Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41950.t1 | KEH26169.1 | 97.9 | 474 | 10 | 0 | 1 | 474 | 1 | 474 | 5.20E-245 | 856.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41950.t1 | Q9FF86 | 61.7 | 473 | 143 | 5 | 12 | 471 | 1 | 448 | 5.8e-160 | 565.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41950.t1 | A0A072U8R0 | 97.9 | 474 | 10 | 0 | 1 | 474 | 1 | 474 | 3.7e-245 | 856.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049260 | MS.gene41950 | 0.800636 | 1.31E-48 | -1.69E-46 |
| MS.gene049351 | MS.gene41950 | 0.806326 | 8.68E-50 | -1.69E-46 |
| MS.gene049491 | MS.gene41950 | 0.813223 | 2.85E-51 | -1.69E-46 |
| MS.gene049758 | MS.gene41950 | 0.809526 | 1.81E-50 | -1.69E-46 |
| MS.gene049907 | MS.gene41950 | 0.803999 | 2.67E-49 | -1.69E-46 |
| MS.gene050076 | MS.gene41950 | 0.800182 | 1.63E-48 | -1.69E-46 |
| MS.gene050099 | MS.gene41950 | 0.830287 | 3.20E-55 | -1.69E-46 |
| MS.gene050128 | MS.gene41950 | 0.874104 | 8.76E-68 | -1.69E-46 |
| MS.gene050301 | MS.gene41950 | 0.828207 | 1.02E-54 | -1.69E-46 |
| MS.gene050581 | MS.gene41950 | 0.860571 | 1.88E-63 | -1.69E-46 |
| MS.gene050767 | MS.gene41950 | 0.810897 | 9.17E-51 | -1.69E-46 |
| MS.gene050770 | MS.gene41950 | 0.807928 | 3.98E-50 | -1.69E-46 |
| MS.gene05101 | MS.gene41950 | 0.830651 | 2.60E-55 | -1.69E-46 |
| MS.gene051255 | MS.gene41950 | 0.830049 | 3.66E-55 | -1.69E-46 |
| MS.gene051471 | MS.gene41950 | 0.813838 | 2.09E-51 | -1.69E-46 |
| MS.gene052078 | MS.gene41950 | 0.83228 | 1.03E-55 | -1.69E-46 |
| MS.gene052178 | MS.gene41950 | 0.871989 | 4.49E-67 | -1.69E-46 |
| MS.gene052287 | MS.gene41950 | 0.800393 | 1.47E-48 | -1.69E-46 |
| MS.gene052310 | MS.gene41950 | 0.806386 | 8.44E-50 | -1.69E-46 |
| MS.gene052326 | MS.gene41950 | 0.842025 | 3.33E-58 | -1.69E-46 |
| MS.gene052340 | MS.gene41950 | 0.805012 | 1.64E-49 | -1.69E-46 |
| MS.gene053557 | MS.gene41950 | 0.809429 | 1.90E-50 | -1.69E-46 |
| MS.gene053813 | MS.gene41950 | 0.842463 | 2.55E-58 | -1.69E-46 |
| MS.gene053836 | MS.gene41950 | 0.805428 | 1.34E-49 | -1.69E-46 |
| MS.gene054010 | MS.gene41950 | 0.836605 | 8.49E-57 | -1.69E-46 |
| MS.gene054011 | MS.gene41950 | 0.822957 | 1.79E-53 | -1.69E-46 |
| MS.gene054012 | MS.gene41950 | 0.832708 | 8.10E-56 | -1.69E-46 |
| MS.gene054013 | MS.gene41950 | 0.836171 | 1.09E-56 | -1.69E-46 |
| MS.gene054214 | MS.gene41950 | 0.870352 | 1.56E-66 | -1.69E-46 |
| MS.gene054376 | MS.gene41950 | 0.829695 | 4.46E-55 | -1.69E-46 |
| MS.gene05455 | MS.gene41950 | 0.813277 | 2.78E-51 | -1.69E-46 |
| MS.gene055277 | MS.gene41950 | 0.85733 | 1.76E-62 | -1.69E-46 |
| MS.gene055390 | MS.gene41950 | 0.839379 | 1.64E-57 | -1.69E-46 |
| MS.gene055422 | MS.gene41950 | 0.822752 | 2.00E-53 | -1.69E-46 |
| MS.gene055428 | MS.gene41950 | 0.822744 | 2.01E-53 | -1.69E-46 |
| MS.gene055604 | MS.gene41950 | 0.834569 | 2.78E-56 | -1.69E-46 |
| MS.gene056191 | MS.gene41950 | 0.845136 | 4.90E-59 | -1.69E-46 |
| MS.gene056306 | MS.gene41950 | 0.801583 | 8.41E-49 | -1.69E-46 |
| MS.gene056410 | MS.gene41950 | 0.821348 | 4.24E-53 | -1.69E-46 |
| MS.gene056902 | MS.gene41950 | 0.824331 | 8.55E-54 | -1.69E-46 |
| MS.gene056931 | MS.gene41950 | 0.845584 | 3.71E-59 | -1.69E-46 |
| MS.gene056933 | MS.gene41950 | 0.84577 | 3.30E-59 | -1.69E-46 |
| MS.gene056935 | MS.gene41950 | 0.827691 | 1.36E-54 | -1.69E-46 |
| MS.gene05702 | MS.gene41950 | 0.801679 | 8.04E-49 | -1.69E-46 |
| MS.gene057450 | MS.gene41950 | 0.805212 | 1.49E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene41950 | 0.815289 | 9.98E-52 | -1.69E-46 |
| MS.gene05811 | MS.gene41950 | 0.832849 | 7.48E-56 | -1.69E-46 |
| MS.gene058293 | MS.gene41950 | 0.804682 | 1.92E-49 | -1.69E-46 |
| MS.gene058660 | MS.gene41950 | 0.834446 | 2.98E-56 | -1.69E-46 |
| MS.gene058903 | MS.gene41950 | 0.903573 | 3.02E-79 | -1.69E-46 |
| MS.gene05907 | MS.gene41950 | 0.830511 | 2.82E-55 | -1.69E-46 |
| MS.gene059228 | MS.gene41950 | 0.851829 | 6.88E-61 | -1.69E-46 |
| MS.gene059294 | MS.gene41950 | 0.852855 | 3.51E-61 | -1.69E-46 |
| MS.gene059518 | MS.gene41950 | 0.810784 | 9.70E-51 | -1.69E-46 |
| MS.gene059597 | MS.gene41950 | 0.803907 | 2.79E-49 | -1.69E-46 |
| MS.gene059676 | MS.gene41950 | 0.802852 | 4.61E-49 | -1.69E-46 |
| MS.gene059692 | MS.gene41950 | 0.804336 | 2.27E-49 | -1.69E-46 |
| MS.gene059695 | MS.gene41950 | 0.801379 | 9.26E-49 | -1.69E-46 |
| MS.gene059894 | MS.gene41950 | 0.824906 | 6.26E-54 | -1.69E-46 |
| MS.gene059974 | MS.gene41950 | 0.906929 | 8.77E-81 | -1.69E-46 |
| MS.gene060005 | MS.gene41950 | 0.967917 | 6.07E-128 | -1.69E-46 |
| MS.gene06037 | MS.gene41950 | 0.855785 | 5.00E-62 | -1.69E-46 |
| MS.gene060559 | MS.gene41950 | 0.840439 | 8.69E-58 | -1.69E-46 |
| MS.gene060799 | MS.gene41950 | 0.841802 | 3.81E-58 | -1.69E-46 |
| MS.gene060800 | MS.gene41950 | 0.866685 | 2.38E-65 | -1.69E-46 |
| MS.gene060801 | MS.gene41950 | 0.84619 | 2.54E-59 | -1.69E-46 |
| MS.gene061049 | MS.gene41950 | 0.813909 | 2.02E-51 | -1.69E-46 |
| MS.gene061051 | MS.gene41950 | -0.80314 | 4.02E-49 | -1.69E-46 |
| MS.gene061112 | MS.gene41950 | 0.850654 | 1.48E-60 | -1.69E-46 |
| MS.gene061265 | MS.gene41950 | 0.848356 | 6.46E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene069321 | MS.gene41950 | PPI |
| MS.gene41950 | MS.gene38699 | PPI |
| MS.gene32934 | MS.gene41950 | PPI |
| MS.gene41950 | MS.gene012959 | PPI |
| MS.gene012960 | MS.gene41950 | PPI |
| MS.gene38704 | MS.gene41950 | PPI |
| MS.gene012957 | MS.gene41950 | PPI |
| MS.gene38361 | MS.gene41950 | PPI |
| MS.gene38701 | MS.gene41950 | PPI |
| MS.gene41950 | MS.gene38702 | PPI |
| MS.gene046246 | MS.gene41950 | PPI |
| MS.gene38700 | MS.gene41950 | PPI |
| MS.gene38365 | MS.gene41950 | PPI |
| MS.gene012965 | MS.gene41950 | PPI |
| MS.gene41950 | MS.gene012961 | PPI |
| MS.gene95242 | MS.gene41950 | PPI |
| MS.gene32936 | MS.gene41950 | PPI |
| MS.gene32938 | MS.gene41950 | PPI |
| MS.gene41950 | MS.gene38359 | PPI |
| MS.gene41950 | MS.gene38703 | PPI |
| MS.gene41950 | MS.gene039597 | PPI |
| MS.gene38363 | MS.gene41950 | PPI |
| MS.gene41950 | MS.gene32933 | PPI |
| MS.gene41950 | MS.gene38706 | PPI |
| MS.gene38362 | MS.gene41950 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41950.t1 | MTR_6g045553 | 97.046 | 474 | 14 | 0 | 1 | 474 | 1 | 474 | 0.0 | 942 |
| MS.gene41950.t1 | MTR_5g081960 | 31.189 | 513 | 258 | 11 | 16 | 471 | 8 | 482 | 8.97e-77 | 248 |
| MS.gene41950.t1 | MTR_4g015180 | 33.063 | 493 | 292 | 10 | 11 | 474 | 3 | 486 | 7.47e-75 | 243 |
| MS.gene41950.t1 | MTR_3g070170 | 30.321 | 498 | 276 | 8 | 8 | 471 | 6 | 466 | 8.54e-71 | 232 |
| MS.gene41950.t1 | MTR_3g102020 | 32.988 | 482 | 269 | 13 | 8 | 471 | 2 | 447 | 1.13e-63 | 213 |
| MS.gene41950.t1 | MTR_3g101900 | 30.252 | 476 | 282 | 11 | 14 | 474 | 7 | 447 | 1.12e-62 | 210 |
| MS.gene41950.t1 | MTR_3g102010 | 31.224 | 474 | 283 | 11 | 14 | 474 | 7 | 450 | 1.17e-59 | 202 |
| MS.gene41950.t1 | MTR_4g094842 | 31.237 | 477 | 273 | 12 | 14 | 471 | 4 | 444 | 5.00e-59 | 201 |
| MS.gene41950.t1 | MTR_4g022825 | 30.905 | 453 | 273 | 12 | 27 | 471 | 16 | 436 | 9.03e-59 | 200 |
| MS.gene41950.t1 | MTR_3g101970 | 30.833 | 480 | 266 | 12 | 13 | 474 | 5 | 436 | 2.06e-58 | 199 |
| MS.gene41950.t1 | MTR_3g101960 | 30.625 | 480 | 272 | 12 | 13 | 470 | 5 | 445 | 5.27e-58 | 198 |
| MS.gene41950.t1 | MTR_0190s0020 | 30.425 | 447 | 266 | 10 | 34 | 471 | 28 | 438 | 4.02e-56 | 193 |
| MS.gene41950.t1 | MTR_4g022800 | 30.407 | 467 | 284 | 12 | 14 | 471 | 4 | 438 | 7.24e-55 | 189 |
| MS.gene41950.t1 | MTR_8g041770 | 30.717 | 446 | 262 | 11 | 35 | 471 | 30 | 437 | 9.44e-53 | 184 |
| MS.gene41950.t1 | MTR_3g101930 | 28.778 | 483 | 281 | 11 | 14 | 471 | 7 | 451 | 3.91e-52 | 182 |
| MS.gene41950.t1 | MTR_4g022670 | 28.970 | 466 | 291 | 12 | 14 | 471 | 4 | 437 | 1.65e-50 | 178 |
| MS.gene41950.t1 | MTR_3g088420 | 30.512 | 449 | 265 | 11 | 31 | 471 | 20 | 429 | 1.98e-50 | 177 |
| MS.gene41950.t1 | MTR_4g094835 | 29.688 | 448 | 269 | 11 | 35 | 472 | 32 | 443 | 2.22e-49 | 175 |
| MS.gene41950.t1 | MTR_4g022720 | 29.598 | 473 | 273 | 14 | 14 | 471 | 4 | 431 | 7.73e-49 | 173 |
| MS.gene41950.t1 | MTR_3g026310 | 29.701 | 468 | 292 | 12 | 14 | 471 | 4 | 444 | 8.94e-49 | 173 |
| MS.gene41950.t1 | MTR_4g094832 | 32.540 | 378 | 211 | 10 | 101 | 472 | 88 | 427 | 1.23e-48 | 172 |
| MS.gene41950.t1 | MTR_7g026860 | 29.025 | 472 | 280 | 13 | 14 | 471 | 4 | 434 | 2.16e-47 | 169 |
| MS.gene41950.t1 | MTR_4g094838 | 29.167 | 456 | 253 | 13 | 34 | 472 | 27 | 429 | 1.22e-44 | 162 |
| MS.gene41950.t1 | MTR_4g094828 | 30.926 | 443 | 260 | 13 | 35 | 462 | 29 | 440 | 2.52e-44 | 161 |
| MS.gene41950.t1 | MTR_8g075610 | 27.660 | 470 | 272 | 21 | 22 | 474 | 2 | 420 | 7.40e-40 | 149 |
| MS.gene41950.t1 | MTR_4g007540 | 26.349 | 482 | 283 | 18 | 14 | 474 | 3 | 433 | 2.30e-39 | 147 |
| MS.gene41950.t1 | MTR_4g022290 | 28.182 | 440 | 263 | 10 | 31 | 456 | 26 | 426 | 2.68e-38 | 145 |
| MS.gene41950.t1 | MTR_4g022760 | 28.173 | 394 | 233 | 10 | 13 | 392 | 3 | 360 | 5.90e-36 | 137 |
| MS.gene41950.t1 | MTR_8g079710 | 29.526 | 464 | 265 | 18 | 14 | 456 | 4 | 426 | 3.02e-35 | 136 |
| MS.gene41950.t1 | MTR_4g097090 | 28.329 | 413 | 239 | 10 | 66 | 457 | 65 | 441 | 2.38e-34 | 134 |
| MS.gene41950.t1 | MTR_2g064495 | 24.684 | 474 | 287 | 16 | 14 | 466 | 3 | 427 | 2.92e-33 | 130 |
| MS.gene41950.t1 | MTR_2g105330 | 24.520 | 469 | 294 | 16 | 14 | 466 | 3 | 427 | 8.39e-32 | 126 |
| MS.gene41950.t1 | MTR_3g102030 | 28.247 | 308 | 154 | 6 | 126 | 428 | 75 | 320 | 4.32e-29 | 117 |
| MS.gene41950.t1 | MTR_4g127650 | 26.859 | 417 | 247 | 12 | 66 | 461 | 66 | 445 | 9.65e-29 | 118 |
| MS.gene41950.t1 | MTR_3g026950 | 26.835 | 436 | 259 | 15 | 14 | 423 | 2 | 403 | 9.66e-29 | 118 |
| MS.gene41950.t1 | MTR_8g096530 | 27.158 | 475 | 285 | 18 | 12 | 473 | 5 | 431 | 2.87e-27 | 114 |
| MS.gene41950.t1 | MTR_6g016815 | 26.014 | 419 | 225 | 10 | 14 | 428 | 18 | 355 | 4.02e-27 | 112 |
| MS.gene41950.t1 | MTR_3g098980 | 27.311 | 476 | 290 | 17 | 1 | 466 | 1 | 430 | 1.57e-26 | 111 |
| MS.gene41950.t1 | MTR_6g015815 | 27.494 | 451 | 268 | 19 | 35 | 461 | 34 | 449 | 2.90e-24 | 105 |
| MS.gene41950.t1 | MTR_8g040780 | 29.864 | 221 | 147 | 5 | 256 | 472 | 13 | 229 | 7.49e-24 | 100 |
| MS.gene41950.t1 | MTR_7g014200 | 26.742 | 445 | 266 | 17 | 13 | 426 | 8 | 423 | 2.42e-23 | 102 |
| MS.gene41950.t1 | MTR_3g049150 | 25.404 | 433 | 267 | 15 | 51 | 461 | 38 | 436 | 1.83e-22 | 100 |
| MS.gene41950.t1 | MTR_7g086000 | 24.324 | 481 | 307 | 17 | 12 | 466 | 2 | 451 | 3.30e-22 | 99.4 |
| MS.gene41950.t1 | MTR_7g014160 | 26.273 | 491 | 286 | 21 | 13 | 462 | 8 | 463 | 1.35e-21 | 97.8 |
| MS.gene41950.t1 | MTR_6g015850 | 26.419 | 458 | 261 | 21 | 35 | 461 | 34 | 446 | 7.35e-21 | 95.5 |
| MS.gene41950.t1 | MTR_7g026850 | 34.694 | 147 | 79 | 2 | 48 | 184 | 20 | 159 | 8.15e-21 | 90.1 |
| MS.gene41950.t1 | MTR_6g015830 | 25.771 | 454 | 272 | 17 | 35 | 461 | 34 | 449 | 1.37e-20 | 94.7 |
| MS.gene41950.t1 | MTR_1g081660 | 26.126 | 333 | 205 | 8 | 39 | 369 | 51 | 344 | 1.53e-20 | 94.4 |
| MS.gene41950.t1 | MTR_6g034495 | 40.870 | 115 | 62 | 2 | 77 | 185 | 45 | 159 | 1.80e-19 | 85.9 |
| MS.gene41950.t1 | MTR_4g094825 | 37.013 | 154 | 85 | 4 | 322 | 474 | 248 | 390 | 2.73e-19 | 90.1 |
| MS.gene41950.t1 | MTR_4g094825 | 35.294 | 85 | 54 | 1 | 101 | 184 | 164 | 248 | 4.45e-11 | 65.1 |
| MS.gene41950.t1 | MTR_2g089765 | 24.845 | 483 | 309 | 17 | 6 | 457 | 8 | 467 | 1.76e-18 | 88.2 |
| MS.gene41950.t1 | MTR_6g015320 | 25.910 | 467 | 296 | 20 | 14 | 461 | 8 | 443 | 5.30e-18 | 86.7 |
| MS.gene41950.t1 | MTR_7g027175 | 25.567 | 485 | 283 | 21 | 10 | 474 | 11 | 437 | 6.16e-18 | 86.3 |
| MS.gene41950.t1 | MTR_8g040760 | 32.948 | 173 | 109 | 4 | 34 | 199 | 26 | 198 | 5.13e-17 | 80.5 |
| MS.gene41950.t1 | MTR_3g028210 | 24.105 | 419 | 257 | 16 | 35 | 424 | 31 | 417 | 2.19e-15 | 78.6 |
| MS.gene41950.t1 | MTR_1g053315 | 24.378 | 402 | 239 | 22 | 44 | 423 | 51 | 409 | 8.14e-15 | 77.0 |
| MS.gene41950.t1 | MTR_7g084940 | 24.439 | 446 | 275 | 19 | 12 | 443 | 14 | 411 | 1.79e-14 | 75.9 |
| MS.gene41950.t1 | MTR_7g084910 | 25.664 | 339 | 212 | 12 | 10 | 341 | 13 | 318 | 2.04e-14 | 75.5 |
| MS.gene41950.t1 | MTR_1g040175 | 23.958 | 384 | 215 | 14 | 60 | 422 | 58 | 385 | 3.70e-14 | 74.7 |
| MS.gene41950.t1 | MTR_3g049140 | 24.402 | 209 | 140 | 4 | 264 | 457 | 26 | 231 | 1.23e-11 | 65.1 |
| MS.gene41950.t1 | MTR_4g013050 | 28.646 | 192 | 107 | 6 | 292 | 461 | 216 | 399 | 2.20e-11 | 65.9 |
| MS.gene41950.t1 | MTR_2g015430 | 23.514 | 370 | 233 | 14 | 66 | 426 | 58 | 386 | 8.11e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41950.t1 | AT5G23940 | 62.236 | 474 | 141 | 6 | 12 | 472 | 1 | 449 | 0.0 | 593 |
| MS.gene41950.t1 | AT2G39980 | 30.980 | 510 | 267 | 9 | 13 | 474 | 7 | 479 | 7.40e-74 | 241 |
| MS.gene41950.t1 | AT5G01210 | 32.207 | 503 | 265 | 7 | 11 | 474 | 3 | 468 | 2.65e-73 | 239 |
| MS.gene41950.t1 | AT5G42830 | 33.624 | 458 | 261 | 13 | 24 | 471 | 21 | 445 | 9.30e-65 | 216 |
| MS.gene41950.t1 | AT5G07860 | 30.480 | 479 | 271 | 12 | 14 | 471 | 8 | 445 | 4.65e-59 | 201 |
| MS.gene41950.t1 | AT5G07870 | 30.498 | 482 | 291 | 9 | 8 | 471 | 2 | 457 | 6.63e-59 | 201 |
| MS.gene41950.t1 | AT5G67150 | 30.867 | 473 | 283 | 11 | 14 | 474 | 5 | 445 | 5.26e-58 | 198 |
| MS.gene41950.t1 | AT3G50270 | 29.193 | 483 | 279 | 12 | 14 | 474 | 6 | 447 | 2.78e-56 | 194 |
| MS.gene41950.t1 | AT3G50280 | 30.083 | 482 | 269 | 16 | 13 | 471 | 3 | 439 | 5.47e-56 | 192 |
| MS.gene41950.t1 | AT5G07850 | 30.928 | 485 | 283 | 17 | 8 | 474 | 2 | 452 | 7.88e-55 | 190 |
| MS.gene41950.t1 | AT3G50300 | 28.333 | 480 | 290 | 12 | 13 | 474 | 3 | 446 | 2.08e-49 | 175 |
| MS.gene41950.t1 | AT5G67160 | 29.237 | 472 | 266 | 16 | 16 | 470 | 7 | 427 | 2.46e-44 | 161 |
| MS.gene41950.t1 | AT3G50280 | 30.769 | 351 | 187 | 11 | 134 | 471 | 2 | 309 | 1.29e-42 | 153 |
| MS.gene41950.t1 | AT5G38130 | 27.074 | 458 | 282 | 11 | 14 | 457 | 24 | 443 | 4.96e-41 | 153 |
| MS.gene41950.t1 | AT5G48930 | 25.636 | 472 | 303 | 17 | 12 | 474 | 1 | 433 | 1.25e-33 | 132 |
| MS.gene41950.t1 | AT2G19070 | 27.061 | 473 | 275 | 16 | 19 | 461 | 8 | 440 | 5.79e-31 | 124 |
| MS.gene41950.t1 | AT3G50290 | 27.362 | 307 | 173 | 7 | 127 | 421 | 1 | 269 | 1.13e-27 | 112 |
| MS.gene41950.t1 | AT5G41040 | 26.923 | 468 | 283 | 15 | 12 | 466 | 31 | 452 | 1.64e-26 | 112 |
| MS.gene41950.t1 | AT5G41040 | 27.214 | 463 | 278 | 15 | 12 | 461 | 15 | 431 | 1.95e-26 | 111 |
| MS.gene41950.t1 | AT5G63560 | 26.683 | 416 | 238 | 13 | 60 | 461 | 55 | 417 | 6.50e-25 | 107 |
| MS.gene41950.t1 | AT5G57840 | 24.838 | 463 | 287 | 16 | 12 | 454 | 1 | 422 | 9.22e-24 | 103 |
| MS.gene41950.t1 | AT3G48720 | 26.667 | 435 | 252 | 17 | 49 | 466 | 42 | 426 | 1.43e-23 | 103 |
| MS.gene41950.t1 | AT3G29635 | 27.791 | 421 | 254 | 17 | 35 | 434 | 29 | 420 | 4.12e-22 | 99.0 |
| MS.gene41950.t1 | AT1G03940 | 25.720 | 486 | 281 | 22 | 15 | 461 | 9 | 453 | 4.38e-20 | 93.2 |
| MS.gene41950.t1 | AT5G39080 | 25.376 | 465 | 273 | 16 | 35 | 464 | 28 | 453 | 1.48e-18 | 88.6 |
| MS.gene41950.t1 | AT5G61160 | 23.308 | 399 | 269 | 11 | 38 | 423 | 28 | 402 | 4.71e-17 | 84.0 |
| MS.gene41950.t1 | AT5G07080 | 22.727 | 462 | 320 | 11 | 1 | 454 | 1 | 433 | 3.65e-16 | 80.9 |
| MS.gene41950.t1 | AT1G32910 | 22.656 | 384 | 251 | 10 | 51 | 423 | 50 | 398 | 1.50e-15 | 79.3 |
| MS.gene41950.t1 | AT1G03495 | 27.429 | 350 | 190 | 18 | 24 | 343 | 19 | 334 | 1.90e-15 | 77.8 |
| MS.gene41950.t1 | AT5G39090 | 25.055 | 451 | 278 | 18 | 35 | 464 | 28 | 439 | 1.13e-14 | 76.3 |
| MS.gene41950.t1 | AT1G03390 | 24.747 | 396 | 241 | 18 | 44 | 423 | 52 | 406 | 2.00e-14 | 75.9 |
| MS.gene41950.t1 | AT5G39050 | 24.762 | 315 | 197 | 8 | 129 | 426 | 131 | 422 | 8.94e-14 | 73.6 |
| MS.gene41950.t1 | AT3G47170 | 24.340 | 341 | 210 | 14 | 69 | 392 | 73 | 382 | 9.40e-13 | 70.5 |
| MS.gene41950.t1 | AT1G28680 | 24.172 | 302 | 189 | 9 | 140 | 437 | 135 | 400 | 2.82e-12 | 68.9 |
| MS.gene41950.t1 | AT1G28680 | 25.108 | 231 | 141 | 6 | 140 | 369 | 135 | 334 | 4.13e-12 | 68.2 |
Find 136 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGAAGTTCACCTAGGTTTA+AGG | 0.194532 | 6.4:-19160357 | MS.gene41950:CDS |
| CACACGTGTGTTTCGGGCCT+TGG | 0.203708 | 6.4:+19160973 | None:intergenic |
| GGTTGATGGTGGTGGGCCTT+TGG | 0.220575 | 6.4:+19160925 | None:intergenic |
| CATCAACTAGCTGGTAAATT+AGG | 0.221803 | 6.4:-19163672 | MS.gene41950:CDS |
| TCACCATTGGCTGATGGTGC+TGG | 0.226535 | 6.4:+19160872 | None:intergenic |
| TTATAGTGGAATCTTGAATT+TGG | 0.232801 | 6.4:-19163508 | MS.gene41950:CDS |
| AGGCTCTCTCCACTCATATT+TGG | 0.242867 | 6.4:-19160685 | MS.gene41950:CDS |
| CATGGCCTTCAATTACCTTT+TGG | 0.245260 | 6.4:+19160471 | None:intergenic |
| GTTGATGGTGGTGGGCCTTT+GGG | 0.256743 | 6.4:+19160926 | None:intergenic |
| TAGACCCTTGTTGGCTGTTC+AGG | 0.257806 | 6.4:-19163475 | MS.gene41950:intron |
| TGTTACGGCTGCTGGGCTTT+TGG | 0.267767 | 6.4:-19160528 | MS.gene41950:CDS |
| AAGGTTTATGACATTGATTT+TGG | 0.269945 | 6.4:-19160338 | MS.gene41950:CDS |
| GCAAGATAAGGAATTTCTTA+TGG | 0.279006 | 6.4:-19160177 | MS.gene41950:CDS |
| AAAATCATTCTCAACTTTCC+AGG | 0.285870 | 6.4:-19160705 | MS.gene41950:CDS |
| TGGTGGTGGGCCTTTGGGCT+CGG | 0.285991 | 6.4:+19160931 | None:intergenic |
| CAAGCTTCACACGTGTGTTT+CGG | 0.288866 | 6.4:+19160966 | None:intergenic |
| CACAACAGCCCAACCATTCT+TGG | 0.294816 | 6.4:-19161002 | MS.gene41950:CDS |
| CAGTGAATATAGCTTGAATT+AGG | 0.307147 | 6.4:+19160549 | None:intergenic |
| ATATTCACTGTTACGGCTGC+TGG | 0.323322 | 6.4:-19160536 | MS.gene41950:CDS |
| AGGAATCAATTCCTTCAAAA+TGG | 0.325774 | 6.4:+19163530 | None:intergenic |
| AAGCTTCACACGTGTGTTTC+GGG | 0.326495 | 6.4:+19160967 | None:intergenic |
| TTTAACCATGCTGTCCTTGA+TGG | 0.331947 | 6.4:-19161082 | MS.gene41950:CDS |
| CATCCCATCAAATTTGTTGT+TGG | 0.353936 | 6.4:+19160283 | None:intergenic |
| AAATTCAAGATTCCACTATA+AGG | 0.356072 | 6.4:+19163510 | None:intergenic |
| GCCTTGGTTCTTTCCAAGAA+TGG | 0.370836 | 6.4:+19160989 | None:intergenic |
| GTGAACACTGTGTAATCTTC+GGG | 0.376113 | 6.4:+19160632 | None:intergenic |
| AAGGAATTGATTCCTTATAG+TGG | 0.380758 | 6.4:-19163522 | MS.gene41950:CDS |
| TTTACCTCACCATTGGTTGA+TGG | 0.382680 | 6.4:+19160911 | None:intergenic |
| GGTTCTTTCCAAGAATGGTT+GGG | 0.392557 | 6.4:+19160994 | None:intergenic |
| AACATTGGAGCCTGAGGCTA+TGG | 0.403215 | 6.4:-19160210 | MS.gene41950:CDS |
| CACCATTGGCTGATGGTGCT+GGG | 0.403622 | 6.4:+19160873 | None:intergenic |
| GGTGGTGGGCCTTTGGGCTC+GGG | 0.405627 | 6.4:+19160932 | None:intergenic |
| GTTCCACTTCTCACAATCTC+TGG | 0.407858 | 6.4:+19160305 | None:intergenic |
| CGTGGCACTTCATGACTTCA+TGG | 0.418816 | 6.4:-19161051 | MS.gene41950:CDS |
| GCGGCTCACCCGCCACAATT+CGG | 0.419308 | 6.4:-19160506 | MS.gene41950:CDS |
| GGAACCAACAACAAATTTGA+TGG | 0.429115 | 6.4:-19160287 | MS.gene41950:CDS |
| CATCAATAGCTTTAGCATCA+TGG | 0.431488 | 6.4:+19160453 | None:intergenic |
| TGGTTCTTTCCAAGAATGGT+TGG | 0.433192 | 6.4:+19160993 | None:intergenic |
| CAGCTAACAAAGCTTAAAGA+TGG | 0.433635 | 6.4:-19161124 | MS.gene41950:CDS |
| CTTTGGGCTCGGGTAGGGAG+AGG | 0.433813 | 6.4:+19160942 | None:intergenic |
| TGGGCCTTTGGGCTCGGGTA+GGG | 0.433931 | 6.4:+19160937 | None:intergenic |
| TCAAGCTATATTCACTGTTA+CGG | 0.434459 | 6.4:-19160543 | MS.gene41950:CDS |
| CTCCTCCCTCCACTCTTGCC+TGG | 0.434809 | 6.4:+19160248 | None:intergenic |
| TTCATCCTTTACCTCACCAT+TGG | 0.434849 | 6.4:+19160904 | None:intergenic |
| TTGATCCAAAAGGTAATTGA+AGG | 0.436135 | 6.4:-19160476 | MS.gene41950:CDS |
| GTGAGGCAAGGCCCATACTT+AGG | 0.436505 | 6.4:-19160808 | MS.gene41950:CDS |
| CCAAAGTATGCCTCCGGCAT+TGG | 0.437756 | 6.4:+19160575 | None:intergenic |
| CGGCGCTTCTTTGATCCAAA+AGG | 0.441589 | 6.4:-19160486 | MS.gene41950:CDS |
| CACAGTGTTCACAGTCTTCG+CGG | 0.443877 | 6.4:-19160621 | MS.gene41950:CDS |
| TTCAACCTTTGCCTCACCAT+TGG | 0.443928 | 6.4:+19160859 | None:intergenic |
| GGGATGATTTATTTGTATCC+AGG | 0.445149 | 6.4:-19160266 | MS.gene41950:CDS |
| CCAATGCCGGAGGCATACTT+TGG | 0.452064 | 6.4:-19160575 | MS.gene41950:CDS |
| TGTGAACACTGTGTAATCTT+CGG | 0.452933 | 6.4:+19160631 | None:intergenic |
| GTGGGCCTTTGGGCTCGGGT+AGG | 0.453995 | 6.4:+19160936 | None:intergenic |
| CTTGCCTCACCTTTGACTGA+TGG | 0.456250 | 6.4:+19160821 | None:intergenic |
| TCACCATTGGTTGATGGTGG+TGG | 0.462091 | 6.4:+19160917 | None:intergenic |
| AAATATGAGTGGAGAGAGCC+TGG | 0.462148 | 6.4:+19160687 | None:intergenic |
| GCCTCACCTTTGACTGATGG+TGG | 0.464493 | 6.4:+19160824 | None:intergenic |
| CTCACCTTTGACTGATGGTG+GGG | 0.466633 | 6.4:+19160826 | None:intergenic |
| AATGTTGAGAAACTCAAGAA+TGG | 0.466672 | 6.4:-19163720 | MS.gene41950:CDS |
| CTTAAAGATGGGCTAGCAAT+GGG | 0.473029 | 6.4:-19161112 | MS.gene41950:CDS |
| AAGGAGTTTCATCAACTAGC+TGG | 0.476215 | 6.4:-19163681 | MS.gene41950:CDS |
| GAATGGTTGGGCTGTTGTGA+TGG | 0.476607 | 6.4:+19161006 | None:intergenic |
| GAAGCTGTTGCTGATGAGAT+TGG | 0.480686 | 6.4:-19163585 | MS.gene41950:CDS |
| AACCGTCCGATGGAAGGGTT+TGG | 0.481347 | 6.4:+19160729 | None:intergenic |
| CCTCACCTTTGACTGATGGT+GGG | 0.484738 | 6.4:+19160825 | None:intergenic |
| TGAGGCAAGGCCCATACTTA+GGG | 0.488757 | 6.4:-19160807 | MS.gene41950:CDS |
| GCCTGAGGCTATGGGAAGGT+TGG | 0.493581 | 6.4:-19160201 | MS.gene41950:CDS |
| ATCAACCAATGGTGAGGTAA+AGG | 0.505373 | 6.4:-19160909 | MS.gene41950:CDS |
| AGATGGGCTAGCAATGGGCT+TGG | 0.506336 | 6.4:-19161107 | MS.gene41950:CDS |
| TTTGCCTCACCATTGGCTGA+TGG | 0.513475 | 6.4:+19160866 | None:intergenic |
| TCCAACCTTCCCATAGCCTC+AGG | 0.514780 | 6.4:+19160200 | None:intergenic |
| AAGTATGCCTCCGGCATTGG+TGG | 0.514989 | 6.4:+19160578 | None:intergenic |
| TATTCACTGTTACGGCTGCT+GGG | 0.516651 | 6.4:-19160535 | MS.gene41950:CDS |
| AGTGGAATCTTGAATTTGGA+AGG | 0.516771 | 6.4:-19163504 | MS.gene41950:CDS |
| CATTGATGTTGAATTAACAT+TGG | 0.517058 | 6.4:-19160225 | MS.gene41950:CDS |
| AGGTTTCCAAAGTATGCCTC+CGG | 0.518580 | 6.4:+19160569 | None:intergenic |
| GCTTAAAGATGGGCTAGCAA+TGG | 0.522409 | 6.4:-19161113 | MS.gene41950:CDS |
| ATGTCATAAACCTTAAACCT+AGG | 0.527449 | 6.4:+19160347 | None:intergenic |
| ACGAGTGAACCCACCAATGC+CGG | 0.528510 | 6.4:-19160588 | MS.gene41950:CDS |
| ATGTTGAGAAACTCAAGAAT+GGG | 0.530484 | 6.4:-19163719 | MS.gene41950:CDS |
| GGGTCCACCACTGCATATCT+CGG | 0.531397 | 6.4:+19161027 | None:intergenic |
| GGGAAGGTTGGAGCAAGATA+AGG | 0.542296 | 6.4:-19160189 | MS.gene41950:CDS |
| CACCATTGGTTGATGGTGGT+GGG | 0.542387 | 6.4:+19160918 | None:intergenic |
| GGTGTGAATTGTGTTGCAGT+TGG | 0.547554 | 6.4:-19160377 | MS.gene41950:CDS |
| AAGAAGCGCCGAATTGTGGC+GGG | 0.553972 | 6.4:+19160498 | None:intergenic |
| AGCTAACAAAGCTTAAAGAT+GGG | 0.555121 | 6.4:-19161123 | MS.gene41950:CDS |
| AATGGTTGGGCTGTTGTGAT+GGG | 0.555391 | 6.4:+19161007 | None:intergenic |
| ATCAAAGAAGCGCCGAATTG+TGG | 0.558770 | 6.4:+19160494 | None:intergenic |
| TGTATCCAGGCAAGAGTGGA+GGG | 0.559507 | 6.4:-19160253 | MS.gene41950:CDS |
| GAATATGATGATGACTTGGT+TGG | 0.560722 | 6.4:-19163621 | MS.gene41950:CDS |
| TGTTGAATATGATGATGACT+TGG | 0.566299 | 6.4:-19163625 | MS.gene41950:CDS |
| TCACCTTTGACTGATGGTGG+GGG | 0.566819 | 6.4:+19160827 | None:intergenic |
| AAGCCAGAGATTGTGAGAAG+TGG | 0.568369 | 6.4:-19160308 | MS.gene41950:CDS |
| TTGATGAACGTAACAAAGAG+TGG | 0.570116 | 6.4:-19160436 | MS.gene41950:CDS |
| GTGGCACTTCATGACTTCAT+GGG | 0.571085 | 6.4:-19161050 | MS.gene41950:CDS |
| ATCAGCCAATGGTGAGGCAA+AGG | 0.577906 | 6.4:-19160864 | MS.gene41950:CDS |
| TTGTATCCAGGCAAGAGTGG+AGG | 0.579701 | 6.4:-19160254 | MS.gene41950:CDS |
| AGTATGCCTCCGGCATTGGT+GGG | 0.580863 | 6.4:+19160579 | None:intergenic |
| AGGCATGCATAGACCCTTGT+TGG | 0.581452 | 6.4:-19163484 | MS.gene41950:CDS |
| ACCTCACCATTGGTTGATGG+TGG | 0.581928 | 6.4:+19160914 | None:intergenic |
| GAACCAACAACAAATTTGAT+GGG | 0.585695 | 6.4:-19160286 | MS.gene41950:CDS |
| AATTACCTGAACAGCCAACA+AGG | 0.594893 | 6.4:+19163470 | None:intergenic |
| AAAGAAGCGCCGAATTGTGG+CGG | 0.595569 | 6.4:+19160497 | None:intergenic |
| TTGCAGTTGGAAGTTCACCT+AGG | 0.596541 | 6.4:-19160364 | MS.gene41950:CDS |
| CTCTCCCTACCCGAGCCCAA+AGG | 0.598539 | 6.4:-19160941 | MS.gene41950:CDS |
| GTTCACGTGCAAGGCTCACG+TGG | 0.602181 | 6.4:+19160660 | None:intergenic |
| ACATTGGAGCCTGAGGCTAT+GGG | 0.602218 | 6.4:-19160209 | MS.gene41950:CDS |
| TAAATTAGGAAAAGATGAAG+AGG | 0.606100 | 6.4:-19163658 | MS.gene41950:CDS |
| TGATGAACGTAACAAAGAGT+GGG | 0.610084 | 6.4:-19160435 | MS.gene41950:CDS |
| TACCAAACCCTTCCATCGGA+CGG | 0.616078 | 6.4:-19160731 | MS.gene41950:CDS |
| AGCACCATCAGCCAATGGTG+AGG | 0.618064 | 6.4:-19160870 | MS.gene41950:CDS |
| GCCACGTGGATGTTCCATCA+AGG | 0.620237 | 6.4:+19161068 | None:intergenic |
| TGAATTAACATTGGAGCCTG+AGG | 0.623430 | 6.4:-19160216 | MS.gene41950:CDS |
| GAGGTAAAGGATGAACAGAA+TGG | 0.627659 | 6.4:-19160896 | MS.gene41950:CDS |
| GGCCCAGCACCATCAGCCAA+TGG | 0.630831 | 6.4:-19160875 | MS.gene41950:CDS |
| CATCAGTCAAAGGTGAGGCA+AGG | 0.631349 | 6.4:-19160820 | MS.gene41950:CDS |
| AAATTAGGAAAAGATGAAGA+GGG | 0.635748 | 6.4:-19163657 | MS.gene41950:CDS |
| CACGTGGCGCCAAATATGAG+TGG | 0.636105 | 6.4:+19160676 | None:intergenic |
| TATTTGTATCCAGGCAAGAG+TGG | 0.639070 | 6.4:-19160257 | MS.gene41950:CDS |
| ACCATTCTTGGAAAGAACCA+AGG | 0.640231 | 6.4:-19160990 | MS.gene41950:CDS |
| GGCCCACCACCATCAACCAA+TGG | 0.643022 | 6.4:-19160920 | MS.gene41950:CDS |
| AGTCTACCAAACCCTTCCAT+CGG | 0.650039 | 6.4:-19160735 | MS.gene41950:CDS |
| ATGTTCCATCAAGGACAGCA+TGG | 0.653199 | 6.4:+19161077 | None:intergenic |
| CAAAAGCTATGTGAAACCTG+AGG | 0.658022 | 6.4:-19163850 | MS.gene41950:CDS |
| GAGGCAAAGGTTGAACCCGA+AGG | 0.658181 | 6.4:-19160851 | MS.gene41950:CDS |
| AGTGAACCCACCAATGCCGG+AGG | 0.665412 | 6.4:-19160585 | MS.gene41950:CDS |
| CCCACCATCAGTCAAAGGTG+AGG | 0.665634 | 6.4:-19160825 | MS.gene41950:CDS |
| TGGGCCGAGATATGCAGTGG+TGG | 0.665900 | 6.4:-19161031 | MS.gene41950:CDS |
| ACCACCATCAACCAATGGTG+AGG | 0.669817 | 6.4:-19160915 | MS.gene41950:CDS |
| TCATGGGCCGAGATATGCAG+TGG | 0.679492 | 6.4:-19161034 | MS.gene41950:CDS |
| TGGAGCCTGAGGCTATGGGA+AGG | 0.683457 | 6.4:-19160205 | MS.gene41950:CDS |
| ATTACCTGAACAGCCAACAA+GGG | 0.693693 | 6.4:+19163471 | None:intergenic |
| ATCCAGGCAAGAGTGGAGGG+AGG | 0.695098 | 6.4:-19160250 | MS.gene41950:CDS |
| TGAAGTCATGAAGTGCCACG+TGG | 0.764930 | 6.4:+19161054 | None:intergenic |
| TCCTTGATGGAACATCCACG+TGG | 0.766828 | 6.4:-19161069 | MS.gene41950:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAGTTATAATTTATAAG+AGG | - | chr6.4:19162519-19162538 | MS.gene41950:intron | 10.0% |
| !! | ATAATAGAATATCATTAAAT+AGG | - | chr6.4:19161251-19161270 | MS.gene41950:intron | 10.0% |
| !! | ATTTAATGATATTCTATTAT+TGG | + | chr6.4:19161251-19161270 | None:intergenic | 10.0% |
| !! | TTAAATTAAAATATACTAGT+AGG | - | chr6.4:19160750-19160769 | MS.gene41950:CDS | 10.0% |
| !!! | AATTTAATCAATTTTAGAAA+TGG | + | chr6.4:19160685-19160704 | None:intergenic | 10.0% |
| !!! | CAAAAATTAATTTTTTACAA+AGG | - | chr6.4:19160313-19160332 | MS.gene41950:CDS | 10.0% |
| !!! | CTTTGTAAAAAATTAATTTT+TGG | + | chr6.4:19160315-19160334 | None:intergenic | 10.0% |
| !!! | CTTTTGTTTATATTTTATTT+TGG | - | chr6.4:19161617-19161636 | MS.gene41950:intron | 10.0% |
| !!! | GGAATTTAAAATTTATTTTT+TGG | + | chr6.4:19162021-19162040 | None:intergenic | 10.0% |
| !!! | TTATCTTGTTTTTAAATATT+CGG | + | chr6.4:19162807-19162826 | None:intergenic | 10.0% |
| !! | AATGTAAAAAAAGAGTAATT+TGG | + | chr6.4:19161403-19161422 | None:intergenic | 15.0% |
| !! | ATATTCTATTATTGGAAAAT+AGG | + | chr6.4:19161243-19161262 | None:intergenic | 15.0% |
| !! | TTTACATTATATTTACCTTA+AGG | - | chr6.4:19161415-19161434 | MS.gene41950:intron | 15.0% |
| !!! | AAATTAATTTTTTACAAAGG+AGG | - | chr6.4:19160316-19160335 | MS.gene41950:CDS | 15.0% |
| !!! | AATTATTTTAACCATTTCTT+AGG | + | chr6.4:19162381-19162400 | None:intergenic | 15.0% |
| !!! | ATTAGTTTAATCATAATCAA+CGG | + | chr6.4:19162353-19162372 | None:intergenic | 15.0% |
| !!! | TATAATTTATAAGAGGATTT+TGG | - | chr6.4:19162526-19162545 | MS.gene41950:intron | 15.0% |
| !!! | TATTTTTGGAAGTTATATAT+GGG | + | chr6.4:19162576-19162595 | None:intergenic | 15.0% |
| !!! | TTATTTTTGGAAGTTATATA+TGG | + | chr6.4:19162577-19162596 | None:intergenic | 15.0% |
| !!! | TTGTTTATATTTTATTTTGG+AGG | - | chr6.4:19161620-19161639 | MS.gene41950:intron | 15.0% |
| !!! | TTTATCTTATCCTTTTTTAT+TGG | + | chr6.4:19162088-19162107 | None:intergenic | 15.0% |
| !! | AGGTATTATTTAAACTCAAA+TGG | - | chr6.4:19161643-19161662 | MS.gene41950:intron | 20.0% |
| !! | AGTCATAAATCATACAAATA+AGG | + | chr6.4:19162907-19162926 | None:intergenic | 20.0% |
| !! | AGTTGAAAAATCAATGTATA+TGG | + | chr6.4:19161593-19161612 | None:intergenic | 20.0% |
| !! | ATATTTGTGGAAGTTATATA+TGG | + | chr6.4:19161174-19161193 | None:intergenic | 20.0% |
| !! | ATCTTTGAATTGAAAAATCT+TGG | + | chr6.4:19163672-19163691 | None:intergenic | 20.0% |
| !! | ATTAAACAACCATTACTATA+AGG | + | chr6.4:19161980-19161999 | None:intergenic | 20.0% |
| !! | ATTCACTCTTAATAAACAAA+TGG | + | chr6.4:19162222-19162241 | None:intergenic | 20.0% |
| !! | CATTAAATACCTTATAGTAA+TGG | - | chr6.4:19161968-19161987 | MS.gene41950:intron | 20.0% |
| !! | TAAATCATACAAATAAGGAA+AGG | + | chr6.4:19162902-19162921 | None:intergenic | 20.0% |
| !! | TAAATCTCAACCAATAAAAA+AGG | - | chr6.4:19162075-19162094 | MS.gene41950:intron | 20.0% |
| !! | TATTTGTGGAAGTTATATAT+GGG | + | chr6.4:19161173-19161192 | None:intergenic | 20.0% |
| !! | TCTTTGAATTGAAAAATCTT+GGG | + | chr6.4:19163671-19163690 | None:intergenic | 20.0% |
| !! | TGAAGAAAATTAAATTCACT+AGG | + | chr6.4:19162178-19162197 | None:intergenic | 20.0% |
| !! | TTAAATCAAAACCTAAATGT+AGG | + | chr6.4:19160781-19160800 | None:intergenic | 20.0% |
| !!! | AAAGTGAATCTCTTTATTTT+TGG | + | chr6.4:19162590-19162609 | None:intergenic | 20.0% |
| !!! | ATTTAAAATCATAGCCTAAA+GGG | - | chr6.4:19160898-19160917 | MS.gene41950:CDS | 20.0% |
| !!! | TAATTGTGTTGTTTTGTTTT+CGG | - | chr6.4:19162396-19162415 | MS.gene41950:intron | 20.0% |
| !!! | TATTTAAAATCATAGCCTAA+AGG | - | chr6.4:19160897-19160916 | MS.gene41950:CDS | 20.0% |
| !!! | TTTATATTTTATTTTGGAGG+AGG | - | chr6.4:19161623-19161642 | MS.gene41950:intron | 20.0% |
| ! | AAATAACAAAAAGAGGACAT+AGG | + | chr6.4:19162618-19162637 | None:intergenic | 25.0% |
| ! | AAATTAGGAAAAGATGAAGA+GGG | - | chr6.4:19160415-19160434 | MS.gene41950:CDS | 25.0% |
| ! | AAATTCAAGATTCCACTATA+AGG | + | chr6.4:19160565-19160584 | None:intergenic | 25.0% |
| ! | AACCACATTTAGATAGTATT+TGG | + | chr6.4:19161076-19161095 | None:intergenic | 25.0% |
| ! | ATAGCAAATCTCTATATTTG+TGG | + | chr6.4:19161187-19161206 | None:intergenic | 25.0% |
| ! | ATGTAAATATGACATGTGAA+AGG | + | chr6.4:19162869-19162888 | None:intergenic | 25.0% |
| ! | ATGTCATGAAATAAGACAAA+TGG | - | chr6.4:19162649-19162668 | MS.gene41950:intron | 25.0% |
| ! | ATTAAATTCACTAGGTAGAT+TGG | + | chr6.4:19162170-19162189 | None:intergenic | 25.0% |
| ! | CATTGATGTTGAATTAACAT+TGG | - | chr6.4:19163847-19163866 | MS.gene41950:CDS | 25.0% |
| ! | CCATTGGTGTATTTAAAAAA+TGG | - | chr6.4:19162756-19162775 | MS.gene41950:intron | 25.0% |
| ! | GGTCAAAAAATAACAAAAAG+AGG | + | chr6.4:19162625-19162644 | None:intergenic | 25.0% |
| ! | TAAAAATCAAAACAAGACAC+AGG | + | chr6.4:19161215-19161234 | None:intergenic | 25.0% |
| ! | TAAATACACCAATGGTAATT+TGG | + | chr6.4:19162751-19162770 | None:intergenic | 25.0% |
| ! | TAAATTAGGAAAAGATGAAG+AGG | - | chr6.4:19160414-19160433 | MS.gene41950:CDS | 25.0% |
| ! | TACAAAAACTAGATACCTTA+AGG | + | chr6.4:19161433-19161452 | None:intergenic | 25.0% |
| ! | TGTAAATATGACATGTGAAA+GGG | + | chr6.4:19162868-19162887 | None:intergenic | 25.0% |
| ! | TTGTAGTAAAAAGCTAAGTA+AGG | + | chr6.4:19160292-19160311 | None:intergenic | 25.0% |
| ! | TTTAGATAGTATTTGGCATT+TGG | + | chr6.4:19161069-19161088 | None:intergenic | 25.0% |
| !! | TTATAGTGGAATCTTGAATT+TGG | - | chr6.4:19160564-19160583 | MS.gene41950:CDS | 25.0% |
| !! | TTCTACTCTAATTGTTACTT+GGG | + | chr6.4:19161355-19161374 | None:intergenic | 25.0% |
| !!! | AAGATTTTTTCCCTAAGTAT+GGG | + | chr6.4:19163278-19163297 | None:intergenic | 25.0% |
| !!! | AAGGTTTATGACATTGATTT+TGG | - | chr6.4:19163734-19163753 | MS.gene41950:CDS | 25.0% |
| !!! | ATGACATTGATTTTGGATTT+GGG | - | chr6.4:19163741-19163760 | MS.gene41950:CDS | 25.0% |
| !!! | ATTTTTCAATTCAAAGATGC+TGG | - | chr6.4:19163674-19163693 | MS.gene41950:CDS | 25.0% |
| !!! | CCATTTTTTAAATACACCAA+TGG | + | chr6.4:19162759-19162778 | None:intergenic | 25.0% |
| !!! | GTCTTATTTCATGACATTAT+TGG | + | chr6.4:19162646-19162665 | None:intergenic | 25.0% |
| !!! | TATGACATTGATTTTGGATT+TGG | - | chr6.4:19163740-19163759 | MS.gene41950:CDS | 25.0% |
| AAAATCATTCTCAACTTTCC+AGG | - | chr6.4:19163367-19163386 | MS.gene41950:intron | 30.0% | |
| AATGTTGAGAAACTCAAGAA+TGG | - | chr6.4:19160352-19160371 | MS.gene41950:CDS | 30.0% | |
| ACTAATTGTAGCCTAAGAAA+TGG | - | chr6.4:19162367-19162386 | MS.gene41950:intron | 30.0% | |
| AGATTGAAAACCACAAAACA+AGG | - | chr6.4:19161115-19161134 | MS.gene41950:CDS | 30.0% | |
| AGCTAACAAAGCTTAAAGAT+GGG | - | chr6.4:19162949-19162968 | MS.gene41950:intron | 30.0% | |
| AGGAATCAATTCCTTCAAAA+TGG | + | chr6.4:19160545-19160564 | None:intergenic | 30.0% | |
| AGTAAAAAGCTAAGTAAGGT+AGG | + | chr6.4:19160288-19160307 | None:intergenic | 30.0% | |
| ATGTCATAAACCTTAAACCT+AGG | + | chr6.4:19163728-19163747 | None:intergenic | 30.0% | |
| ATGTTGAGAAACTCAAGAAT+GGG | - | chr6.4:19160353-19160372 | MS.gene41950:CDS | 30.0% | |
| CAGTGAATATAGCTTGAATT+AGG | + | chr6.4:19163526-19163545 | None:intergenic | 30.0% | |
| CATACAAATAAGGAAAGGAA+AGG | + | chr6.4:19162897-19162916 | None:intergenic | 30.0% | |
| CTTCTACTCTAATTGTTACT+TGG | + | chr6.4:19161356-19161375 | None:intergenic | 30.0% | |
| GAACCAACAACAAATTTGAT+GGG | - | chr6.4:19163786-19163805 | MS.gene41950:CDS | 30.0% | |
| GATTGAAAACCACAAAACAA+GGG | - | chr6.4:19161116-19161135 | MS.gene41950:CDS | 30.0% | |
| GCAAGATAAGGAATTTCTTA+TGG | - | chr6.4:19163895-19163914 | MS.gene41950:CDS | 30.0% | |
| TCAAGCTATATTCACTGTTA+CGG | - | chr6.4:19163529-19163548 | MS.gene41950:CDS | 30.0% | |
| TGAAACCTGAGGAAAAAATT+GGG | - | chr6.4:19160233-19160252 | MS.gene41950:CDS | 30.0% | |
| TGAGGAAAAAATTGGGAAAA+AGG | - | chr6.4:19160240-19160259 | MS.gene41950:CDS | 30.0% | |
| TGCCAAATACTATCTAAATG+TGG | - | chr6.4:19161071-19161090 | MS.gene41950:CDS | 30.0% | |
| TGTTGAAAAGTTTGTGTATG+TGG | - | chr6.4:19161554-19161573 | MS.gene41950:intron | 30.0% | |
| TTGATCCAAAAGGTAATTGA+AGG | - | chr6.4:19163596-19163615 | MS.gene41950:CDS | 30.0% | |
| ! | AACTGCAACTAATTTTTCTG+CGG | + | chr6.4:19162042-19162061 | None:intergenic | 30.0% |
| ! | AAGGAATTGATTCCTTATAG+TGG | - | chr6.4:19160550-19160569 | MS.gene41950:CDS | 30.0% |
| ! | ACTATAAGGTATTTAATGCG+TGG | + | chr6.4:19161966-19161985 | None:intergenic | 30.0% |
| ! | ATTAGTTTCACGTTTATGCA+TGG | - | chr6.4:19161797-19161816 | MS.gene41950:intron | 30.0% |
| ! | ATTTTAGATCAATCCACACA+AGG | - | chr6.4:19161900-19161919 | MS.gene41950:intron | 30.0% |
| ! | TGTTGAATATGATGATGACT+TGG | - | chr6.4:19160447-19160466 | MS.gene41950:CDS | 30.0% |
| !! | TTTTTCCCAATTTTTTCCTC+AGG | + | chr6.4:19160241-19160260 | None:intergenic | 30.0% |
| !!! | AGATCTTGTTTTATGCAAAC+CGG | + | chr6.4:19161830-19161849 | None:intergenic | 30.0% |
| !!! | ATCTTTTTTGACTCAATGTG+TGG | + | chr6.4:19161940-19161959 | None:intergenic | 30.0% |
| !!! | GAAGATTTTTTCCCTAAGTA+TGG | + | chr6.4:19163279-19163298 | None:intergenic | 30.0% |
| !!! | TAAATGTATCCCTTGTTTTG+TGG | + | chr6.4:19161128-19161147 | None:intergenic | 30.0% |
| AAAATTGAGCAATGCACACT+TGG | + | chr6.4:19162129-19162148 | None:intergenic | 35.0% | |
| AAGTTGAATGTTGACCCTTT+AGG | + | chr6.4:19160915-19160934 | None:intergenic | 35.0% | |
| ACCAATGGTAATTTGGCAAA+CGG | + | chr6.4:19162744-19162763 | None:intergenic | 35.0% | |
| AGTAGGTGATTCCTACATTT+AGG | - | chr6.4:19160767-19160786 | MS.gene41950:CDS | 35.0% | |
| AGTGGAATCTTGAATTTGGA+AGG | - | chr6.4:19160568-19160587 | MS.gene41950:CDS | 35.0% | |
| ATTGTATTCATATCCGACAC+CGG | - | chr6.4:19162454-19162473 | MS.gene41950:intron | 35.0% | |
| CACACATAGAACTTGATCTA+AGG | - | chr6.4:19161469-19161488 | MS.gene41950:intron | 35.0% | |
| CAGCTAACAAAGCTTAAAGA+TGG | - | chr6.4:19162948-19162967 | MS.gene41950:intron | 35.0% | |
| CATCAACTAGCTGGTAAATT+AGG | - | chr6.4:19160400-19160419 | MS.gene41950:CDS | 35.0% | |
| GCATATGTAACAAGGATTTC+CGG | + | chr6.4:19162476-19162495 | None:intergenic | 35.0% | |
| GGAACCAACAACAAATTTGA+TGG | - | chr6.4:19163785-19163804 | MS.gene41950:CDS | 35.0% | |
| GGGATGATTTATTTGTATCC+AGG | - | chr6.4:19163806-19163825 | MS.gene41950:CDS | 35.0% | |
| GTGAAACCTGAGGAAAAAAT+TGG | - | chr6.4:19160232-19160251 | MS.gene41950:CDS | 35.0% | |
| TGACTTGAGAGATCATAGTT+TGG | - | chr6.4:19161006-19161025 | MS.gene41950:CDS | 35.0% | |
| TGATGAACGTAACAAAGAGT+GGG | - | chr6.4:19163637-19163656 | MS.gene41950:CDS | 35.0% | |
| TGGAAGTTATATATGGGAAG+AGG | + | chr6.4:19162570-19162589 | None:intergenic | 35.0% | |
| TGTGAACACTGTGTAATCTT+CGG | + | chr6.4:19163444-19163463 | None:intergenic | 35.0% | |
| TTGATGAACGTAACAAAGAG+TGG | - | chr6.4:19163636-19163655 | MS.gene41950:CDS | 35.0% | |
| !! | CATCAATAGCTTTAGCATCA+TGG | + | chr6.4:19163622-19163641 | None:intergenic | 35.0% |
| !! | CATCCCATCAAATTTGTTGT+TGG | + | chr6.4:19163792-19163811 | None:intergenic | 35.0% |
| !! | CATCTTTAAGCTTTGTTAGC+TGG | + | chr6.4:19162950-19162969 | None:intergenic | 35.0% |
| !! | GAATATGATGATGACTTGGT+TGG | - | chr6.4:19160451-19160470 | MS.gene41950:CDS | 35.0% |
| !! | TGGGAAAAAGGAGTATCAAT+TGG | - | chr6.4:19160252-19160271 | MS.gene41950:CDS | 35.0% |
| !! | TTTTTGACTCAATGTGTGGT+TGG | + | chr6.4:19161936-19161955 | None:intergenic | 35.0% |
| !!! | GATCTTGTTTTATGCAAACC+GGG | + | chr6.4:19161829-19161848 | None:intergenic | 35.0% |
| !!! | TGAAAGTAGTGCCATTTTGA+AGG | - | chr6.4:19160531-19160550 | MS.gene41950:CDS | 35.0% |
| !!! | TGTTGACTTGATTTTGTCGA+TGG | + | chr6.4:19163318-19163337 | None:intergenic | 35.0% |
| !!! | TTGTGTTGTTTTGTTTTCGG+TGG | - | chr6.4:19162399-19162418 | MS.gene41950:intron | 35.0% |
| AAGGAGTTTCATCAACTAGC+TGG | - | chr6.4:19160391-19160410 | MS.gene41950:CDS | 40.0% | |
| AATTACCTGAACAGCCAACA+AGG | + | chr6.4:19160605-19160624 | None:intergenic | 40.0% | |
| ACCATTCTTGGAAAGAACCA+AGG | - | chr6.4:19163082-19163101 | MS.gene41950:intron | 40.0% | |
| ACCGTTTGCCAAATTACCAT+TGG | - | chr6.4:19162740-19162759 | MS.gene41950:intron | 40.0% | |
| ATCAACCAATGGTGAGGTAA+AGG | - | chr6.4:19163163-19163182 | MS.gene41950:intron | 40.0% | |
| ATTACCTGAACAGCCAACAA+GGG | + | chr6.4:19160604-19160623 | None:intergenic | 40.0% | |
| CAAAAGCTATGTGAAACCTG+AGG | - | chr6.4:19160222-19160241 | MS.gene41950:CDS | 40.0% | |
| CTTAGTACTAGAGCAATGCA+TGG | - | chr6.4:19162315-19162334 | MS.gene41950:intron | 40.0% | |
| GAGGTAAAGGATGAACAGAA+TGG | - | chr6.4:19163176-19163195 | MS.gene41950:intron | 40.0% | |
| GGTTCTTTCCAAGAATGGTT+GGG | + | chr6.4:19163081-19163100 | None:intergenic | 40.0% | |
| GTGAACACTGTGTAATCTTC+GGG | + | chr6.4:19163443-19163462 | None:intergenic | 40.0% | |
| GTTTATGCATGGAGAATACC+CGG | - | chr6.4:19161808-19161827 | MS.gene41950:intron | 40.0% | |
| TATTTGTATCCAGGCAAGAG+TGG | - | chr6.4:19163815-19163834 | MS.gene41950:CDS | 40.0% | |
| TGAATTAACATTGGAGCCTG+AGG | - | chr6.4:19163856-19163875 | MS.gene41950:CDS | 40.0% | |
| TGGAAGTTCACCTAGGTTTA+AGG | - | chr6.4:19163715-19163734 | MS.gene41950:CDS | 40.0% | |
| TGGTTCTTTCCAAGAATGGT+TGG | + | chr6.4:19163082-19163101 | None:intergenic | 40.0% | |
| TTCATCCTTTACCTCACCAT+TGG | + | chr6.4:19163171-19163190 | None:intergenic | 40.0% | |
| TTTAACCATGCTGTCCTTGA+TGG | - | chr6.4:19162990-19163009 | MS.gene41950:intron | 40.0% | |
| ! | AATGATTTTGAACCGTCCGA+TGG | + | chr6.4:19163356-19163375 | None:intergenic | 40.0% |
| ! | CATGGCCTTCAATTACCTTT+TGG | + | chr6.4:19163604-19163623 | None:intergenic | 40.0% |
| ! | TTTACCTCACCATTGGTTGA+TGG | + | chr6.4:19163164-19163183 | None:intergenic | 40.0% |
| !! | CTTAAAGATGGGCTAGCAAT+GGG | - | chr6.4:19162960-19162979 | MS.gene41950:intron | 40.0% |
| !!! | TGGGCTTAGTGTAGTTTTGA+AGG | - | chr6.4:19160372-19160391 | MS.gene41950:CDS | 40.0% |
| AAATATGAGTGGAGAGAGCC+TGG | + | chr6.4:19163388-19163407 | None:intergenic | 45.0% | |
| AAGCCAGAGATTGTGAGAAG+TGG | - | chr6.4:19163764-19163783 | MS.gene41950:CDS | 45.0% | |
| AAGCTTCACACGTGTGTTTC+GGG | + | chr6.4:19163108-19163127 | None:intergenic | 45.0% | |
| AATGGTTGGGCTGTTGTGAT+GGG | + | chr6.4:19163068-19163087 | None:intergenic | 45.0% | |
| ACTAGAGCAATGCATGGCTT+TGG | - | chr6.4:19162321-19162340 | MS.gene41950:intron | 45.0% | |
| AGGCTCTCTCCACTCATATT+TGG | - | chr6.4:19163387-19163406 | MS.gene41950:intron | 45.0% | |
| AGGTTTCCAAAGTATGCCTC+CGG | + | chr6.4:19163506-19163525 | None:intergenic | 45.0% | |
| AGTCTACCAAACCCTTCCAT+CGG | - | chr6.4:19163337-19163356 | MS.gene41950:intron | 45.0% | |
| ATATTCACTGTTACGGCTGC+TGG | - | chr6.4:19163536-19163555 | MS.gene41950:CDS | 45.0% | |
| ATGTTCCATCAAGGACAGCA+TGG | + | chr6.4:19162998-19163017 | None:intergenic | 45.0% | |
| CAAGCTTCACACGTGTGTTT+CGG | + | chr6.4:19163109-19163128 | None:intergenic | 45.0% | |
| CATCACGCGCATATGTAACA+AGG | + | chr6.4:19162484-19162503 | None:intergenic | 45.0% | |
| GAAGCTGTTGCTGATGAGAT+TGG | - | chr6.4:19160487-19160506 | MS.gene41950:CDS | 45.0% | |
| GGTGTGAATTGTGTTGCAGT+TGG | - | chr6.4:19163695-19163714 | MS.gene41950:CDS | 45.0% | |
| GTAACAAGGATTTCCGGTGT+CGG | + | chr6.4:19162470-19162489 | None:intergenic | 45.0% | |
| GTGGCACTTCATGACTTCAT+GGG | - | chr6.4:19163022-19163041 | MS.gene41950:intron | 45.0% | |
| GTTCCACTTCTCACAATCTC+TGG | + | chr6.4:19163770-19163789 | None:intergenic | 45.0% | |
| TATTCACTGTTACGGCTGCT+GGG | - | chr6.4:19163537-19163556 | MS.gene41950:CDS | 45.0% | |
| TGGCATTTGGAGAGAACTCT+AGG | + | chr6.4:19161056-19161075 | None:intergenic | 45.0% | |
| TTCAACCTTTGCCTCACCAT+TGG | + | chr6.4:19163216-19163235 | None:intergenic | 45.0% | |
| TTGCAGTTGGAAGTTCACCT+AGG | - | chr6.4:19163708-19163727 | MS.gene41950:CDS | 45.0% | |
| ! | ATTTTGAACCGTCCGATGGA+AGG | + | chr6.4:19163352-19163371 | None:intergenic | 45.0% |
| ! | GATTTTGTCGATGGCTGACT+CGG | + | chr6.4:19163309-19163328 | None:intergenic | 45.0% |
| ! | GCCTTGGTTCTTTCCAAGAA+TGG | + | chr6.4:19163086-19163105 | None:intergenic | 45.0% |
| ! | TGGCTGATCTTTTCCTTGTG+TGG | + | chr6.4:19161916-19161935 | None:intergenic | 45.0% |
| ! | TTTTGAACCGTCCGATGGAA+GGG | + | chr6.4:19163351-19163370 | None:intergenic | 45.0% |
| !! | ATCAAAGAAGCGCCGAATTG+TGG | + | chr6.4:19163581-19163600 | None:intergenic | 45.0% |
| !! | GCTTAAAGATGGGCTAGCAA+TGG | - | chr6.4:19162959-19162978 | MS.gene41950:intron | 45.0% |
| !! | TTTAGATTTAAAAAAATTTA+AGG | - | chr6.4:19161774-19161793 | MS.gene41950:intron | 5.0% |
| !!! | AAATTTTTTTAAATCTAAAT+TGG | + | chr6.4:19161773-19161792 | None:intergenic | 5.0% |
| !!! | AGTATATTTTAATTTAAAAA+TGG | + | chr6.4:19160747-19160766 | None:intergenic | 5.0% |
| !!! | GAATTTAAAATTTATTTTTT+GGG | + | chr6.4:19162020-19162039 | None:intergenic | 5.0% |
| AACATTGGAGCCTGAGGCTA+TGG | - | chr6.4:19163862-19163881 | MS.gene41950:CDS | 50.0% | |
| ACATTGGAGCCTGAGGCTAT+GGG | - | chr6.4:19163863-19163882 | MS.gene41950:CDS | 50.0% | |
| ACCACCATCAACCAATGGTG+AGG | - | chr6.4:19163157-19163176 | MS.gene41950:intron | 50.0% | |
| AGGCATGCATAGACCCTTGT+TGG | - | chr6.4:19160588-19160607 | MS.gene41950:CDS | 50.0% | |
| ATCAGCCAATGGTGAGGCAA+AGG | - | chr6.4:19163208-19163227 | MS.gene41950:intron | 50.0% | |
| CACAACAGCCCAACCATTCT+TGG | - | chr6.4:19163070-19163089 | MS.gene41950:intron | 50.0% | |
| CACAGTGTTCACAGTCTTCG+CGG | - | chr6.4:19163451-19163470 | MS.gene41950:intron | 50.0% | |
| CATCAGTCAAAGGTGAGGCA+AGG | - | chr6.4:19163252-19163271 | MS.gene41950:intron | 50.0% | |
| CCTCACCTTTGACTGATGGT+GGG | + | chr6.4:19163250-19163269 | None:intergenic | 50.0% | |
| CGGCGCTTCTTTGATCCAAA+AGG | - | chr6.4:19163586-19163605 | MS.gene41950:CDS | 50.0% | |
| CGTGGCACTTCATGACTTCA+TGG | - | chr6.4:19163021-19163040 | MS.gene41950:intron | 50.0% | |
| CTTGCCTCACCTTTGACTGA+TGG | + | chr6.4:19163254-19163273 | None:intergenic | 50.0% | |
| GAATGGTTGGGCTGTTGTGA+TGG | + | chr6.4:19163069-19163088 | None:intergenic | 50.0% | |
| GGGAAGGTTGGAGCAAGATA+AGG | - | chr6.4:19163883-19163902 | MS.gene41950:CDS | 50.0% | |
| TACCAAACCCTTCCATCGGA+CGG | - | chr6.4:19163341-19163360 | MS.gene41950:intron | 50.0% | |
| TCCTTGATGGAACATCCACG+TGG | - | chr6.4:19163003-19163022 | MS.gene41950:intron | 50.0% | |
| TGAGGCAAGGCCCATACTTA+GGG | - | chr6.4:19163265-19163284 | MS.gene41950:intron | 50.0% | |
| TGTATCCAGGCAAGAGTGGA+GGG | - | chr6.4:19163819-19163838 | MS.gene41950:CDS | 50.0% | |
| TTGTATCCAGGCAAGAGTGG+AGG | - | chr6.4:19163818-19163837 | MS.gene41950:CDS | 50.0% | |
| ! | CTCACCTTTGACTGATGGTG+GGG | + | chr6.4:19163249-19163268 | None:intergenic | 50.0% |
| ! | TAGACCCTTGTTGGCTGTTC+AGG | - | chr6.4:19160597-19160616 | MS.gene41950:CDS | 50.0% |
| ! | TGAAGTCATGAAGTGCCACG+TGG | + | chr6.4:19163021-19163040 | None:intergenic | 50.0% |
| ! | TTTGCCTCACCATTGGCTGA+TGG | + | chr6.4:19163209-19163228 | None:intergenic | 50.0% |
| !! | AAAGAAGCGCCGAATTGTGG+CGG | + | chr6.4:19163578-19163597 | None:intergenic | 50.0% |
| !! | ACCTCACCATTGGTTGATGG+TGG | + | chr6.4:19163161-19163180 | None:intergenic | 50.0% |
| !! | CACCATTGGTTGATGGTGGT+GGG | + | chr6.4:19163157-19163176 | None:intergenic | 50.0% |
| !! | TCACCATTGGTTGATGGTGG+TGG | + | chr6.4:19163158-19163177 | None:intergenic | 50.0% |
| !! | TCACCTTTGACTGATGGTGG+GGG | + | chr6.4:19163248-19163267 | None:intergenic | 50.0% |
| !!! | CGGGTTTTAGTTCACGTGCA+AGG | + | chr6.4:19163424-19163443 | None:intergenic | 50.0% |
| AACCGTCCGATGGAAGGGTT+TGG | + | chr6.4:19163346-19163365 | None:intergenic | 55.0% | |
| ACGAGTGAACCCACCAATGC+CGG | - | chr6.4:19163484-19163503 | MS.gene41950:CDS | 55.0% | |
| AGCACCATCAGCCAATGGTG+AGG | - | chr6.4:19163202-19163221 | MS.gene41950:intron | 55.0% | |
| CACGTGGCGCCAAATATGAG+TGG | + | chr6.4:19163399-19163418 | None:intergenic | 55.0% | |
| CCAAAGTATGCCTCCGGCAT+TGG | + | chr6.4:19163500-19163519 | None:intergenic | 55.0% | |
| CCCACCATCAGTCAAAGGTG+AGG | - | chr6.4:19163247-19163266 | MS.gene41950:intron | 55.0% | |
| GAGGCAAAGGTTGAACCCGA+AGG | - | chr6.4:19163221-19163240 | MS.gene41950:intron | 55.0% | |
| GCCACGTGGATGTTCCATCA+AGG | + | chr6.4:19163007-19163026 | None:intergenic | 55.0% | |
| GCCTCACCTTTGACTGATGG+TGG | + | chr6.4:19163251-19163270 | None:intergenic | 55.0% | |
| GGGTCCACCACTGCATATCT+CGG | + | chr6.4:19163048-19163067 | None:intergenic | 55.0% | |
| GTGAGGCAAGGCCCATACTT+AGG | - | chr6.4:19163264-19163283 | MS.gene41950:intron | 55.0% | |
| TCATGGGCCGAGATATGCAG+TGG | - | chr6.4:19163038-19163057 | MS.gene41950:intron | 55.0% | |
| TCCAACCTTCCCATAGCCTC+AGG | + | chr6.4:19163875-19163894 | None:intergenic | 55.0% | |
| ! | AAGTATGCCTCCGGCATTGG+TGG | + | chr6.4:19163497-19163516 | None:intergenic | 55.0% |
| ! | CACCATTGGCTGATGGTGCT+GGG | + | chr6.4:19163202-19163221 | None:intergenic | 55.0% |
| ! | CCAATGCCGGAGGCATACTT+TGG | - | chr6.4:19163497-19163516 | MS.gene41950:CDS | 55.0% |
| ! | TCACCATTGGCTGATGGTGC+TGG | + | chr6.4:19163203-19163222 | None:intergenic | 55.0% |
| ! | TGTTACGGCTGCTGGGCTTT+TGG | - | chr6.4:19163544-19163563 | MS.gene41950:CDS | 55.0% |
| !! | AAGAAGCGCCGAATTGTGGC+GGG | + | chr6.4:19163577-19163596 | None:intergenic | 55.0% |
| !! | AGATGGGCTAGCAATGGGCT+TGG | - | chr6.4:19162965-19162984 | MS.gene41950:intron | 55.0% |
| !! | AGTATGCCTCCGGCATTGGT+GGG | + | chr6.4:19163496-19163515 | None:intergenic | 55.0% |
| !! | GTTGATGGTGGTGGGCCTTT+GGG | + | chr6.4:19163149-19163168 | None:intergenic | 55.0% |
| AGTGAACCCACCAATGCCGG+AGG | - | chr6.4:19163487-19163506 | MS.gene41950:CDS | 60.0% | |
| ATCCAGGCAAGAGTGGAGGG+AGG | - | chr6.4:19163822-19163841 | MS.gene41950:CDS | 60.0% | |
| CACACGTGTGTTTCGGGCCT+TGG | + | chr6.4:19163102-19163121 | None:intergenic | 60.0% | |
| GCCTGAGGCTATGGGAAGGT+TGG | - | chr6.4:19163871-19163890 | MS.gene41950:CDS | 60.0% | |
| GGCCCACCACCATCAACCAA+TGG | - | chr6.4:19163152-19163171 | MS.gene41950:intron | 60.0% | |
| GGTCCCCCACCATCAGTCAA+AGG | - | chr6.4:19163242-19163261 | MS.gene41950:intron | 60.0% | |
| GTTCACGTGCAAGGCTCACG+TGG | + | chr6.4:19163415-19163434 | None:intergenic | 60.0% | |
| TGGAGCCTGAGGCTATGGGA+AGG | - | chr6.4:19163867-19163886 | MS.gene41950:CDS | 60.0% | |
| TGGGCCGAGATATGCAGTGG+TGG | - | chr6.4:19163041-19163060 | MS.gene41950:intron | 60.0% | |
| ! | TACGGCTGCTGGGCTTTTGG+CGG | - | chr6.4:19163547-19163566 | MS.gene41950:CDS | 60.0% |
| !! | ACTGATGGTGGGGGACCTTC+GGG | + | chr6.4:19163239-19163258 | None:intergenic | 60.0% |
| !! | GACTGATGGTGGGGGACCTT+CGG | + | chr6.4:19163240-19163259 | None:intergenic | 60.0% |
| !! | GGTTGATGGTGGTGGGCCTT+TGG | + | chr6.4:19163150-19163169 | None:intergenic | 60.0% |
| CTCCTCCCTCCACTCTTGCC+TGG | + | chr6.4:19163827-19163846 | None:intergenic | 65.0% | |
| CTCTCCCTACCCGAGCCCAA+AGG | - | chr6.4:19163131-19163150 | MS.gene41950:intron | 65.0% | |
| CTTTGGGCTCGGGTAGGGAG+AGG | + | chr6.4:19163133-19163152 | None:intergenic | 65.0% | |
| GCGGCTCACCCGCCACAATT+CGG | - | chr6.4:19163566-19163585 | MS.gene41950:CDS | 65.0% | |
| GGCCCAGCACCATCAGCCAA+TGG | - | chr6.4:19163197-19163216 | MS.gene41950:intron | 65.0% | |
| TGGGCCTTTGGGCTCGGGTA+GGG | + | chr6.4:19163138-19163157 | None:intergenic | 65.0% | |
| !! | TGGTGGTGGGCCTTTGGGCT+CGG | + | chr6.4:19163144-19163163 | None:intergenic | 65.0% |
| GTGGGCCTTTGGGCTCGGGT+AGG | + | chr6.4:19163139-19163158 | None:intergenic | 70.0% | |
| !! | GGTGGTGGGCCTTTGGGCTC+GGG | + | chr6.4:19163143-19163162 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 19160169 | 19163925 | 19160169 | ID=MS.gene41950 |
| chr6.4 | mRNA | 19160169 | 19163925 | 19160169 | ID=MS.gene41950.t1;Parent=MS.gene41950 |
| chr6.4 | exon | 19163476 | 19163925 | 19163476 | ID=MS.gene41950.t1.exon1;Parent=MS.gene41950.t1 |
| chr6.4 | CDS | 19163476 | 19163925 | 19163476 | ID=cds.MS.gene41950.t1;Parent=MS.gene41950.t1 |
| chr6.4 | exon | 19160169 | 19161143 | 19160169 | ID=MS.gene41950.t1.exon2;Parent=MS.gene41950.t1 |
| chr6.4 | CDS | 19160169 | 19161143 | 19160169 | ID=cds.MS.gene41950.t1;Parent=MS.gene41950.t1 |
| Gene Sequence |
| Protein sequence |
