Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08488.t1 | XP_013444510.1 | 98.2 | 224 | 4 | 0 | 96 | 319 | 92 | 315 | 1.80E-122 | 449.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08488.t1 | Q9H9Y2 | 51.2 | 201 | 97 | 1 | 96 | 295 | 109 | 309 | 1.4e-51 | 204.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08488.t1 | A0A072TYA8 | 98.2 | 224 | 4 | 0 | 96 | 319 | 92 | 315 | 1.3e-122 | 449.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049411 | MS.gene08488 | 0.82571 | 4.04E-54 | -1.69E-46 |
| MS.gene058245 | MS.gene08488 | 0.829366 | 5.36E-55 | -1.69E-46 |
| MS.gene060574 | MS.gene08488 | 0.819406 | 1.18E-52 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08488.t1 | MTR_8g023820 | 93.373 | 332 | 17 | 2 | 1 | 331 | 1 | 328 | 0.0 | 626 |
| MS.gene08488.t1 | MTR_3g019370 | 34.419 | 215 | 111 | 5 | 70 | 281 | 50 | 237 | 2.41e-31 | 119 |
| MS.gene08488.t1 | MTR_1g087510 | 62.821 | 78 | 10 | 2 | 33 | 110 | 2 | 60 | 3.51e-20 | 86.7 |
| MS.gene08488.t1 | MTR_1g054855 | 80.357 | 56 | 11 | 0 | 40 | 95 | 1 | 56 | 3.84e-20 | 83.2 |
| MS.gene08488.t1 | MTR_8g066245 | 48.810 | 84 | 27 | 4 | 33 | 110 | 2 | 75 | 5.27e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08488.t1 | AT4G01560 | 75.084 | 297 | 70 | 3 | 3 | 298 | 1 | 294 | 1.26e-159 | 450 |
| MS.gene08488.t1 | AT1G63780 | 41.667 | 168 | 92 | 3 | 117 | 281 | 73 | 237 | 1.13e-34 | 129 |
Find 74 sgRNAs with CRISPR-Local
Find 312 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGATGCTCTCTTGATTAT+TGG | 0.136869 | 8.2:-72158593 | MS.gene08488:intron |
| CCCCAAGATCCCGAGTTTAA+AGG | 0.228228 | 8.2:-72157659 | MS.gene08488:CDS |
| CCCTTTAAACTCGGGATCTT+GGG | 0.231737 | 8.2:+72157658 | None:intergenic |
| TTCCGTTCCTGTTTCCGTTC+TGG | 0.284839 | 8.2:+72161916 | None:intergenic |
| GCCCTTTAAACTCGGGATCT+TGG | 0.298570 | 8.2:+72157657 | None:intergenic |
| TAAAACAATTGCCCGTCTTC+AGG | 0.332177 | 8.2:-72157398 | MS.gene08488:intron |
| GCAAGTGGTGATTAATATCT+TGG | 0.337449 | 8.2:+72159168 | None:intergenic |
| ATTTGTTTGCAGCTATTTGC+TGG | 0.345769 | 8.2:-72159238 | MS.gene08488:intron |
| TTTAATATCAGAATTGCTTC+AGG | 0.350037 | 8.2:-72158920 | MS.gene08488:CDS |
| AAATGAGCAGTAGGTCCTTC+AGG | 0.362193 | 8.2:+72158566 | None:intergenic |
| CTCTTGAAGTAATGTGCATT+TGG | 0.364971 | 8.2:+72158892 | None:intergenic |
| CCCAAGATCCCGAGTTTAAA+GGG | 0.366033 | 8.2:-72157658 | MS.gene08488:CDS |
| TGTTGAATATGCAAACAAAA+AGG | 0.392477 | 8.2:-72158749 | MS.gene08488:CDS |
| AACTCAACCTCTTCATCATC+AGG | 0.420118 | 8.2:+72161588 | None:intergenic |
| TGTGTCCCCTTGCAGAATCA+TGG | 0.442254 | 8.2:-72158096 | MS.gene08488:intron |
| TAATCATCGAAGGACGGAAC+GGG | 0.458251 | 8.2:+72161885 | None:intergenic |
| CAGTGGTAGACTGGTAGTCT+TGG | 0.463649 | 8.2:-72157008 | MS.gene08488:CDS |
| AGCTCAGGCTGGTGACTGGT+TGG | 0.478829 | 8.2:+72158069 | None:intergenic |
| CACTTGCCGCTTCAATTCTA+CGG | 0.479733 | 8.2:-72159152 | MS.gene08488:intron |
| GCTCAGGCTGGTGACTGGTT+GGG | 0.480294 | 8.2:+72158070 | None:intergenic |
| GTCTTCGGCACCTTCTTCTC+CGG | 0.480606 | 8.2:+72161651 | None:intergenic |
| ATATGAAGTCTCTCTGGTTG+TGG | 0.489756 | 8.2:+72157618 | None:intergenic |
| AGAGAGACTTCATATTCTTC+CGG | 0.494821 | 8.2:-72157610 | MS.gene08488:CDS |
| TTGGTGGATGCAGTATCCTC+AGG | 0.495230 | 8.2:-72156989 | MS.gene08488:CDS |
| ATTATAGCTCAGTGGTAGAC+TGG | 0.499120 | 8.2:-72157017 | MS.gene08488:intron |
| CGAAGACGATTGAAAATACA+AGG | 0.499632 | 8.2:-72161635 | MS.gene08488:CDS |
| TACACGTCGCCCTTTAAACT+CGG | 0.500125 | 8.2:+72157649 | None:intergenic |
| CACAAGCTCAGGCTGGTGAC+TGG | 0.500662 | 8.2:+72158065 | None:intergenic |
| TGGTAGACTGGTAGTCTTGG+TGG | 0.501565 | 8.2:-72157005 | MS.gene08488:CDS |
| CAAGTGGTGATTAATATCTT+GGG | 0.501651 | 8.2:+72159169 | None:intergenic |
| AAGTTGTTCAACACAAGCTC+AGG | 0.513960 | 8.2:+72158054 | None:intergenic |
| CCTTTAAACTCGGGATCTTG+GGG | 0.514110 | 8.2:+72157659 | None:intergenic |
| GTTGTAGCCTCCGGAGAAGA+AGG | 0.514510 | 8.2:-72161661 | MS.gene08488:intron |
| CTTCTTCTGATGCTTAAGCT+TGG | 0.520074 | 8.2:+72161832 | None:intergenic |
| TTGATTATTGGCTTACCTGA+AGG | 0.520117 | 8.2:-72158581 | MS.gene08488:CDS |
| TCATATTCTTCCGGCATCAT+CGG | 0.521685 | 8.2:-72157601 | MS.gene08488:intron |
| GGAAGAATATGAAGTCTCTC+TGG | 0.523080 | 8.2:+72157612 | None:intergenic |
| CCTACTTGGTTCCCTACGAT+TGG | 0.527299 | 8.2:+72158699 | None:intergenic |
| AGCAATTCTGATATTAAAGC+AGG | 0.533676 | 8.2:+72158925 | None:intergenic |
| AACAACTTCACAACACGCCT+AGG | 0.543084 | 8.2:-72158039 | MS.gene08488:CDS |
| TCTTTGTTCTTAATCATCGA+AGG | 0.545212 | 8.2:+72161875 | None:intergenic |
| GGAAACAGGAACGGAAACGA+AGG | 0.550190 | 8.2:-72161909 | MS.gene08488:CDS |
| ATTGACACCAACCTGAAGAC+GGG | 0.550528 | 8.2:+72157387 | None:intergenic |
| CAATGGCGATCGGTGGAAAG+AGG | 0.566083 | 8.2:-72161988 | MS.gene08488:CDS |
| TTAATCATCGAAGGACGGAA+CGG | 0.568387 | 8.2:+72161884 | None:intergenic |
| GTGAGTTTGAAATGAGCAGT+AGG | 0.571962 | 8.2:+72158557 | None:intergenic |
| AACCAGAACGGAAACAGGAA+CGG | 0.572119 | 8.2:-72161918 | MS.gene08488:CDS |
| AAGAATTGTACCGATGATGC+CGG | 0.586114 | 8.2:+72157591 | None:intergenic |
| GTTAAAAGAGCTATTGAGCT+CGG | 0.586757 | 8.2:-72161770 | MS.gene08488:CDS |
| AATTGACACCAACCTGAAGA+CGG | 0.586946 | 8.2:+72157386 | None:intergenic |
| TGTTCTTAATCATCGAAGGA+CGG | 0.587385 | 8.2:+72161879 | None:intergenic |
| TTGCAAGCCTGATGATGAAG+AGG | 0.594460 | 8.2:-72161595 | MS.gene08488:intron |
| GAAGTCTCTCTGGTTGTGGA+AGG | 0.594781 | 8.2:+72157622 | None:intergenic |
| TGTTCAACACAAGCTCAGGC+TGG | 0.595435 | 8.2:+72158058 | None:intergenic |
| AATTCAGTTCAATATTAAAG+CGG | 0.596200 | 8.2:-72159201 | MS.gene08488:CDS |
| ACCTTCCAACTCGATGCCCT+AGG | 0.597115 | 8.2:+72158022 | None:intergenic |
| TTCGGCACCTTCTTCTCCGG+AGG | 0.599893 | 8.2:+72161654 | None:intergenic |
| TAGTTGTACACACCAATCGT+AGG | 0.607640 | 8.2:-72158711 | MS.gene08488:CDS |
| CGTAGAATTGAAGCGGCAAG+TGG | 0.609118 | 8.2:+72159153 | None:intergenic |
| GTTATTCCTACAATGGCGAT+CGG | 0.609248 | 8.2:-72161998 | None:intergenic |
| AGCTATTGAGCTCGGCGAAG+AGG | 0.611918 | 8.2:-72161762 | MS.gene08488:intron |
| TTCTTGCCATTATAGCTCAG+TGG | 0.612720 | 8.2:-72157025 | MS.gene08488:intron |
| AACATACCGTAGAATTGAAG+CGG | 0.614066 | 8.2:+72159146 | None:intergenic |
| ACACGTCGCCCTTTAAACTC+GGG | 0.626716 | 8.2:+72157650 | None:intergenic |
| GCCTAGGGCATCGAGTTGGA+AGG | 0.627771 | 8.2:-72158023 | MS.gene08488:intron |
| ACACGCCTAGGGCATCGAGT+TGG | 0.629464 | 8.2:-72158027 | MS.gene08488:CDS |
| ACAACTTCACAACACGCCTA+GGG | 0.637320 | 8.2:-72158038 | MS.gene08488:CDS |
| AGTTGTACACACCAATCGTA+GGG | 0.643789 | 8.2:-72158710 | MS.gene08488:CDS |
| ATTCCTACAATGGCGATCGG+TGG | 0.646182 | 8.2:-72161995 | None:intergenic |
| AATGCACATTACTTCAAGAG+AGG | 0.646448 | 8.2:-72158889 | MS.gene08488:CDS |
| AAGCGCAACAATGATTCAGA+CGG | 0.648847 | 8.2:-72161965 | MS.gene08488:CDS |
| CTTTAAACTCGGGATCTTGG+GGG | 0.666978 | 8.2:+72157660 | None:intergenic |
| TTGCAGGTACTCAAAACCTG+AGG | 0.700204 | 8.2:+72156973 | None:intergenic |
| GAAGACGATTGAAAATACAA+GGG | 0.727075 | 8.2:-72161634 | MS.gene08488:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTGTTATAATGAAAAA+TGG | + | chr8.2:72161163-72161182 | None:intergenic | 10.0% |
| !! | AAAAACAAAATCAACAAATA+AGG | + | chr8.2:72161250-72161269 | None:intergenic | 15.0% |
| !! | CAATACTTAAAATATACAAT+GGG | - | chr8.2:72158878-72158897 | MS.gene08488:CDS | 15.0% |
| !! | GTTGTTTATAAATATAACAA+TGG | - | chr8.2:72160458-72160477 | MS.gene08488:intron | 15.0% |
| !! | TTTAGATAATTAGAAAATGA+TGG | - | chr8.2:72157668-72157687 | MS.gene08488:CDS | 15.0% |
| !!! | AAATACTTCTAGTTTTTAAA+TGG | + | chr8.2:72158489-72158508 | None:intergenic | 15.0% |
| !!! | AAATGATGTATTCAATTTTT+TGG | - | chr8.2:72158516-72158535 | MS.gene08488:intron | 15.0% |
| !!! | AACTATTTTAAGAGAATTTA+AGG | - | chr8.2:72159345-72159364 | MS.gene08488:intron | 15.0% |
| !!! | AATACTTCTAGTTTTTAAAT+GGG | + | chr8.2:72158488-72158507 | None:intergenic | 15.0% |
| !!! | ACTATTTTAAGAGAATTTAA+GGG | - | chr8.2:72159346-72159365 | MS.gene08488:intron | 15.0% |
| !!! | AGAATATATATTTTGGTTAT+TGG | - | chr8.2:72157457-72157476 | MS.gene08488:CDS | 15.0% |
| !!! | GAGATTAGAAATTTTTTTAA+CGG | + | chr8.2:72158794-72158813 | None:intergenic | 15.0% |
| !!! | TGCTGTTTTTTTTTTTTTTT+GGG | - | chr8.2:72158287-72158306 | MS.gene08488:intron | 15.0% |
| !!! | TGTTATTTAAAGATATCTTA+GGG | - | chr8.2:72159406-72159425 | MS.gene08488:intron | 15.0% |
| !! | AAAAAATAAACTATGATGCT+AGG | - | chr8.2:72157529-72157548 | MS.gene08488:intron | 20.0% |
| !! | AACTCTAGATTATATAAACT+AGG | - | chr8.2:72159548-72159567 | MS.gene08488:intron | 20.0% |
| !! | AATTCAGTTCAATATTAAAG+CGG | - | chr8.2:72159752-72159771 | MS.gene08488:intron | 20.0% |
| !! | ACGTAAGTTATATATAATAG+TGG | - | chr8.2:72161717-72161736 | MS.gene08488:intron | 20.0% |
| !! | ACTCTAGATTATATAAACTA+GGG | - | chr8.2:72159549-72159568 | MS.gene08488:intron | 20.0% |
| !! | AGAGTATAAACCTATTAATT+TGG | + | chr8.2:72159067-72159086 | None:intergenic | 20.0% |
| !! | ATCCATTCATTTATTTGAAT+AGG | - | chr8.2:72158159-72158178 | MS.gene08488:intron | 20.0% |
| !! | ATGTCTATTATAAAACTAGA+GGG | - | chr8.2:72159375-72159394 | MS.gene08488:intron | 20.0% |
| !! | ATTAAAAAGATTGAGTCTAA+AGG | - | chr8.2:72161490-72161509 | MS.gene08488:intron | 20.0% |
| !! | CCAATCATACATAAAAATTT+AGG | + | chr8.2:72157413-72157432 | None:intergenic | 20.0% |
| !! | GAAAATAATGATGTTGTTAA+CGG | - | chr8.2:72159286-72159305 | MS.gene08488:intron | 20.0% |
| !! | GCAATACTTAAAATATACAA+TGG | - | chr8.2:72158877-72158896 | MS.gene08488:CDS | 20.0% |
| !! | GTTATTTAAAGATATCTTAG+GGG | - | chr8.2:72159407-72159426 | MS.gene08488:intron | 20.0% |
| !! | TATGATTTAAAAAAGGTGAT+GGG | - | chr8.2:72160091-72160110 | MS.gene08488:intron | 20.0% |
| !! | TTATTTCCTTTAAGCTTAAA+GGG | + | chr8.2:72159530-72159549 | None:intergenic | 20.0% |
| !!! | AAAAACTAGAAGTATTTTGT+TGG | - | chr8.2:72158492-72158511 | MS.gene08488:intron | 20.0% |
| !!! | AAAATATACAATGGGTTTTT+TGG | - | chr8.2:72158886-72158905 | MS.gene08488:CDS | 20.0% |
| !!! | AAATATACAATGGGTTTTTT+GGG | - | chr8.2:72158887-72158906 | MS.gene08488:CDS | 20.0% |
| !!! | AACAACATCATTATTTTCAA+TGG | + | chr8.2:72159284-72159303 | None:intergenic | 20.0% |
| !!! | AATTTCGATCATTGATTTTT+GGG | - | chr8.2:72158666-72158685 | MS.gene08488:intron | 20.0% |
| !!! | ACAATCTTTAAAATATGAGT+AGG | + | chr8.2:72160300-72160319 | None:intergenic | 20.0% |
| !!! | ATATTTTTAGGTTTCAAAGT+TGG | - | chr8.2:72157779-72157798 | MS.gene08488:intron | 20.0% |
| !!! | ATTATTTTCAAGGCTTTTAA+AGG | + | chr8.2:72159158-72159177 | None:intergenic | 20.0% |
| !!! | CATGACTTTTTTTTTTTTAC+AGG | + | chr8.2:72160616-72160635 | None:intergenic | 20.0% |
| !!! | CCTAAATTTTTATGTATGAT+TGG | - | chr8.2:72157410-72157429 | MS.gene08488:CDS | 20.0% |
| !!! | CTCAATCTTTTTAATTTCTT+TGG | + | chr8.2:72161485-72161504 | None:intergenic | 20.0% |
| !!! | CTGCTGTTTTTTTTTTTTTT+TGG | - | chr8.2:72158286-72158305 | MS.gene08488:intron | 20.0% |
| !!! | CTGTTTTTTTTTTTTTTTGG+GGG | - | chr8.2:72158289-72158308 | MS.gene08488:intron | 20.0% |
| !!! | GAACTTGATAGAATATTTTT+AGG | - | chr8.2:72157767-72157786 | MS.gene08488:intron | 20.0% |
| !!! | GCTGTTTTTTTTTTTTTTTG+GGG | - | chr8.2:72158288-72158307 | MS.gene08488:intron | 20.0% |
| !!! | GTGTTATTTAAAGATATCTT+AGG | - | chr8.2:72159405-72159424 | MS.gene08488:intron | 20.0% |
| !!! | GTTAGGATTTTATTATCAAA+GGG | - | chr8.2:72157824-72157843 | MS.gene08488:intron | 20.0% |
| !!! | TGAGTGTAGAATATATATTT+TGG | - | chr8.2:72157450-72157469 | MS.gene08488:CDS | 20.0% |
| !!! | TGTTAGGATTTTATTATCAA+AGG | - | chr8.2:72157823-72157842 | MS.gene08488:intron | 20.0% |
| !!! | TTAGTCAACAGAATTTATTT+TGG | + | chr8.2:72159689-72159708 | None:intergenic | 20.0% |
| !!! | TTTTTTGCAATCACTTATTT+GGG | - | chr8.2:72159025-72159044 | MS.gene08488:intron | 20.0% |
| !!! | TTTTTTTGCAATCACTTATT+TGG | - | chr8.2:72159024-72159043 | MS.gene08488:intron | 20.0% |
| ! | AAAAGCCTTGAAAATAATGA+TGG | - | chr8.2:72159160-72159179 | MS.gene08488:CDS | 25.0% |
| ! | AAAGTGGAATTCATCTAAAT+AGG | + | chr8.2:72160736-72160755 | None:intergenic | 25.0% |
| ! | AACAAAGTCTAATCAAAAAG+TGG | + | chr8.2:72160752-72160771 | None:intergenic | 25.0% |
| ! | AGGAACCTATGATTTAAAAA+AGG | - | chr8.2:72160084-72160103 | MS.gene08488:intron | 25.0% |
| ! | AGTTTCTACGAGAAATTATA+TGG | - | chr8.2:72157719-72157738 | MS.gene08488:intron | 25.0% |
| ! | ATGGACAAAACCAAATTAAT+AGG | - | chr8.2:72159054-72159073 | MS.gene08488:intron | 25.0% |
| ! | ATTATAACAAATATCTCCTC+TGG | - | chr8.2:72161169-72161188 | MS.gene08488:intron | 25.0% |
| ! | CACCTATTCAAATAAATGAA+TGG | + | chr8.2:72158164-72158183 | None:intergenic | 25.0% |
| ! | CATGTCTATTATAAAACTAG+AGG | - | chr8.2:72159374-72159393 | MS.gene08488:intron | 25.0% |
| ! | CTAAGCAGTAAGTATTATTA+TGG | - | chr8.2:72161085-72161104 | MS.gene08488:intron | 25.0% |
| ! | CTATGATTTAAAAAAGGTGA+TGG | - | chr8.2:72160090-72160109 | MS.gene08488:intron | 25.0% |
| ! | GGATTTGGCTATTATAAAAT+AGG | - | chr8.2:72157740-72157759 | MS.gene08488:intron | 25.0% |
| ! | TAATTAGAAAATGATGGTAG+CGG | - | chr8.2:72157674-72157693 | MS.gene08488:CDS | 25.0% |
| ! | TACGAGAAATTATATGGATT+TGG | - | chr8.2:72157725-72157744 | MS.gene08488:intron | 25.0% |
| ! | TGTCTATTATAAAACTAGAG+GGG | - | chr8.2:72159376-72159395 | MS.gene08488:intron | 25.0% |
| ! | TGTTGAATATGCAAACAAAA+AGG | - | chr8.2:72160204-72160223 | MS.gene08488:intron | 25.0% |
| ! | TTCCACTTAAATTCTTAGAT+AGG | - | chr8.2:72160558-72160577 | MS.gene08488:intron | 25.0% |
| ! | TTTAATATCAGAATTGCTTC+AGG | - | chr8.2:72160033-72160052 | MS.gene08488:intron | 25.0% |
| !! | AATTTACATTGACTAGTCAA+TGG | + | chr8.2:72161634-72161653 | None:intergenic | 25.0% |
| !! | CACCAATAATTTGAAACAAA+TGG | + | chr8.2:72161404-72161423 | None:intergenic | 25.0% |
| !! | GTTATTTCCTTTAAGCTTAA+AGG | + | chr8.2:72159531-72159550 | None:intergenic | 25.0% |
| !! | TACTCCTAAAAGTGTAAAAT+AGG | + | chr8.2:72159922-72159941 | None:intergenic | 25.0% |
| !! | TCACTTATTTGGGATAAAAA+TGG | - | chr8.2:72159035-72159054 | MS.gene08488:intron | 25.0% |
| !! | TGCCATTTGTTTCAAATTAT+TGG | - | chr8.2:72161399-72161418 | MS.gene08488:intron | 25.0% |
| !! | TTTGATTAGACTTTGTTATC+TGG | - | chr8.2:72160755-72160774 | MS.gene08488:intron | 25.0% |
| !!! | ATTTTAAGAGAATTTAAGGG+AGG | - | chr8.2:72159349-72159368 | MS.gene08488:intron | 25.0% |
| !!! | CAATTTCGATCATTGATTTT+TGG | - | chr8.2:72158665-72158684 | MS.gene08488:intron | 25.0% |
| !!! | CATCACCTTTTTTAAATCAT+AGG | + | chr8.2:72160092-72160111 | None:intergenic | 25.0% |
| !!! | TTTTCATTGCTTTTATTGTG+TGG | - | chr8.2:72161690-72161709 | MS.gene08488:intron | 25.0% |
| AAATCAAATCAAGAAGGCAA+GGG | + | chr8.2:72159894-72159913 | None:intergenic | 30.0% | |
| AATAGGTTTATACTCTGCAA+CGG | - | chr8.2:72159071-72159090 | MS.gene08488:intron | 30.0% | |
| AATATACCTAAGAACGTGAT+TGG | + | chr8.2:72161455-72161474 | None:intergenic | 30.0% | |
| ACAACAATGGCAGTAATATT+CGG | - | chr8.2:72159225-72159244 | MS.gene08488:CDS | 30.0% | |
| ACGAAACAAGAGTAATTCTT+GGG | - | chr8.2:72159581-72159600 | MS.gene08488:intron | 30.0% | |
| AGCAATTCTGATATTAAAGC+AGG | + | chr8.2:72160031-72160050 | None:intergenic | 30.0% | |
| AGCTATTCAACGAAAAATCA+AGG | + | chr8.2:72159450-72159469 | None:intergenic | 30.0% | |
| AGTAGTAGTAAAAGGAAGAT+AGG | - | chr8.2:72161853-72161872 | MS.gene08488:CDS | 30.0% | |
| AGTATTGCAATATGCTTTCA+TGG | + | chr8.2:72158865-72158884 | None:intergenic | 30.0% | |
| ATTGTCTACTCATGTGATTT+AGG | - | chr8.2:72161802-72161821 | MS.gene08488:CDS | 30.0% | |
| ATTTAAAGATATCTTAGGGG+AGG | - | chr8.2:72159410-72159429 | MS.gene08488:intron | 30.0% | |
| CAACAGAAATTCTAAACAAC+AGG | + | chr8.2:72158396-72158415 | None:intergenic | 30.0% | |
| CAAGTGGTGATTAATATCTT+GGG | + | chr8.2:72159787-72159806 | None:intergenic | 30.0% | |
| CCTTGAAAAGTTTACAACAA+TGG | - | chr8.2:72159212-72159231 | MS.gene08488:CDS | 30.0% | |
| CTCCTATCTAAGAATTTAAG+TGG | + | chr8.2:72160563-72160582 | None:intergenic | 30.0% | |
| GAAGACGATTGAAAATACAA+GGG | - | chr8.2:72157319-72157338 | MS.gene08488:intron | 30.0% | |
| GACATTTACACAAAGCTTAA+GGG | + | chr8.2:72158708-72158727 | None:intergenic | 30.0% | |
| GCTATTCAACGAAAAATCAA+GGG | + | chr8.2:72159449-72159468 | None:intergenic | 30.0% | |
| GTCTATTATAAAACTAGAGG+GGG | - | chr8.2:72159377-72159396 | MS.gene08488:intron | 30.0% | |
| GTTTGTTCTATGAATGGTAT+TGG | - | chr8.2:72158135-72158154 | MS.gene08488:intron | 30.0% | |
| TAACAGTGTTAAGTCACAAA+GGG | - | chr8.2:72159314-72159333 | MS.gene08488:intron | 30.0% | |
| TACACTGTGAGATTTGAATT+AGG | - | chr8.2:72157495-72157514 | MS.gene08488:intron | 30.0% | |
| TCTTTGTTCTTAATCATCGA+AGG | + | chr8.2:72157081-72157100 | None:intergenic | 30.0% | |
| TGACATTTACACAAAGCTTA+AGG | + | chr8.2:72158709-72158728 | None:intergenic | 30.0% | |
| TGGCACTAACAATATAAGAA+AGG | + | chr8.2:72161143-72161162 | None:intergenic | 30.0% | |
| TTAACAGTGTTAAGTCACAA+AGG | - | chr8.2:72159313-72159332 | MS.gene08488:intron | 30.0% | |
| TTGTCATGTGAGAAAATAGA+GGG | + | chr8.2:72158740-72158759 | None:intergenic | 30.0% | |
| TTTGTCATGTGAGAAAATAG+AGG | + | chr8.2:72158741-72158760 | None:intergenic | 30.0% | |
| ! | ATATGACAATTTGGGTTCTT+TGG | - | chr8.2:72158012-72158031 | MS.gene08488:intron | 30.0% |
| ! | CAAATTATTGACTAGTAGTC+TGG | - | chr8.2:72161771-72161790 | MS.gene08488:CDS | 30.0% |
| ! | CAACTTGTTTGTTCTATGAA+TGG | - | chr8.2:72158129-72158148 | MS.gene08488:intron | 30.0% |
| ! | CAGTGTTTCTATGTAATGAT+GGG | - | chr8.2:72161194-72161213 | MS.gene08488:intron | 30.0% |
| ! | CCATTGTTGTAAACTTTTCA+AGG | + | chr8.2:72159215-72159234 | None:intergenic | 30.0% |
| ! | CTTGTATTTTCAATCGTCTT+CGG | + | chr8.2:72157320-72157339 | None:intergenic | 30.0% |
| ! | GCATCCTATTTTACACTTTT+AGG | - | chr8.2:72159915-72159934 | MS.gene08488:intron | 30.0% |
| ! | TCAGTGTTTCTATGTAATGA+TGG | - | chr8.2:72161193-72161212 | MS.gene08488:intron | 30.0% |
| ! | TGTTTTACGCAAGGATATTA+AGG | - | chr8.2:72160425-72160444 | MS.gene08488:intron | 30.0% |
| !! | AAGGAAACTTAGTTTGTAGT+TGG | - | chr8.2:72157879-72157898 | MS.gene08488:intron | 30.0% |
| !!! | TTTAGTCATGCGTTTTGATT+TGG | - | chr8.2:72157931-72157950 | MS.gene08488:intron | 30.0% |
| AAACGCATGACTAAATTGTG+TGG | + | chr8.2:72157926-72157945 | None:intergenic | 35.0% | |
| AAAGGTAAAAATGACGAGGA+TGG | - | chr8.2:72161508-72161527 | MS.gene08488:intron | 35.0% | |
| AAATAGGTAAGACAAAGTGC+AGG | + | chr8.2:72160720-72160739 | None:intergenic | 35.0% | |
| AACATACCGTAGAATTGAAG+CGG | + | chr8.2:72159810-72159829 | None:intergenic | 35.0% | |
| AATGCACATTACTTCAAGAG+AGG | - | chr8.2:72160064-72160083 | MS.gene08488:intron | 35.0% | |
| AGAGAGACTTCATATTCTTC+CGG | - | chr8.2:72161343-72161362 | MS.gene08488:intron | 35.0% | |
| ATCTGAATCAACATGTCGAT+AGG | + | chr8.2:72158983-72159002 | None:intergenic | 35.0% | |
| ATGGCCATTGAGTTTGAAAA+TGG | + | chr8.2:72161615-72161634 | None:intergenic | 35.0% | |
| ATTGCAATATGCTTTCATGG+TGG | + | chr8.2:72158862-72158881 | None:intergenic | 35.0% | |
| ATTTACACAAAGCTTAAGGG+AGG | + | chr8.2:72158705-72158724 | None:intergenic | 35.0% | |
| ATTTGTTTGCAGCTATTTGC+TGG | - | chr8.2:72159715-72159734 | MS.gene08488:intron | 35.0% | |
| CAAATCAAATCAAGAAGGCA+AGG | + | chr8.2:72159895-72159914 | None:intergenic | 35.0% | |
| CACGAAACAAGAGTAATTCT+TGG | - | chr8.2:72159580-72159599 | MS.gene08488:intron | 35.0% | |
| CCATTGAGTTTGAAAATGGA+AGG | + | chr8.2:72161611-72161630 | None:intergenic | 35.0% | |
| CGAAGACGATTGAAAATACA+AGG | - | chr8.2:72157318-72157337 | MS.gene08488:intron | 35.0% | |
| CGTATGGCATATGACAATTT+GGG | - | chr8.2:72158004-72158023 | MS.gene08488:intron | 35.0% | |
| CTCTTGAAGTAATGTGCATT+TGG | + | chr8.2:72160064-72160083 | None:intergenic | 35.0% | |
| GAATACAAACAACAGACTAG+AGG | + | chr8.2:72159834-72159853 | None:intergenic | 35.0% | |
| GATGCCAAATCAAATCAAGA+AGG | + | chr8.2:72159900-72159919 | None:intergenic | 35.0% | |
| GCAAGTGGTGATTAATATCT+TGG | + | chr8.2:72159788-72159807 | None:intergenic | 35.0% | |
| GCGTTGAAAGTAGTAGTAAA+AGG | - | chr8.2:72161845-72161864 | MS.gene08488:CDS | 35.0% | |
| GTCAAAAATCAACAGACAGA+TGG | + | chr8.2:72159991-72160010 | None:intergenic | 35.0% | |
| GTCTAAAGGTAAAAATGACG+AGG | - | chr8.2:72161504-72161523 | MS.gene08488:intron | 35.0% | |
| GTTAAAAGAGCTATTGAGCT+CGG | - | chr8.2:72157183-72157202 | MS.gene08488:intron | 35.0% | |
| TCAGATGCTCTCTTGATTAT+TGG | - | chr8.2:72160360-72160379 | MS.gene08488:intron | 35.0% | |
| TCCTTTAAGCTTAAAGGGAT+GGG | + | chr8.2:72159525-72159544 | None:intergenic | 35.0% | |
| TCGTATGGCATATGACAATT+TGG | - | chr8.2:72158003-72158022 | MS.gene08488:intron | 35.0% | |
| TGAGTAGGATCTTTACTCAA+AGG | + | chr8.2:72160285-72160304 | None:intergenic | 35.0% | |
| TGTCATGTGAGAAAATAGAG+GGG | + | chr8.2:72158739-72158758 | None:intergenic | 35.0% | |
| TGTTATCTGGAAAGATCAAG+TGG | - | chr8.2:72160768-72160787 | MS.gene08488:intron | 35.0% | |
| TGTTCTTAATCATCGAAGGA+CGG | + | chr8.2:72157077-72157096 | None:intergenic | 35.0% | |
| TTCCAAGAGAAAAACCAGAA+CGG | - | chr8.2:72157023-72157042 | MS.gene08488:intron | 35.0% | |
| TTCCTTAACTAGTGCTCTAA+GGG | + | chr8.2:72157865-72157884 | None:intergenic | 35.0% | |
| TTCCTTTAAGCTTAAAGGGA+TGG | + | chr8.2:72159526-72159545 | None:intergenic | 35.0% | |
| TTTCCTTAACTAGTGCTCTA+AGG | + | chr8.2:72157866-72157885 | None:intergenic | 35.0% | |
| ! | AGAAAATTCGAAAGGGGTTT+TGG | - | chr8.2:72157979-72157998 | MS.gene08488:intron | 35.0% |
| ! | AGAATTACTCTTGTTTCGTG+TGG | + | chr8.2:72159580-72159599 | None:intergenic | 35.0% |
| ! | AGTAATATTCGGTGGTTTAG+TGG | - | chr8.2:72159236-72159255 | MS.gene08488:intron | 35.0% |
| ! | CCTTCCATTTTCAAACTCAA+TGG | - | chr8.2:72161608-72161627 | MS.gene08488:CDS | 35.0% |
| ! | CTTGCCTTCTTGATTTGATT+TGG | - | chr8.2:72159893-72159912 | MS.gene08488:intron | 35.0% |
| ! | TATACTCTGCAACGGTTTTA+TGG | - | chr8.2:72159079-72159098 | MS.gene08488:intron | 35.0% |
| ! | TTTTTCTGCTTTGTGTGTGT+TGG | - | chr8.2:72158316-72158335 | MS.gene08488:intron | 35.0% |
| !! | AACTTAGTTTGTAGTTGGCT+CGG | - | chr8.2:72157884-72157903 | MS.gene08488:intron | 35.0% |
| !! | ATACTCTGCAACGGTTTTAT+GGG | - | chr8.2:72159080-72159099 | MS.gene08488:intron | 35.0% |
| !! | CAAGAGAGCATCTGAAAAAT+AGG | + | chr8.2:72160355-72160374 | None:intergenic | 35.0% |
| !! | TTGATTATTGGCTTACCTGA+AGG | - | chr8.2:72160372-72160391 | MS.gene08488:intron | 35.0% |
| !!! | ATTTTTGACTTCATCTGCAG+AGG | - | chr8.2:72160002-72160021 | MS.gene08488:intron | 35.0% |
| !!! | CACAAATCTTGTTTTACGCA+AGG | - | chr8.2:72160416-72160435 | MS.gene08488:intron | 35.0% |
| !!! | GAGTGTGGGTATCATTTTTT+AGG | + | chr8.2:72158835-72158854 | None:intergenic | 35.0% |
| !!! | TTTTTGACTTCATCTGCAGA+GGG | - | chr8.2:72160003-72160022 | MS.gene08488:intron | 35.0% |
| AAATGTGATATGCCCATGCT+AGG | - | chr8.2:72161028-72161047 | MS.gene08488:intron | 40.0% | |
| AACTCAACCTCTTCATCATC+AGG | + | chr8.2:72157368-72157387 | None:intergenic | 40.0% | |
| AAGCGCAACAATGATTCAGA+CGG | - | chr8.2:72156988-72157007 | MS.gene08488:CDS | 40.0% | |
| AAGTTGTTCAACACAAGCTC+AGG | + | chr8.2:72160902-72160921 | None:intergenic | 40.0% | |
| AATCAACATGTCGATAGGAG+CGG | + | chr8.2:72158978-72158997 | None:intergenic | 40.0% | |
| AATGTACACCGACATCAATG+AGG | + | chr8.2:72160504-72160523 | None:intergenic | 40.0% | |
| AATTGACACCAACCTGAAGA+CGG | + | chr8.2:72161570-72161589 | None:intergenic | 40.0% | |
| ACAATGGCAGTAATATTCGG+TGG | - | chr8.2:72159228-72159247 | MS.gene08488:CDS | 40.0% | |
| ACATAGAAACACTGAACCAG+AGG | + | chr8.2:72161188-72161207 | None:intergenic | 40.0% | |
| ACCCATCCCTTTAAGCTTAA+AGG | - | chr8.2:72159521-72159540 | MS.gene08488:intron | 40.0% | |
| AGAAAAACCAGAACGGAAAC+AGG | - | chr8.2:72157030-72157049 | MS.gene08488:intron | 40.0% | |
| AGAAACACACCAGTAAGGAA+TGG | + | chr8.2:72158926-72158945 | None:intergenic | 40.0% | |
| AGCCGAGAAGAAAATTCGAA+AGG | - | chr8.2:72157971-72157990 | MS.gene08488:intron | 40.0% | |
| AGTCTACCACTGAGCTATAA+TGG | + | chr8.2:72161937-72161956 | None:intergenic | 40.0% | |
| AGTTGTACACACCAATCGTA+GGG | - | chr8.2:72160243-72160262 | MS.gene08488:intron | 40.0% | |
| ATATGAAGTCTCTCTGGTTG+TGG | + | chr8.2:72161338-72161357 | None:intergenic | 40.0% | |
| ATGTGTCCAATCACGTTCTT+AGG | - | chr8.2:72161446-72161465 | MS.gene08488:intron | 40.0% | |
| ATTATAGCTCAGTGGTAGAC+TGG | - | chr8.2:72161936-72161955 | MS.gene08488:CDS | 40.0% | |
| ATTTCAGTCAGACCTAGCAT+GGG | + | chr8.2:72161043-72161062 | None:intergenic | 40.0% | |
| CAACAGTTAGAGCAACTGTT+AGG | - | chr8.2:72157807-72157826 | MS.gene08488:intron | 40.0% | |
| CCGAGAAGAAAATTCGAAAG+GGG | - | chr8.2:72157973-72157992 | MS.gene08488:intron | 40.0% | |
| CTGCTTAGAAAACAACTGAC+AGG | + | chr8.2:72161073-72161092 | None:intergenic | 40.0% | |
| CTTCTTCTGATGCTTAAGCT+TGG | + | chr8.2:72157124-72157143 | None:intergenic | 40.0% | |
| CTTTGTGTGTGTTGGATTGT+TGG | - | chr8.2:72158324-72158343 | MS.gene08488:intron | 40.0% | |
| GAAAGAGGTTTGCAATGCAT+TGG | + | chr8.2:72161911-72161930 | None:intergenic | 40.0% | |
| GAGCTATAATGGCAAGAAAG+AGG | + | chr8.2:72161926-72161945 | None:intergenic | 40.0% | |
| GCATCTGAAAAATAGGAGCA+AGG | + | chr8.2:72160348-72160367 | None:intergenic | 40.0% | |
| GCCGAGAAGAAAATTCGAAA+GGG | - | chr8.2:72157972-72157991 | MS.gene08488:intron | 40.0% | |
| GGAAGAATATGAAGTCTCTC+TGG | + | chr8.2:72161344-72161363 | None:intergenic | 40.0% | |
| TAAAACAATTGCCCGTCTTC+AGG | - | chr8.2:72161555-72161574 | MS.gene08488:intron | 40.0% | |
| TAGTTGTACACACCAATCGT+AGG | - | chr8.2:72160242-72160261 | MS.gene08488:intron | 40.0% | |
| TATTTCAGTCAGACCTAGCA+TGG | + | chr8.2:72161044-72161063 | None:intergenic | 40.0% | |
| TCACTAGAAACACACCAGTA+AGG | + | chr8.2:72158931-72158950 | None:intergenic | 40.0% | |
| TCATATTCTTCCGGCATCAT+CGG | - | chr8.2:72161352-72161371 | MS.gene08488:intron | 40.0% | |
| TCTGATCTCCTCATTGATGT+CGG | - | chr8.2:72160493-72160512 | MS.gene08488:intron | 40.0% | |
| TGAAAAACGCGCTAAGTCTA+AGG | - | chr8.2:72157146-72157165 | MS.gene08488:intron | 40.0% | |
| TTAATCATCGAAGGACGGAA+CGG | + | chr8.2:72157072-72157091 | None:intergenic | 40.0% | |
| TTCTTGCCATTATAGCTCAG+TGG | - | chr8.2:72161928-72161947 | MS.gene08488:CDS | 40.0% | |
| TTTAGGAGTAAGAGTCGAGT+TGG | - | chr8.2:72159932-72159951 | MS.gene08488:intron | 40.0% | |
| ! | AAGAATTGTACCGATGATGC+CGG | + | chr8.2:72161365-72161384 | None:intergenic | 40.0% |
| ! | AATATTCGGTGGTTTAGTGG+AGG | - | chr8.2:72159239-72159258 | MS.gene08488:intron | 40.0% |
| ! | ATCAGCTTCAAGTTTGTCAG+TGG | + | chr8.2:72157640-72157659 | None:intergenic | 40.0% |
| ! | CATCATGTTTTCTTGCCTTC+TGG | - | chr8.2:72158239-72158258 | MS.gene08488:intron | 40.0% |
| ! | CCCCTTTCGAATTTTCTTCT+CGG | + | chr8.2:72157976-72157995 | None:intergenic | 40.0% |
| ! | CGCTGCCATCATTATTTTCA+AGG | + | chr8.2:72159168-72159187 | None:intergenic | 40.0% |
| ! | GATAGTTGATGCTAACGAGA+TGG | - | chr8.2:72158071-72158090 | MS.gene08488:CDS | 40.0% |
| ! | GTGAGTTTGAAATGAGCAGT+AGG | + | chr8.2:72160399-72160418 | None:intergenic | 40.0% |
| !! | AACTTTAGAGTGTCAAGTGC+AGG | + | chr8.2:72159476-72159495 | None:intergenic | 40.0% |
| !! | GAAGACGGGCAATTGTTTTA+TGG | + | chr8.2:72161555-72161574 | None:intergenic | 40.0% |
| !! | GTAGGAGAACTTTAGAGTGT+AGG | + | chr8.2:72159483-72159502 | None:intergenic | 40.0% |
| !! | TACTCTGCAACGGTTTTATG+GGG | - | chr8.2:72159081-72159100 | MS.gene08488:intron | 40.0% |
| !!! | AGTCATGCGTTTTGATTTGG+TGG | - | chr8.2:72157934-72157953 | MS.gene08488:intron | 40.0% |
| !!! | CTGACTGCTTTTTATCCACA+CGG | + | chr8.2:72160136-72160155 | None:intergenic | 40.0% |
| !!! | GTCATGCGTTTTGATTTGGT+GGG | - | chr8.2:72157935-72157954 | MS.gene08488:intron | 40.0% |
| !!! | TTCCGTTCTGGTTTTTCTCT+TGG | + | chr8.2:72157028-72157047 | None:intergenic | 40.0% |
| !!! | TTTTGACTTCATCTGCAGAG+GGG | - | chr8.2:72160004-72160023 | MS.gene08488:intron | 40.0% |
| AAATGAGCAGTAGGTCCTTC+AGG | + | chr8.2:72160390-72160409 | None:intergenic | 45.0% | |
| AACAACTTCACAACACGCCT+AGG | - | chr8.2:72160914-72160933 | MS.gene08488:intron | 45.0% | |
| AACCAGAACGGAAACAGGAA+CGG | - | chr8.2:72157035-72157054 | MS.gene08488:intron | 45.0% | |
| AACTAGACTGCTCTAACAGC+TGG | + | chr8.2:72158771-72158790 | None:intergenic | 45.0% | |
| AAGCTTAAAGGGATGGGTGT+AGG | + | chr8.2:72159519-72159538 | None:intergenic | 45.0% | |
| ACAACTTCACAACACGCCTA+GGG | - | chr8.2:72160915-72160934 | MS.gene08488:intron | 45.0% | |
| ACTAGACTGCTCTAACAGCT+GGG | + | chr8.2:72158770-72158789 | None:intergenic | 45.0% | |
| ATGGCAGCGCTAGATATTTG+GGG | - | chr8.2:72159179-72159198 | MS.gene08488:CDS | 45.0% | |
| ATTGACACCAACCTGAAGAC+GGG | + | chr8.2:72161569-72161588 | None:intergenic | 45.0% | |
| CAGTGTTAAGTCACAAAGGG+AGG | - | chr8.2:72159317-72159336 | MS.gene08488:intron | 45.0% | |
| CCCAAGATCCCGAGTTTAAA+GGG | - | chr8.2:72161295-72161314 | MS.gene08488:intron | 45.0% | |
| CCCTTTAAACTCGGGATCTT+GGG | + | chr8.2:72161298-72161317 | None:intergenic | 45.0% | |
| CCTTTAAACTCGGGATCTTG+GGG | + | chr8.2:72161297-72161316 | None:intergenic | 45.0% | |
| CGTGTGTTTCCATTCCTTAC+TGG | - | chr8.2:72158914-72158933 | MS.gene08488:CDS | 45.0% | |
| CTTTAAACTCGGGATCTTGG+GGG | + | chr8.2:72161296-72161315 | None:intergenic | 45.0% | |
| GATGGCAGCGCTAGATATTT+GGG | - | chr8.2:72159178-72159197 | MS.gene08488:CDS | 45.0% | |
| GCTATGATGACTCGTGCAAA+CGG | + | chr8.2:72158196-72158215 | None:intergenic | 45.0% | |
| GTGTGTTGGATTGTTGGTGT+GGG | - | chr8.2:72158330-72158349 | MS.gene08488:intron | 45.0% | |
| TAATCATCGAAGGACGGAAC+GGG | + | chr8.2:72157071-72157090 | None:intergenic | 45.0% | |
| TACACGTCGCCCTTTAAACT+CGG | + | chr8.2:72161307-72161326 | None:intergenic | 45.0% | |
| TCACTATCTCTTTCACCGTG+TGG | - | chr8.2:72160118-72160137 | MS.gene08488:intron | 45.0% | |
| TCATGCTAACATGTGCCCTA+CGG | + | chr8.2:72158586-72158605 | None:intergenic | 45.0% | |
| TGATGGCAGCGCTAGATATT+TGG | - | chr8.2:72159177-72159196 | MS.gene08488:CDS | 45.0% | |
| TGTGTGTTGGATTGTTGGTG+TGG | - | chr8.2:72158329-72158348 | MS.gene08488:intron | 45.0% | |
| TGTGTTGGATTGTTGGTGTG+GGG | - | chr8.2:72158331-72158350 | MS.gene08488:intron | 45.0% | |
| TTGCAGGTACTCAAAACCTG+AGG | + | chr8.2:72161983-72162002 | None:intergenic | 45.0% | |
| ! | CACTTGCCGCTTCAATTCTA+CGG | - | chr8.2:72159801-72159820 | MS.gene08488:intron | 45.0% |
| ! | TGCCCTTAGAGCACTAGTTA+AGG | - | chr8.2:72157860-72157879 | MS.gene08488:intron | 45.0% |
| ! | TTCATGGTGGAAGAGAGTGT+GGG | + | chr8.2:72158849-72158868 | None:intergenic | 45.0% |
| ! | TTGCAAGCCTGATGATGAAG+AGG | - | chr8.2:72157358-72157377 | MS.gene08488:intron | 45.0% |
| ! | TTGTGTGTTGTTGTAGCCTC+CGG | - | chr8.2:72157283-72157302 | MS.gene08488:intron | 45.0% |
| ! | TTTCATGGTGGAAGAGAGTG+TGG | + | chr8.2:72158850-72158869 | None:intergenic | 45.0% |
| !! | CGGGCAATTGTTTTATGGTC+AGG | + | chr8.2:72161550-72161569 | None:intergenic | 45.0% |
| !! | TTGCTTAAAGAGTGCCCGTA+GGG | - | chr8.2:72158568-72158587 | MS.gene08488:CDS | 45.0% |
| !!! | TAGTTGGCTCGGTTTTGCAT+TGG | - | chr8.2:72157895-72157914 | MS.gene08488:intron | 45.0% |
| !! | AATAAATAATAATTAGTTAA+AGG | + | chr8.2:72158610-72158629 | None:intergenic | 5.0% |
| !! | ATAAATAATAATTAGTTAAA+GGG | + | chr8.2:72158609-72158628 | None:intergenic | 5.0% |
| ACAATTGCCCGTCTTCAGGT+TGG | - | chr8.2:72161559-72161578 | MS.gene08488:intron | 50.0% | |
| ACACGTCGCCCTTTAAACTC+GGG | + | chr8.2:72161306-72161325 | None:intergenic | 50.0% | |
| ATAGCTGTTGTGTGAGCTGC+AGG | - | chr8.2:72158211-72158230 | MS.gene08488:intron | 50.0% | |
| ATCGTAGGGAACCAAGTAGG+TGG | - | chr8.2:72160257-72160276 | MS.gene08488:intron | 50.0% | |
| CAGTGGTAGACTGGTAGTCT+TGG | - | chr8.2:72161945-72161964 | MS.gene08488:CDS | 50.0% | |
| CATGCTAACATGTGCCCTAC+GGG | + | chr8.2:72158585-72158604 | None:intergenic | 50.0% | |
| CCAATCGTAGGGAACCAAGT+AGG | - | chr8.2:72160254-72160273 | MS.gene08488:intron | 50.0% | |
| CCCCAAGATCCCGAGTTTAA+AGG | - | chr8.2:72161294-72161313 | MS.gene08488:intron | 50.0% | |
| CCTACTTGGTTCCCTACGAT+TGG | + | chr8.2:72160257-72160276 | None:intergenic | 50.0% | |
| CGTAGAATTGAAGCGGCAAG+TGG | + | chr8.2:72159803-72159822 | None:intergenic | 50.0% | |
| CTAGACTGCTCTAACAGCTG+GGG | + | chr8.2:72158769-72158788 | None:intergenic | 50.0% | |
| GAAGTCTCTCTGGTTGTGGA+AGG | + | chr8.2:72161334-72161353 | None:intergenic | 50.0% | |
| GATGCTAACGAGATGGTCGA+TGG | - | chr8.2:72158078-72158097 | MS.gene08488:CDS | 50.0% | |
| GCCCTTTAAACTCGGGATCT+TGG | + | chr8.2:72161299-72161318 | None:intergenic | 50.0% | |
| GGAAACAGGAACGGAAACGA+AGG | - | chr8.2:72157044-72157063 | MS.gene08488:intron | 50.0% | |
| GGACTCCATGATTCTGCAAG+GGG | + | chr8.2:72160865-72160884 | None:intergenic | 50.0% | |
| GGGACTCCATGATTCTGCAA+GGG | + | chr8.2:72160866-72160885 | None:intergenic | 50.0% | |
| GGTCGATGGAGATGTAGTCT+TGG | - | chr8.2:72158092-72158111 | MS.gene08488:intron | 50.0% | |
| TGGGACTCCATGATTCTGCA+AGG | + | chr8.2:72160867-72160886 | None:intergenic | 50.0% | |
| TGGGGATCTGTTGGATACAG+CGG | - | chr8.2:72158349-72158368 | MS.gene08488:intron | 50.0% | |
| TGTGTCCCCTTGCAGAATCA+TGG | - | chr8.2:72160857-72160876 | MS.gene08488:intron | 50.0% | |
| TGTTCAACACAAGCTCAGGC+TGG | + | chr8.2:72160898-72160917 | None:intergenic | 50.0% | |
| TTCCGTTCCTGTTTCCGTTC+TGG | + | chr8.2:72157040-72157059 | None:intergenic | 50.0% | |
| TTGTTGGTGTGGGGATCTGT+TGG | - | chr8.2:72158340-72158359 | MS.gene08488:intron | 50.0% | |
| ! | CTGATTTGTGCGCGCATGTA+CGG | - | chr8.2:72158434-72158453 | MS.gene08488:intron | 50.0% |
| ! | TGGTAGACTGGTAGTCTTGG+TGG | - | chr8.2:72161948-72161967 | MS.gene08488:CDS | 50.0% |
| ! | TTGGTGGATGCAGTATCCTC+AGG | - | chr8.2:72161964-72161983 | MS.gene08488:CDS | 50.0% |
| !! | ACTCAAAGGCACCACCTACT+TGG | + | chr8.2:72160271-72160290 | None:intergenic | 50.0% |
| !! | AGGAGTAAGAGTCGAGTTGG+AGG | - | chr8.2:72159935-72159954 | MS.gene08488:intron | 50.0% |
| !! | CTTGCTTAAAGAGTGCCCGT+AGG | - | chr8.2:72158567-72158586 | MS.gene08488:CDS | 50.0% |
| !!! | GAAAGGGGTTTTGGCTCGTA+TGG | - | chr8.2:72157988-72158007 | MS.gene08488:intron | 50.0% |
| ACCTTCCAACTCGATGCCCT+AGG | + | chr8.2:72160934-72160953 | None:intergenic | 55.0% | |
| AGCTATTGAGCTCGGCGAAG+AGG | - | chr8.2:72157191-72157210 | MS.gene08488:intron | 55.0% | |
| CTGTTGTGTGAGCTGCAGGT+CGG | - | chr8.2:72158215-72158234 | MS.gene08488:intron | 55.0% | |
| GTCTTCGGCACCTTCTTCTC+CGG | + | chr8.2:72157305-72157324 | None:intergenic | 55.0% | |
| GTTGTAGCCTCCGGAGAAGA+AGG | - | chr8.2:72157292-72157311 | MS.gene08488:intron | 55.0% | |
| !! | TGATGCTAGGTGTCGCTCAG+AGG | - | chr8.2:72157542-72157561 | MS.gene08488:intron | 55.0% |
| AGCTCAGGCTGGTGACTGGT+TGG | + | chr8.2:72160887-72160906 | None:intergenic | 60.0% | |
| CACAAGCTCAGGCTGGTGAC+TGG | + | chr8.2:72160891-72160910 | None:intergenic | 60.0% | |
| CAGCAGTACCACTGCACCAG+AGG | + | chr8.2:72158269-72158288 | None:intergenic | 60.0% | |
| CTTGCCTTCTGGTCTGCCTC+TGG | - | chr8.2:72158250-72158269 | MS.gene08488:intron | 60.0% | |
| GACTGCTCTAACAGCTGGGG+AGG | + | chr8.2:72158766-72158785 | None:intergenic | 60.0% | |
| TGCACCAGAGGCAGACCAGA+AGG | + | chr8.2:72158257-72158276 | None:intergenic | 60.0% | |
| TTCGGCACCTTCTTCTCCGG+AGG | + | chr8.2:72157302-72157321 | None:intergenic | 60.0% | |
| ! | GCTCAGGCTGGTGACTGGTT+GGG | + | chr8.2:72160886-72160905 | None:intergenic | 60.0% |
| !! | ACACGCCTAGGGCATCGAGT+TGG | - | chr8.2:72160926-72160945 | MS.gene08488:intron | 60.0% |
| !! | CTAGGTGTCGCTCAGAGGCA+CGG | - | chr8.2:72157547-72157566 | MS.gene08488:intron | 60.0% |
| !! | GCCTAGGGCATCGAGTTGGA+AGG | - | chr8.2:72160930-72160949 | MS.gene08488:intron | 60.0% |
| !! | TAGGTGTCGCTCAGAGGCAC+GGG | - | chr8.2:72157548-72157567 | MS.gene08488:intron | 60.0% |
| CTGGTCTGCCTCTGGTGCAG+TGG | - | chr8.2:72158258-72158277 | MS.gene08488:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 72156967 | 72162008 | 72156967 | ID=MS.gene08488 |
| chr8.2 | mRNA | 72156967 | 72162008 | 72156967 | ID=MS.gene08488.t1;Parent=MS.gene08488 |
| chr8.2 | exon | 72161763 | 72162008 | 72161763 | ID=MS.gene08488.t1.exon1;Parent=MS.gene08488.t1 |
| chr8.2 | CDS | 72161763 | 72162008 | 72161763 | ID=cds.MS.gene08488.t1;Parent=MS.gene08488.t1 |
| chr8.2 | exon | 72161596 | 72161676 | 72161596 | ID=MS.gene08488.t1.exon2;Parent=MS.gene08488.t1 |
| chr8.2 | CDS | 72161596 | 72161676 | 72161596 | ID=cds.MS.gene08488.t1;Parent=MS.gene08488.t1 |
| chr8.2 | exon | 72159153 | 72159248 | 72159153 | ID=MS.gene08488.t1.exon3;Parent=MS.gene08488.t1 |
| chr8.2 | CDS | 72159153 | 72159248 | 72159153 | ID=cds.MS.gene08488.t1;Parent=MS.gene08488.t1 |
| chr8.2 | exon | 72158870 | 72158953 | 72158870 | ID=MS.gene08488.t1.exon4;Parent=MS.gene08488.t1 |
| chr8.2 | CDS | 72158870 | 72158953 | 72158870 | ID=cds.MS.gene08488.t1;Parent=MS.gene08488.t1 |
| chr8.2 | exon | 72158704 | 72158773 | 72158704 | ID=MS.gene08488.t1.exon5;Parent=MS.gene08488.t1 |
| chr8.2 | CDS | 72158704 | 72158773 | 72158704 | ID=cds.MS.gene08488.t1;Parent=MS.gene08488.t1 |
| chr8.2 | exon | 72158529 | 72158611 | 72158529 | ID=MS.gene08488.t1.exon6;Parent=MS.gene08488.t1 |
| chr8.2 | CDS | 72158529 | 72158611 | 72158529 | ID=cds.MS.gene08488.t1;Parent=MS.gene08488.t1 |
| chr8.2 | exon | 72158024 | 72158103 | 72158024 | ID=MS.gene08488.t1.exon7;Parent=MS.gene08488.t1 |
| chr8.2 | CDS | 72158024 | 72158103 | 72158024 | ID=cds.MS.gene08488.t1;Parent=MS.gene08488.t1 |
| chr8.2 | exon | 72157602 | 72157700 | 72157602 | ID=MS.gene08488.t1.exon8;Parent=MS.gene08488.t1 |
| chr8.2 | CDS | 72157602 | 72157700 | 72157602 | ID=cds.MS.gene08488.t1;Parent=MS.gene08488.t1 |
| chr8.2 | exon | 72157399 | 72157507 | 72157399 | ID=MS.gene08488.t1.exon9;Parent=MS.gene08488.t1 |
| chr8.2 | CDS | 72157399 | 72157507 | 72157399 | ID=cds.MS.gene08488.t1;Parent=MS.gene08488.t1 |
| chr8.2 | exon | 72156967 | 72157032 | 72156967 | ID=MS.gene08488.t1.exon10;Parent=MS.gene08488.t1 |
| chr8.2 | CDS | 72156967 | 72157032 | 72156967 | ID=cds.MS.gene08488.t1;Parent=MS.gene08488.t1 |
| Gene Sequence |
| Protein sequence |
