |
| CGCCAAGCATCTGCTTCCTT+TGG | - | chr5.1:73531309-73531328 | MS.gene062332:intron | 55.0% | |
| CTTGTCTAGTGTCTGGCACG+TGG | - | chr5.1:73532181-73532200 | MS.gene062332:intron | 55.0% | |
| GAGGCAGACATCAGCTGAAG+AGG | - | chr5.1:73531341-73531360 | MS.gene062332:intron | 55.0% | |
| TGTCTAGTGTCTGGCACGTG+GGG | - | chr5.1:73532183-73532202 | MS.gene062332:intron | 55.0% | |
| GTCTAGTGTCTGGCACGTGG+GGG | - | chr5.1:73532184-73532203 | MS.gene062332:intron | 60.0% | |
| TCTCGCGCAGTCATGCAGTC+AGG | - | chr5.1:73531434-73531453 | MS.gene062332:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 73530388 | 73532561 | 73530388 | ID=MS.gene062332 |
| chr5.1 | mRNA | 73530388 | 73532561 | 73530388 | ID=MS.gene062332.t1;Parent=MS.gene062332 |
| chr5.1 | exon | 73532469 | 73532561 | 73532469 | ID=MS.gene062332.t1.exon1;Parent=MS.gene062332.t1 |
| chr5.1 | CDS | 73532469 | 73532561 | 73532469 | ID=cds.MS.gene062332.t1;Parent=MS.gene062332.t1 |
| chr5.1 | exon | 73531587 | 73531700 | 73531587 | ID=MS.gene062332.t1.exon2;Parent=MS.gene062332.t1 |
| chr5.1 | CDS | 73531587 | 73531700 | 73531587 | ID=cds.MS.gene062332.t1;Parent=MS.gene062332.t1 |
| chr5.1 | exon | 73531042 | 73531297 | 73531042 | ID=MS.gene062332.t1.exon3;Parent=MS.gene062332.t1 |
| chr5.1 | CDS | 73531042 | 73531297 | 73531042 | ID=cds.MS.gene062332.t1;Parent=MS.gene062332.t1 |
| chr5.1 | exon | 73530815 | 73530929 | 73530815 | ID=MS.gene062332.t1.exon4;Parent=MS.gene062332.t1 |
| chr5.1 | CDS | 73530815 | 73530929 | 73530815 | ID=cds.MS.gene062332.t1;Parent=MS.gene062332.t1 |
| chr5.1 | exon | 73530388 | 73530556 | 73530388 | ID=MS.gene062332.t1.exon5;Parent=MS.gene062332.t1 |
| chr5.1 | CDS | 73530388 | 73530556 | 73530388 | ID=cds.MS.gene062332.t1;Parent=MS.gene062332.t1 |
| Gene Sequence |
| Protein sequence |
