Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074607.t1 | XP_013458671.1 | 98.7 | 223 | 3 | 0 | 1 | 223 | 314 | 536 | 3.50E-118 | 434.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074607.t1 | Q53RK8 | 92.4 | 224 | 17 | 0 | 1 | 224 | 343 | 566 | 6.9e-115 | 414.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074607.t1 | A0A072UUE3 | 98.7 | 223 | 3 | 0 | 1 | 223 | 314 | 536 | 2.5e-118 | 434.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene074607 | 0.82605 | 3.36E-54 | -1.69E-46 |
| MS.gene049159 | MS.gene074607 | 0.807373 | 5.22E-50 | -1.69E-46 |
| MS.gene04918 | MS.gene074607 | 0.818218 | 2.20E-52 | -1.69E-46 |
| MS.gene04919 | MS.gene074607 | 0.805273 | 1.45E-49 | -1.69E-46 |
| MS.gene04920 | MS.gene074607 | 0.834908 | 2.28E-56 | -1.69E-46 |
| MS.gene049254 | MS.gene074607 | 0.821626 | 3.65E-53 | -1.69E-46 |
| MS.gene049283 | MS.gene074607 | 0.865697 | 4.89E-65 | -1.69E-46 |
| MS.gene049368 | MS.gene074607 | 0.832203 | 1.08E-55 | -1.69E-46 |
| MS.gene049452 | MS.gene074607 | 0.831149 | 1.97E-55 | -1.69E-46 |
| MS.gene049499 | MS.gene074607 | 0.864134 | 1.51E-64 | -1.69E-46 |
| MS.gene049801 | MS.gene074607 | 0.800845 | 1.19E-48 | -1.69E-46 |
| MS.gene049983 | MS.gene074607 | 0.854774 | 9.84E-62 | -1.69E-46 |
| MS.gene050084 | MS.gene074607 | 0.80062 | 1.32E-48 | -1.69E-46 |
| MS.gene050085 | MS.gene074607 | 0.81484 | 1.26E-51 | -1.69E-46 |
| MS.gene050414 | MS.gene074607 | 0.823195 | 1.58E-53 | -1.69E-46 |
| MS.gene050646 | MS.gene074607 | 0.824699 | 7.01E-54 | -1.69E-46 |
| MS.gene050654 | MS.gene074607 | 0.832692 | 8.17E-56 | -1.69E-46 |
| MS.gene050941 | MS.gene074607 | 0.801653 | 8.13E-49 | -1.69E-46 |
| MS.gene050945 | MS.gene074607 | 0.812518 | 4.07E-51 | -1.69E-46 |
| MS.gene051066 | MS.gene074607 | 0.805299 | 1.43E-49 | -1.69E-46 |
| MS.gene051181 | MS.gene074607 | 0.800751 | 1.24E-48 | -1.69E-46 |
| MS.gene051198 | MS.gene074607 | 0.833546 | 5.01E-56 | -1.69E-46 |
| MS.gene051279 | MS.gene074607 | 0.810426 | 1.16E-50 | -1.69E-46 |
| MS.gene051343 | MS.gene074607 | 0.821768 | 3.39E-53 | -1.69E-46 |
| MS.gene051363 | MS.gene074607 | 0.817546 | 3.12E-52 | -1.69E-46 |
| MS.gene051368 | MS.gene074607 | 0.810729 | 9.98E-51 | -1.69E-46 |
| MS.gene051597 | MS.gene074607 | 0.836936 | 6.99E-57 | -1.69E-46 |
| MS.gene051628 | MS.gene074607 | 0.803204 | 3.90E-49 | -1.69E-46 |
| MS.gene052037 | MS.gene074607 | 0.813572 | 2.39E-51 | -1.69E-46 |
| MS.gene052072 | MS.gene074607 | 0.802565 | 5.28E-49 | -1.69E-46 |
| MS.gene052342 | MS.gene074607 | 0.805477 | 1.31E-49 | -1.69E-46 |
| MS.gene052463 | MS.gene074607 | 0.816355 | 5.77E-52 | -1.69E-46 |
| MS.gene052516 | MS.gene074607 | 0.800352 | 1.50E-48 | -1.69E-46 |
| MS.gene052518 | MS.gene074607 | 0.819323 | 1.23E-52 | -1.69E-46 |
| MS.gene052519 | MS.gene074607 | 0.818703 | 1.71E-52 | -1.69E-46 |
| MS.gene052534 | MS.gene074607 | 0.806307 | 8.77E-50 | -1.69E-46 |
| MS.gene052582 | MS.gene074607 | 0.815012 | 1.15E-51 | -1.69E-46 |
| MS.gene052584 | MS.gene074607 | 0.820198 | 7.78E-53 | -1.69E-46 |
| MS.gene052855 | MS.gene074607 | 0.80288 | 4.55E-49 | -1.69E-46 |
| MS.gene052954 | MS.gene074607 | 0.818219 | 2.20E-52 | -1.69E-46 |
| MS.gene053079 | MS.gene074607 | 0.828321 | 9.59E-55 | -1.69E-46 |
| MS.gene05308 | MS.gene074607 | 0.822567 | 2.21E-53 | -1.69E-46 |
| MS.gene053226 | MS.gene074607 | 0.81784 | 2.68E-52 | -1.69E-46 |
| MS.gene053272 | MS.gene074607 | -0.814008 | 1.92E-51 | -1.69E-46 |
| MS.gene053542 | MS.gene074607 | 0.800862 | 1.18E-48 | -1.69E-46 |
| MS.gene05364 | MS.gene074607 | 0.820807 | 5.64E-53 | -1.69E-46 |
| MS.gene053931 | MS.gene074607 | 0.821322 | 4.29E-53 | -1.69E-46 |
| MS.gene054142 | MS.gene074607 | 0.803798 | 2.94E-49 | -1.69E-46 |
| MS.gene05415 | MS.gene074607 | 0.800757 | 1.24E-48 | -1.69E-46 |
| MS.gene054479 | MS.gene074607 | 0.833184 | 6.17E-56 | -1.69E-46 |
| MS.gene054576 | MS.gene074607 | 0.806071 | 9.83E-50 | -1.69E-46 |
| MS.gene05458 | MS.gene074607 | 0.809132 | 2.20E-50 | -1.69E-46 |
| MS.gene054651 | MS.gene074607 | 0.833355 | 5.59E-56 | -1.69E-46 |
| MS.gene054657 | MS.gene074607 | 0.809356 | 1.97E-50 | -1.69E-46 |
| MS.gene054893 | MS.gene074607 | 0.806783 | 6.96E-50 | -1.69E-46 |
| MS.gene054957 | MS.gene074607 | 0.814425 | 1.55E-51 | -1.69E-46 |
| MS.gene05517 | MS.gene074607 | 0.806428 | 8.26E-50 | -1.69E-46 |
| MS.gene055228 | MS.gene074607 | 0.806257 | 8.98E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene074607 | 0.804915 | 1.72E-49 | -1.69E-46 |
| MS.gene055841 | MS.gene074607 | 0.833809 | 4.31E-56 | -1.69E-46 |
| MS.gene055926 | MS.gene074607 | 0.800788 | 1.22E-48 | -1.69E-46 |
| MS.gene056045 | MS.gene074607 | 0.831472 | 1.64E-55 | -1.69E-46 |
| MS.gene056174 | MS.gene074607 | 0.808322 | 3.28E-50 | -1.69E-46 |
| MS.gene056252 | MS.gene074607 | 0.800978 | 1.12E-48 | -1.69E-46 |
| MS.gene056308 | MS.gene074607 | 0.806098 | 9.70E-50 | -1.69E-46 |
| MS.gene056363 | MS.gene074607 | 0.80988 | 1.52E-50 | -1.69E-46 |
| MS.gene056776 | MS.gene074607 | 0.825218 | 5.28E-54 | -1.69E-46 |
| MS.gene056831 | MS.gene074607 | 0.818914 | 1.53E-52 | -1.69E-46 |
| MS.gene05686 | MS.gene074607 | 0.828424 | 9.06E-55 | -1.69E-46 |
| MS.gene05690 | MS.gene074607 | 0.815085 | 1.11E-51 | -1.69E-46 |
| MS.gene056973 | MS.gene074607 | 0.821019 | 5.04E-53 | -1.69E-46 |
| MS.gene057102 | MS.gene074607 | 0.801522 | 8.65E-49 | -1.69E-46 |
| MS.gene057208 | MS.gene074607 | 0.878112 | 3.66E-69 | -1.69E-46 |
| MS.gene057371 | MS.gene074607 | 0.808746 | 2.66E-50 | -1.69E-46 |
| MS.gene057598 | MS.gene074607 | 0.817973 | 2.50E-52 | -1.69E-46 |
| MS.gene057890 | MS.gene074607 | -0.808134 | 3.59E-50 | -1.69E-46 |
| MS.gene057893 | MS.gene074607 | -0.809915 | 1.49E-50 | -1.69E-46 |
| MS.gene058008 | MS.gene074607 | 0.832897 | 7.27E-56 | -1.69E-46 |
| MS.gene058009 | MS.gene074607 | 0.83326 | 5.90E-56 | -1.69E-46 |
| MS.gene058010 | MS.gene074607 | 0.831182 | 1.93E-55 | -1.69E-46 |
| MS.gene058159 | MS.gene074607 | 0.8232 | 1.57E-53 | -1.69E-46 |
| MS.gene058223 | MS.gene074607 | -0.803148 | 4.00E-49 | -1.69E-46 |
| MS.gene058292 | MS.gene074607 | 0.811399 | 7.14E-51 | -1.69E-46 |
| MS.gene058548 | MS.gene074607 | 0.811872 | 5.63E-51 | -1.69E-46 |
| MS.gene058595 | MS.gene074607 | 0.80739 | 5.17E-50 | -1.69E-46 |
| MS.gene058781 | MS.gene074607 | 0.87798 | 4.06E-69 | -1.69E-46 |
| MS.gene058783 | MS.gene074607 | 0.867272 | 1.55E-65 | -1.69E-46 |
| MS.gene058979 | MS.gene074607 | 0.831641 | 1.49E-55 | -1.69E-46 |
| MS.gene059146 | MS.gene074607 | 0.823088 | 1.67E-53 | -1.69E-46 |
| MS.gene059170 | MS.gene074607 | 0.803154 | 3.99E-49 | -1.69E-46 |
| MS.gene05952 | MS.gene074607 | 0.824838 | 6.50E-54 | -1.69E-46 |
| MS.gene059842 | MS.gene074607 | 0.805415 | 1.35E-49 | -1.69E-46 |
| MS.gene05985 | MS.gene074607 | -0.804623 | 1.98E-49 | -1.69E-46 |
| MS.gene060011 | MS.gene074607 | 0.81542 | 9.33E-52 | -1.69E-46 |
| MS.gene060244 | MS.gene074607 | 0.821368 | 4.19E-53 | -1.69E-46 |
| MS.gene060259 | MS.gene074607 | 0.801068 | 1.07E-48 | -1.69E-46 |
| MS.gene060310 | MS.gene074607 | 0.800904 | 1.16E-48 | -1.69E-46 |
| MS.gene060365 | MS.gene074607 | 0.833806 | 4.32E-56 | -1.69E-46 |
| MS.gene060527 | MS.gene074607 | 0.817291 | 3.56E-52 | -1.69E-46 |
| MS.gene06052 | MS.gene074607 | 0.812836 | 3.47E-51 | -1.69E-46 |
| MS.gene060777 | MS.gene074607 | 0.819512 | 1.12E-52 | -1.69E-46 |
| MS.gene060932 | MS.gene074607 | 0.817449 | 3.28E-52 | -1.69E-46 |
| MS.gene060933 | MS.gene074607 | 0.848165 | 7.29E-60 | -1.69E-46 |
| MS.gene060935 | MS.gene074607 | 0.877708 | 5.06E-69 | -1.69E-46 |
| MS.gene060937 | MS.gene074607 | 0.880265 | 6.33E-70 | -1.69E-46 |
| MS.gene061100 | MS.gene074607 | 0.834399 | 3.07E-56 | -1.69E-46 |
| MS.gene061160 | MS.gene074607 | 0.827993 | 1.15E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074607.t1 | MTR_4g134170 | 87.795 | 254 | 31 | 0 | 1 | 254 | 314 | 567 | 7.35e-159 | 458 |
| MS.gene074607.t1 | MTR_6g005320 | 87.008 | 254 | 33 | 0 | 1 | 254 | 276 | 529 | 3.16e-158 | 455 |
| MS.gene074607.t1 | MTR_3g467550 | 41.250 | 240 | 120 | 3 | 3 | 241 | 146 | 365 | 2.26e-56 | 187 |
| MS.gene074607.t1 | MTR_3g467550 | 42.083 | 240 | 118 | 4 | 3 | 241 | 115 | 334 | 1.24e-55 | 187 |
| MS.gene074607.t1 | MTR_3g467550 | 42.083 | 240 | 118 | 4 | 3 | 241 | 146 | 365 | 1.67e-55 | 187 |
| MS.gene074607.t1 | MTR_7g109720 | 48.357 | 213 | 90 | 3 | 3 | 215 | 261 | 453 | 1.28e-54 | 188 |
| MS.gene074607.t1 | MTR_4g105100 | 43.636 | 220 | 103 | 4 | 5 | 223 | 233 | 432 | 4.88e-48 | 166 |
| MS.gene074607.t1 | MTR_2g007000 | 43.519 | 216 | 99 | 4 | 3 | 215 | 533 | 728 | 1.11e-47 | 169 |
| MS.gene074607.t1 | MTR_2g100230 | 42.727 | 220 | 105 | 4 | 5 | 223 | 127 | 326 | 1.86e-47 | 164 |
| MS.gene074607.t1 | MTR_4g105100 | 43.636 | 220 | 103 | 4 | 5 | 223 | 233 | 432 | 2.24e-47 | 166 |
| MS.gene074607.t1 | MTR_3g083690 | 38.281 | 256 | 134 | 5 | 3 | 253 | 174 | 410 | 1.08e-46 | 164 |
| MS.gene074607.t1 | MTR_1g054630 | 41.284 | 218 | 107 | 4 | 3 | 215 | 183 | 384 | 2.49e-45 | 160 |
| MS.gene074607.t1 | MTR_6g005550 | 41.204 | 216 | 104 | 3 | 5 | 218 | 196 | 390 | 9.12e-45 | 160 |
| MS.gene074607.t1 | MTR_4g114120 | 36.145 | 249 | 138 | 4 | 3 | 243 | 169 | 404 | 7.53e-44 | 157 |
| MS.gene074607.t1 | MTR_2g032630 | 37.104 | 221 | 116 | 3 | 5 | 223 | 527 | 726 | 3.02e-39 | 145 |
| MS.gene074607.t1 | MTR_1g095810 | 34.118 | 255 | 135 | 3 | 3 | 251 | 174 | 401 | 4.22e-38 | 140 |
| MS.gene074607.t1 | MTR_3g449250 | 40.206 | 194 | 95 | 3 | 8 | 201 | 124 | 296 | 4.33e-38 | 140 |
| MS.gene074607.t1 | MTR_3g449250 | 40.206 | 194 | 95 | 3 | 8 | 201 | 124 | 296 | 6.68e-38 | 140 |
| MS.gene074607.t1 | MTR_1g026830 | 33.977 | 259 | 130 | 5 | 3 | 251 | 176 | 403 | 1.25e-36 | 136 |
| MS.gene074607.t1 | MTR_5g027840 | 35.156 | 256 | 141 | 5 | 3 | 256 | 131 | 363 | 1.30e-36 | 135 |
| MS.gene074607.t1 | MTR_6g082080 | 33.704 | 270 | 138 | 6 | 3 | 261 | 39 | 278 | 4.28e-36 | 133 |
| MS.gene074607.t1 | MTR_7g056830 | 33.333 | 270 | 139 | 6 | 3 | 261 | 39 | 278 | 1.83e-35 | 131 |
| MS.gene074607.t1 | MTR_5g090120 | 35.849 | 212 | 113 | 4 | 8 | 217 | 115 | 305 | 3.99e-35 | 132 |
| MS.gene074607.t1 | MTR_3g049990 | 33.036 | 224 | 127 | 3 | 2 | 224 | 180 | 381 | 1.21e-30 | 120 |
| MS.gene074607.t1 | MTR_6g033070 | 30.667 | 225 | 133 | 4 | 1 | 223 | 167 | 370 | 6.82e-30 | 117 |
| MS.gene074607.t1 | MTR_4g079320 | 37.186 | 199 | 101 | 4 | 4 | 201 | 49 | 224 | 5.40e-29 | 115 |
| MS.gene074607.t1 | MTR_6g056080 | 32.129 | 249 | 141 | 6 | 8 | 251 | 137 | 362 | 5.99e-28 | 112 |
| MS.gene074607.t1 | MTR_2g039960 | 31.418 | 261 | 138 | 6 | 5 | 252 | 63 | 295 | 9.61e-28 | 110 |
| MS.gene074607.t1 | MTR_0915s0010 | 29.146 | 199 | 116 | 2 | 3 | 201 | 18 | 191 | 1.08e-27 | 107 |
| MS.gene074607.t1 | MTR_2g041140 | 32.895 | 228 | 123 | 5 | 2 | 224 | 169 | 371 | 2.03e-27 | 111 |
| MS.gene074607.t1 | MTR_8g027780 | 34.328 | 201 | 104 | 7 | 2 | 194 | 134 | 314 | 2.60e-27 | 109 |
| MS.gene074607.t1 | MTR_4g125970 | 31.298 | 262 | 137 | 6 | 5 | 252 | 63 | 295 | 3.10e-27 | 108 |
| MS.gene074607.t1 | MTR_4g125970 | 31.298 | 262 | 137 | 6 | 5 | 252 | 80 | 312 | 4.13e-27 | 108 |
| MS.gene074607.t1 | MTR_7g057250 | 34.211 | 228 | 123 | 7 | 2 | 202 | 191 | 418 | 5.88e-27 | 109 |
| MS.gene074607.t1 | MTR_8g027780 | 34.328 | 201 | 104 | 7 | 2 | 194 | 134 | 314 | 8.68e-27 | 108 |
| MS.gene074607.t1 | MTR_7g076800 | 29.146 | 199 | 116 | 2 | 3 | 201 | 170 | 343 | 1.76e-26 | 107 |
| MS.gene074607.t1 | MTR_3g071620 | 35.377 | 212 | 112 | 6 | 2 | 209 | 44 | 234 | 1.84e-26 | 108 |
| MS.gene074607.t1 | MTR_7g076820 | 28.643 | 199 | 117 | 2 | 3 | 201 | 179 | 352 | 1.91e-26 | 107 |
| MS.gene074607.t1 | MTR_7g076830 | 29.146 | 199 | 116 | 2 | 3 | 201 | 172 | 345 | 1.92e-26 | 107 |
| MS.gene074607.t1 | MTR_2g099620 | 31.274 | 259 | 141 | 7 | 5 | 252 | 47 | 279 | 2.29e-26 | 106 |
| MS.gene074607.t1 | MTR_2g099620 | 31.274 | 259 | 141 | 7 | 5 | 252 | 63 | 295 | 2.90e-26 | 106 |
| MS.gene074607.t1 | MTR_8g027775 | 33.500 | 200 | 107 | 5 | 2 | 194 | 130 | 310 | 3.33e-26 | 107 |
| MS.gene074607.t1 | MTR_4g059460 | 31.863 | 204 | 130 | 5 | 3 | 201 | 74 | 273 | 1.07e-25 | 105 |
| MS.gene074607.t1 | MTR_8g018400 | 30.502 | 259 | 143 | 6 | 5 | 252 | 63 | 295 | 1.31e-25 | 104 |
| MS.gene074607.t1 | MTR_8g027770 | 33.500 | 200 | 107 | 5 | 2 | 194 | 229 | 409 | 2.79e-25 | 104 |
| MS.gene074607.t1 | MTR_8g097000 | 30.986 | 213 | 113 | 6 | 2 | 202 | 316 | 506 | 6.63e-25 | 103 |
| MS.gene074607.t1 | MTR_2g043360 | 31.068 | 206 | 129 | 5 | 3 | 201 | 71 | 270 | 1.49e-24 | 102 |
| MS.gene074607.t1 | MTR_4g112340 | 30.986 | 213 | 112 | 7 | 3 | 206 | 126 | 312 | 2.60e-24 | 102 |
| MS.gene074607.t1 | MTR_1g102410 | 34.951 | 206 | 99 | 5 | 8 | 194 | 78 | 267 | 1.45e-23 | 99.8 |
| MS.gene074607.t1 | MTR_4g459350 | 31.522 | 184 | 117 | 5 | 3 | 181 | 71 | 250 | 3.48e-23 | 95.9 |
| MS.gene074607.t1 | MTR_5g092560 | 32.683 | 205 | 108 | 6 | 2 | 201 | 104 | 283 | 2.01e-22 | 96.7 |
| MS.gene074607.t1 | MTR_7g100820 | 31.628 | 215 | 122 | 6 | 3 | 217 | 163 | 352 | 2.87e-22 | 96.3 |
| MS.gene074607.t1 | MTR_2g066050 | 28.899 | 218 | 127 | 3 | 4 | 218 | 83 | 275 | 3.88e-22 | 95.5 |
| MS.gene074607.t1 | MTR_4g068990 | 29.344 | 259 | 140 | 10 | 2 | 252 | 104 | 327 | 1.28e-21 | 94.4 |
| MS.gene074607.t1 | MTR_8g032230 | 37.209 | 129 | 73 | 2 | 1 | 128 | 37 | 158 | 3.34e-21 | 87.8 |
| MS.gene074607.t1 | MTR_2g438110 | 27.835 | 194 | 115 | 3 | 8 | 201 | 68 | 236 | 1.08e-20 | 90.9 |
| MS.gene074607.t1 | MTR_2g055850 | 32.000 | 200 | 109 | 5 | 3 | 198 | 120 | 296 | 1.53e-20 | 90.9 |
| MS.gene074607.t1 | MTR_2g063080 | 33.493 | 209 | 123 | 5 | 2 | 199 | 137 | 340 | 4.90e-20 | 89.4 |
| MS.gene074607.t1 | MTR_4g077370 | 30.570 | 193 | 106 | 3 | 3 | 192 | 279 | 446 | 1.66e-19 | 87.8 |
| MS.gene074607.t1 | MTR_4g077370 | 34.395 | 157 | 73 | 6 | 3 | 154 | 31 | 162 | 6.68e-15 | 74.3 |
| MS.gene074607.t1 | MTR_6g039840 | 29.534 | 193 | 114 | 3 | 3 | 188 | 139 | 316 | 3.14e-19 | 87.4 |
| MS.gene074607.t1 | MTR_3g107420 | 27.966 | 236 | 141 | 6 | 3 | 234 | 76 | 286 | 3.31e-18 | 84.0 |
| MS.gene074607.t1 | MTR_1g012420 | 26.695 | 236 | 144 | 6 | 3 | 234 | 76 | 286 | 3.82e-17 | 80.9 |
| MS.gene074607.t1 | MTR_4g010565 | 27.660 | 235 | 141 | 6 | 4 | 234 | 154 | 363 | 5.87e-17 | 80.5 |
| MS.gene074607.t1 | MTR_1g083130 | 28.638 | 213 | 126 | 5 | 3 | 209 | 55 | 247 | 1.19e-15 | 76.6 |
| MS.gene074607.t1 | MTR_3g107420 | 29.353 | 201 | 104 | 5 | 3 | 195 | 76 | 246 | 2.53e-15 | 74.7 |
| MS.gene074607.t1 | MTR_1g022305 | 28.500 | 200 | 97 | 5 | 4 | 199 | 34 | 191 | 2.52e-14 | 72.4 |
| MS.gene074607.t1 | MTR_6g039840 | 30.935 | 139 | 87 | 1 | 50 | 188 | 11 | 140 | 4.92e-14 | 71.6 |
| MS.gene074607.t1 | MTR_2g043360 | 28.378 | 148 | 102 | 3 | 56 | 201 | 7 | 152 | 8.08e-14 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074607.t1 | AT2G33730 | 89.778 | 225 | 23 | 0 | 1 | 225 | 341 | 565 | 7.59e-138 | 405 |
| MS.gene074607.t1 | AT1G28180 | 69.196 | 224 | 49 | 2 | 1 | 224 | 1 | 204 | 1.60e-106 | 313 |
| MS.gene074607.t1 | AT1G28180 | 76.068 | 117 | 28 | 0 | 1 | 117 | 1 | 117 | 9.00e-63 | 193 |
| MS.gene074607.t1 | AT2G47330 | 47.418 | 213 | 92 | 3 | 3 | 215 | 258 | 450 | 3.94e-54 | 186 |
| MS.gene074607.t1 | AT3G58510 | 38.889 | 252 | 135 | 4 | 3 | 252 | 181 | 415 | 4.19e-50 | 174 |
| MS.gene074607.t1 | AT3G58510 | 38.889 | 252 | 135 | 4 | 3 | 252 | 181 | 415 | 4.19e-50 | 174 |
| MS.gene074607.t1 | AT3G58510 | 38.889 | 252 | 135 | 4 | 3 | 252 | 181 | 415 | 4.19e-50 | 174 |
| MS.gene074607.t1 | AT5G63120 | 44.286 | 210 | 96 | 4 | 5 | 213 | 197 | 386 | 1.98e-48 | 167 |
| MS.gene074607.t1 | AT5G63120 | 44.286 | 210 | 96 | 4 | 5 | 213 | 197 | 386 | 1.99e-48 | 167 |
| MS.gene074607.t1 | AT5G63120 | 44.286 | 210 | 96 | 4 | 5 | 213 | 197 | 386 | 1.99e-48 | 167 |
| MS.gene074607.t1 | AT5G63120 | 44.286 | 210 | 96 | 4 | 5 | 213 | 197 | 386 | 1.99e-48 | 167 |
| MS.gene074607.t1 | AT5G63120 | 44.286 | 210 | 96 | 4 | 5 | 213 | 197 | 386 | 7.54e-48 | 167 |
| MS.gene074607.t1 | AT2G42520 | 41.704 | 223 | 115 | 3 | 3 | 223 | 189 | 398 | 5.86e-47 | 165 |
| MS.gene074607.t1 | AT2G42520 | 41.704 | 223 | 115 | 3 | 3 | 223 | 189 | 398 | 5.86e-47 | 165 |
| MS.gene074607.t1 | AT2G42520 | 41.704 | 223 | 115 | 3 | 3 | 223 | 189 | 398 | 5.86e-47 | 165 |
| MS.gene074607.t1 | AT1G20920 | 43.056 | 216 | 100 | 4 | 3 | 215 | 221 | 416 | 7.56e-47 | 167 |
| MS.gene074607.t1 | AT1G20920 | 44.335 | 203 | 90 | 4 | 3 | 202 | 559 | 741 | 7.85e-47 | 167 |
| MS.gene074607.t1 | AT1G20920 | 44.335 | 203 | 90 | 4 | 3 | 202 | 559 | 741 | 7.85e-47 | 167 |
| MS.gene074607.t1 | AT1G20920 | 44.335 | 203 | 90 | 4 | 3 | 202 | 559 | 741 | 7.85e-47 | 167 |
| MS.gene074607.t1 | AT1G20920 | 44.335 | 203 | 90 | 4 | 3 | 202 | 559 | 741 | 7.85e-47 | 167 |
| MS.gene074607.t1 | AT1G20920 | 44.335 | 203 | 90 | 4 | 3 | 202 | 559 | 741 | 7.85e-47 | 167 |
| MS.gene074607.t1 | AT1G20920 | 44.335 | 203 | 90 | 4 | 3 | 202 | 559 | 741 | 7.85e-47 | 167 |
| MS.gene074607.t1 | AT3G58570 | 39.130 | 253 | 135 | 4 | 3 | 253 | 176 | 411 | 1.38e-46 | 164 |
| MS.gene074607.t1 | AT3G09620 | 41.048 | 229 | 102 | 6 | 3 | 228 | 426 | 624 | 4.58e-46 | 165 |
| MS.gene074607.t1 | AT3G09620 | 41.048 | 229 | 102 | 6 | 3 | 228 | 427 | 625 | 4.72e-46 | 165 |
| MS.gene074607.t1 | AT1G55150 | 41.364 | 220 | 108 | 4 | 5 | 223 | 131 | 330 | 1.35e-45 | 160 |
| MS.gene074607.t1 | AT1G55150 | 41.364 | 220 | 108 | 4 | 5 | 223 | 156 | 355 | 2.50e-45 | 159 |
| MS.gene074607.t1 | AT3G01540 | 37.557 | 221 | 115 | 3 | 5 | 223 | 190 | 389 | 4.18e-41 | 149 |
| MS.gene074607.t1 | AT3G01540 | 37.557 | 221 | 115 | 3 | 5 | 223 | 190 | 389 | 4.43e-41 | 149 |
| MS.gene074607.t1 | AT3G01540 | 37.557 | 221 | 115 | 3 | 5 | 223 | 190 | 389 | 4.43e-41 | 149 |
| MS.gene074607.t1 | AT3G01540 | 37.557 | 221 | 115 | 3 | 5 | 223 | 190 | 389 | 4.43e-41 | 149 |
| MS.gene074607.t1 | AT5G14610 | 36.652 | 221 | 117 | 3 | 5 | 223 | 201 | 400 | 2.32e-40 | 145 |
| MS.gene074607.t1 | AT5G14610 | 36.652 | 221 | 117 | 3 | 5 | 223 | 62 | 261 | 3.64e-40 | 145 |
| MS.gene074607.t1 | AT5G14610 | 36.652 | 221 | 117 | 3 | 5 | 223 | 62 | 261 | 3.64e-40 | 145 |
| MS.gene074607.t1 | AT5G14610 | 36.652 | 221 | 117 | 3 | 5 | 223 | 193 | 392 | 1.91e-39 | 145 |
| MS.gene074607.t1 | AT5G14610 | 36.652 | 221 | 117 | 3 | 5 | 223 | 193 | 392 | 2.06e-39 | 145 |
| MS.gene074607.t1 | AT5G14610 | 36.652 | 221 | 117 | 3 | 5 | 223 | 201 | 400 | 2.53e-39 | 144 |
| MS.gene074607.t1 | AT5G14610 | 36.652 | 221 | 117 | 3 | 5 | 223 | 261 | 460 | 3.06e-39 | 145 |
| MS.gene074607.t1 | AT3G06480 | 36.199 | 221 | 118 | 3 | 5 | 223 | 467 | 666 | 1.02e-37 | 140 |
| MS.gene074607.t1 | AT3G06480 | 36.199 | 221 | 118 | 3 | 5 | 223 | 467 | 666 | 2.27e-37 | 140 |
| MS.gene074607.t1 | AT5G51280 | 35.897 | 234 | 127 | 2 | 3 | 230 | 176 | 392 | 2.84e-37 | 138 |
| MS.gene074607.t1 | AT4G33370 | 35.897 | 234 | 127 | 2 | 3 | 230 | 127 | 343 | 5.21e-37 | 137 |
| MS.gene074607.t1 | AT1G31970 | 39.535 | 215 | 107 | 5 | 5 | 217 | 146 | 339 | 6.55e-35 | 131 |
| MS.gene074607.t1 | AT5G26742 | 38.776 | 196 | 99 | 3 | 8 | 201 | 44 | 220 | 3.38e-34 | 130 |
| MS.gene074607.t1 | AT5G26742 | 38.776 | 196 | 99 | 3 | 8 | 201 | 137 | 313 | 6.69e-34 | 130 |
| MS.gene074607.t1 | AT5G26742 | 38.776 | 196 | 99 | 3 | 8 | 201 | 137 | 313 | 6.70e-34 | 130 |
| MS.gene074607.t1 | AT3G02065 | 32.870 | 216 | 127 | 2 | 1 | 216 | 1 | 198 | 3.19e-33 | 124 |
| MS.gene074607.t1 | AT3G02065 | 32.407 | 216 | 128 | 1 | 1 | 216 | 138 | 335 | 2.33e-32 | 124 |
| MS.gene074607.t1 | AT3G02065 | 32.407 | 216 | 128 | 1 | 1 | 216 | 138 | 335 | 2.33e-32 | 124 |
| MS.gene074607.t1 | AT5G60990 | 31.489 | 235 | 134 | 4 | 3 | 232 | 39 | 251 | 2.54e-32 | 123 |
| MS.gene074607.t1 | AT3G22310 | 34.536 | 194 | 106 | 3 | 8 | 201 | 151 | 323 | 3.23e-31 | 121 |
| MS.gene074607.t1 | AT3G22310 | 34.536 | 194 | 106 | 3 | 8 | 201 | 151 | 323 | 3.44e-31 | 121 |
| MS.gene074607.t1 | AT3G22330 | 36.082 | 194 | 103 | 4 | 8 | 201 | 139 | 311 | 5.96e-31 | 121 |
| MS.gene074607.t1 | AT1G77030 | 32.400 | 250 | 138 | 5 | 4 | 252 | 59 | 278 | 7.49e-31 | 121 |
| MS.gene074607.t1 | AT4G00660 | 28.631 | 241 | 142 | 4 | 3 | 243 | 161 | 371 | 9.39e-29 | 114 |
| MS.gene074607.t1 | AT4G00660 | 28.631 | 241 | 142 | 4 | 3 | 243 | 161 | 371 | 9.39e-29 | 114 |
| MS.gene074607.t1 | AT5G63630 | 35.500 | 200 | 103 | 6 | 2 | 194 | 83 | 263 | 1.72e-27 | 110 |
| MS.gene074607.t1 | AT2G45810 | 27.686 | 242 | 143 | 6 | 3 | 243 | 184 | 394 | 2.52e-27 | 110 |
| MS.gene074607.t1 | AT4G16630 | 33.632 | 223 | 125 | 3 | 2 | 223 | 196 | 396 | 3.77e-27 | 110 |
| MS.gene074607.t1 | AT3G13920 | 31.008 | 258 | 143 | 6 | 5 | 252 | 52 | 284 | 4.13e-27 | 108 |
| MS.gene074607.t1 | AT3G13920 | 31.008 | 258 | 143 | 6 | 5 | 252 | 57 | 289 | 4.88e-27 | 108 |
| MS.gene074607.t1 | AT3G13920 | 31.008 | 258 | 143 | 6 | 5 | 252 | 62 | 294 | 5.59e-27 | 108 |
| MS.gene074607.t1 | AT5G63630 | 35.500 | 200 | 103 | 6 | 2 | 194 | 277 | 457 | 5.90e-27 | 109 |
| MS.gene074607.t1 | AT3G13920 | 31.008 | 258 | 143 | 6 | 5 | 252 | 62 | 294 | 6.65e-27 | 108 |
| MS.gene074607.t1 | AT3G13920 | 31.008 | 258 | 143 | 6 | 5 | 252 | 66 | 298 | 6.87e-27 | 108 |
| MS.gene074607.t1 | AT1G72730 | 30.233 | 258 | 145 | 4 | 5 | 252 | 64 | 296 | 7.66e-27 | 107 |
| MS.gene074607.t1 | AT3G16840 | 37.245 | 196 | 99 | 6 | 9 | 181 | 228 | 422 | 8.06e-27 | 109 |
| MS.gene074607.t1 | AT3G16840 | 37.245 | 196 | 99 | 6 | 9 | 181 | 227 | 421 | 9.12e-27 | 109 |
| MS.gene074607.t1 | AT5G05450 | 35.211 | 213 | 108 | 7 | 2 | 207 | 45 | 234 | 1.84e-26 | 108 |
| MS.gene074607.t1 | AT5G62190 | 30.400 | 250 | 144 | 5 | 8 | 251 | 131 | 356 | 4.87e-26 | 107 |
| MS.gene074607.t1 | AT5G08610 | 33.000 | 200 | 108 | 5 | 2 | 194 | 411 | 591 | 5.01e-26 | 107 |
| MS.gene074607.t1 | AT3G61240 | 26.446 | 242 | 146 | 5 | 3 | 243 | 154 | 364 | 5.11e-26 | 106 |
| MS.gene074607.t1 | AT3G61240 | 26.446 | 242 | 146 | 5 | 3 | 243 | 154 | 364 | 5.11e-26 | 106 |
| MS.gene074607.t1 | AT1G54270 | 31.418 | 261 | 138 | 6 | 5 | 252 | 57 | 289 | 7.41e-26 | 105 |
| MS.gene074607.t1 | AT1G54270 | 31.418 | 261 | 138 | 6 | 5 | 252 | 62 | 294 | 8.89e-26 | 105 |
| MS.gene074607.t1 | AT5G08620 | 32.500 | 200 | 109 | 5 | 2 | 194 | 109 | 289 | 1.84e-25 | 105 |
| MS.gene074607.t1 | AT1G16280 | 31.797 | 217 | 120 | 3 | 4 | 217 | 89 | 280 | 2.55e-25 | 104 |
| MS.gene074607.t1 | AT2G40700 | 29.851 | 201 | 136 | 4 | 3 | 201 | 61 | 258 | 6.03e-25 | 103 |
| MS.gene074607.t1 | AT5G65900 | 32.195 | 205 | 117 | 4 | 3 | 206 | 184 | 367 | 9.76e-25 | 103 |
| MS.gene074607.t1 | AT3G18600 | 34.000 | 200 | 105 | 5 | 5 | 201 | 122 | 297 | 1.08e-24 | 103 |
| MS.gene074607.t1 | AT1G71370 | 33.810 | 210 | 111 | 6 | 4 | 207 | 47 | 234 | 1.49e-24 | 102 |
| MS.gene074607.t1 | AT1G71280 | 31.034 | 232 | 117 | 9 | 4 | 227 | 48 | 244 | 1.94e-21 | 93.2 |
| MS.gene074607.t1 | AT1G71280 | 31.466 | 232 | 116 | 10 | 4 | 227 | 48 | 244 | 2.87e-21 | 91.7 |
| MS.gene074607.t1 | AT5G54910 | 28.740 | 254 | 148 | 8 | 2 | 252 | 100 | 323 | 3.25e-21 | 93.2 |
| MS.gene074607.t1 | AT1G63250 | 30.049 | 203 | 117 | 6 | 8 | 202 | 363 | 548 | 5.40e-21 | 92.4 |
| MS.gene074607.t1 | AT3G09720 | 29.767 | 215 | 126 | 5 | 3 | 217 | 171 | 360 | 1.74e-20 | 90.9 |
| MS.gene074607.t1 | AT3G09720 | 29.767 | 215 | 126 | 5 | 3 | 217 | 171 | 360 | 1.74e-20 | 90.9 |
| MS.gene074607.t1 | AT4G09730 | 28.877 | 187 | 123 | 2 | 3 | 188 | 142 | 319 | 3.21e-20 | 90.1 |
| MS.gene074607.t1 | AT2G07750 | 29.412 | 204 | 117 | 7 | 8 | 202 | 410 | 595 | 3.82e-20 | 90.1 |
| MS.gene074607.t1 | AT3G19760 | 28.000 | 200 | 118 | 4 | 2 | 201 | 65 | 238 | 5.65e-20 | 89.0 |
| MS.gene074607.t1 | AT1G12770 | 31.884 | 207 | 127 | 6 | 2 | 199 | 139 | 340 | 1.09e-19 | 88.6 |
| MS.gene074607.t1 | AT1G12770 | 31.884 | 207 | 127 | 6 | 2 | 199 | 139 | 340 | 1.09e-19 | 88.6 |
| MS.gene074607.t1 | AT1G51380 | 27.500 | 200 | 119 | 4 | 2 | 201 | 52 | 225 | 4.35e-18 | 82.4 |
| MS.gene074607.t1 | AT1G51380 | 27.500 | 200 | 119 | 4 | 2 | 201 | 52 | 225 | 4.56e-18 | 82.4 |
| MS.gene074607.t1 | AT1G51380 | 27.500 | 200 | 119 | 4 | 2 | 201 | 52 | 225 | 6.13e-18 | 81.6 |
| MS.gene074607.t1 | AT1G51380 | 27.500 | 200 | 119 | 4 | 2 | 201 | 52 | 225 | 1.33e-17 | 82.0 |
| MS.gene074607.t1 | AT5G11170 | 28.631 | 241 | 131 | 7 | 4 | 234 | 77 | 286 | 2.27e-17 | 81.3 |
| MS.gene074607.t1 | AT5G11200 | 28.631 | 241 | 131 | 7 | 4 | 234 | 77 | 286 | 2.27e-17 | 81.3 |
| MS.gene074607.t1 | AT5G11170 | 28.755 | 233 | 125 | 7 | 12 | 234 | 2 | 203 | 3.66e-17 | 80.1 |
| MS.gene074607.t1 | AT4G34910 | 29.126 | 206 | 121 | 5 | 2 | 201 | 75 | 261 | 3.78e-17 | 81.3 |
| MS.gene074607.t1 | AT5G11200 | 27.839 | 273 | 135 | 10 | 3 | 258 | 76 | 303 | 3.77e-15 | 75.1 |
| MS.gene074607.t1 | AT5G11200 | 29.500 | 200 | 103 | 5 | 4 | 195 | 77 | 246 | 2.47e-14 | 72.8 |
| MS.gene074607.t1 | AT3G53110 | 28.139 | 231 | 136 | 8 | 10 | 234 | 131 | 337 | 8.48e-12 | 65.1 |
Find 65 sgRNAs with CRISPR-Local
Find 65 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCGTTGCTGAGACCGGTTC+TGG | 0.212646 | 8.4:-573349 | MS.gene074607:CDS |
| TTGATGAGAAGAGGATTTAT+AGG | 0.256546 | 8.4:-572898 | MS.gene074607:CDS |
| GGTTAAATTTGCTCAGTATA+TGG | 0.266751 | 8.4:-573185 | MS.gene074607:CDS |
| AAGAAAATCAGCGCTCTTCT+TGG | 0.298072 | 8.4:+572659 | None:intergenic |
| ATTAAAGTTGTTTCCATTGT+TGG | 0.333853 | 8.4:-573160 | MS.gene074607:CDS |
| GCTTCATTCTCCTCACTAAT+AGG | 0.335027 | 8.4:+573274 | None:intergenic |
| GTTAAATTTGCTCAGTATAT+GGG | 0.349756 | 8.4:-573184 | MS.gene074607:CDS |
| AGTTCCTCATCTTCATTCTC+TGG | 0.351472 | 8.4:+572920 | None:intergenic |
| GGGTCCTTATGCTGTTGTTA+TGG | 0.372233 | 8.4:-573248 | MS.gene074607:CDS |
| GGCTGATCGTATGATTGATA+TGG | 0.372547 | 8.4:-572999 | MS.gene074607:CDS |
| TGGTCGTTTGATTGATTGCT+TGG | 0.389906 | 8.4:-573071 | MS.gene074607:CDS |
| CTTCAGCAGCGCGATGTTAT+CGG | 0.392814 | 8.4:-573370 | MS.gene074607:CDS |
| GTACCTATAGTCACGACAAC+AGG | 0.415743 | 8.4:+572806 | None:intergenic |
| GGGGTTTGAGCCGCAGGTCA+TGG | 0.418088 | 8.4:-572978 | MS.gene074607:CDS |
| CTTAAACCCTTGCTCCTCAA+TGG | 0.420410 | 8.4:+573129 | None:intergenic |
| TCTGGTTTGAGATTACTAGA+AGG | 0.435140 | 8.4:+572938 | None:intergenic |
| TGATATGGGGTTTGAGCCGC+AGG | 0.441038 | 8.4:-572984 | MS.gene074607:CDS |
| CGCAGCAGTCTTCCCAGAAC+CGG | 0.444110 | 8.4:+573336 | None:intergenic |
| TTATAAGCTTCAGAGATTGT+TGG | 0.455794 | 8.4:-572721 | MS.gene074607:CDS |
| GCGTTGCTGAGACCGGTTCT+GGG | 0.458342 | 8.4:-573348 | MS.gene074607:CDS |
| CTATGTTGAGTTATATCACT+AGG | 0.463930 | 8.4:-573303 | MS.gene074607:CDS |
| AACCCTGTTGTCGTGACTAT+AGG | 0.480050 | 8.4:-572809 | MS.gene074607:CDS |
| GGGTTTGAGCCGCAGGTCAT+GGG | 0.480370 | 8.4:-572977 | MS.gene074607:CDS |
| GCAAGGGTTTAAGATAAGAC+AGG | 0.485716 | 8.4:-573119 | MS.gene074607:CDS |
| CAGATGGCTGCTATTCCGCT+TGG | 0.486395 | 8.4:-573394 | MS.gene074607:CDS |
| GGCTTGCTAGAAAGTATTTG+AGG | 0.491288 | 8.4:-572832 | MS.gene074607:CDS |
| GCTGATCGTATGATTGATAT+GGG | 0.495582 | 8.4:-572998 | MS.gene074607:CDS |
| CGAGCTTGCTCAGCAGATTG+AGG | 0.503683 | 8.4:-573215 | MS.gene074607:CDS |
| TGCTACCATGCCTCCTGCGG+TGG | 0.509902 | 8.4:-572858 | MS.gene074607:CDS |
| CCATGCCTCCTGCGGTGGAG+AGG | 0.521827 | 8.4:-572853 | MS.gene074607:CDS |
| GTTATCGGCGTTGCTGAGAC+CGG | 0.527614 | 8.4:-573355 | MS.gene074607:CDS |
| ATGAGGAACTTGATGAGAAG+AGG | 0.531706 | 8.4:-572907 | MS.gene074607:CDS |
| GGTGCCATAACAACAGCATA+AGG | 0.532681 | 8.4:+573244 | None:intergenic |
| GCTAAGAATTTGGACAAGGA+AGG | 0.533137 | 8.4:-572636 | MS.gene074607:CDS |
| CTAGCAAGCCTCTCCACCGC+AGG | 0.541300 | 8.4:+572845 | None:intergenic |
| TGCTGAGCAAGCTCGCGAGT+CGG | 0.542852 | 8.4:+573223 | None:intergenic |
| TTAAATTTGCTCAGTATATG+GGG | 0.545312 | 8.4:-573183 | MS.gene074607:CDS |
| AATGGACTGACCACCAACAA+TGG | 0.547761 | 8.4:+573147 | None:intergenic |
| TGTTGGTGGTCAGTCCATTG+AGG | 0.549272 | 8.4:-573143 | MS.gene074607:CDS |
| GTCGTGACTATAGGTACTGC+TGG | 0.550829 | 8.4:-572800 | MS.gene074607:CDS |
| CCTCTCCACCGCAGGAGGCA+TGG | 0.551441 | 8.4:+572853 | None:intergenic |
| GTCAGTCCATTGAGGAGCAA+GGG | 0.551504 | 8.4:-573135 | MS.gene074607:CDS |
| AAAGTTGTTTCCATTGTTGG+TGG | 0.555528 | 8.4:-573157 | MS.gene074607:CDS |
| GCAAGCCTCTCCACCGCAGG+AGG | 0.558194 | 8.4:+572848 | None:intergenic |
| CTTTCATCATGATCACATGC+TGG | 0.567146 | 8.4:+572756 | None:intergenic |
| GAAATTGTGATTGCGACTCC+TGG | 0.569519 | 8.4:-573091 | MS.gene074607:CDS |
| GCCGCAGGTCATGGGTGTGT+TGG | 0.578251 | 8.4:-572969 | MS.gene074607:CDS |
| GGTCAGTCCATTGAGGAGCA+AGG | 0.586693 | 8.4:-573136 | MS.gene074607:CDS |
| TCATTCTCCTCACTAATAGG+AGG | 0.596345 | 8.4:+573277 | None:intergenic |
| CTAGTGATATAACTCAACAT+AGG | 0.604406 | 8.4:+573304 | None:intergenic |
| TAATTATGTTGTTCTTGATG+AGG | 0.610318 | 8.4:-573020 | MS.gene074607:CDS |
| CAAGGGTTTAAGATAAGACA+GGG | 0.610952 | 8.4:-573118 | MS.gene074607:CDS |
| TAGTGAGGAGAATGAAGCTG+AGG | 0.619427 | 8.4:-573269 | MS.gene074607:CDS |
| TTGCTTGGAGCGTCGCTATG+CGG | 0.622750 | 8.4:-573056 | MS.gene074607:CDS |
| TCCAACACACCCATGACCTG+CGG | 0.624778 | 8.4:+572968 | None:intergenic |
| CAAACCAGAGAATGAAGATG+AGG | 0.629792 | 8.4:-572924 | MS.gene074607:CDS |
| AGTGAGGAGAATGAAGCTGA+GGG | 0.635359 | 8.4:-573268 | MS.gene074607:CDS |
| AAGCAATCAATCAAACGACC+AGG | 0.636109 | 8.4:+573073 | None:intergenic |
| CAGTGCTACCATGCCTCCTG+CGG | 0.636466 | 8.4:-572861 | MS.gene074607:CDS |
| TCAGCAGATTGAGGATGAGA+CGG | 0.638997 | 8.4:-573206 | MS.gene074607:CDS |
| TCTTGCTAAGAATTTGGACA+AGG | 0.643179 | 8.4:-572640 | MS.gene074607:CDS |
| TACCTATAGTCACGACAACA+GGG | 0.648496 | 8.4:+572807 | None:intergenic |
| TAGGCTTCCTCCTATTAGTG+AGG | 0.666705 | 8.4:-573284 | MS.gene074607:CDS |
| CTGATCGTATGATTGATATG+GGG | 0.672880 | 8.4:-572997 | MS.gene074607:CDS |
| TCGCGCTGCTGAAGTCCAAG+CGG | 0.697186 | 8.4:+573379 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TAATTATGTTGTTCTTGATG+AGG | - | chr8.4:572996-573015 | MS.gene074607:CDS | 25.0% |
| !! | ATTAAAGTTGTTTCCATTGT+TGG | - | chr8.4:572856-572875 | MS.gene074607:CDS | 25.0% |
| !! | GTTAAATTTGCTCAGTATAT+GGG | - | chr8.4:572832-572851 | MS.gene074607:CDS | 25.0% |
| !! | TGATTTTCTTGCTAAGAATT+TGG | - | chr8.4:573370-573389 | MS.gene074607:CDS | 25.0% |
| !! | TTAAATTTGCTCAGTATATG+GGG | - | chr8.4:572833-572852 | MS.gene074607:CDS | 25.0% |
| CTAGTGATATAACTCAACAT+AGG | + | chr8.4:572715-572734 | None:intergenic | 30.0% | |
| CTATGTTGAGTTATATCACT+AGG | - | chr8.4:572713-572732 | MS.gene074607:CDS | 30.0% | |
| TTATAAGCTTCAGAGATTGT+TGG | - | chr8.4:573295-573314 | MS.gene074607:CDS | 30.0% | |
| TTGATGAGAAGAGGATTTAT+AGG | - | chr8.4:573118-573137 | MS.gene074607:CDS | 30.0% | |
| ! | GGTTAAATTTGCTCAGTATA+TGG | - | chr8.4:572831-572850 | MS.gene074607:CDS | 30.0% |
| CTGATCGTATGATTGATATG+GGG | - | chr8.4:573019-573038 | MS.gene074607:CDS | 35.0% | |
| GCTGATCGTATGATTGATAT+GGG | - | chr8.4:573018-573037 | MS.gene074607:CDS | 35.0% | |
| TCTTGCTAAGAATTTGGACA+AGG | - | chr8.4:573376-573395 | MS.gene074607:CDS | 35.0% | |
| ! | AAAGTTGTTTCCATTGTTGG+TGG | - | chr8.4:572859-572878 | MS.gene074607:CDS | 35.0% |
| ! | CAAGGGTTTAAGATAAGACA+GGG | - | chr8.4:572898-572917 | MS.gene074607:CDS | 35.0% |
| ! | TCTGGTTTGAGATTACTAGA+AGG | + | chr8.4:573081-573100 | None:intergenic | 35.0% |
| AAGAAAATCAGCGCTCTTCT+TGG | + | chr8.4:573360-573379 | None:intergenic | 40.0% | |
| AAGCAATCAATCAAACGACC+AGG | + | chr8.4:572946-572965 | None:intergenic | 40.0% | |
| AGTTCCTCATCTTCATTCTC+TGG | + | chr8.4:573099-573118 | None:intergenic | 40.0% | |
| ATGAGGAACTTGATGAGAAG+AGG | - | chr8.4:573109-573128 | MS.gene074607:CDS | 40.0% | |
| CAAACCAGAGAATGAAGATG+AGG | - | chr8.4:573092-573111 | MS.gene074607:CDS | 40.0% | |
| CTTTCATCATGATCACATGC+TGG | + | chr8.4:573263-573282 | None:intergenic | 40.0% | |
| GCTAAGAATTTGGACAAGGA+AGG | - | chr8.4:573380-573399 | MS.gene074607:CDS | 40.0% | |
| GCTTCATTCTCCTCACTAAT+AGG | + | chr8.4:572745-572764 | None:intergenic | 40.0% | |
| GGCTGATCGTATGATTGATA+TGG | - | chr8.4:573017-573036 | MS.gene074607:CDS | 40.0% | |
| TACCTATAGTCACGACAACA+GGG | + | chr8.4:573212-573231 | None:intergenic | 40.0% | |
| TCATTCTCCTCACTAATAGG+AGG | + | chr8.4:572742-572761 | None:intergenic | 40.0% | |
| TGGTCGTTTGATTGATTGCT+TGG | - | chr8.4:572945-572964 | MS.gene074607:CDS | 40.0% | |
| ! | GCAAGGGTTTAAGATAAGAC+AGG | - | chr8.4:572897-572916 | MS.gene074607:CDS | 40.0% |
| !! | GGCTTGCTAGAAAGTATTTG+AGG | - | chr8.4:573184-573203 | MS.gene074607:CDS | 40.0% |
| AACCCTGTTGTCGTGACTAT+AGG | - | chr8.4:573207-573226 | MS.gene074607:CDS | 45.0% | |
| AGTGAGGAGAATGAAGCTGA+GGG | - | chr8.4:572748-572767 | MS.gene074607:CDS | 45.0% | |
| CTTAAACCCTTGCTCCTCAA+TGG | + | chr8.4:572890-572909 | None:intergenic | 45.0% | |
| GAAATTGTGATTGCGACTCC+TGG | - | chr8.4:572925-572944 | MS.gene074607:CDS | 45.0% | |
| GGGTCCTTATGCTGTTGTTA+TGG | - | chr8.4:572768-572787 | MS.gene074607:CDS | 45.0% | |
| GTACCTATAGTCACGACAAC+AGG | + | chr8.4:573213-573232 | None:intergenic | 45.0% | |
| TAGGCTTCCTCCTATTAGTG+AGG | - | chr8.4:572732-572751 | MS.gene074607:CDS | 45.0% | |
| TAGTGAGGAGAATGAAGCTG+AGG | - | chr8.4:572747-572766 | MS.gene074607:CDS | 45.0% | |
| TCAGCAGATTGAGGATGAGA+CGG | - | chr8.4:572810-572829 | MS.gene074607:CDS | 45.0% | |
| ! | GGTGCCATAACAACAGCATA+AGG | + | chr8.4:572775-572794 | None:intergenic | 45.0% |
| !! | AATGGACTGACCACCAACAA+TGG | + | chr8.4:572872-572891 | None:intergenic | 45.0% |
| CTTCAGCAGCGCGATGTTAT+CGG | - | chr8.4:572646-572665 | MS.gene074607:CDS | 50.0% | |
| GTCAGTCCATTGAGGAGCAA+GGG | - | chr8.4:572881-572900 | MS.gene074607:CDS | 50.0% | |
| ! | GTCGTGACTATAGGTACTGC+TGG | - | chr8.4:573216-573235 | MS.gene074607:CDS | 50.0% |
| !! | TGTTGGTGGTCAGTCCATTG+AGG | - | chr8.4:572873-572892 | MS.gene074607:CDS | 50.0% |
| GGTCAGTCCATTGAGGAGCA+AGG | - | chr8.4:572880-572899 | MS.gene074607:CDS | 55.0% | |
| GTTATCGGCGTTGCTGAGAC+CGG | - | chr8.4:572661-572680 | MS.gene074607:CDS | 55.0% | |
| TCCAACACACCCATGACCTG+CGG | + | chr8.4:573051-573070 | None:intergenic | 55.0% | |
| TGATATGGGGTTTGAGCCGC+AGG | - | chr8.4:573032-573051 | MS.gene074607:CDS | 55.0% | |
| ! | CGAGCTTGCTCAGCAGATTG+AGG | - | chr8.4:572801-572820 | MS.gene074607:CDS | 55.0% |
| !! | TTGCTTGGAGCGTCGCTATG+CGG | - | chr8.4:572960-572979 | MS.gene074607:CDS | 55.0% |
| CAGTGCTACCATGCCTCCTG+CGG | - | chr8.4:573155-573174 | MS.gene074607:CDS | 60.0% | |
| CGCAGCAGTCTTCCCAGAAC+CGG | + | chr8.4:572683-572702 | None:intergenic | 60.0% | |
| GGGTTTGAGCCGCAGGTCAT+GGG | - | chr8.4:573039-573058 | MS.gene074607:CDS | 60.0% | |
| TCGCGCTGCTGAAGTCCAAG+CGG | + | chr8.4:572640-572659 | None:intergenic | 60.0% | |
| TGCTGAGCAAGCTCGCGAGT+CGG | + | chr8.4:572796-572815 | None:intergenic | 60.0% | |
| ! | GCGTTGCTGAGACCGGTTCT+GGG | - | chr8.4:572668-572687 | MS.gene074607:CDS | 60.0% |
| CTAGCAAGCCTCTCCACCGC+AGG | + | chr8.4:573174-573193 | None:intergenic | 65.0% | |
| GCCGCAGGTCATGGGTGTGT+TGG | - | chr8.4:573047-573066 | MS.gene074607:CDS | 65.0% | |
| GGGGTTTGAGCCGCAGGTCA+TGG | - | chr8.4:573038-573057 | MS.gene074607:CDS | 65.0% | |
| TGCTACCATGCCTCCTGCGG+TGG | - | chr8.4:573158-573177 | MS.gene074607:CDS | 65.0% | |
| ! | GGCGTTGCTGAGACCGGTTC+TGG | - | chr8.4:572667-572686 | MS.gene074607:CDS | 65.0% |
| CCATGCCTCCTGCGGTGGAG+AGG | - | chr8.4:573163-573182 | MS.gene074607:CDS | 70.0% | |
| CCTCTCCACCGCAGGAGGCA+TGG | + | chr8.4:573166-573185 | None:intergenic | 70.0% | |
| GCAAGCCTCTCCACCGCAGG+AGG | + | chr8.4:573171-573190 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 572625 | 573413 | 572625 | ID=MS.gene074607 |
| chr8.4 | mRNA | 572625 | 573413 | 572625 | ID=MS.gene074607.t1;Parent=MS.gene074607 |
| chr8.4 | exon | 572625 | 573413 | 572625 | ID=MS.gene074607.t1.exon1;Parent=MS.gene074607.t1 |
| chr8.4 | CDS | 572625 | 573413 | 572625 | ID=cds.MS.gene074607.t1;Parent=MS.gene074607.t1 |
| Gene Sequence |
| Protein sequence |
