Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50869.t1 | XP_013459064.1 | 98.1 | 1038 | 20 | 0 | 1 | 1038 | 1 | 1038 | 0.00E+00 | 1619 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50869.t1 | Q8VY00 | 71.6 | 1042 | 280 | 6 | 1 | 1038 | 1 | 1030 | 0.0e+00 | 1348.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50869.t1 | A0A072UU00 | 98.1 | 1038 | 20 | 0 | 1 | 1038 | 1 | 1038 | 0.0e+00 | 1619.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene50869 | 0.855524 | 5.96E-62 | -1.69E-46 |
| MS.gene049159 | MS.gene50869 | 0.846892 | 1.63E-59 | -1.69E-46 |
| MS.gene049254 | MS.gene50869 | 0.820189 | 7.82E-53 | -1.69E-46 |
| MS.gene049368 | MS.gene50869 | 0.803361 | 3.62E-49 | -1.69E-46 |
| MS.gene049435 | MS.gene50869 | 0.851102 | 1.10E-60 | -1.69E-46 |
| MS.gene049501 | MS.gene50869 | 0.809091 | 2.25E-50 | -1.69E-46 |
| MS.gene049585 | MS.gene50869 | 0.824225 | 9.06E-54 | -1.69E-46 |
| MS.gene049711 | MS.gene50869 | 0.822134 | 2.79E-53 | -1.69E-46 |
| MS.gene049850 | MS.gene50869 | 0.880361 | 5.85E-70 | -1.69E-46 |
| MS.gene050156 | MS.gene50869 | 0.8044 | 2.20E-49 | -1.69E-46 |
| MS.gene050355 | MS.gene50869 | 0.800039 | 1.74E-48 | -1.69E-46 |
| MS.gene050442 | MS.gene50869 | 0.847373 | 1.21E-59 | -1.69E-46 |
| MS.gene050551 | MS.gene50869 | 0.804552 | 2.04E-49 | -1.69E-46 |
| MS.gene050561 | MS.gene50869 | 0.807423 | 5.09E-50 | -1.69E-46 |
| MS.gene050562 | MS.gene50869 | 0.803352 | 3.63E-49 | -1.69E-46 |
| MS.gene050657 | MS.gene50869 | 0.823589 | 1.28E-53 | -1.69E-46 |
| MS.gene050719 | MS.gene50869 | 0.808864 | 2.51E-50 | -1.69E-46 |
| MS.gene050721 | MS.gene50869 | 0.803109 | 4.08E-49 | -1.69E-46 |
| MS.gene050759 | MS.gene50869 | 0.810699 | 1.01E-50 | -1.69E-46 |
| MS.gene050780 | MS.gene50869 | 0.801284 | 9.68E-49 | -1.69E-46 |
| MS.gene050959 | MS.gene50869 | 0.811434 | 7.01E-51 | -1.69E-46 |
| MS.gene050962 | MS.gene50869 | 0.800723 | 1.26E-48 | -1.69E-46 |
| MS.gene051147 | MS.gene50869 | 0.839415 | 1.61E-57 | -1.69E-46 |
| MS.gene051198 | MS.gene50869 | 0.837456 | 5.14E-57 | -1.69E-46 |
| MS.gene051210 | MS.gene50869 | 0.822296 | 2.56E-53 | -1.69E-46 |
| MS.gene051247 | MS.gene50869 | 0.824936 | 6.16E-54 | -1.69E-46 |
| MS.gene051279 | MS.gene50869 | 0.826696 | 2.35E-54 | -1.69E-46 |
| MS.gene051332 | MS.gene50869 | 0.814294 | 1.66E-51 | -1.69E-46 |
| MS.gene051490 | MS.gene50869 | 0.8068 | 6.90E-50 | -1.69E-46 |
| MS.gene05157 | MS.gene50869 | 0.816804 | 4.58E-52 | -1.69E-46 |
| MS.gene051719 | MS.gene50869 | 0.824864 | 6.40E-54 | -1.69E-46 |
| MS.gene051720 | MS.gene50869 | 0.825634 | 4.21E-54 | -1.69E-46 |
| MS.gene051744 | MS.gene50869 | 0.860749 | 1.66E-63 | -1.69E-46 |
| MS.gene051800 | MS.gene50869 | 0.863962 | 1.71E-64 | -1.69E-46 |
| MS.gene052020 | MS.gene50869 | 0.84971 | 2.71E-60 | -1.69E-46 |
| MS.gene052323 | MS.gene50869 | 0.827047 | 1.94E-54 | -1.69E-46 |
| MS.gene052463 | MS.gene50869 | 0.827391 | 1.61E-54 | -1.69E-46 |
| MS.gene052516 | MS.gene50869 | 0.844222 | 8.64E-59 | -1.69E-46 |
| MS.gene052519 | MS.gene50869 | 0.802641 | 5.09E-49 | -1.69E-46 |
| MS.gene052582 | MS.gene50869 | 0.82944 | 5.14E-55 | -1.69E-46 |
| MS.gene052584 | MS.gene50869 | 0.832463 | 9.32E-56 | -1.69E-46 |
| MS.gene052609 | MS.gene50869 | 0.830781 | 2.42E-55 | -1.69E-46 |
| MS.gene052611 | MS.gene50869 | 0.828648 | 8.00E-55 | -1.69E-46 |
| MS.gene052612 | MS.gene50869 | 0.807719 | 4.41E-50 | -1.69E-46 |
| MS.gene052773 | MS.gene50869 | 0.833273 | 5.86E-56 | -1.69E-46 |
| MS.gene052863 | MS.gene50869 | 0.835021 | 2.14E-56 | -1.69E-46 |
| MS.gene052896 | MS.gene50869 | 0.841715 | 4.02E-58 | -1.69E-46 |
| MS.gene053008 | MS.gene50869 | 0.813623 | 2.33E-51 | -1.69E-46 |
| MS.gene053079 | MS.gene50869 | 0.835963 | 1.24E-56 | -1.69E-46 |
| MS.gene053226 | MS.gene50869 | 0.859199 | 4.88E-63 | -1.69E-46 |
| MS.gene053296 | MS.gene50869 | 0.823552 | 1.30E-53 | -1.69E-46 |
| MS.gene053621 | MS.gene50869 | 0.809967 | 1.46E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene50869 | 0.805575 | 1.25E-49 | -1.69E-46 |
| MS.gene053998 | MS.gene50869 | 0.832255 | 1.05E-55 | -1.69E-46 |
| MS.gene05414 | MS.gene50869 | 0.836481 | 9.12E-57 | -1.69E-46 |
| MS.gene05415 | MS.gene50869 | 0.837654 | 4.57E-57 | -1.69E-46 |
| MS.gene054236 | MS.gene50869 | 0.827894 | 1.22E-54 | -1.69E-46 |
| MS.gene05423 | MS.gene50869 | 0.819301 | 1.25E-52 | -1.69E-46 |
| MS.gene054291 | MS.gene50869 | -0.812842 | 3.46E-51 | -1.69E-46 |
| MS.gene054467 | MS.gene50869 | 0.848256 | 6.88E-60 | -1.69E-46 |
| MS.gene054468 | MS.gene50869 | 0.815392 | 9.47E-52 | -1.69E-46 |
| MS.gene054472 | MS.gene50869 | 0.800249 | 1.57E-48 | -1.69E-46 |
| MS.gene054576 | MS.gene50869 | 0.807322 | 5.35E-50 | -1.69E-46 |
| MS.gene054584 | MS.gene50869 | 0.807057 | 6.09E-50 | -1.69E-46 |
| MS.gene05458 | MS.gene50869 | 0.806111 | 9.64E-50 | -1.69E-46 |
| MS.gene054651 | MS.gene50869 | 0.82657 | 2.52E-54 | -1.69E-46 |
| MS.gene05468 | MS.gene50869 | 0.80376 | 2.99E-49 | -1.69E-46 |
| MS.gene054775 | MS.gene50869 | 0.82503 | 5.85E-54 | -1.69E-46 |
| MS.gene054991 | MS.gene50869 | 0.80563 | 1.22E-49 | -1.69E-46 |
| MS.gene055166 | MS.gene50869 | 0.809502 | 1.83E-50 | -1.69E-46 |
| MS.gene055227 | MS.gene50869 | 0.813675 | 2.27E-51 | -1.69E-46 |
| MS.gene055313 | MS.gene50869 | 0.830858 | 2.32E-55 | -1.69E-46 |
| MS.gene055465 | MS.gene50869 | 0.843303 | 1.52E-58 | -1.69E-46 |
| MS.gene055466 | MS.gene50869 | 0.834438 | 3.00E-56 | -1.69E-46 |
| MS.gene055468 | MS.gene50869 | 0.807705 | 4.44E-50 | -1.69E-46 |
| MS.gene055469 | MS.gene50869 | 0.824104 | 9.67E-54 | -1.69E-46 |
| MS.gene055512 | MS.gene50869 | 0.813549 | 2.42E-51 | -1.69E-46 |
| MS.gene055513 | MS.gene50869 | 0.800745 | 1.25E-48 | -1.69E-46 |
| MS.gene055586 | MS.gene50869 | 0.802421 | 5.66E-49 | -1.69E-46 |
| MS.gene055778 | MS.gene50869 | 0.811607 | 6.43E-51 | -1.69E-46 |
| MS.gene055818 | MS.gene50869 | 0.82935 | 5.41E-55 | -1.69E-46 |
| MS.gene055864 | MS.gene50869 | 0.821697 | 3.52E-53 | -1.69E-46 |
| MS.gene055926 | MS.gene50869 | 0.840219 | 9.92E-58 | -1.69E-46 |
| MS.gene05604 | MS.gene50869 | 0.837967 | 3.80E-57 | -1.69E-46 |
| MS.gene056050 | MS.gene50869 | 0.831347 | 1.76E-55 | -1.69E-46 |
| MS.gene056162 | MS.gene50869 | 0.814361 | 1.60E-51 | -1.69E-46 |
| MS.gene056173 | MS.gene50869 | 0.815422 | 9.32E-52 | -1.69E-46 |
| MS.gene056174 | MS.gene50869 | 0.851128 | 1.09E-60 | -1.69E-46 |
| MS.gene056308 | MS.gene50869 | 0.827577 | 1.45E-54 | -1.69E-46 |
| MS.gene056507 | MS.gene50869 | 0.837816 | 4.16E-57 | -1.69E-46 |
| MS.gene056553 | MS.gene50869 | 0.805615 | 1.23E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene50869 | 0.82653 | 2.58E-54 | -1.69E-46 |
| MS.gene05690 | MS.gene50869 | 0.809807 | 1.58E-50 | -1.69E-46 |
| MS.gene057026 | MS.gene50869 | 0.817797 | 2.74E-52 | -1.69E-46 |
| MS.gene057314 | MS.gene50869 | 0.866836 | 2.13E-65 | -1.69E-46 |
| MS.gene057360 | MS.gene50869 | 0.821252 | 4.46E-53 | -1.69E-46 |
| MS.gene057444 | MS.gene50869 | 0.81879 | 1.63E-52 | -1.69E-46 |
| MS.gene057446 | MS.gene50869 | 0.814942 | 1.19E-51 | -1.69E-46 |
| MS.gene057598 | MS.gene50869 | 0.816927 | 4.30E-52 | -1.69E-46 |
| MS.gene057855 | MS.gene50869 | 0.818199 | 2.22E-52 | -1.69E-46 |
| MS.gene057869 | MS.gene50869 | 0.849239 | 3.67E-60 | -1.69E-46 |
| MS.gene057915 | MS.gene50869 | 0.96801 | 4.51E-128 | -1.69E-46 |
| MS.gene057978 | MS.gene50869 | 0.823883 | 1.09E-53 | -1.69E-46 |
| MS.gene058010 | MS.gene50869 | 0.844977 | 5.41E-59 | -1.69E-46 |
| MS.gene058081 | MS.gene50869 | 0.800282 | 1.55E-48 | -1.69E-46 |
| MS.gene058214 | MS.gene50869 | 0.821259 | 4.44E-53 | -1.69E-46 |
| MS.gene058289 | MS.gene50869 | 0.83073 | 2.49E-55 | -1.69E-46 |
| MS.gene058625 | MS.gene50869 | 0.842733 | 2.16E-58 | -1.69E-46 |
| MS.gene058636 | MS.gene50869 | 0.824564 | 7.54E-54 | -1.69E-46 |
| MS.gene058647 | MS.gene50869 | 0.819953 | 8.86E-53 | -1.69E-46 |
| MS.gene058668 | MS.gene50869 | 0.821302 | 4.34E-53 | -1.69E-46 |
| MS.gene058829 | MS.gene50869 | 0.820626 | 6.21E-53 | -1.69E-46 |
| MS.gene058919 | MS.gene50869 | 0.835585 | 1.54E-56 | -1.69E-46 |
| MS.gene058979 | MS.gene50869 | 0.857136 | 2.00E-62 | -1.69E-46 |
| MS.gene05897 | MS.gene50869 | 0.828327 | 9.56E-55 | -1.69E-46 |
| MS.gene059272 | MS.gene50869 | 0.806896 | 6.58E-50 | -1.69E-46 |
| MS.gene059283 | MS.gene50869 | 0.836145 | 1.11E-56 | -1.69E-46 |
| MS.gene059331 | MS.gene50869 | 0.818768 | 1.65E-52 | -1.69E-46 |
| MS.gene059335 | MS.gene50869 | 0.81827 | 2.14E-52 | -1.69E-46 |
| MS.gene059439 | MS.gene50869 | 0.810085 | 1.37E-50 | -1.69E-46 |
| MS.gene059570 | MS.gene50869 | 0.833914 | 4.06E-56 | -1.69E-46 |
| MS.gene059625 | MS.gene50869 | 0.838132 | 3.45E-57 | -1.69E-46 |
| MS.gene059725 | MS.gene50869 | 0.852573 | 4.22E-61 | -1.69E-46 |
| MS.gene05973 | MS.gene50869 | 0.816323 | 5.87E-52 | -1.69E-46 |
| MS.gene059842 | MS.gene50869 | 0.824109 | 9.64E-54 | -1.69E-46 |
| MS.gene060011 | MS.gene50869 | 0.804556 | 2.04E-49 | -1.69E-46 |
| MS.gene060167 | MS.gene50869 | 0.833146 | 6.31E-56 | -1.69E-46 |
| MS.gene060373 | MS.gene50869 | 0.811924 | 5.49E-51 | -1.69E-46 |
| MS.gene060380 | MS.gene50869 | 0.816262 | 6.06E-52 | -1.69E-46 |
| MS.gene060521 | MS.gene50869 | 0.807493 | 4.92E-50 | -1.69E-46 |
| MS.gene06052 | MS.gene50869 | 0.859685 | 3.49E-63 | -1.69E-46 |
| MS.gene060587 | MS.gene50869 | 0.803642 | 3.16E-49 | -1.69E-46 |
| MS.gene060637 | MS.gene50869 | 0.810579 | 1.07E-50 | -1.69E-46 |
| MS.gene060777 | MS.gene50869 | 0.819024 | 1.44E-52 | -1.69E-46 |
| MS.gene060802 | MS.gene50869 | 0.801431 | 9.03E-49 | -1.69E-46 |
| MS.gene060803 | MS.gene50869 | 0.828396 | 9.20E-55 | -1.69E-46 |
| MS.gene060998 | MS.gene50869 | 0.802167 | 6.38E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene50869 | MS.gene015907 | PPI |
| MS.gene95208 | MS.gene50869 | PPI |
| MS.gene86309 | MS.gene50869 | PPI |
| MS.gene54084 | MS.gene50869 | PPI |
| MS.gene51818 | MS.gene50869 | PPI |
| MS.gene057915 | MS.gene50869 | PPI |
| MS.gene021588 | MS.gene50869 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50869.t1 | MTR_3g023880 | 98.940 | 1038 | 11 | 0 | 1 | 1038 | 1 | 1038 | 0.0 | 2125 |
| MS.gene50869.t1 | MTR_6g061840 | 73.932 | 913 | 198 | 12 | 131 | 1037 | 4 | 882 | 0.0 | 1356 |
| MS.gene50869.t1 | MTR_5g075310 | 73.981 | 834 | 157 | 8 | 212 | 1038 | 15 | 795 | 0.0 | 1257 |
| MS.gene50869.t1 | MTR_6g061840 | 73.367 | 796 | 172 | 12 | 131 | 920 | 4 | 765 | 0.0 | 1162 |
| MS.gene50869.t1 | MTR_8g041990 | 64.247 | 744 | 110 | 12 | 275 | 1011 | 2 | 596 | 0.0 | 905 |
| MS.gene50869.t1 | MTR_6g061840 | 72.213 | 619 | 134 | 11 | 129 | 743 | 2 | 586 | 0.0 | 865 |
| MS.gene50869.t1 | MTR_1g023985 | 57.528 | 631 | 266 | 2 | 404 | 1034 | 562 | 1190 | 0.0 | 804 |
| MS.gene50869.t1 | MTR_1g114490 | 56.863 | 612 | 262 | 2 | 423 | 1034 | 512 | 1121 | 0.0 | 775 |
| MS.gene50869.t1 | MTR_1g086640 | 53.870 | 646 | 276 | 9 | 407 | 1034 | 52 | 693 | 0.0 | 717 |
| MS.gene50869.t1 | MTR_2g098440 | 49.561 | 684 | 331 | 6 | 369 | 1040 | 522 | 1203 | 0.0 | 709 |
| MS.gene50869.t1 | MTR_3g054400 | 49.614 | 647 | 318 | 4 | 400 | 1040 | 356 | 1000 | 0.0 | 697 |
| MS.gene50869.t1 | MTR_3g052610 | 50.520 | 673 | 280 | 11 | 407 | 1032 | 49 | 715 | 0.0 | 678 |
| MS.gene50869.t1 | MTR_4g485610 | 52.951 | 610 | 267 | 9 | 442 | 1034 | 49 | 655 | 0.0 | 660 |
| MS.gene50869.t1 | MTR_1g010030 | 86.667 | 405 | 40 | 2 | 1 | 405 | 1 | 391 | 0.0 | 627 |
| MS.gene50869.t1 | MTR_1g010030 | 86.667 | 405 | 40 | 2 | 1 | 405 | 1 | 391 | 0.0 | 626 |
| MS.gene50869.t1 | MTR_1g010030 | 67.021 | 94 | 24 | 1 | 946 | 1039 | 411 | 497 | 7.87e-30 | 125 |
| MS.gene50869.t1 | MTR_2g015320 | 45.967 | 657 | 320 | 9 | 405 | 1033 | 46 | 695 | 0.0 | 617 |
| MS.gene50869.t1 | MTR_7g095080 | 45.190 | 686 | 315 | 8 | 407 | 1034 | 43 | 725 | 0.0 | 613 |
| MS.gene50869.t1 | MTR_8g080240 | 45.526 | 637 | 318 | 13 | 412 | 1025 | 4 | 634 | 0.0 | 561 |
| MS.gene50869.t1 | MTR_8g080240 | 45.526 | 637 | 318 | 13 | 412 | 1025 | 4 | 634 | 0.0 | 559 |
| MS.gene50869.t1 | MTR_8g080240 | 46.193 | 591 | 293 | 12 | 412 | 983 | 4 | 588 | 8.75e-174 | 521 |
| MS.gene50869.t1 | MTR_4g094992 | 43.137 | 510 | 266 | 6 | 546 | 1034 | 13 | 519 | 1.08e-140 | 433 |
| MS.gene50869.t1 | MTR_3g014030 | 35.328 | 685 | 377 | 18 | 381 | 1027 | 243 | 899 | 3.84e-110 | 377 |
| MS.gene50869.t1 | MTR_3g086770 | 36.210 | 649 | 366 | 16 | 412 | 1027 | 266 | 899 | 7.05e-108 | 370 |
| MS.gene50869.t1 | MTR_0267s0070 | 35.331 | 634 | 358 | 16 | 430 | 1027 | 937 | 1554 | 2.08e-99 | 346 |
| MS.gene50869.t1 | MTR_1543s0010 | 50.370 | 270 | 132 | 2 | 650 | 919 | 11 | 278 | 1.05e-86 | 282 |
| MS.gene50869.t1 | MTR_1g109170 | 28.194 | 720 | 430 | 19 | 388 | 1023 | 305 | 1021 | 1.83e-70 | 257 |
| MS.gene50869.t1 | MTR_1g109170 | 28.194 | 720 | 430 | 19 | 388 | 1023 | 305 | 1021 | 1.88e-70 | 257 |
| MS.gene50869.t1 | MTR_3g055020 | 47.345 | 226 | 117 | 2 | 707 | 932 | 44 | 267 | 3.69e-67 | 233 |
| MS.gene50869.t1 | MTR_1g056490 | 35.068 | 442 | 259 | 12 | 604 | 1023 | 487 | 922 | 6.71e-57 | 214 |
| MS.gene50869.t1 | MTR_1g056490 | 43.689 | 206 | 112 | 1 | 394 | 595 | 213 | 418 | 3.30e-44 | 174 |
| MS.gene50869.t1 | MTR_4g023590 | 39.924 | 263 | 125 | 4 | 405 | 634 | 265 | 527 | 9.62e-53 | 202 |
| MS.gene50869.t1 | MTR_4g023590 | 30.043 | 466 | 232 | 11 | 654 | 1026 | 692 | 1156 | 3.64e-47 | 184 |
| MS.gene50869.t1 | MTR_8g045110 | 29.882 | 425 | 272 | 14 | 608 | 1015 | 101 | 516 | 4.86e-51 | 191 |
| MS.gene50869.t1 | MTR_8g106630 | 28.507 | 442 | 290 | 11 | 602 | 1023 | 533 | 968 | 4.33e-50 | 194 |
| MS.gene50869.t1 | MTR_8g106630 | 44.949 | 198 | 105 | 1 | 402 | 595 | 263 | 460 | 3.43e-43 | 171 |
| MS.gene50869.t1 | MTR_8g044260 | 29.099 | 433 | 283 | 12 | 602 | 1015 | 508 | 935 | 1.68e-48 | 188 |
| MS.gene50869.t1 | MTR_8g044260 | 47.150 | 193 | 98 | 1 | 407 | 595 | 244 | 436 | 7.09e-42 | 167 |
| MS.gene50869.t1 | MTR_4g134790 | 29.375 | 480 | 267 | 12 | 602 | 1012 | 885 | 1361 | 2.83e-48 | 188 |
| MS.gene50869.t1 | MTR_4g134790 | 40.500 | 200 | 106 | 4 | 409 | 595 | 602 | 801 | 4.91e-36 | 149 |
| MS.gene50869.t1 | MTR_4g134790 | 29.375 | 480 | 267 | 12 | 602 | 1012 | 888 | 1364 | 2.84e-48 | 188 |
| MS.gene50869.t1 | MTR_4g134790 | 40.500 | 200 | 106 | 4 | 409 | 595 | 602 | 801 | 4.79e-36 | 149 |
| MS.gene50869.t1 | MTR_1g088590 | 30.625 | 480 | 268 | 14 | 405 | 832 | 23 | 489 | 6.59e-45 | 177 |
| MS.gene50869.t1 | MTR_5g090430 | 29.877 | 405 | 261 | 9 | 621 | 1005 | 554 | 955 | 3.34e-44 | 175 |
| MS.gene50869.t1 | MTR_5g090430 | 37.000 | 200 | 113 | 2 | 409 | 595 | 184 | 383 | 8.62e-37 | 151 |
| MS.gene50869.t1 | MTR_5g090430 | 29.877 | 405 | 261 | 9 | 621 | 1005 | 441 | 842 | 7.35e-44 | 173 |
| MS.gene50869.t1 | MTR_5g090430 | 37.000 | 200 | 113 | 2 | 409 | 595 | 71 | 270 | 1.03e-36 | 150 |
| MS.gene50869.t1 | MTR_4g120070 | 47.340 | 188 | 99 | 0 | 654 | 841 | 618 | 805 | 5.08e-43 | 171 |
| MS.gene50869.t1 | MTR_4g120070 | 33.761 | 234 | 98 | 5 | 458 | 634 | 220 | 453 | 3.29e-30 | 130 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50869.t1 | AT1G32490 | 76.488 | 1042 | 229 | 10 | 1 | 1038 | 1 | 1030 | 0.0 | 1629 |
| MS.gene50869.t1 | AT2G35340 | 73.147 | 1039 | 269 | 4 | 1 | 1038 | 1 | 1030 | 0.0 | 1602 |
| MS.gene50869.t1 | AT1G32490 | 75.624 | 1042 | 228 | 11 | 1 | 1038 | 1 | 1020 | 0.0 | 1601 |
| MS.gene50869.t1 | AT2G35340 | 76.682 | 892 | 207 | 1 | 147 | 1038 | 2 | 892 | 0.0 | 1461 |
| MS.gene50869.t1 | AT4G16680 | 68.052 | 770 | 228 | 6 | 272 | 1038 | 6 | 760 | 0.0 | 1095 |
| MS.gene50869.t1 | AT3G26560 | 57.686 | 631 | 265 | 2 | 404 | 1034 | 507 | 1135 | 0.0 | 803 |
| MS.gene50869.t1 | AT4G16680 | 64.685 | 555 | 182 | 3 | 271 | 825 | 84 | 624 | 0.0 | 731 |
| MS.gene50869.t1 | AT5G13010 | 50.731 | 684 | 323 | 6 | 369 | 1040 | 509 | 1190 | 0.0 | 724 |
| MS.gene50869.t1 | AT2G47250 | 52.615 | 650 | 286 | 9 | 407 | 1038 | 60 | 705 | 0.0 | 718 |
| MS.gene50869.t1 | AT3G62310 | 52.308 | 650 | 288 | 8 | 407 | 1038 | 56 | 701 | 0.0 | 716 |
| MS.gene50869.t1 | AT4G18465 | 47.766 | 649 | 315 | 8 | 405 | 1031 | 41 | 687 | 0.0 | 633 |
| MS.gene50869.t1 | AT1G26370 | 44.412 | 689 | 323 | 7 | 400 | 1031 | 29 | 714 | 0.0 | 600 |
| MS.gene50869.t1 | AT3G62310 | 56.962 | 474 | 191 | 2 | 407 | 867 | 56 | 529 | 0.0 | 573 |
| MS.gene50869.t1 | AT3G62310 | 57.602 | 467 | 185 | 2 | 407 | 860 | 56 | 522 | 0.0 | 568 |
| MS.gene50869.t1 | AT1G27900 | 44.984 | 638 | 325 | 12 | 412 | 1025 | 4 | 639 | 0.0 | 563 |
| MS.gene50869.t1 | AT1G27900 | 47.664 | 535 | 271 | 6 | 412 | 938 | 4 | 537 | 5.40e-174 | 520 |
| MS.gene50869.t1 | AT1G27900 | 47.156 | 545 | 279 | 6 | 411 | 947 | 3 | 546 | 1.16e-173 | 520 |
| MS.gene50869.t1 | AT5G10370 | 36.850 | 654 | 361 | 16 | 412 | 1029 | 306 | 943 | 3.90e-112 | 383 |
| MS.gene50869.t1 | AT4G01020 | 36.615 | 650 | 362 | 15 | 412 | 1027 | 303 | 936 | 3.05e-108 | 372 |
| MS.gene50869.t1 | AT1G58050 | 30.720 | 625 | 331 | 15 | 409 | 935 | 594 | 1214 | 1.11e-78 | 283 |
| MS.gene50869.t1 | AT5G14900 | 40.580 | 276 | 154 | 7 | 770 | 1038 | 2 | 274 | 2.28e-64 | 220 |
| MS.gene50869.t1 | AT2G35920 | 34.389 | 442 | 261 | 12 | 604 | 1023 | 427 | 861 | 6.12e-63 | 232 |
| MS.gene50869.t1 | AT2G35920 | 44.554 | 202 | 108 | 2 | 394 | 591 | 152 | 353 | 2.34e-45 | 177 |
| MS.gene50869.t1 | AT2G35920 | 34.389 | 442 | 261 | 12 | 604 | 1023 | 485 | 919 | 7.39e-63 | 232 |
| MS.gene50869.t1 | AT2G35920 | 43.564 | 202 | 110 | 1 | 394 | 591 | 210 | 411 | 2.10e-45 | 178 |
| MS.gene50869.t1 | AT2G35920 | 34.389 | 442 | 261 | 12 | 604 | 1023 | 517 | 951 | 1.59e-62 | 231 |
| MS.gene50869.t1 | AT2G35920 | 43.564 | 202 | 110 | 1 | 394 | 591 | 242 | 443 | 2.77e-45 | 178 |
| MS.gene50869.t1 | AT1G33390 | 31.207 | 439 | 237 | 7 | 652 | 1026 | 645 | 1082 | 1.36e-53 | 205 |
| MS.gene50869.t1 | AT1G33390 | 38.163 | 283 | 141 | 4 | 405 | 653 | 234 | 516 | 1.99e-53 | 204 |
| MS.gene50869.t1 | AT1G33390 | 31.207 | 439 | 237 | 7 | 652 | 1026 | 645 | 1082 | 1.36e-53 | 205 |
| MS.gene50869.t1 | AT1G33390 | 38.163 | 283 | 141 | 4 | 405 | 653 | 234 | 516 | 1.99e-53 | 204 |
| MS.gene50869.t1 | AT2G01130 | 31.667 | 420 | 264 | 11 | 613 | 1015 | 426 | 839 | 2.51e-53 | 203 |
| MS.gene50869.t1 | AT2G01130 | 43.868 | 212 | 115 | 1 | 388 | 595 | 131 | 342 | 8.86e-45 | 176 |
| MS.gene50869.t1 | AT2G01130 | 31.667 | 420 | 264 | 11 | 613 | 1015 | 491 | 904 | 3.12e-53 | 203 |
| MS.gene50869.t1 | AT2G01130 | 43.868 | 212 | 115 | 1 | 388 | 595 | 196 | 407 | 1.23e-44 | 176 |
| MS.gene50869.t1 | AT1G58060 | 30.705 | 482 | 263 | 13 | 602 | 1015 | 895 | 1373 | 7.25e-53 | 203 |
| MS.gene50869.t1 | AT1G58060 | 42.647 | 204 | 97 | 4 | 409 | 595 | 611 | 811 | 3.84e-38 | 155 |
| MS.gene50869.t1 | AT1G48650 | 31.222 | 442 | 277 | 13 | 602 | 1023 | 558 | 992 | 6.43e-50 | 193 |
| MS.gene50869.t1 | AT1G48650 | 46.305 | 203 | 101 | 2 | 409 | 607 | 296 | 494 | 1.61e-44 | 176 |
| MS.gene50869.t1 | AT1G48650 | 31.222 | 442 | 277 | 13 | 602 | 1023 | 558 | 992 | 7.22e-50 | 193 |
| MS.gene50869.t1 | AT1G48650 | 46.305 | 203 | 101 | 2 | 409 | 607 | 296 | 494 | 1.68e-44 | 176 |
| MS.gene50869.t1 | AT1G06670 | 34.140 | 372 | 223 | 10 | 621 | 975 | 576 | 942 | 9.26e-47 | 184 |
| MS.gene50869.t1 | AT1G06670 | 38.197 | 233 | 131 | 5 | 372 | 595 | 178 | 406 | 1.22e-40 | 164 |
| MS.gene50869.t1 | AT1G06670 | 34.140 | 372 | 223 | 10 | 621 | 975 | 576 | 942 | 1.04e-46 | 183 |
| MS.gene50869.t1 | AT1G06670 | 38.197 | 233 | 131 | 5 | 372 | 595 | 178 | 406 | 1.20e-40 | 164 |
| MS.gene50869.t1 | AT5G04895 | 29.561 | 433 | 281 | 13 | 602 | 1015 | 519 | 946 | 1.83e-46 | 182 |
| MS.gene50869.t1 | AT5G04895 | 43.434 | 198 | 108 | 1 | 402 | 595 | 250 | 447 | 1.21e-42 | 170 |
| MS.gene50869.t1 | AT2G30800 | 31.044 | 364 | 229 | 10 | 621 | 967 | 209 | 567 | 1.16e-42 | 169 |
| MS.gene50869.t1 | AT2G30800 | 31.044 | 364 | 229 | 10 | 621 | 967 | 552 | 910 | 1.91e-42 | 169 |
| MS.gene50869.t1 | AT2G30800 | 39.303 | 201 | 116 | 2 | 397 | 591 | 172 | 372 | 4.01e-41 | 165 |
| MS.gene50869.t1 | AT2G47680 | 30.290 | 482 | 268 | 13 | 412 | 841 | 26 | 491 | 1.38e-36 | 150 |
Find 218 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGAGTTGGTTCAAATATTT+TGG | 0.159721 | 3.1:-14386264 | None:intergenic |
| TCATGGTACACAACCCATTT+TGG | 0.168570 | 3.1:-14391817 | None:intergenic |
| CTTGTTGCACTTTGAATTTA+TGG | 0.177526 | 3.1:+14386616 | MS.gene50869:CDS |
| TTCATCCCGATAAGTATAAA+TGG | 0.181615 | 3.1:-14384267 | None:intergenic |
| ACTTGAAGGTTCTCCCAAAA+TGG | 0.205939 | 3.1:+14391803 | MS.gene50869:intron |
| CTGTGGCTATGCAGCGTTAC+AGG | 0.216421 | 3.1:+14382716 | MS.gene50869:CDS |
| AAAGACTCCATTCCTGTCTT+TGG | 0.226123 | 3.1:-14386398 | None:intergenic |
| TTCTTCAGGTCTACAATTCT+TGG | 0.233579 | 3.1:+14387474 | MS.gene50869:intron |
| ACACCATTGTGTTGAATAAT+TGG | 0.239583 | 3.1:-14387504 | None:intergenic |
| ATTCCCTTGGATTCCTGATT+TGG | 0.247538 | 3.1:+14392094 | MS.gene50869:CDS |
| GTGGGAAAGCTAGTGGAGTT+TGG | 0.255200 | 3.1:+14378126 | MS.gene50869:CDS |
| AACTACCCATTTATACTTAT+CGG | 0.264842 | 3.1:+14384261 | MS.gene50869:CDS |
| AGGTTAGTCCTCTGTATTTC+GGG | 0.272230 | 3.1:-14386551 | None:intergenic |
| ATTGCAGATCACGGAGTTAA+AGG | 0.278762 | 3.1:+14391956 | MS.gene50869:intron |
| GTCTGCAGCAGAGGCACTTC+AGG | 0.284935 | 3.1:+14383822 | MS.gene50869:CDS |
| AAGCTCCAGGGCTTTCAATA+AGG | 0.315018 | 3.1:-14386657 | None:intergenic |
| ATTGCTGCTATGCTTTCTAT+TGG | 0.317382 | 3.1:+14386821 | MS.gene50869:CDS |
| TTGATGGCATCTAAATCATT+AGG | 0.318878 | 3.1:-14388039 | None:intergenic |
| TGGGAAAGCTAGTGGAGTTT+GGG | 0.322245 | 3.1:+14378127 | MS.gene50869:CDS |
| ACAACCTTTCGTGCCCCTTC+AGG | 0.326868 | 3.1:-14386284 | None:intergenic |
| GCATGTACTTGTTTATCCTT+TGG | 0.329781 | 3.1:-14386863 | None:intergenic |
| ATGCCTTGATAAAATCAATT+TGG | 0.331127 | 3.1:-14383657 | None:intergenic |
| GCTCCAATATTCAAAATTCC+AGG | 0.332968 | 3.1:+14385993 | MS.gene50869:CDS |
| GAGGTTAGTCCTCTGTATTT+CGG | 0.335416 | 3.1:-14386552 | None:intergenic |
| CTCTGCTGCAGACTTTGCTT+TGG | 0.335546 | 3.1:-14383812 | None:intergenic |
| GATATATTAATATTCCTTAC+TGG | 0.337935 | 3.1:+14386122 | MS.gene50869:CDS |
| GAAACATCATTGACAATTGA+TGG | 0.350686 | 3.1:+14386326 | MS.gene50869:CDS |
| CAATGATGTTTCTGCGATAT+TGG | 0.354022 | 3.1:-14386315 | None:intergenic |
| ATTGTTGGTGAAACCGGTTC+TGG | 0.354130 | 3.1:+14384531 | MS.gene50869:CDS |
| TTGGTAAAGTGTATTTCAAC+TGG | 0.356714 | 3.1:-14386026 | None:intergenic |
| CTTGTAATTGTTGGTGAAAC+CGG | 0.367977 | 3.1:+14384525 | MS.gene50869:CDS |
| AGCCTGATCTGGCAAGTTAT+AGG | 0.373072 | 3.1:+14385421 | MS.gene50869:CDS |
| GCATCTAAGTAGTCAGCTTC+TGG | 0.375050 | 3.1:-14386053 | None:intergenic |
| GATATCCGTGATCAACTTGC+AGG | 0.388001 | 3.1:+14387979 | MS.gene50869:CDS |
| AAGCATCGAACTAGAGGCTT+AGG | 0.390683 | 3.1:+14386179 | MS.gene50869:CDS |
| ATTTCTTGGTGAGCCTGATC+TGG | 0.394262 | 3.1:+14385410 | MS.gene50869:CDS |
| CTCTTCATCTTAACGAATCC+TGG | 0.406068 | 3.1:-14386368 | None:intergenic |
| GGCAAGAATACTTGAAGAAA+AGG | 0.406911 | 3.1:+14380467 | MS.gene50869:CDS |
| AACAGACTCCCGTGCGTTTG+CGG | 0.409712 | 3.1:+14378158 | MS.gene50869:CDS |
| CACCTATAACTTGCCAGATC+AGG | 0.410649 | 3.1:-14385423 | None:intergenic |
| CAGGTCCTGGAAAGTGCTTC+CGG | 0.412484 | 3.1:+14386480 | MS.gene50869:CDS |
| TGGTTGTGAGTACTAGTTCA+TGG | 0.412578 | 3.1:-14391834 | None:intergenic |
| TAATAGGTACTTGTAATTGT+TGG | 0.416084 | 3.1:+14384516 | MS.gene50869:intron |
| TGCATGTAGGTTTGTGTTCG+AGG | 0.416457 | 3.1:+14383633 | MS.gene50869:intron |
| ATGCAACGAGCTGGTCGATC+TGG | 0.416740 | 3.1:+14386452 | MS.gene50869:CDS |
| GGAAAGGCAACACTGAAGTA+TGG | 0.421539 | 3.1:+14383385 | MS.gene50869:intron |
| GCATGGGAGGAACATCAAAT+TGG | 0.423699 | 3.1:+14383255 | MS.gene50869:CDS |
| TTGTGTAGTCTTTCCAGAAC+CGG | 0.423779 | 3.1:-14384544 | None:intergenic |
| GTAGTCAGCTTCTGGTGCTT+TGG | 0.425509 | 3.1:-14386045 | None:intergenic |
| GTTGGTAGGTTGGCATATAT+AGG | 0.428650 | 3.1:-14386230 | None:intergenic |
| CTTGAAGGTTCTCCCAAAAT+GGG | 0.431621 | 3.1:+14391804 | MS.gene50869:intron |
| CATGCCTCTTGCTCAGCAAA+TGG | 0.431805 | 3.1:-14383237 | None:intergenic |
| GTTCACATACATCCTAGTTC+AGG | 0.432906 | 3.1:+14388228 | MS.gene50869:CDS |
| ACTACCCATTTATACTTATC+GGG | 0.434088 | 3.1:+14384262 | MS.gene50869:CDS |
| CAATTTCCTCTTGACCAGTA+AGG | 0.435827 | 3.1:-14386136 | None:intergenic |
| TACAACCGGAAGCACTTTCC+AGG | 0.437952 | 3.1:-14386485 | None:intergenic |
| TGCAATGTTGGCAAGGAAGC+AGG | 0.442741 | 3.1:+14378373 | MS.gene50869:CDS |
| AGATGTTATAGATTTCTTGA+TGG | 0.444028 | 3.1:-14388055 | None:intergenic |
| ATCAAGAAATCTATAACATC+TGG | 0.444421 | 3.1:+14388057 | MS.gene50869:CDS |
| GATGAACAATATCTATTTGA+TGG | 0.445505 | 3.1:+14380700 | MS.gene50869:CDS |
| TCTGAACCACTCTCTTCATC+AGG | 0.446704 | 3.1:-14378724 | None:intergenic |
| TTAAGTGCTTTAAATAAGCT+TGG | 0.448518 | 3.1:+14386689 | MS.gene50869:CDS |
| TACTTCACCAGCTGATTTAG+TGG | 0.452442 | 3.1:+14378107 | MS.gene50869:CDS |
| TTTCGTGCCCCTTCAGGAGT+TGG | 0.453404 | 3.1:-14386278 | None:intergenic |
| CATCGATGCAGGTAATTTCA+AGG | 0.454393 | 3.1:+14378665 | MS.gene50869:intron |
| GAACCTTGAGCAACGCCATA+TGG | 0.458439 | 3.1:-14386928 | None:intergenic |
| TTGCAGTTCCGTTGGTAGGT+TGG | 0.462220 | 3.1:-14386240 | None:intergenic |
| GCTGGTCGATCTGGAAGAAC+AGG | 0.471777 | 3.1:+14386461 | MS.gene50869:CDS |
| AATTGTATGCAGTATACAAC+CGG | 0.472110 | 3.1:-14386499 | None:intergenic |
| TTCAATAAGGCTTCCGCAGG+TGG | 0.473482 | 3.1:-14386644 | None:intergenic |
| AAGTGGAACAGCGTGAGTTA+AGG | 0.473874 | 3.1:+14380737 | MS.gene50869:CDS |
| CAAAGCAAAGTCTGCAGCAG+AGG | 0.477432 | 3.1:+14383813 | MS.gene50869:CDS |
| AAGATCTAATGCTGCAGAGC+AGG | 0.478672 | 3.1:+14379803 | MS.gene50869:CDS |
| GTGTTATGAAAATTATATAC+AGG | 0.478728 | 3.1:+14387523 | MS.gene50869:CDS |
| GCTGTTTCAGAAAGTATTCA+CGG | 0.479212 | 3.1:+14380446 | MS.gene50869:intron |
| TATCGTCACCACCAACAGTA+TGG | 0.480268 | 3.1:-14378439 | None:intergenic |
| ATCCATGTTACTCAAGCTCC+TGG | 0.480922 | 3.1:+14386098 | MS.gene50869:CDS |
| GATAAGTTGATGTCACTACT+TGG | 0.483743 | 3.1:+14377919 | MS.gene50869:CDS |
| CGATCTGGAAGAACAGGTCC+TGG | 0.487532 | 3.1:+14386467 | MS.gene50869:CDS |
| AAGGAAAGAAAGGGAAAGAC+AGG | 0.488070 | 3.1:+14378684 | MS.gene50869:CDS |
| ATAAAGTATGTCATTGATCC+AGG | 0.488685 | 3.1:+14386350 | MS.gene50869:CDS |
| CCTTCTTGATCATAAGCGTC+TGG | 0.490051 | 3.1:-14382667 | None:intergenic |
| GATTGAAAGATCAAAGAGAA+AGG | 0.490071 | 3.1:+14379129 | MS.gene50869:CDS |
| AGGTAATTTCAAGGAAAGAA+AGG | 0.490695 | 3.1:+14378674 | MS.gene50869:intron |
| AGGAATATTAATATATCTCC+AGG | 0.491393 | 3.1:-14386116 | None:intergenic |
| ATGTTACTGAGGGAATTTCT+TGG | 0.491603 | 3.1:+14385396 | MS.gene50869:CDS |
| AAATTTCTTCCGCAAACGCA+CGG | 0.495429 | 3.1:-14378167 | None:intergenic |
| CTAATATTGTAGTGTTGTGA+TGG | 0.497399 | 3.1:+14385512 | MS.gene50869:intron |
| AGCTGGTGAAGTAGCTTGCT+TGG | 0.497637 | 3.1:-14378097 | None:intergenic |
| GTTAAAGGCAGAGTGGTTGT+TGG | 0.498615 | 3.1:+14391971 | MS.gene50869:CDS |
| ATCTGTGATGGATGGAGATA+AGG | 0.499761 | 3.1:+14383678 | MS.gene50869:CDS |
| CCTCAATATCTTCATGAAGC+TGG | 0.501396 | 3.1:+14384570 | MS.gene50869:CDS |
| TGGAAATGTTGGAGACCATA+TGG | 0.503026 | 3.1:+14386913 | MS.gene50869:CDS |
| AGAGTTCCTCGTAGATCGTC+CGG | 0.503037 | 3.1:+14378195 | MS.gene50869:CDS |
| TTAAAGCAAATAGAAGCTCC+AGG | 0.504557 | 3.1:-14386670 | None:intergenic |
| GGTAATTTCAAGGAAAGAAA+GGG | 0.504993 | 3.1:+14378675 | MS.gene50869:intron |
| AAGAGTTATAATCCAAAGAC+AGG | 0.505829 | 3.1:+14386386 | MS.gene50869:CDS |
| TGGCTTGCAGTTCCGTTGGT+AGG | 0.505914 | 3.1:-14386244 | None:intergenic |
| TCATCCCGATAAGTATAAAT+GGG | 0.509710 | 3.1:-14384266 | None:intergenic |
| CTCCAGGAGCTTGAGTAACA+TGG | 0.509837 | 3.1:-14386100 | None:intergenic |
| AGGATGATTTGCGTTCTTTG+AGG | 0.511072 | 3.1:+14379823 | MS.gene50869:CDS |
| AGAGTCCAACACAATTCCCT+TGG | 0.512155 | 3.1:+14392081 | MS.gene50869:CDS |
| AATAGAAAGCATAGCAGCAA+TGG | 0.513412 | 3.1:-14386819 | None:intergenic |
| ATTGAAAGATCAAAGAGAAA+GGG | 0.513749 | 3.1:+14379130 | MS.gene50869:CDS |
| TAAACCAAATCAGGAATCCA+AGG | 0.516041 | 3.1:-14392098 | None:intergenic |
| TAGTGTTGTGATGGTGGATG+AGG | 0.516430 | 3.1:+14385521 | MS.gene50869:intron |
| AATTTCTTCCGCAAACGCAC+GGG | 0.517433 | 3.1:-14378166 | None:intergenic |
| TTAGGTAAGGAGCATGAAAC+GGG | 0.524249 | 3.1:+14387951 | MS.gene50869:intron |
| TTTAGGTAAGGAGCATGAAA+CGG | 0.525535 | 3.1:+14387950 | MS.gene50869:intron |
| GCAAGAATACTTGAAGAAAA+GGG | 0.528454 | 3.1:+14380468 | MS.gene50869:CDS |
| TACCTGTCTCATATACTCCT+TGG | 0.528493 | 3.1:-14391854 | None:intergenic |
| AACTCCTGAAGGGGCACGAA+AGG | 0.530127 | 3.1:+14386280 | MS.gene50869:CDS |
| AATAAGGCTTCCGCAGGTGG+AGG | 0.530756 | 3.1:-14386641 | None:intergenic |
| ATTTGCTGAGCAAGAGGCAT+GGG | 0.531740 | 3.1:+14383239 | MS.gene50869:CDS |
| AGAGAGAGAAGCTGCAATGT+TGG | 0.534326 | 3.1:+14378361 | MS.gene50869:CDS |
| GCCTCAGCTATGCAACGAGC+TGG | 0.536697 | 3.1:+14386443 | MS.gene50869:CDS |
| ACCTGTGCCAGCCCTGAACT+AGG | 0.537626 | 3.1:-14388240 | None:intergenic |
| CCAGCTTCATGAAGATATTG+AGG | 0.537895 | 3.1:-14384570 | None:intergenic |
| TTCACATACATCCTAGTTCA+GGG | 0.538952 | 3.1:+14388229 | MS.gene50869:CDS |
| AGCTTTCCCACTAAATCAGC+TGG | 0.539528 | 3.1:-14378114 | None:intergenic |
| TGTACTGTACAACTGTGCGC+TGG | 0.541459 | 3.1:-14377948 | None:intergenic |
| ATATTTGAACCAACTCCTGA+AGG | 0.541823 | 3.1:+14386269 | MS.gene50869:CDS |
| CGTATCGGACACTTAAACAT+GGG | 0.545979 | 3.1:+14388199 | MS.gene50869:CDS |
| TCAACTGGATACCTTCTCCC+TGG | 0.547027 | 3.1:-14386011 | None:intergenic |
| AGACCATATGGCGTTGCTCA+AGG | 0.547040 | 3.1:+14386925 | MS.gene50869:CDS |
| TCCTAGTTCAGGGCTGGCAC+AGG | 0.548652 | 3.1:+14388239 | MS.gene50869:CDS |
| GGAATCCAAGGGAATTGTGT+TGG | 0.549405 | 3.1:-14392086 | None:intergenic |
| ATCAAGGCATCTGTGATGGA+TGG | 0.549949 | 3.1:+14383670 | MS.gene50869:CDS |
| ATCAAAACTCACATTTAAGC+CGG | 0.550081 | 3.1:-14378214 | None:intergenic |
| CCAAGCTGTTCATGACCACC+AGG | 0.553234 | 3.1:+14384295 | MS.gene50869:CDS |
| AGCATCGAACTAGAGGCTTA+GGG | 0.553519 | 3.1:+14386180 | MS.gene50869:CDS |
| GAATCCATTTGCTGAGCAAG+AGG | 0.554144 | 3.1:+14383233 | MS.gene50869:CDS |
| TAAGCTTGGTGAGTTAACTA+AGG | 0.554788 | 3.1:+14386703 | MS.gene50869:CDS |
| CCTTGAGCTGGTAATAGTGA+GGG | 0.555219 | 3.1:-14392001 | None:intergenic |
| ACAGTTGTACAGTACATGAT+TGG | 0.556166 | 3.1:+14377955 | MS.gene50869:CDS |
| GCTTTCAATAAGGCTTCCGC+AGG | 0.556973 | 3.1:-14386647 | None:intergenic |
| ATTCTGAAATATATGACAGA+TGG | 0.557301 | 3.1:+14385372 | MS.gene50869:CDS |
| TATTTGAACCAACTCCTGAA+GGG | 0.558480 | 3.1:+14386270 | MS.gene50869:CDS |
| TATTCAAAATTCCAGGGAGA+AGG | 0.560778 | 3.1:+14386000 | MS.gene50869:CDS |
| AATATTCCTTACTGGTCAAG+AGG | 0.562988 | 3.1:+14386130 | MS.gene50869:CDS |
| TGCTGAGCAAGAGGCATGGG+AGG | 0.565244 | 3.1:+14383242 | MS.gene50869:CDS |
| ATATTGTAGTGTTGTGATGG+TGG | 0.565373 | 3.1:+14385515 | MS.gene50869:intron |
| GAGAAGCTGCAATGTTGGCA+AGG | 0.566064 | 3.1:+14378366 | MS.gene50869:CDS |
| GGAAGCCTTATTGAAAGCCC+TGG | 0.567355 | 3.1:+14386652 | MS.gene50869:CDS |
| CACGAATTAGATGTTAAACT+AGG | 0.568521 | 3.1:+14385025 | MS.gene50869:CDS |
| TGTCTTCAACATCCTTGAGC+TGG | 0.569542 | 3.1:-14392013 | None:intergenic |
| TGGTCAAGAGGAAATTGAAA+CGG | 0.570549 | 3.1:+14386142 | MS.gene50869:CDS |
| AACCAAGGAGTATATGAGAC+AGG | 0.572507 | 3.1:+14391852 | MS.gene50869:CDS |
| TAAGGAGCATGAAACGGGCG+AGG | 0.573243 | 3.1:+14387956 | MS.gene50869:CDS |
| AAGTACATGCAGACAATGCA+AGG | 0.575270 | 3.1:+14386876 | MS.gene50869:CDS |
| GTACTTGTTTATCCTTTGGA+CGG | 0.576505 | 3.1:-14386859 | None:intergenic |
| GTACTGTACAACTGTGCGCT+GGG | 0.577885 | 3.1:-14377947 | None:intergenic |
| AACTTGCAGGTCTATTAGAG+AGG | 0.579079 | 3.1:+14387992 | MS.gene50869:CDS |
| CTCCAATATTCAAAATTCCA+GGG | 0.579455 | 3.1:+14385994 | MS.gene50869:CDS |
| CATTTGCTGAGCAAGAGGCA+TGG | 0.580231 | 3.1:+14383238 | MS.gene50869:CDS |
| AAAAGAAATTAGAAGAACTG+AGG | 0.584487 | 3.1:+14380494 | MS.gene50869:CDS |
| TGGCTACACAAAACATGGAA+TGG | 0.586250 | 3.1:+14384590 | MS.gene50869:CDS |
| ATCTTGAAGCATCGAACTAG+AGG | 0.588718 | 3.1:+14386173 | MS.gene50869:CDS |
| CTTGGTGAGTTAACTAAGGT+AGG | 0.589059 | 3.1:+14386707 | MS.gene50869:CDS |
| GGAGGCAGACAATGTGAATG+AGG | 0.590429 | 3.1:+14381979 | MS.gene50869:CDS |
| TTTGACAACATAGGATCAAG+TGG | 0.590587 | 3.1:-14386749 | None:intergenic |
| CATACATCCTAGTTCAGGGC+TGG | 0.591167 | 3.1:+14388233 | MS.gene50869:CDS |
| TGGTGTGAAGCTTTCAGAAG+TGG | 0.593619 | 3.1:+14380720 | MS.gene50869:CDS |
| TTATAATCCAAAGACAGGAA+TGG | 0.593927 | 3.1:+14386391 | MS.gene50869:CDS |
| CTGAACCACTCTCTTCATCA+GGG | 0.594743 | 3.1:-14378723 | None:intergenic |
| TTTCTGCGATATTGGTAGCA+AGG | 0.596637 | 3.1:-14386307 | None:intergenic |
| TCAAGATGATCAAGAAGATG+AGG | 0.598731 | 3.1:+14378538 | MS.gene50869:CDS |
| ATCGACGATGACCATACTGT+TGG | 0.599682 | 3.1:+14378428 | MS.gene50869:CDS |
| CCCTCACTATTACCAGCTCA+AGG | 0.601516 | 3.1:+14392001 | MS.gene50869:CDS |
| CTGATGTGCAATCCTCAAAA+CGG | 0.602256 | 3.1:-14385341 | None:intergenic |
| AAACCAAATCAGGAATCCAA+GGG | 0.603948 | 3.1:-14392097 | None:intergenic |
| GACGATGACCATACTGTTGG+TGG | 0.604482 | 3.1:+14378431 | MS.gene50869:CDS |
| TCCTTGAGCTGGTAATAGTG+AGG | 0.604594 | 3.1:-14392002 | None:intergenic |
| ACTTCACCAGCTGATTTAGT+GGG | 0.604883 | 3.1:+14378108 | MS.gene50869:CDS |
| GCGATGACAATCTAAAGACA+TGG | 0.605065 | 3.1:+14377890 | MS.gene50869:CDS |
| ACTTGCAGGTCTATTAGAGA+GGG | 0.605123 | 3.1:+14387993 | MS.gene50869:CDS |
| TGTGCAATCCTCAAAACGGA+TGG | 0.611786 | 3.1:-14385337 | None:intergenic |
| GCAGTTTGATAATGACGAGA+TGG | 0.612572 | 3.1:+14383771 | MS.gene50869:intron |
| GAAGCTGGCTACACAAAACA+TGG | 0.615560 | 3.1:+14384585 | MS.gene50869:CDS |
| ACCAGCTCGTTGCATAGCTG+AGG | 0.615647 | 3.1:-14386444 | None:intergenic |
| TCTTAGGGATACAAATGCTG+AGG | 0.615663 | 3.1:+14383203 | MS.gene50869:intron |
| AGATGCTGCAGCAACAAGGA+AGG | 0.616546 | 3.1:+14379181 | MS.gene50869:CDS |
| ATTTGAACCAACTCCTGAAG+GGG | 0.617393 | 3.1:+14386271 | MS.gene50869:CDS |
| TTGACAACATAGGATCAAGT+GGG | 0.619054 | 3.1:-14386748 | None:intergenic |
| AAGTCAAAACTACATTTGTG+AGG | 0.619827 | 3.1:-14386571 | None:intergenic |
| TGATGAAGAGAGTGGTTCAG+AGG | 0.620153 | 3.1:+14378726 | MS.gene50869:CDS |
| TCGTATCGGACACTTAAACA+TGG | 0.621174 | 3.1:+14388198 | MS.gene50869:CDS |
| GACAGATGGAATGTTACTGA+GGG | 0.621218 | 3.1:+14385386 | MS.gene50869:CDS |
| TGATTTAGTGGGAAAGCTAG+TGG | 0.623101 | 3.1:+14378119 | MS.gene50869:CDS |
| CCTGGTGGTCATGAACAGCT+TGG | 0.624706 | 3.1:-14384295 | None:intergenic |
| ATAGACCTGCAAGTTGATCA+CGG | 0.625195 | 3.1:-14387984 | None:intergenic |
| AACTTACTGGTAATCATCAG+AGG | 0.626341 | 3.1:-14383428 | None:intergenic |
| AGTTAACTAAGGTAGGTAGA+CGG | 0.635916 | 3.1:+14386714 | MS.gene50869:CDS |
| AAAGAGATGCTGCAGCAACA+AGG | 0.637412 | 3.1:+14379177 | MS.gene50869:CDS |
| GACGCTTATGATCAAGAAGG+TGG | 0.640182 | 3.1:+14382670 | MS.gene50869:CDS |
| AACTAAGGTAGGTAGACGGA+TGG | 0.640198 | 3.1:+14386718 | MS.gene50869:CDS |
| AAATTAACACGAAAGGAGGA+AGG | 0.647543 | 3.1:+14379661 | MS.gene50869:CDS |
| TAAAGCAAATAGAAGCTCCA+GGG | 0.647710 | 3.1:-14386669 | None:intergenic |
| CTTGAGCTGGTAATAGTGAG+GGG | 0.650389 | 3.1:-14392000 | None:intergenic |
| TCAGCAACTTAAGATCAGAT+CGG | 0.652700 | 3.1:-14385920 | None:intergenic |
| TCGTGTTGCTGCTATGAGTG+TGG | 0.654925 | 3.1:+14384988 | MS.gene50869:CDS |
| CGATGACAATCTAAAGACAT+GGG | 0.659243 | 3.1:+14377891 | MS.gene50869:CDS |
| AAGGAGCATGAAACGGGCGA+GGG | 0.659629 | 3.1:+14387957 | MS.gene50869:CDS |
| ATTTATGGATCCTCCACCTG+CGG | 0.661490 | 3.1:+14386631 | MS.gene50869:CDS |
| TGACAGATGGAATGTTACTG+AGG | 0.662638 | 3.1:+14385385 | MS.gene50869:CDS |
| TATATATGCCAACCTACCAA+CGG | 0.662787 | 3.1:+14386232 | MS.gene50869:CDS |
| ACTTCCCCTGATGAAGAGAG+TGG | 0.664057 | 3.1:+14378718 | MS.gene50869:CDS |
| CCAGACGCTTATGATCAAGA+AGG | 0.664185 | 3.1:+14382667 | MS.gene50869:CDS |
| AGACCAATTATTCAACACAA+TGG | 0.664249 | 3.1:+14387501 | MS.gene50869:CDS |
| CTCATAGCAGCAACACGACG+TGG | 0.664953 | 3.1:-14384983 | None:intergenic |
| AGAATACTTGAAGAAAAGGG+AGG | 0.669190 | 3.1:+14380471 | MS.gene50869:CDS |
| TGGTGGATGAGGCTCATGAA+AGG | 0.672702 | 3.1:+14385532 | MS.gene50869:CDS |
| TGAACCACTCTCTTCATCAG+GGG | 0.680445 | 3.1:-14378722 | None:intergenic |
| TGAACTAGTACTCACAACCA+AGG | 0.703390 | 3.1:+14391837 | MS.gene50869:CDS |
| ACACTGTACCCGAAATACAG+AGG | 0.712471 | 3.1:+14386543 | MS.gene50869:CDS |
| TTTAAGCCGGACGATCTACG+AGG | 0.723944 | 3.1:-14378201 | None:intergenic |
| TCACGGAGTTAAAGGCAGAG+TGG | 0.724523 | 3.1:+14391964 | MS.gene50869:CDS |
| AGATGTTAAACTAGGACACG+AGG | 0.724928 | 3.1:+14385033 | MS.gene50869:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 14377883 | 14392121 | 14377883 | ID=MS.gene50869 |
| chr3.1 | mRNA | 14377883 | 14392121 | 14377883 | ID=MS.gene50869.t1;Parent=MS.gene50869 |
| chr3.1 | exon | 14377883 | 14377982 | 14377883 | ID=MS.gene50869.t1.exon1;Parent=MS.gene50869.t1 |
| chr3.1 | CDS | 14377883 | 14377982 | 14377883 | ID=cds.MS.gene50869.t1;Parent=MS.gene50869.t1 |
| chr3.1 | exon | 14378097 | 14378224 | 14378097 | ID=MS.gene50869.t1.exon2;Parent=MS.gene50869.t1 |
| chr3.1 | CDS | 14378097 | 14378224 | 14378097 | ID=cds.MS.gene50869.t1;Parent=MS.gene50869.t1 |
| chr3.1 | exon | 14378347 | 14378559 | 14378347 | ID=MS.gene50869.t1.exon3;Parent=MS.gene50869.t1 |
| chr3.1 | CDS | 14378347 | 14378559 | 14378347 | ID=cds.MS.gene50869.t1;Parent=MS.gene50869.t1 |
| chr3.1 | exon | 14378676 | 14378747 | 14378676 | ID=MS.gene50869.t1.exon4;Parent=MS.gene50869.t1 |
| chr3.1 | CDS | 14378676 | 14378747 | 14378676 | ID=cds.MS.gene50869.t1;Parent=MS.gene50869.t1 |
| chr3.1 | exon | 14379116 | 14379202 | 14379116 | ID=MS.gene50869.t1.exon5;Parent=MS.gene50869.t1 |
| chr3.1 | CDS | 14379116 | 14379202 | 14379116 | ID=cds.MS.gene50869.t1;Parent=MS.gene50869.t1 |
| chr3.1 | exon | 14379649 | 14379682 | 14379649 | ID=MS.gene50869.t1.exon6;Parent=MS.gene50869.t1 |
| chr3.1 | CDS | 14379649 | 14379682 | 14379649 | ID=cds.MS.gene50869.t1;Parent=MS.gene50869.t1 |
| chr3.1 | exon | 14379790 | 14379844 | 14379790 | ID=MS.gene50869.t1.exon7;Parent=MS.gene50869.t1 |
| chr3.1 | CDS | 14379790 | 14379844 | 14379790 | ID=cds.MS.gene50869.t1;Parent=MS.gene50869.t1 |
| chr3.1 | exon | 14380456 | 14380515 | 14380456 | ID=MS.gene50869.t1.exon8;Parent=MS.gene50869.t1 |
| chr3.1 | CDS | 14380456 | 14380515 | 14380456 | ID=cds.MS.gene50869.t1;Parent=MS.gene50869.t1 |
| chr3.1 | exon | 14380687 | 14380758 | 14380687 | ID=MS.gene50869.t1.exon9;Parent=MS.gene50869.t1 |
| chr3.1 | CDS | 14380687 | 14380758 | 14380687 | ID=cds.MS.gene50869.t1;Parent=MS.gene50869.t1 |
| chr3.1 | exon | 14381937 | 14382000 | 14381937 | ID=MS.gene50869.t1.exon10;Parent=MS.gene50869.t1 |
| chr3.1 | CDS | 14381937 | 14382000 | 14381937 | ID=cds.MS.gene50869.t1;Parent=MS.gene50869.t1 |
| chr3.1 | exon | 14382658 | 14382737 | 14382658 | ID=MS.gene50869.t1.exon11;Parent=MS.gene50869.t1 |
| chr3.1 | CDS | 14382658 | 14382737 | 14382658 | ID=cds.MS.gene50869.t1;Parent=MS.gene50869.t1 |
| chr3.1 | exon | 14383209 | 14383276 | 14383209 | ID=MS.gene50869.t1.exon12;Parent=MS.gene50869.t1 |
| chr3.1 | CDS | 14383209 | 14383276 | 14383209 | ID=cds.MS.gene50869.t1;Parent=MS.gene50869.t1 |
| chr3.1 | exon | 14383386 | 14383443 | 14383386 | ID=MS.gene50869.t1.exon13;Parent=MS.gene50869.t1 |
| chr3.1 | CDS | 14383386 | 14383443 | 14383386 | ID=cds.MS.gene50869.t1;Parent=MS.gene50869.t1 |
| chr3.1 | exon | 14383642 | 14383699 | 14383642 | ID=MS.gene50869.t1.exon14;Parent=MS.gene50869.t1 |
| chr3.1 | CDS | 14383642 | 14383699 | 14383642 | ID=cds.MS.gene50869.t1;Parent=MS.gene50869.t1 |
| chr3.1 | exon | 14383775 | 14383843 | 14383775 | ID=MS.gene50869.t1.exon15;Parent=MS.gene50869.t1 |
| chr3.1 | CDS | 14383775 | 14383843 | 14383775 | ID=cds.MS.gene50869.t1;Parent=MS.gene50869.t1 |
| chr3.1 | exon | 14384248 | 14384316 | 14384248 | ID=MS.gene50869.t1.exon16;Parent=MS.gene50869.t1 |
| chr3.1 | CDS | 14384248 | 14384316 | 14384248 | ID=cds.MS.gene50869.t1;Parent=MS.gene50869.t1 |
| chr3.1 | exon | 14384522 | 14384611 | 14384522 | ID=MS.gene50869.t1.exon17;Parent=MS.gene50869.t1 |
| chr3.1 | CDS | 14384522 | 14384611 | 14384522 | ID=cds.MS.gene50869.t1;Parent=MS.gene50869.t1 |
| chr3.1 | exon | 14384968 | 14385054 | 14384968 | ID=MS.gene50869.t1.exon18;Parent=MS.gene50869.t1 |
| chr3.1 | CDS | 14384968 | 14385054 | 14384968 | ID=cds.MS.gene50869.t1;Parent=MS.gene50869.t1 |
| chr3.1 | exon | 14385327 | 14385442 | 14385327 | ID=MS.gene50869.t1.exon19;Parent=MS.gene50869.t1 |
| chr3.1 | CDS | 14385327 | 14385442 | 14385327 | ID=cds.MS.gene50869.t1;Parent=MS.gene50869.t1 |
| chr3.1 | exon | 14385524 | 14385590 | 14385524 | ID=MS.gene50869.t1.exon20;Parent=MS.gene50869.t1 |
| chr3.1 | CDS | 14385524 | 14385590 | 14385524 | ID=cds.MS.gene50869.t1;Parent=MS.gene50869.t1 |
| chr3.1 | exon | 14385906 | 14386946 | 14385906 | ID=MS.gene50869.t1.exon21;Parent=MS.gene50869.t1 |
| chr3.1 | CDS | 14385906 | 14386946 | 14385906 | ID=cds.MS.gene50869.t1;Parent=MS.gene50869.t1 |
| chr3.1 | exon | 14387482 | 14387544 | 14387482 | ID=MS.gene50869.t1.exon22;Parent=MS.gene50869.t1 |
| chr3.1 | CDS | 14387482 | 14387544 | 14387482 | ID=cds.MS.gene50869.t1;Parent=MS.gene50869.t1 |
| chr3.1 | exon | 14387955 | 14388078 | 14387955 | ID=MS.gene50869.t1.exon23;Parent=MS.gene50869.t1 |
| chr3.1 | CDS | 14387955 | 14388078 | 14387955 | ID=cds.MS.gene50869.t1;Parent=MS.gene50869.t1 |
| chr3.1 | exon | 14388160 | 14388260 | 14388160 | ID=MS.gene50869.t1.exon24;Parent=MS.gene50869.t1 |
| chr3.1 | CDS | 14388160 | 14388260 | 14388160 | ID=cds.MS.gene50869.t1;Parent=MS.gene50869.t1 |
| chr3.1 | exon | 14391811 | 14391873 | 14391811 | ID=MS.gene50869.t1.exon25;Parent=MS.gene50869.t1 |
| chr3.1 | CDS | 14391811 | 14391873 | 14391811 | ID=cds.MS.gene50869.t1;Parent=MS.gene50869.t1 |
| chr3.1 | exon | 14391963 | 14392121 | 14391963 | ID=MS.gene50869.t1.exon26;Parent=MS.gene50869.t1 |
| chr3.1 | CDS | 14391963 | 14392121 | 14391963 | ID=cds.MS.gene50869.t1;Parent=MS.gene50869.t1 |
| Gene Sequence |
| Protein sequence |
