Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55406.t1 | GAU36126.1 | 65 | 968 | 150 | 6 | 1 | 786 | 92 | 1052 | 0.00E+00 | 1124.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55406.t1 | A0A2Z6MW28 | 65.0 | 968 | 150 | 6 | 1 | 786 | 92 | 1052 | 0.0e+00 | 1124.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene55406 | 0.839379 | 1.64E-57 | -1.69E-46 |
| MS.gene049159 | MS.gene55406 | 0.81664 | 4.98E-52 | -1.69E-46 |
| MS.gene049254 | MS.gene55406 | 0.836261 | 1.04E-56 | -1.69E-46 |
| MS.gene049272 | MS.gene55406 | 0.810061 | 1.39E-50 | -1.69E-46 |
| MS.gene049343 | MS.gene55406 | 0.806551 | 7.79E-50 | -1.69E-46 |
| MS.gene049404 | MS.gene55406 | 0.823864 | 1.10E-53 | -1.69E-46 |
| MS.gene049435 | MS.gene55406 | 0.850129 | 2.07E-60 | -1.69E-46 |
| MS.gene049501 | MS.gene55406 | 0.819349 | 1.22E-52 | -1.69E-46 |
| MS.gene049711 | MS.gene55406 | 0.858301 | 9.05E-63 | -1.69E-46 |
| MS.gene049850 | MS.gene55406 | 0.846556 | 2.02E-59 | -1.69E-46 |
| MS.gene050026 | MS.gene55406 | 0.80599 | 1.02E-49 | -1.69E-46 |
| MS.gene050137 | MS.gene55406 | 0.802917 | 4.47E-49 | -1.69E-46 |
| MS.gene050156 | MS.gene55406 | 0.825146 | 5.50E-54 | -1.69E-46 |
| MS.gene050251 | MS.gene55406 | 0.825484 | 4.57E-54 | -1.69E-46 |
| MS.gene050442 | MS.gene55406 | 0.819453 | 1.15E-52 | -1.69E-46 |
| MS.gene05045 | MS.gene55406 | 0.81158 | 6.52E-51 | -1.69E-46 |
| MS.gene050559 | MS.gene55406 | 0.814371 | 1.59E-51 | -1.69E-46 |
| MS.gene050561 | MS.gene55406 | 0.821255 | 4.45E-53 | -1.69E-46 |
| MS.gene050562 | MS.gene55406 | 0.809749 | 1.62E-50 | -1.69E-46 |
| MS.gene050719 | MS.gene55406 | 0.800115 | 1.68E-48 | -1.69E-46 |
| MS.gene050759 | MS.gene55406 | 0.81205 | 5.15E-51 | -1.69E-46 |
| MS.gene050780 | MS.gene55406 | 0.809136 | 2.20E-50 | -1.69E-46 |
| MS.gene050844 | MS.gene55406 | 0.82608 | 3.30E-54 | -1.69E-46 |
| MS.gene050962 | MS.gene55406 | 0.803104 | 4.09E-49 | -1.69E-46 |
| MS.gene051198 | MS.gene55406 | 0.826296 | 2.93E-54 | -1.69E-46 |
| MS.gene051247 | MS.gene55406 | 0.842187 | 3.01E-58 | -1.69E-46 |
| MS.gene051279 | MS.gene55406 | 0.851897 | 6.58E-61 | -1.69E-46 |
| MS.gene051388 | MS.gene55406 | 0.831121 | 2.00E-55 | -1.69E-46 |
| MS.gene05157 | MS.gene55406 | 0.818305 | 2.10E-52 | -1.69E-46 |
| MS.gene051594 | MS.gene55406 | 0.809864 | 1.53E-50 | -1.69E-46 |
| MS.gene051719 | MS.gene55406 | 0.841041 | 6.04E-58 | -1.69E-46 |
| MS.gene051720 | MS.gene55406 | 0.839619 | 1.42E-57 | -1.69E-46 |
| MS.gene051744 | MS.gene55406 | 0.88503 | 1.15E-71 | -1.69E-46 |
| MS.gene051800 | MS.gene55406 | 0.826836 | 2.18E-54 | -1.69E-46 |
| MS.gene051957 | MS.gene55406 | 0.818134 | 2.30E-52 | -1.69E-46 |
| MS.gene052012 | MS.gene55406 | 0.803262 | 3.79E-49 | -1.69E-46 |
| MS.gene052020 | MS.gene55406 | 0.836909 | 7.10E-57 | -1.69E-46 |
| MS.gene052323 | MS.gene55406 | 0.820685 | 6.02E-53 | -1.69E-46 |
| MS.gene052384 | MS.gene55406 | 0.810602 | 1.06E-50 | -1.69E-46 |
| MS.gene052516 | MS.gene55406 | 0.832489 | 9.18E-56 | -1.69E-46 |
| MS.gene052519 | MS.gene55406 | 0.826027 | 3.40E-54 | -1.69E-46 |
| MS.gene052582 | MS.gene55406 | 0.861508 | 9.77E-64 | -1.69E-46 |
| MS.gene052584 | MS.gene55406 | 0.859415 | 4.20E-63 | -1.69E-46 |
| MS.gene052611 | MS.gene55406 | 0.841616 | 4.27E-58 | -1.69E-46 |
| MS.gene052665 | MS.gene55406 | 0.81216 | 4.87E-51 | -1.69E-46 |
| MS.gene052773 | MS.gene55406 | 0.853216 | 2.77E-61 | -1.69E-46 |
| MS.gene052863 | MS.gene55406 | 0.813641 | 2.31E-51 | -1.69E-46 |
| MS.gene052896 | MS.gene55406 | 0.82773 | 1.33E-54 | -1.69E-46 |
| MS.gene053008 | MS.gene55406 | 0.810399 | 1.18E-50 | -1.69E-46 |
| MS.gene053079 | MS.gene55406 | 0.809656 | 1.70E-50 | -1.69E-46 |
| MS.gene053144 | MS.gene55406 | 0.820026 | 8.52E-53 | -1.69E-46 |
| MS.gene053147 | MS.gene55406 | 0.804231 | 2.39E-49 | -1.69E-46 |
| MS.gene053164 | MS.gene55406 | 0.808709 | 2.71E-50 | -1.69E-46 |
| MS.gene053221 | MS.gene55406 | 0.826535 | 2.57E-54 | -1.69E-46 |
| MS.gene053226 | MS.gene55406 | 0.87958 | 1.11E-69 | -1.69E-46 |
| MS.gene053621 | MS.gene55406 | 0.810696 | 1.01E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene55406 | 0.807655 | 4.55E-50 | -1.69E-46 |
| MS.gene053998 | MS.gene55406 | 0.814143 | 1.79E-51 | -1.69E-46 |
| MS.gene05423 | MS.gene55406 | 0.808465 | 3.06E-50 | -1.69E-46 |
| MS.gene054291 | MS.gene55406 | -0.818655 | 1.75E-52 | -1.69E-46 |
| MS.gene054467 | MS.gene55406 | 0.835834 | 1.33E-56 | -1.69E-46 |
| MS.gene054468 | MS.gene55406 | 0.831393 | 1.71E-55 | -1.69E-46 |
| MS.gene054576 | MS.gene55406 | 0.82748 | 1.53E-54 | -1.69E-46 |
| MS.gene054584 | MS.gene55406 | 0.836432 | 9.39E-57 | -1.69E-46 |
| MS.gene05458 | MS.gene55406 | 0.81379 | 2.14E-51 | -1.69E-46 |
| MS.gene054651 | MS.gene55406 | 0.834543 | 2.82E-56 | -1.69E-46 |
| MS.gene05468 | MS.gene55406 | 0.80724 | 5.57E-50 | -1.69E-46 |
| MS.gene054775 | MS.gene55406 | 0.85157 | 8.14E-61 | -1.69E-46 |
| MS.gene054801 | MS.gene55406 | 0.818288 | 2.12E-52 | -1.69E-46 |
| MS.gene054991 | MS.gene55406 | 0.809099 | 2.24E-50 | -1.69E-46 |
| MS.gene055227 | MS.gene55406 | 0.812922 | 3.32E-51 | -1.69E-46 |
| MS.gene055357 | MS.gene55406 | 0.811746 | 6.00E-51 | -1.69E-46 |
| MS.gene055465 | MS.gene55406 | 0.829932 | 3.90E-55 | -1.69E-46 |
| MS.gene055466 | MS.gene55406 | 0.837458 | 5.14E-57 | -1.69E-46 |
| MS.gene055468 | MS.gene55406 | 0.817172 | 3.78E-52 | -1.69E-46 |
| MS.gene055469 | MS.gene55406 | 0.804831 | 1.79E-49 | -1.69E-46 |
| MS.gene055512 | MS.gene55406 | 0.814726 | 1.33E-51 | -1.69E-46 |
| MS.gene055513 | MS.gene55406 | 0.801387 | 9.22E-49 | -1.69E-46 |
| MS.gene055586 | MS.gene55406 | 0.824534 | 7.66E-54 | -1.69E-46 |
| MS.gene055778 | MS.gene55406 | 0.812692 | 3.73E-51 | -1.69E-46 |
| MS.gene055818 | MS.gene55406 | 0.834905 | 2.29E-56 | -1.69E-46 |
| MS.gene055926 | MS.gene55406 | 0.839656 | 1.39E-57 | -1.69E-46 |
| MS.gene05604 | MS.gene55406 | 0.820684 | 6.02E-53 | -1.69E-46 |
| MS.gene056050 | MS.gene55406 | 0.846856 | 1.67E-59 | -1.69E-46 |
| MS.gene056162 | MS.gene55406 | 0.828396 | 9.20E-55 | -1.69E-46 |
| MS.gene056174 | MS.gene55406 | 0.852599 | 4.15E-61 | -1.69E-46 |
| MS.gene056308 | MS.gene55406 | 0.841757 | 3.92E-58 | -1.69E-46 |
| MS.gene056366 | MS.gene55406 | 0.819371 | 1.20E-52 | -1.69E-46 |
| MS.gene056424 | MS.gene55406 | 0.810404 | 1.17E-50 | -1.69E-46 |
| MS.gene056506 | MS.gene55406 | 0.807047 | 6.12E-50 | -1.69E-46 |
| MS.gene056507 | MS.gene55406 | 0.819551 | 1.09E-52 | -1.69E-46 |
| MS.gene056542 | MS.gene55406 | 0.8003 | 1.54E-48 | -1.69E-46 |
| MS.gene056553 | MS.gene55406 | 0.831319 | 1.79E-55 | -1.69E-46 |
| MS.gene056595 | MS.gene55406 | 0.801271 | 9.74E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene55406 | 0.840481 | 8.47E-58 | -1.69E-46 |
| MS.gene057026 | MS.gene55406 | 0.811825 | 5.77E-51 | -1.69E-46 |
| MS.gene057314 | MS.gene55406 | 0.839767 | 1.30E-57 | -1.69E-46 |
| MS.gene057360 | MS.gene55406 | 0.804754 | 1.86E-49 | -1.69E-46 |
| MS.gene057444 | MS.gene55406 | 0.835946 | 1.25E-56 | -1.69E-46 |
| MS.gene057598 | MS.gene55406 | 0.812056 | 5.14E-51 | -1.69E-46 |
| MS.gene057693 | MS.gene55406 | 0.822481 | 2.31E-53 | -1.69E-46 |
| MS.gene057915 | MS.gene55406 | 0.875034 | 4.23E-68 | -1.69E-46 |
| MS.gene058010 | MS.gene55406 | 0.822332 | 2.51E-53 | -1.69E-46 |
| MS.gene05847 | MS.gene55406 | 0.81478 | 1.29E-51 | -1.69E-46 |
| MS.gene058625 | MS.gene55406 | 0.85224 | 5.26E-61 | -1.69E-46 |
| MS.gene058636 | MS.gene55406 | 0.816729 | 4.76E-52 | -1.69E-46 |
| MS.gene058829 | MS.gene55406 | 0.837487 | 5.05E-57 | -1.69E-46 |
| MS.gene058979 | MS.gene55406 | 0.838528 | 2.73E-57 | -1.69E-46 |
| MS.gene05897 | MS.gene55406 | 0.824354 | 8.45E-54 | -1.69E-46 |
| MS.gene059015 | MS.gene55406 | 0.811117 | 8.22E-51 | -1.69E-46 |
| MS.gene059272 | MS.gene55406 | 0.819591 | 1.07E-52 | -1.69E-46 |
| MS.gene059439 | MS.gene55406 | 0.807249 | 5.54E-50 | -1.69E-46 |
| MS.gene059570 | MS.gene55406 | 0.857437 | 1.63E-62 | -1.69E-46 |
| MS.gene059601 | MS.gene55406 | 0.820206 | 7.75E-53 | -1.69E-46 |
| MS.gene059602 | MS.gene55406 | 0.807013 | 6.22E-50 | -1.69E-46 |
| MS.gene059625 | MS.gene55406 | 0.848708 | 5.16E-60 | -1.69E-46 |
| MS.gene059725 | MS.gene55406 | 0.848102 | 7.59E-60 | -1.69E-46 |
| MS.gene059842 | MS.gene55406 | 0.826023 | 3.41E-54 | -1.69E-46 |
| MS.gene059937 | MS.gene55406 | 0.802386 | 5.75E-49 | -1.69E-46 |
| MS.gene060312 | MS.gene55406 | 0.812642 | 3.83E-51 | -1.69E-46 |
| MS.gene060322 | MS.gene55406 | 0.828924 | 6.86E-55 | -1.69E-46 |
| MS.gene060373 | MS.gene55406 | 0.804469 | 2.13E-49 | -1.69E-46 |
| MS.gene060519 | MS.gene55406 | 0.802865 | 4.58E-49 | -1.69E-46 |
| MS.gene060521 | MS.gene55406 | 0.806938 | 6.45E-50 | -1.69E-46 |
| MS.gene06052 | MS.gene55406 | 0.814876 | 1.23E-51 | -1.69E-46 |
| MS.gene060587 | MS.gene55406 | 0.812667 | 3.78E-51 | -1.69E-46 |
| MS.gene060803 | MS.gene55406 | 0.803185 | 3.93E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55406.t1 | MTR_6g007640 | 57.143 | 77 | 31 | 1 | 706 | 780 | 22 | 98 | 3.59e-20 | 86.7 |
| MS.gene55406.t1 | MTR_7g071010 | 47.222 | 72 | 31 | 2 | 590 | 654 | 3 | 74 | 5.47e-12 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55406.t1 | AT1G40087 | 28.660 | 321 | 188 | 10 | 458 | 764 | 56 | 349 | 7.05e-20 | 93.2 |
| MS.gene55406.t1 | AT3G30200 | 27.010 | 311 | 186 | 9 | 470 | 764 | 184 | 469 | 3.84e-16 | 82.8 |
Find 161 sgRNAs with CRISPR-Local
Find 324 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTTATATTGTAGTTATTT+TGG | 0.133678 | 5.2:+34542134 | None:intergenic |
| CGTACAGATCCTTTCCTTTC+AGG | 0.145611 | 5.2:+34538686 | None:intergenic |
| CTGATTGTGATTGGCCATTT+TGG | 0.150250 | 5.2:+34541972 | None:intergenic |
| CTGATTGTGATTCATGATTT+TGG | 0.191362 | 5.2:+34542487 | None:intergenic |
| CTGATTGGGATTCATGATTT+TGG | 0.192482 | 5.2:+34543166 | None:intergenic |
| GAAGATCTAATGTTGAAAAT+AGG | 0.200930 | 5.2:-34538622 | MS.gene55406:CDS |
| CTCATTCTACTAACAGAATT+AGG | 0.227549 | 5.2:+34540248 | None:intergenic |
| AGACTCAAGATTCTACAAAT+TGG | 0.229852 | 5.2:-34538739 | MS.gene55406:CDS |
| CATTTATACGGTGGCTGTTT+TGG | 0.262455 | 5.2:+34543336 | None:intergenic |
| CTGATTGTGGTACATCATTT+TGG | 0.272342 | 5.2:+34543780 | None:intergenic |
| GTTGAATATCCTATTTCTTA+TGG | 0.272950 | 5.2:-34543731 | MS.gene55406:CDS |
| CATTTATATTGTGGTTGTTT+TGG | 0.273564 | 5.2:+34541301 | None:intergenic |
| GCTGAATATCCTATTTCTTT+TGG | 0.275592 | 5.2:-34542438 | MS.gene55406:CDS |
| GAAGGATCAACTCTTCTATC+AGG | 0.283230 | 5.2:+34539631 | None:intergenic |
| CTTGTATTTGCTGTTCTGAT+TGG | 0.285073 | 5.2:+34543151 | None:intergenic |
| ATGAGTAAAAGATTACTTAA+AGG | 0.290210 | 5.2:-34541899 | MS.gene55406:intron |
| CCTTAGAGCTATCAATTAAT+TGG | 0.301412 | 5.2:+34542164 | None:intergenic |
| TTTGTTTGCTCGGTCAATTC+AGG | 0.306771 | 5.2:+34539763 | None:intergenic |
| CCCATTCTACCATAAGAAAT+AGG | 0.310503 | 5.2:+34543722 | None:intergenic |
| CCTATTCTACCAAAAGAAAT+AGG | 0.316688 | 5.2:+34542429 | None:intergenic |
| AGATACAAGAGAGAATTTAA+TGG | 0.329508 | 5.2:-34542526 | MS.gene55406:CDS |
| CGCATAAAGTTTAAAGCTGT+TGG | 0.334017 | 5.2:-34542728 | MS.gene55406:CDS |
| ATTTCATACCTCCAACAAAT+TGG | 0.337165 | 5.2:+34541268 | None:intergenic |
| TGTTTATACGATGGTCGTTT+TGG | 0.343578 | 5.2:+34542648 | None:intergenic |
| GATACTTTAGGTAATCCTAT+AGG | 0.357677 | 5.2:-34540038 | MS.gene55406:CDS |
| AAGATCTAATGTTGAAAATA+GGG | 0.362744 | 5.2:-34538621 | MS.gene55406:CDS |
| TCCTATTTCTTATGGTAGAA+TGG | 0.363183 | 5.2:-34543723 | MS.gene55406:CDS |
| TTAGGAGTACTTGGAGCATT+AGG | 0.369290 | 5.2:+34538413 | None:intergenic |
| TAGTATTTGCTTTGTTTGCT+CGG | 0.376113 | 5.2:+34539753 | None:intergenic |
| GTGCACACTCTACATTTATA+CGG | 0.381096 | 5.2:+34543324 | None:intergenic |
| GCAAGTCTTAACCACCAAAA+TGG | 0.381151 | 5.2:-34541986 | MS.gene55406:CDS |
| CACAAATTAGAAAATTTGCT+TGG | 0.382028 | 5.2:-34538596 | MS.gene55406:CDS |
| TTTGTTGCTCTGATTGTGAT+TGG | 0.384046 | 5.2:+34540297 | None:intergenic |
| CAACTACAAGTGACAGTGAT+TGG | 0.384275 | 5.2:-34538367 | MS.gene55406:CDS |
| TTTCCAGCTTAGAATATTGA+TGG | 0.384605 | 5.2:+34539953 | None:intergenic |
| GAGATGTACCTTTCCCTCCT+TGG | 0.385864 | 5.2:+34539576 | None:intergenic |
| GATTGGTCACTTTGGAGATT+AGG | 0.387777 | 5.2:+34540314 | None:intergenic |
| CCAATTAATTGATAGCTCTA+AGG | 0.389326 | 5.2:-34542164 | MS.gene55406:CDS |
| GTGGAATCTCCTACTTCATT+TGG | 0.390695 | 5.2:-34541926 | MS.gene55406:CDS |
| TTGTATTTGCTGTTCTGATT+GGG | 0.391402 | 5.2:+34543152 | None:intergenic |
| TTAGGTCAGAAGAGGGTAAG+AGG | 0.399034 | 5.2:-34540122 | MS.gene55406:intron |
| AGGCACGAGAGAGAATTTAA+TGG | 0.403747 | 5.2:-34543205 | MS.gene55406:CDS |
| GACTCAAGATTCTACAAATT+GGG | 0.408913 | 5.2:-34538738 | MS.gene55406:CDS |
| CTGATTGTGATTGGTCACTT+TGG | 0.411868 | 5.2:+34540306 | None:intergenic |
| CACACTCTTCATTTATATTG+TGG | 0.411989 | 5.2:+34541292 | None:intergenic |
| GTACTTGTTCTGATTGTGAT+TGG | 0.412588 | 5.2:+34541963 | None:intergenic |
| AGTGAAAAGTGTGCACAATC+TGG | 0.412679 | 5.2:-34542115 | MS.gene55406:CDS |
| GTACAGATCCTTTCCTTTCA+GGG | 0.412708 | 5.2:+34538687 | None:intergenic |
| CCTATTTCTTATGGTAGAAT+GGG | 0.418294 | 5.2:-34543722 | MS.gene55406:CDS |
| TGTGTTGAAGTGGATACTTT+AGG | 0.418571 | 5.2:-34540050 | MS.gene55406:CDS |
| GAAGAGTTTGCACAATTTGA+AGG | 0.421083 | 5.2:-34543926 | MS.gene55406:CDS |
| GATTCCACACATCCGACATT+CGG | 0.422314 | 5.2:+34540093 | None:intergenic |
| ACAAATTAGAAAATTTGCTT+GGG | 0.426732 | 5.2:-34538595 | MS.gene55406:CDS |
| ATTCCACACATCCGACATTC+GGG | 0.431245 | 5.2:+34540094 | None:intergenic |
| TCCTAATGATTTCTCTAGTA+AGG | 0.438496 | 5.2:-34538396 | MS.gene55406:CDS |
| ATCGTGCTTTAGTACATCAT+TGG | 0.444149 | 5.2:-34539603 | MS.gene55406:CDS |
| GAAGAGTGTGACCAATTTGT+TGG | 0.461216 | 5.2:-34541279 | MS.gene55406:CDS |
| TGTTAGACAACTGAGGCTAA+TGG | 0.463813 | 5.2:-34539014 | MS.gene55406:intron |
| ATACTTTAGGTAATCCTATA+GGG | 0.464522 | 5.2:-34540037 | MS.gene55406:CDS |
| CAATCACTGTCACTTGTAGT+TGG | 0.466481 | 5.2:+34538368 | None:intergenic |
| AAACAAGACCGAGGAAGAAA+TGG | 0.468253 | 5.2:-34539665 | MS.gene55406:CDS |
| GGTTAAGACTTGCTACCATT+AGG | 0.476060 | 5.2:+34541996 | None:intergenic |
| AGATTAGGACTTGCTACCAC+TGG | 0.479706 | 5.2:+34540329 | None:intergenic |
| TAATATGTTTGAGTGGATAC+AGG | 0.480571 | 5.2:-34539907 | MS.gene55406:intron |
| TTTAAATGCACTGGGCTGCT+TGG | 0.481978 | 5.2:-34539997 | MS.gene55406:CDS |
| AATGAACCTTGGAAGACTCT+TGG | 0.485945 | 5.2:+34539423 | None:intergenic |
| ATGCACTGGGCTGCTTGGTA+AGG | 0.487077 | 5.2:-34539992 | MS.gene55406:CDS |
| CTCCCATCAATATTCTAAGC+TGG | 0.489833 | 5.2:-34539956 | MS.gene55406:CDS |
| GCATAAAGTTTAAAGCTGTT+GGG | 0.491168 | 5.2:-34542727 | MS.gene55406:CDS |
| GTAGGCAGCCATTTCTTCCT+CGG | 0.492642 | 5.2:+34539657 | None:intergenic |
| GAGAAATCATTAGGAGTACT+TGG | 0.493266 | 5.2:+34538404 | None:intergenic |
| TCCTTACTAGAGAAATCATT+AGG | 0.497003 | 5.2:+34538395 | None:intergenic |
| TTTAAAGCTGTTGGGAAAGG+TGG | 0.498924 | 5.2:-34542719 | MS.gene55406:CDS |
| AAAGGATCTGTACGTTGTCT+TGG | 0.502221 | 5.2:-34538677 | MS.gene55406:CDS |
| AAACATGACTTGAAAGCAAA+GGG | 0.504754 | 5.2:-34539697 | MS.gene55406:CDS |
| ATGAGTAAAAGTTTAACTAA+AGG | 0.511496 | 5.2:-34540230 | MS.gene55406:intron |
| AACTACAAGTGACAGTGATT+GGG | 0.519314 | 5.2:-34538366 | MS.gene55406:CDS |
| AACTCTTCTATCAGGGATGT+AGG | 0.523874 | 5.2:+34539639 | None:intergenic |
| AGTACATCATTGGTGTTCCA+AGG | 0.525050 | 5.2:-34539593 | MS.gene55406:CDS |
| ACACATATGAATTCTCCATC+TGG | 0.526107 | 5.2:+34540068 | None:intergenic |
| ATATTAGTTATGTTCAACTC+TGG | 0.530902 | 5.2:+34539924 | None:intergenic |
| GACGTATACTCAAGAGTAAG+AGG | 0.531396 | 5.2:-34538710 | MS.gene55406:CDS |
| ATGGGTAAAAGTTTACCTAA+AGG | 0.532217 | 5.2:-34543704 | MS.gene55406:intron |
| TGTATTTGCTGTTCTGATTG+TGG | 0.532371 | 5.2:+34543767 | None:intergenic |
| TCTTTATAGTATCTACAAGA+AGG | 0.533092 | 5.2:-34542021 | MS.gene55406:intron |
| ATCTGTACGTTGTCTTGGCA+AGG | 0.533551 | 5.2:-34538672 | MS.gene55406:CDS |
| CTCATTCTACCAAATGAAGT+AGG | 0.533963 | 5.2:+34541917 | None:intergenic |
| ATCTACAAGAAGGAGCCTAA+TGG | 0.534443 | 5.2:-34542011 | MS.gene55406:CDS |
| AAACTTTATGCGCCTCCCTA+CGG | 0.538836 | 5.2:+34542739 | None:intergenic |
| AAATAAGTAACATCAACAAA+AGG | 0.542008 | 5.2:-34539483 | MS.gene55406:CDS |
| AAGTTTAAAGCTGTTGGGAA+AGG | 0.542861 | 5.2:-34542722 | MS.gene55406:CDS |
| ATACCAATGAGAGGAACAAA+AGG | 0.544428 | 5.2:-34541395 | MS.gene55406:CDS |
| GAGACTCGTACTCGTAAAGA+TGG | 0.546024 | 5.2:-34538960 | MS.gene55406:CDS |
| TTTGCAAGCTATAGCTCAAG+AGG | 0.547144 | 5.2:-34538516 | MS.gene55406:intron |
| ATTATCTATAATAGATACTC+TGG | 0.549257 | 5.2:-34543441 | MS.gene55406:intron |
| TTCCAGCTTAGAATATTGAT+GGG | 0.551263 | 5.2:+34539954 | None:intergenic |
| TTGATTATGAATAGATACCA+TGG | 0.557943 | 5.2:-34542242 | MS.gene55406:intron |
| ATACCATGGTGAAGCGCAGA+AGG | 0.563010 | 5.2:-34544045 | None:intergenic |
| TGATTATGAATAGATACCAT+GGG | 0.566356 | 5.2:-34542241 | MS.gene55406:intron |
| TTGGTGTTCCAAGGAGGGAA+AGG | 0.567672 | 5.2:-34539584 | MS.gene55406:intron |
| ACCACCTCGTGAATGAACCT+TGG | 0.574663 | 5.2:+34539412 | None:intergenic |
| CAAGTGGGAAGTTTACCTAA+AGG | 0.577689 | 5.2:-34543132 | MS.gene55406:intron |
| CATCATTGGTGTTCCAAGGA+GGG | 0.577846 | 5.2:-34539589 | MS.gene55406:CDS |
| AAGTGTGCGCAACTTGGAGG+AGG | 0.578313 | 5.2:-34542623 | MS.gene55406:intron |
| CAAGAGTAAGAGGCCCTGAA+AGG | 0.578582 | 5.2:-34538700 | MS.gene55406:CDS |
| ACAATCAGAACAAGTACAAG+TGG | 0.580247 | 5.2:-34541957 | MS.gene55406:CDS |
| AAGATAACTTGAGTGCTAAG+TGG | 0.581349 | 5.2:-34539729 | MS.gene55406:CDS |
| CAAACATGACTTGAAAGCAA+AGG | 0.581593 | 5.2:-34539698 | MS.gene55406:CDS |
| AGAATTCATATGTGTTGAAG+TGG | 0.585760 | 5.2:-34540060 | MS.gene55406:CDS |
| AAGGATCAACTCTTCTATCA+GGG | 0.589458 | 5.2:+34539632 | None:intergenic |
| ATACTCTGGAGAGGCGCACA+AGG | 0.592867 | 5.2:-34543427 | MS.gene55406:CDS |
| CTTTAGGTAATCCTATAGGG+TGG | 0.596785 | 5.2:-34540034 | MS.gene55406:CDS |
| TATCTATAATAGATACCGTA+GGG | 0.599957 | 5.2:-34542754 | MS.gene55406:intron |
| GAGTGTGCACATTGTGGAGG+AGG | 0.601120 | 5.2:-34543311 | MS.gene55406:intron |
| ATCAGAACAGCAAATACAAG+TGG | 0.601681 | 5.2:-34542469 | MS.gene55406:CDS |
| TACATGATTTAGGTCAGAAG+AGG | 0.603402 | 5.2:-34540130 | MS.gene55406:intron |
| ATCAGAACAGCAAATACAAG+TGG | 0.607419 | 5.2:-34543148 | MS.gene55406:CDS |
| ATATAAATTTCAGCTCGTGA+AGG | 0.611763 | 5.2:+34538984 | None:intergenic |
| AGTACAAGTGGGAAGTCATG+TGG | 0.612341 | 5.2:-34541945 | MS.gene55406:CDS |
| GAGTTTGCACAATTTGAAGG+AGG | 0.612839 | 5.2:-34543923 | MS.gene55406:intron |
| AAGTGTGCACAATCTGGAGG+AGG | 0.613409 | 5.2:-34542109 | MS.gene55406:intron |
| GTAAGAGGCCCTGAAAGGAA+AGG | 0.614183 | 5.2:-34538695 | MS.gene55406:CDS |
| GGTAATCCTATAGGGTGGGA+AGG | 0.614249 | 5.2:-34540029 | MS.gene55406:CDS |
| TTTAGGTAATCCTATAGGGT+GGG | 0.615133 | 5.2:-34540033 | MS.gene55406:CDS |
| AAGGTTCCACGTCATTCAAG+TGG | 0.618564 | 5.2:-34538653 | MS.gene55406:CDS |
| TTTCAAATGTTAGACAACTG+AGG | 0.623692 | 5.2:-34539021 | MS.gene55406:intron |
| ACATAACTAATATGTTTGAG+TGG | 0.624672 | 5.2:-34539914 | MS.gene55406:CDS |
| TGGCAGTATTGTGAATGAGA+AGG | 0.624743 | 5.2:-34538940 | MS.gene55406:CDS |
| CAACCTTCTGCGCTTCACCA+TGG | 0.625374 | 5.2:+34544042 | None:intergenic |
| GAGTGTGACCAATTTGTTGG+AGG | 0.625460 | 5.2:-34541276 | MS.gene55406:intron |
| TTATCTATAATAGATACCGT+AGG | 0.628158 | 5.2:-34542755 | MS.gene55406:intron |
| ATAACTTGAGTGCTAAGTGG+AGG | 0.640182 | 5.2:-34539726 | MS.gene55406:CDS |
| ATCAGAGCAACAAATACCAG+TGG | 0.644406 | 5.2:-34540288 | MS.gene55406:CDS |
| GATGTGTGGAATCTACCAGA+TGG | 0.645034 | 5.2:-34540083 | MS.gene55406:CDS |
| AAGAGGTTATACCCGAATGT+CGG | 0.647233 | 5.2:-34540105 | MS.gene55406:CDS |
| ACATGATTTAGGTCAGAAGA+GGG | 0.648523 | 5.2:-34540129 | MS.gene55406:intron |
| GAAAAGTGTGCACAATCTGG+AGG | 0.649034 | 5.2:-34542112 | MS.gene55406:CDS |
| TGGGAACCAAGAGTCTTCCA+AGG | 0.650729 | 5.2:-34539429 | MS.gene55406:CDS |
| ACTAAAGCACGATATTGAGA+AGG | 0.651661 | 5.2:+34539613 | None:intergenic |
| GATGAACCACTTGAATGACG+TGG | 0.651820 | 5.2:+34538647 | None:intergenic |
| CAATCAGAACAAGTACAAGT+GGG | 0.652631 | 5.2:-34541956 | MS.gene55406:CDS |
| ATCAGAACAGCAAATACACG+TGG | 0.654486 | 5.2:-34543762 | MS.gene55406:CDS |
| ATAGGTCAAAGTCTACCGAA+AGG | 0.655813 | 5.2:-34542411 | MS.gene55406:intron |
| TCAGAACAGCAAATACAAGT+GGG | 0.656501 | 5.2:-34543147 | MS.gene55406:CDS |
| ATACCCGAATGTCGGATGTG+TGG | 0.657010 | 5.2:-34540097 | MS.gene55406:CDS |
| TTCTTCATAGTAGATACAAG+AGG | 0.657110 | 5.2:-34540356 | MS.gene55406:intron |
| ACATCATTGGTGTTCCAAGG+AGG | 0.660581 | 5.2:-34539590 | MS.gene55406:CDS |
| CTATAATAGATACTCTGGAG+AGG | 0.668961 | 5.2:-34543436 | MS.gene55406:intron |
| TCTTCCAAGGTTCATTCACG+AGG | 0.670430 | 5.2:-34539416 | MS.gene55406:intron |
| TCAGAACAGCAAATACAAGT+GGG | 0.674258 | 5.2:-34542468 | MS.gene55406:CDS |
| CACACTCTACATTTATACGG+TGG | 0.685190 | 5.2:+34543327 | None:intergenic |
| AGATACAAGAGGAAATCCAG+TGG | 0.688047 | 5.2:-34540345 | MS.gene55406:CDS |
| AAGGAATCGCTCAAAATACG+AGG | 0.691214 | 5.2:-34539464 | MS.gene55406:CDS |
| CTATAATAGATACCGTAGGG+AGG | 0.692467 | 5.2:-34542751 | MS.gene55406:intron |
| GTAGAGTGTGCACATTGTGG+AGG | 0.699502 | 5.2:-34543314 | MS.gene55406:CDS |
| ATATGATAGATACCAATGAG+AGG | 0.701065 | 5.2:-34541404 | MS.gene55406:intron |
| ATATGATGAAAACAAGACCG+AGG | 0.701687 | 5.2:-34539674 | MS.gene55406:CDS |
| TATGAATAGATACCATGGGG+AGG | 0.703826 | 5.2:-34542237 | MS.gene55406:intron |
| AATGTAGAGTGTGCACATTG+TGG | 0.707242 | 5.2:-34543317 | MS.gene55406:CDS |
| GATTATGAATAGATACCATG+GGG | 0.717244 | 5.2:-34542240 | MS.gene55406:intron |
| TCAGAACAGCAAATACACGT+GGG | 0.738302 | 5.2:-34543761 | MS.gene55406:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTTTTTTAATTTTAT+AGG | - | chr5.2:34539173-34539192 | MS.gene55406:intron | 0.0% |
| !! | GTTAAAAGATAAAAAAAATT+AGG | + | chr5.2:34539587-34539606 | None:intergenic | 10.0% |
| !! | TTTAAAAGATAAAAAAATCA+AGG | + | chr5.2:34540110-34540129 | None:intergenic | 10.0% |
| !!! | AATTATTTCTTAATATGAAT+GGG | - | chr5.2:34543340-34543359 | MS.gene55406:CDS | 10.0% |
| !!! | ATTAAAAAATAATTTGACTT+TGG | - | chr5.2:34539619-34539638 | MS.gene55406:CDS | 10.0% |
| !!! | TAAAATTATGTAAGTAATTT+TGG | - | chr5.2:34540845-34540864 | MS.gene55406:intron | 10.0% |
| !!! | TAATTATTTCTTAATATGAA+TGG | - | chr5.2:34543339-34543358 | MS.gene55406:CDS | 10.0% |
| !!! | TTAAAAAATAATTTGACTTT+GGG | - | chr5.2:34539620-34539639 | MS.gene55406:CDS | 10.0% |
| !! | AAAAGATAAAAAAAATTAGG+AGG | + | chr5.2:34539584-34539603 | None:intergenic | 15.0% |
| !! | AAAGATAAAAAAAATTAGGA+GGG | + | chr5.2:34539583-34539602 | None:intergenic | 15.0% |
| !! | GTAGACATTAAAAAATAAAT+TGG | - | chr5.2:34540963-34540982 | MS.gene55406:intron | 15.0% |
| !! | TAATTGTACAAATTGTTAAA+GGG | - | chr5.2:34541426-34541445 | MS.gene55406:intron | 15.0% |
| !! | TCATATTTCATTTACTTTAA+TGG | - | chr5.2:34539480-34539499 | MS.gene55406:CDS | 15.0% |
| !! | TTAATTGTACAAATTGTTAA+AGG | - | chr5.2:34541425-34541444 | MS.gene55406:intron | 15.0% |
| !!! | ATTTTTAAAAACGATTTTAG+AGG | + | chr5.2:34540752-34540771 | None:intergenic | 15.0% |
| !!! | ATTTTTTAATTTCTACAAGT+GGG | + | chr5.2:34539609-34539628 | None:intergenic | 15.0% |
| !!! | TATTTTTTAATTTCTACAAG+TGG | + | chr5.2:34539610-34539629 | None:intergenic | 15.0% |
| !!! | TTACTTTCTAAAAGAAAATT+TGG | + | chr5.2:34541601-34541620 | None:intergenic | 15.0% |
| !!! | TTATTTTTAATTGCTACAAA+TGG | + | chr5.2:34538926-34538945 | None:intergenic | 15.0% |
| !! | AAAAGAAACTGTTATGATAT+AGG | + | chr5.2:34541983-34542002 | None:intergenic | 20.0% |
| !! | AAAAGATTACTTAAAGGTAA+GGG | - | chr5.2:34540505-34540524 | MS.gene55406:intron | 20.0% |
| !! | AAAGAGAAAATTTGAGAAAA+AGG | - | chr5.2:34541891-34541910 | MS.gene55406:intron | 20.0% |
| !! | AAATAAGTAACATCAACAAA+AGG | - | chr5.2:34542915-34542934 | MS.gene55406:intron | 20.0% |
| !! | AAGATCTAATGTTGAAAATA+GGG | - | chr5.2:34543777-34543796 | MS.gene55406:CDS | 20.0% |
| !! | AATAAACCAATTGATAAACA+AGG | + | chr5.2:34540721-34540740 | None:intergenic | 20.0% |
| !! | ACAGTTAAACATATCAAATT+AGG | + | chr5.2:34538829-34538848 | None:intergenic | 20.0% |
| !! | ACATACATATGTAAACATAT+AGG | + | chr5.2:34539324-34539343 | None:intergenic | 20.0% |
| !! | ATAACTTCTATATATAGTGA+AGG | + | chr5.2:34542860-34542879 | None:intergenic | 20.0% |
| !! | ATAATAAATATGACACTTCA+AGG | + | chr5.2:34539152-34539171 | None:intergenic | 20.0% |
| !! | ATGAGTAAAAGATTACTTAA+AGG | - | chr5.2:34540499-34540518 | MS.gene55406:intron | 20.0% |
| !! | ATGAGTAAAAGTTTAACTAA+AGG | - | chr5.2:34542168-34542187 | MS.gene55406:CDS | 20.0% |
| !! | ATTATCTATAATAGATACTC+TGG | - | chr5.2:34538957-34538976 | MS.gene55406:CDS | 20.0% |
| !! | CAGTTAAACATATCAAATTA+GGG | + | chr5.2:34538828-34538847 | None:intergenic | 20.0% |
| !! | GTAAAAAATATTTATACACG+AGG | + | chr5.2:34540679-34540698 | None:intergenic | 20.0% |
| !! | TAAAAGATTACTTAAAGGTA+AGG | - | chr5.2:34540504-34540523 | MS.gene55406:intron | 20.0% |
| !! | TACATATGTATGTATCATTT+AGG | - | chr5.2:34539331-34539350 | MS.gene55406:intron | 20.0% |
| !! | TCTTCAAAAAGTTGAATTAT+AGG | + | chr5.2:34543916-34543935 | None:intergenic | 20.0% |
| !! | TTAGAAAAAACAATACTCTT+GGG | + | chr5.2:34540828-34540847 | None:intergenic | 20.0% |
| !! | TTATTACATGTGTATCATTT+AGG | - | chr5.2:34540870-34540889 | MS.gene55406:intron | 20.0% |
| !! | TTGTTTATTACTGAAAAAGT+GGG | - | chr5.2:34543208-34543227 | MS.gene55406:intron | 20.0% |
| !! | TTTAAAAACACTATTCAAAC+AGG | + | chr5.2:34540531-34540550 | None:intergenic | 20.0% |
| !! | TTTAGAAAAAACAATACTCT+TGG | + | chr5.2:34540829-34540848 | None:intergenic | 20.0% |
| !! | TTTGTTAAAAATAAATGTGC+AGG | - | chr5.2:34540021-34540040 | MS.gene55406:CDS | 20.0% |
| !! | TTTGTTTATTACTGAAAAAG+TGG | - | chr5.2:34543207-34543226 | MS.gene55406:intron | 20.0% |
| !!! | AAAAAACTTTTAAATGCACT+GGG | - | chr5.2:34542393-34542412 | MS.gene55406:intron | 20.0% |
| !!! | ACAAATTAGAAAATTTGCTT+GGG | - | chr5.2:34543803-34543822 | MS.gene55406:CDS | 20.0% |
| !!! | AGTGTAAATTGATTTATGTT+TGG | - | chr5.2:34541278-34541297 | MS.gene55406:CDS | 20.0% |
| !!! | AGTTTTTAAAATGATGAAAC+AGG | + | chr5.2:34540636-34540655 | None:intergenic | 20.0% |
| !!! | CACTTATATTGTAGTTATTT+TGG | + | chr5.2:34540267-34540286 | None:intergenic | 20.0% |
| !!! | GAAAAAATTAAAGTCCATTT+TGG | + | chr5.2:34541385-34541404 | None:intergenic | 20.0% |
| !!! | GTTACTTATTTTCTTTAACA+TGG | + | chr5.2:34542906-34542925 | None:intergenic | 20.0% |
| !!! | GTTTGAATTAAAATTGCTTT+TGG | - | chr5.2:34541348-34541367 | MS.gene55406:CDS | 20.0% |
| !!! | TAAAAAACTTTTAAATGCAC+TGG | - | chr5.2:34542392-34542411 | MS.gene55406:intron | 20.0% |
| !!! | TATTTTTTAATGTCTACAAG+TGG | + | chr5.2:34540960-34540979 | None:intergenic | 20.0% |
| !!! | TTATTTCCTTGTTTATCAAT+TGG | - | chr5.2:34540712-34540731 | MS.gene55406:intron | 20.0% |
| !!! | TTGTAAGAATTTGAATTTTC+AGG | - | chr5.2:34543493-34543512 | MS.gene55406:intron | 20.0% |
| !!! | TTTGTCTTATATTTTGTGTA+GGG | - | chr5.2:34543586-34543605 | MS.gene55406:intron | 20.0% |
| !!! | TTTTGTCTTATATTTTGTGT+AGG | - | chr5.2:34543585-34543604 | MS.gene55406:intron | 20.0% |
| ! | AAAAAACTTCACTTACCTTT+AGG | + | chr5.2:34538712-34538731 | None:intergenic | 25.0% |
| ! | AAACATAAAATGTGTACAAC+AGG | + | chr5.2:34543189-34543208 | None:intergenic | 25.0% |
| ! | AACATAAAATGTGTACAACA+GGG | + | chr5.2:34543188-34543207 | None:intergenic | 25.0% |
| ! | AACTGTTATGATATAGGATA+AGG | + | chr5.2:34541977-34541996 | None:intergenic | 25.0% |
| ! | AAGAAGAAAATCTGATGAAA+TGG | - | chr5.2:34540583-34540602 | MS.gene55406:intron | 25.0% |
| ! | AATGATACACAGTTAAACAT+AGG | + | chr5.2:34538837-34538856 | None:intergenic | 25.0% |
| ! | ACATAACTAATATGTTTGAG+TGG | - | chr5.2:34542484-34542503 | MS.gene55406:CDS | 25.0% |
| ! | AGATACAAGAGAGAATTTAA+TGG | - | chr5.2:34539872-34539891 | MS.gene55406:intron | 25.0% |
| ! | ATACTTTAGGTAATCCTATA+GGG | - | chr5.2:34542361-34542380 | MS.gene55406:intron | 25.0% |
| ! | ATATTAGTTATGTTCAACTC+TGG | + | chr5.2:34542477-34542496 | None:intergenic | 25.0% |
| ! | ATGTTAGACAAAGACAAATT+AGG | + | chr5.2:34539395-34539414 | None:intergenic | 25.0% |
| ! | GAAGATCTAATGTTGAAAAT+AGG | - | chr5.2:34543776-34543795 | MS.gene55406:CDS | 25.0% |
| ! | GAATTCAAAATCAAAAAGCA+TGG | + | chr5.2:34540359-34540378 | None:intergenic | 25.0% |
| ! | GATTATGATGATTTACACTT+AGG | - | chr5.2:34543960-34543979 | MS.gene55406:CDS | 25.0% |
| ! | TAGAAAAAACAATACTCTTG+GGG | + | chr5.2:34540827-34540846 | None:intergenic | 25.0% |
| ! | TATCTATAATAGATACCGTA+GGG | - | chr5.2:34539644-34539663 | MS.gene55406:CDS | 25.0% |
| ! | TCTTATCAATTCATGTTGTT+TGG | - | chr5.2:34541322-34541341 | MS.gene55406:CDS | 25.0% |
| ! | TCTTTATAGTATCTACAAGA+AGG | - | chr5.2:34540377-34540396 | MS.gene55406:intron | 25.0% |
| ! | TGATTATGAATAGATACCAT+GGG | - | chr5.2:34540157-34540176 | MS.gene55406:intron | 25.0% |
| ! | TGTTAGACAAAGACAAATTA+GGG | + | chr5.2:34539394-34539413 | None:intergenic | 25.0% |
| ! | TGTTTACCTATGTATCATTT+AGG | - | chr5.2:34540056-34540075 | MS.gene55406:CDS | 25.0% |
| ! | TTATCTATAATAGATACCGT+AGG | - | chr5.2:34539643-34539662 | MS.gene55406:CDS | 25.0% |
| ! | TTGATTATGAATAGATACCA+TGG | - | chr5.2:34540156-34540175 | MS.gene55406:intron | 25.0% |
| ! | TTGGTGTAAATATATATGCT+TGG | + | chr5.2:34541582-34541601 | None:intergenic | 25.0% |
| !! | AGGAAATAAAAAAACTTGCT+TGG | + | chr5.2:34540701-34540720 | None:intergenic | 25.0% |
| !! | ATGTATGTATCATTTAGGTT+TGG | - | chr5.2:34539336-34539355 | MS.gene55406:intron | 25.0% |
| !! | CAAGCAAATTTTCTAATTTG+TGG | + | chr5.2:34543804-34543823 | None:intergenic | 25.0% |
| !! | CACAAATTAGAAAATTTGCT+TGG | - | chr5.2:34543802-34543821 | MS.gene55406:CDS | 25.0% |
| !! | CATTTATATTGTGGTTGTTT+TGG | + | chr5.2:34541100-34541119 | None:intergenic | 25.0% |
| !! | GTTGAATATCCTATTTCTTA+TGG | - | chr5.2:34538667-34538686 | MS.gene55406:CDS | 25.0% |
| !! | TGAATTAAAAAAGCATATGG+TGG | - | chr5.2:34543609-34543628 | MS.gene55406:intron | 25.0% |
| !! | TGATTTTTGATAGAACACTA+TGG | + | chr5.2:34543100-34543119 | None:intergenic | 25.0% |
| !! | TTTTGTTAGGAAATAGGATA+AGG | - | chr5.2:34541168-34541187 | MS.gene55406:intron | 25.0% |
| AAAACACTACACTTACCTTT+AGG | + | chr5.2:34539284-34539303 | None:intergenic | 30.0% | |
| AAACATGACTTGAAAGCAAA+GGG | - | chr5.2:34542701-34542720 | MS.gene55406:CDS | 30.0% | |
| AAACCATACATCATATGCAA+AGG | + | chr5.2:34542233-34542252 | None:intergenic | 30.0% | |
| ACCAAACCTAAATGATACAT+AGG | + | chr5.2:34539340-34539359 | None:intergenic | 30.0% | |
| AGAATTCATATGTGTTGAAG+TGG | - | chr5.2:34542338-34542357 | MS.gene55406:intron | 30.0% | |
| AGACTCAAGATTCTACAAAT+TGG | - | chr5.2:34543659-34543678 | MS.gene55406:intron | 30.0% | |
| ATAAGGATTAAGTGTGTGTT+TGG | - | chr5.2:34541185-34541204 | MS.gene55406:intron | 30.0% | |
| ATACCTTTGCATATGATGTA+TGG | - | chr5.2:34542227-34542246 | MS.gene55406:CDS | 30.0% | |
| ATATAAATTTCAGCTCGTGA+AGG | + | chr5.2:34543417-34543436 | None:intergenic | 30.0% | |
| ATATGATAGATACCAATGAG+AGG | - | chr5.2:34540994-34541013 | MS.gene55406:intron | 30.0% | |
| ATGGGTAAAAGTTTACCTAA+AGG | - | chr5.2:34538694-34538713 | MS.gene55406:CDS | 30.0% | |
| ATTCTCGTGATTTAATCAAC+AGG | + | chr5.2:34541736-34541755 | None:intergenic | 30.0% | |
| ATTTCATACCTCCAACAAAT+TGG | + | chr5.2:34541133-34541152 | None:intergenic | 30.0% | |
| CAATCAATAGCTTCAATCAT+CGG | + | chr5.2:34543533-34543552 | None:intergenic | 30.0% | |
| CACACTCTTCATTTATATTG+TGG | + | chr5.2:34541109-34541128 | None:intergenic | 30.0% | |
| CCTATTCTACCAAAAGAAAT+AGG | + | chr5.2:34539972-34539991 | None:intergenic | 30.0% | |
| CCTTAGAGCTATCAATTAAT+TGG | + | chr5.2:34540237-34540256 | None:intergenic | 30.0% | |
| CTCATTCTACTAACAGAATT+AGG | + | chr5.2:34542153-34542172 | None:intergenic | 30.0% | |
| GACTCAAGATTCTACAAATT+GGG | - | chr5.2:34543660-34543679 | MS.gene55406:intron | 30.0% | |
| GATACTTTAGGTAATCCTAT+AGG | - | chr5.2:34542360-34542379 | MS.gene55406:intron | 30.0% | |
| GATTATGAATAGATACCATG+GGG | - | chr5.2:34540158-34540177 | MS.gene55406:intron | 30.0% | |
| GGTTAAGAAAGTGAAAATGT+TGG | - | chr5.2:34541912-34541931 | MS.gene55406:CDS | 30.0% | |
| TAATATGTTTGAGTGGATAC+AGG | - | chr5.2:34542491-34542510 | MS.gene55406:CDS | 30.0% | |
| TCCTAATGATTTCTCTAGTA+AGG | - | chr5.2:34544002-34544021 | MS.gene55406:CDS | 30.0% | |
| TCCTTACTAGAGAAATCATT+AGG | + | chr5.2:34544006-34544025 | None:intergenic | 30.0% | |
| TCGTAAGACATACAGTAAAA+AGG | + | chr5.2:34542562-34542581 | None:intergenic | 30.0% | |
| TCTAACATGCACAAACAAAA+TGG | - | chr5.2:34539407-34539426 | MS.gene55406:intron | 30.0% | |
| TGGATGTGAAATTACCAAAA+TGG | - | chr5.2:34541368-34541387 | MS.gene55406:CDS | 30.0% | |
| TGTTTACATGTGTCTCATTT+AGG | - | chr5.2:34538765-34538784 | MS.gene55406:CDS | 30.0% | |
| TTCCAGCTTAGAATATTGAT+GGG | + | chr5.2:34542447-34542466 | None:intergenic | 30.0% | |
| TTCTCGTGATTTAATCAACA+GGG | + | chr5.2:34541735-34541754 | None:intergenic | 30.0% | |
| TTCTTCATAGTAGATACAAG+AGG | - | chr5.2:34542042-34542061 | MS.gene55406:intron | 30.0% | |
| TTGAATGCTGTTAGAAAAAG+TGG | - | chr5.2:34540193-34540212 | MS.gene55406:intron | 30.0% | |
| TTGAATGTTGTTCGAAAAAG+TGG | - | chr5.2:34538376-34538395 | MS.gene55406:CDS | 30.0% | |
| TTTCAAATGTTAGACAACTG+AGG | - | chr5.2:34543377-34543396 | MS.gene55406:CDS | 30.0% | |
| TTTCCAGCTTAGAATATTGA+TGG | + | chr5.2:34542448-34542467 | None:intergenic | 30.0% | |
| ! | AAAAAGCATGGAACTTCAAA+AGG | + | chr5.2:34540347-34540366 | None:intergenic | 30.0% |
| ! | AAGCATTTAACGTGATTTTG+GGG | + | chr5.2:34541554-34541573 | None:intergenic | 30.0% |
| ! | ACCTATGTATCATTTAGGTT+TGG | - | chr5.2:34540061-34540080 | MS.gene55406:CDS | 30.0% |
| ! | AGAGAACTAGTTTATGGATT+TGG | - | chr5.2:34541825-34541844 | MS.gene55406:intron | 30.0% |
| ! | ATTAAAAAAGCATATGGTGG+AGG | - | chr5.2:34543612-34543631 | MS.gene55406:intron | 30.0% |
| ! | CAAGCATTTAACGTGATTTT+GGG | + | chr5.2:34541555-34541574 | None:intergenic | 30.0% |
| ! | CCAATTAATTGATAGCTCTA+AGG | - | chr5.2:34540234-34540253 | MS.gene55406:CDS | 30.0% |
| ! | CCTATTTCTTATGGTAGAAT+GGG | - | chr5.2:34538676-34538695 | MS.gene55406:CDS | 30.0% |
| ! | CTCAGTTTTTGTTAGGAAAT+AGG | - | chr5.2:34541162-34541181 | MS.gene55406:intron | 30.0% |
| ! | CTGATTGTGATTCATGATTT+TGG | + | chr5.2:34539914-34539933 | None:intergenic | 30.0% |
| ! | CTGTTTTACTGTGTTTGTTT+TGG | + | chr5.2:34538453-34538472 | None:intergenic | 30.0% |
| ! | GAATTGATTCCAAGCATTTA+TGG | + | chr5.2:34541480-34541499 | None:intergenic | 30.0% |
| ! | GCATAAAGTTTAAAGCTGTT+GGG | - | chr5.2:34539671-34539690 | MS.gene55406:CDS | 30.0% |
| ! | GGGTGAATTAAAAAAGCATA+TGG | - | chr5.2:34543606-34543625 | MS.gene55406:intron | 30.0% |
| ! | TCAAGCATTTAACGTGATTT+TGG | + | chr5.2:34541556-34541575 | None:intergenic | 30.0% |
| ! | TCCTATTTCTTATGGTAGAA+TGG | - | chr5.2:34538675-34538694 | MS.gene55406:CDS | 30.0% |
| ! | TTGTTTGCTCAGTTTTTGTT+AGG | - | chr5.2:34541155-34541174 | MS.gene55406:intron | 30.0% |
| !! | CACACTTTTTGTTTATACGA+TGG | + | chr5.2:34539762-34539781 | None:intergenic | 30.0% |
| !! | CCTATTTCTTTTGGTAGAAT+AGG | - | chr5.2:34539969-34539988 | MS.gene55406:CDS | 30.0% |
| !! | GCTGAATATCCTATTTCTTT+TGG | - | chr5.2:34539960-34539979 | MS.gene55406:CDS | 30.0% |
| !! | TCACACTCATTTTTCTTTGT+TGG | + | chr5.2:34541858-34541877 | None:intergenic | 30.0% |
| !! | TTGTATTTGCTGTTCTGATT+GGG | + | chr5.2:34539249-34539268 | None:intergenic | 30.0% |
| !! | TTTGATTGTGTTTTGGACTT+TGG | + | chr5.2:34540800-34540819 | None:intergenic | 30.0% |
| AACTACAAGTGACAGTGATT+GGG | - | chr5.2:34544032-34544051 | MS.gene55406:CDS | 35.0% | |
| AAGATAACTTGAGTGCTAAG+TGG | - | chr5.2:34542669-34542688 | MS.gene55406:CDS | 35.0% | |
| AAGGATCAACTCTTCTATCA+GGG | + | chr5.2:34542769-34542788 | None:intergenic | 35.0% | |
| AAGGTAGTGATTGACTAGAT+AGG | + | chr5.2:34541695-34541714 | None:intergenic | 35.0% | |
| ACAATCAGAACAAGTACAAG+TGG | - | chr5.2:34540441-34540460 | MS.gene55406:intron | 35.0% | |
| ACACATATGAATTCTCCATC+TGG | + | chr5.2:34542333-34542352 | None:intergenic | 35.0% | |
| ACATGATTTAGGTCAGAAGA+GGG | - | chr5.2:34542269-34542288 | MS.gene55406:intron | 35.0% | |
| ACTAAAGCACGATATTGAGA+AGG | + | chr5.2:34542788-34542807 | None:intergenic | 35.0% | |
| AGAAAGTGAAAATGTTGGAG+AGG | - | chr5.2:34541917-34541936 | MS.gene55406:CDS | 35.0% | |
| ATACCAATGAGAGGAACAAA+AGG | - | chr5.2:34541003-34541022 | MS.gene55406:intron | 35.0% | |
| ATATGACACTTCAAGGCAAA+AGG | + | chr5.2:34539145-34539164 | None:intergenic | 35.0% | |
| ATATGATGAAAACAAGACCG+AGG | - | chr5.2:34542724-34542743 | MS.gene55406:CDS | 35.0% | |
| ATCAACAGGGTTCTGTATAT+AGG | + | chr5.2:34541722-34541741 | None:intergenic | 35.0% | |
| ATCAGAACAGCAAATACAAG+TGG | - | chr5.2:34539250-34539269 | MS.gene55406:intron | 35.0% | |
| ATCGTGCTTTAGTACATCAT+TGG | - | chr5.2:34542795-34542814 | MS.gene55406:intron | 35.0% | |
| CAAACACTACACTTACCTTT+CGG | + | chr5.2:34540005-34540024 | None:intergenic | 35.0% | |
| CAAACATGACTTGAAAGCAA+AGG | - | chr5.2:34542700-34542719 | MS.gene55406:CDS | 35.0% | |
| CAAAGAAAAATGAGTGTGAG+AGG | - | chr5.2:34541859-34541878 | MS.gene55406:intron | 35.0% | |
| CAATCAGAACAAGTACAAGT+GGG | - | chr5.2:34540442-34540461 | MS.gene55406:intron | 35.0% | |
| CCCATTCTACCATAAGAAAT+AGG | + | chr5.2:34538679-34538698 | None:intergenic | 35.0% | |
| CGAATGTTGTTCGAAAAAGT+GGG | - | chr5.2:34541027-34541046 | MS.gene55406:intron | 35.0% | |
| CTCATTCTACCAAATGAAGT+AGG | + | chr5.2:34540484-34540503 | None:intergenic | 35.0% | |
| CTTCTGACCTAAATCATGTA+TGG | + | chr5.2:34542268-34542287 | None:intergenic | 35.0% | |
| GAAAGTGAAAATGTTGGAGA+GGG | - | chr5.2:34541918-34541937 | MS.gene55406:CDS | 35.0% | |
| GAAGAGTTTGCACAATTTGA+AGG | - | chr5.2:34538472-34538491 | MS.gene55406:intron | 35.0% | |
| GAGATTTATTGATCCAATGG+TGG | - | chr5.2:34539504-34539523 | MS.gene55406:intron | 35.0% | |
| GGTGAGATTTATTGATCCAA+TGG | - | chr5.2:34539501-34539520 | MS.gene55406:intron | 35.0% | |
| GGTTCTGTATATAGGGATAA+AGG | + | chr5.2:34541714-34541733 | None:intergenic | 35.0% | |
| GTACTTGTTCTGATTGTGAT+TGG | + | chr5.2:34540438-34540457 | None:intergenic | 35.0% | |
| GTGACATCCATACATGATTT+AGG | - | chr5.2:34542258-34542277 | MS.gene55406:intron | 35.0% | |
| GTGCACACTCTACATTTATA+CGG | + | chr5.2:34539077-34539096 | None:intergenic | 35.0% | |
| TACATGATTTAGGTCAGAAG+AGG | - | chr5.2:34542268-34542287 | MS.gene55406:intron | 35.0% | |
| TCAACAGGGTTCTGTATATA+GGG | + | chr5.2:34541721-34541740 | None:intergenic | 35.0% | |
| TCAGAACAGCAAATACAAGT+GGG | - | chr5.2:34539251-34539270 | MS.gene55406:intron | 35.0% | |
| TGAGACACATGTAAACAAAG+AGG | + | chr5.2:34538762-34538781 | None:intergenic | 35.0% | |
| TGTGTTGAAGTGGATACTTT+AGG | - | chr5.2:34542348-34542367 | MS.gene55406:intron | 35.0% | |
| TTTAGGTAATCCTATAGGGT+GGG | - | chr5.2:34542365-34542384 | MS.gene55406:intron | 35.0% | |
| TTTGTTGCTCTGATTGTGAT+TGG | + | chr5.2:34542104-34542123 | None:intergenic | 35.0% | |
| ! | AAGTTTAAAGCTGTTGGGAA+AGG | - | chr5.2:34539676-34539695 | MS.gene55406:CDS | 35.0% |
| ! | ACATGTGTCTCATTTAGGTT+TGG | - | chr5.2:34538770-34538789 | MS.gene55406:CDS | 35.0% |
| ! | AGCATTTAACGTGATTTTGG+GGG | + | chr5.2:34541553-34541572 | None:intergenic | 35.0% |
| ! | ATACGAGGATTTTCATTGCA+TGG | - | chr5.2:34542949-34542968 | MS.gene55406:intron | 35.0% |
| ! | CGCATAAAGTTTAAAGCTGT+TGG | - | chr5.2:34539670-34539689 | MS.gene55406:CDS | 35.0% |
| ! | CTATAATAGATACTCTGGAG+AGG | - | chr5.2:34538962-34538981 | MS.gene55406:CDS | 35.0% |
| ! | CTGATTGGGATTCATGATTT+TGG | + | chr5.2:34539235-34539254 | None:intergenic | 35.0% |
| ! | CTGATTGTGGTACATCATTT+TGG | + | chr5.2:34538621-34538640 | None:intergenic | 35.0% |
| ! | GTAGAATCTTGAGTCTTTTG+AGG | + | chr5.2:34543655-34543674 | None:intergenic | 35.0% |
| ! | GTTTCAACATGATTTTCCAC+TGG | + | chr5.2:34542129-34542148 | None:intergenic | 35.0% |
| ! | TACGAGGATTTTCATTGCAT+GGG | - | chr5.2:34542950-34542969 | MS.gene55406:intron | 35.0% |
| ! | TGTTTATACGATGGTCGTTT+TGG | + | chr5.2:34539753-34539772 | None:intergenic | 35.0% |
| !! | ACTTTTGATTGCACTCTTCA+TGG | + | chr5.2:34543287-34543306 | None:intergenic | 35.0% |
| !! | CTCATTTTTCTTTGTTGGAG+AGG | + | chr5.2:34541853-34541872 | None:intergenic | 35.0% |
| !! | CTTGTATTTGCTGTTCTGAT+TGG | + | chr5.2:34539250-34539269 | None:intergenic | 35.0% |
| !! | GAGAAATCATTAGGAGTACT+TGG | + | chr5.2:34543997-34544016 | None:intergenic | 35.0% |
| !! | GATTCATGATTTTGGTGACA+TGG | + | chr5.2:34539906-34539925 | None:intergenic | 35.0% |
| !! | TGTATTTGCTGTTCTGATTG+TGG | + | chr5.2:34538634-34538653 | None:intergenic | 35.0% |
| !!! | CCACTTTTTCGAACAACATT+CGG | + | chr5.2:34538379-34538398 | None:intergenic | 35.0% |
| AAACAAGACCGAGGAAGAAA+TGG | - | chr5.2:34542733-34542752 | MS.gene55406:CDS | 40.0% | |
| AAAGGATCTGTACGTTGTCT+TGG | - | chr5.2:34543721-34543740 | MS.gene55406:CDS | 40.0% | |
| AAATTAGGAGGGCAACTCTA+TGG | + | chr5.2:34539572-34539591 | None:intergenic | 40.0% | |
| AACTCTTCTATCAGGGATGT+AGG | + | chr5.2:34542762-34542781 | None:intergenic | 40.0% | |
| AAGAGGTTATACCCGAATGT+CGG | - | chr5.2:34542293-34542312 | MS.gene55406:intron | 40.0% | |
| AAGGAATCGCTCAAAATACG+AGG | - | chr5.2:34542934-34542953 | MS.gene55406:intron | 40.0% | |
| AATGAACCTTGGAAGACTCT+TGG | + | chr5.2:34542978-34542997 | None:intergenic | 40.0% | |
| AATGTAGAGTGTGCACATTG+TGG | - | chr5.2:34539081-34539100 | MS.gene55406:intron | 40.0% | |
| AGATACAAGAGGAAATCCAG+TGG | - | chr5.2:34542053-34542072 | MS.gene55406:intron | 40.0% | |
| AGGCACGAGAGAGAATTTAA+TGG | - | chr5.2:34539193-34539212 | MS.gene55406:intron | 40.0% | |
| AGGTTGAGTGTTCGAAAAAG+TGG | - | chr5.2:34538991-34539010 | MS.gene55406:CDS | 40.0% | |
| AGTGTAGCACCATAAATGCT+TGG | - | chr5.2:34541468-34541487 | MS.gene55406:intron | 40.0% | |
| ATAACTTGAGTGCTAAGTGG+AGG | - | chr5.2:34542672-34542691 | MS.gene55406:CDS | 40.0% | |
| ATAGGTCAAAGTCTACCGAA+AGG | - | chr5.2:34539987-34540006 | MS.gene55406:CDS | 40.0% | |
| ATCAGAACAGCAAATACACG+TGG | - | chr5.2:34538636-34538655 | MS.gene55406:CDS | 40.0% | |
| ATCAGAGCAACAAATACCAG+TGG | - | chr5.2:34542110-34542129 | MS.gene55406:CDS | 40.0% | |
| ATCTACAAGAAGGAGCCTAA+TGG | - | chr5.2:34540387-34540406 | MS.gene55406:intron | 40.0% | |
| CAACTACAAGTGACAGTGAT+TGG | - | chr5.2:34544031-34544050 | MS.gene55406:CDS | 40.0% | |
| CAAGTGGGAAGTTTACCTAA+AGG | - | chr5.2:34539266-34539285 | MS.gene55406:intron | 40.0% | |
| CACACTCTACATTTATACGG+TGG | + | chr5.2:34539074-34539093 | None:intergenic | 40.0% | |
| CCGAATGTTGTTCGAAAAAG+TGG | - | chr5.2:34541026-34541045 | MS.gene55406:intron | 40.0% | |
| CGAGAGAAGTTTCATTGTAG+AGG | - | chr5.2:34541943-34541962 | MS.gene55406:CDS | 40.0% | |
| CTATAATAGATACCGTAGGG+AGG | - | chr5.2:34539647-34539666 | MS.gene55406:CDS | 40.0% | |
| CTCCCATCAATATTCTAAGC+TGG | - | chr5.2:34542442-34542461 | MS.gene55406:CDS | 40.0% | |
| CTTTAGGTAATCCTATAGGG+TGG | - | chr5.2:34542364-34542383 | MS.gene55406:intron | 40.0% | |
| GAAGGATCAACTCTTCTATC+AGG | + | chr5.2:34542770-34542789 | None:intergenic | 40.0% | |
| GACGTATACTCAAGAGTAAG+AGG | - | chr5.2:34543688-34543707 | MS.gene55406:intron | 40.0% | |
| GAGGTGTGGAAAATTGTTGT+TGG | - | chr5.2:34538494-34538513 | MS.gene55406:intron | 40.0% | |
| GAGTTTGCACAATTTGAAGG+AGG | - | chr5.2:34538475-34538494 | MS.gene55406:intron | 40.0% | |
| GCAAGTCTTAACCACCAAAA+TGG | - | chr5.2:34540412-34540431 | MS.gene55406:intron | 40.0% | |
| GTACAGATCCTTTCCTTTCA+GGG | + | chr5.2:34543714-34543733 | None:intergenic | 40.0% | |
| GTGGAATCTCCTACTTCATT+TGG | - | chr5.2:34540472-34540491 | MS.gene55406:intron | 40.0% | |
| GTTCTACAAGCTTACCATTC+AGG | - | chr5.2:34541800-34541819 | MS.gene55406:intron | 40.0% | |
| TAAGTGTGTGTTTGGTTGTG+CGG | - | chr5.2:34541193-34541212 | MS.gene55406:intron | 40.0% | |
| TAGAAAAAGTGGCAAAGCAC+AGG | - | chr5.2:34540204-34540223 | MS.gene55406:intron | 40.0% | |
| TATGAATAGATACCATGGGG+AGG | - | chr5.2:34540161-34540180 | MS.gene55406:intron | 40.0% | |
| TCAGAACAGCAAATACACGT+GGG | - | chr5.2:34538637-34538656 | MS.gene55406:CDS | 40.0% | |
| TCGAAAAAGTGGCAAATCAC+AGG | - | chr5.2:34538387-34538406 | MS.gene55406:CDS | 40.0% | |
| TGGCAGTATTGTGAATGAGA+AGG | - | chr5.2:34543458-34543477 | MS.gene55406:intron | 40.0% | |
| TGTTAGACAACTGAGGCTAA+TGG | - | chr5.2:34543384-34543403 | MS.gene55406:CDS | 40.0% | |
| TTTGCAAGCTATAGCTCAAG+AGG | - | chr5.2:34543882-34543901 | MS.gene55406:intron | 40.0% | |
| TTTGTTTGCTCGGTCAATTC+AGG | + | chr5.2:34542638-34542657 | None:intergenic | 40.0% | |
| ! | AACAAAAAGTGTGCGCAACT+TGG | - | chr5.2:34539769-34539788 | MS.gene55406:CDS | 40.0% |
| ! | AACTAGTTCTCTCTCCTGAA+TGG | + | chr5.2:34541817-34541836 | None:intergenic | 40.0% |
| ! | ACAAGTGTCTTTTCCACCAT+TGG | - | chr5.2:34539443-34539462 | MS.gene55406:CDS | 40.0% |
| ! | AGTACATCATTGGTGTTCCA+AGG | - | chr5.2:34542805-34542824 | MS.gene55406:intron | 40.0% |
| ! | AGTGAAAAGTGTGCACAATC+TGG | - | chr5.2:34540283-34540302 | MS.gene55406:CDS | 40.0% |
| ! | CAATCACTGTCACTTGTAGT+TGG | + | chr5.2:34544033-34544052 | None:intergenic | 40.0% |
| ! | CAGGAGAGAGAACTAGTTTA+TGG | - | chr5.2:34541819-34541838 | MS.gene55406:intron | 40.0% |
| ! | CATTTATACGGTGGCTGTTT+TGG | + | chr5.2:34539065-34539084 | None:intergenic | 40.0% |
| ! | CTGATTGTGATTGGTCACTT+TGG | + | chr5.2:34542095-34542114 | None:intergenic | 40.0% |
| ! | GAAGAGTGTGACCAATTTGT+TGG | - | chr5.2:34541119-34541138 | MS.gene55406:intron | 40.0% |
| ! | GATGCGACTTTTTGATCCAA+TGG | + | chr5.2:34539462-34539481 | None:intergenic | 40.0% |
| ! | GATTGGTCACTTTGGAGATT+AGG | + | chr5.2:34542087-34542106 | None:intergenic | 40.0% |
| ! | TTTAAAGCTGTTGGGAAAGG+TGG | - | chr5.2:34539679-34539698 | MS.gene55406:CDS | 40.0% |
| ! | TTTTTACCTTCCCACCCTAT+AGG | + | chr5.2:34542378-34542397 | None:intergenic | 40.0% |
| !! | ATTGTGATTGGCCATTTTGG+TGG | + | chr5.2:34540426-34540445 | None:intergenic | 40.0% |
| !! | CTGATTGTGATTGGCCATTT+TGG | + | chr5.2:34540429-34540448 | None:intergenic | 40.0% |
| !! | GCTTCAGCTTGAATCGATTT+TGG | - | chr5.2:34541527-34541546 | MS.gene55406:intron | 40.0% |
| !! | GGGCTTGTTTGATTGTGTTT+TGG | + | chr5.2:34540807-34540826 | None:intergenic | 40.0% |
| !! | GGTTAAGACTTGCTACCATT+AGG | + | chr5.2:34540405-34540424 | None:intergenic | 40.0% |
| !! | TTAGGAGTACTTGGAGCATT+AGG | + | chr5.2:34543988-34544007 | None:intergenic | 40.0% |
| AAACTTTATGCGCCTCCCTA+CGG | + | chr5.2:34539662-34539681 | None:intergenic | 45.0% | |
| AAGGTTCCACGTCATTCAAG+TGG | - | chr5.2:34543745-34543764 | MS.gene55406:CDS | 45.0% | |
| AGTACAAGTGGGAAGTCATG+TGG | - | chr5.2:34540453-34540472 | MS.gene55406:intron | 45.0% | |
| ATCTGTACGTTGTCTTGGCA+AGG | - | chr5.2:34543726-34543745 | MS.gene55406:CDS | 45.0% | |
| ATTCCACACATCCGACATTC+GGG | + | chr5.2:34542307-34542326 | None:intergenic | 45.0% | |
| CGTACAGATCCTTTCCTTTC+AGG | + | chr5.2:34543715-34543734 | None:intergenic | 45.0% | |
| GAGACTCGTACTCGTAAAGA+TGG | - | chr5.2:34543438-34543457 | MS.gene55406:intron | 45.0% | |
| GATGAACCACTTGAATGACG+TGG | + | chr5.2:34543754-34543773 | None:intergenic | 45.0% | |
| GATGTGTGGAATCTACCAGA+TGG | - | chr5.2:34542315-34542334 | MS.gene55406:intron | 45.0% | |
| GATTCCACACATCCGACATT+CGG | + | chr5.2:34542308-34542327 | None:intergenic | 45.0% | |
| GTGGAAAAGACACTTGTGCA+TGG | + | chr5.2:34539440-34539459 | None:intergenic | 45.0% | |
| TCTTCCAAGGTTCATTCACG+AGG | - | chr5.2:34542982-34543001 | MS.gene55406:intron | 45.0% | |
| TGCACAATTTGAAGGAGGTG+TGG | - | chr5.2:34538480-34538499 | MS.gene55406:intron | 45.0% | |
| TTAGGTCAGAAGAGGGTAAG+AGG | - | chr5.2:34542276-34542295 | MS.gene55406:intron | 45.0% | |
| TTTAAATGCACTGGGCTGCT+TGG | - | chr5.2:34542401-34542420 | MS.gene55406:intron | 45.0% | |
| ! | AAAAAGTGTGCGCAACTTGG+AGG | - | chr5.2:34539772-34539791 | MS.gene55406:CDS | 45.0% |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr5.2:34543051-34543070 | MS.gene55406:intron | 45.0% |
| ! | AAGGCTTGGTTGTTGTTGAC+AGG | + | chr5.2:34543038-34543057 | None:intergenic | 45.0% |
| ! | ACATCATTGGTGTTCCAAGG+AGG | - | chr5.2:34542808-34542827 | MS.gene55406:intron | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr5.2:34543050-34543069 | MS.gene55406:intron | 45.0% |
| ! | CAATCTTTTGTACCTCCCCA+TGG | + | chr5.2:34540176-34540195 | None:intergenic | 45.0% |
| ! | CACAAGCTAGTTTCCACCAT+TGG | + | chr5.2:34539520-34539539 | None:intergenic | 45.0% |
| ! | CATCATTGGTGTTCCAAGGA+GGG | - | chr5.2:34542809-34542828 | MS.gene55406:intron | 45.0% |
| ! | GAAAAGTGTGCACAATCTGG+AGG | - | chr5.2:34540286-34540305 | MS.gene55406:CDS | 45.0% |
| ! | GCGACTTTTTGATCCAATGG+TGG | + | chr5.2:34539459-34539478 | None:intergenic | 45.0% |
| !! | AGATTAGGACTTGCTACCAC+TGG | + | chr5.2:34542072-34542091 | None:intergenic | 45.0% |
| !! | GAGTGTGACCAATTTGTTGG+AGG | - | chr5.2:34541122-34541141 | MS.gene55406:intron | 45.0% |
| !! | AAAGATAAAAAAAAAAATTA+TGG | + | chr5.2:34540933-34540952 | None:intergenic | 5.0% |
| !! | ATAAAAAATTGAAAATAAAA+AGG | + | chr5.2:34538556-34538575 | None:intergenic | 5.0% |
| !!! | ATTTTTTAATTTTTTACAAT+TGG | + | chr5.2:34540133-34540152 | None:intergenic | 5.0% |
| AAGTGTGCACAATCTGGAGG+AGG | - | chr5.2:34540289-34540308 | MS.gene55406:CDS | 50.0% | |
| ACCACCTCGTGAATGAACCT+TGG | + | chr5.2:34542989-34543008 | None:intergenic | 50.0% | |
| ATACCCGAATGTCGGATGTG+TGG | - | chr5.2:34542301-34542320 | MS.gene55406:intron | 50.0% | |
| CAAGAGTAAGAGGCCCTGAA+AGG | - | chr5.2:34543698-34543717 | MS.gene55406:intron | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr5.2:34543052-34543071 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr5.2:34543055-34543074 | MS.gene55406:intron | 50.0% | |
| GAGATGTACCTTTCCCTCCT+TGG | + | chr5.2:34542825-34542844 | None:intergenic | 50.0% | |
| GGTAATCCTATAGGGTGGGA+AGG | - | chr5.2:34542369-34542388 | MS.gene55406:intron | 50.0% | |
| GTAAGAGGCCCTGAAAGGAA+AGG | - | chr5.2:34543703-34543722 | MS.gene55406:intron | 50.0% | |
| GTAGAGTGTGCACATTGTGG+AGG | - | chr5.2:34539084-34539103 | MS.gene55406:intron | 50.0% | |
| GTAGGCAGCCATTTCTTCCT+CGG | + | chr5.2:34542744-34542763 | None:intergenic | 50.0% | |
| TCCAAGGTTCATTCACGAGG+TGG | - | chr5.2:34542985-34543004 | MS.gene55406:intron | 50.0% | |
| TGGGAACCAAGAGTCTTCCA+AGG | - | chr5.2:34542969-34542988 | MS.gene55406:intron | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr5.2:34543049-34543068 | MS.gene55406:intron | 50.0% |
| ! | CGGCCTTTTGTTCCTCTCAT+TGG | + | chr5.2:34541009-34541028 | None:intergenic | 50.0% |
| ! | TTGGTGTTCCAAGGAGGGAA+AGG | - | chr5.2:34542814-34542833 | MS.gene55406:intron | 50.0% |
| AAGTGTGCGCAACTTGGAGG+AGG | - | chr5.2:34539775-34539794 | MS.gene55406:CDS | 55.0% | |
| AGGGCAACTCTATGGTGCAC+AGG | + | chr5.2:34539564-34539583 | None:intergenic | 55.0% | |
| ATGCACTGGGCTGCTTGGTA+AGG | - | chr5.2:34542406-34542425 | MS.gene55406:intron | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr5.2:34543064-34543083 | None:intergenic | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr5.2:34543057-34543076 | None:intergenic | 55.0% | |
| GAGTGTGCACATTGTGGAGG+AGG | - | chr5.2:34539087-34539106 | MS.gene55406:intron | 55.0% | |
| GTGTGTGTTTGGTTGTGCGG+TGG | - | chr5.2:34541196-34541215 | MS.gene55406:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr5.2:34543063-34543082 | None:intergenic | 55.0% | |
| ! | ATACTCTGGAGAGGCGCACA+AGG | - | chr5.2:34538971-34538990 | MS.gene55406:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 34538358 | 34544062 | 34538358 | ID=MS.gene55406 |
| chr5.2 | mRNA | 34538358 | 34544062 | 34538358 | ID=MS.gene55406.t1;Parent=MS.gene55406 |
| chr5.2 | exon | 34543924 | 34544062 | 34543924 | ID=MS.gene55406.t1.exon1;Parent=MS.gene55406.t1 |
| chr5.2 | CDS | 34543924 | 34544062 | 34543924 | ID=cds.MS.gene55406.t1;Parent=MS.gene55406.t1 |
| chr5.2 | exon | 34543705 | 34543842 | 34543705 | ID=MS.gene55406.t1.exon2;Parent=MS.gene55406.t1 |
| chr5.2 | CDS | 34543705 | 34543842 | 34543705 | ID=cds.MS.gene55406.t1;Parent=MS.gene55406.t1 |
| chr5.2 | exon | 34543312 | 34543449 | 34543312 | ID=MS.gene55406.t1.exon3;Parent=MS.gene55406.t1 |
| chr5.2 | CDS | 34543312 | 34543449 | 34543312 | ID=cds.MS.gene55406.t1;Parent=MS.gene55406.t1 |
| chr5.2 | exon | 34543133 | 34543225 | 34543133 | ID=MS.gene55406.t1.exon4;Parent=MS.gene55406.t1 |
| chr5.2 | CDS | 34543133 | 34543225 | 34543133 | ID=cds.MS.gene55406.t1;Parent=MS.gene55406.t1 |
| chr5.2 | exon | 34542624 | 34542764 | 34542624 | ID=MS.gene55406.t1.exon5;Parent=MS.gene55406.t1 |
| chr5.2 | CDS | 34542624 | 34542764 | 34542624 | ID=cds.MS.gene55406.t1;Parent=MS.gene55406.t1 |
| chr5.2 | exon | 34542412 | 34542546 | 34542412 | ID=MS.gene55406.t1.exon6;Parent=MS.gene55406.t1 |
| chr5.2 | CDS | 34542412 | 34542546 | 34542412 | ID=cds.MS.gene55406.t1;Parent=MS.gene55406.t1 |
| chr5.2 | exon | 34542110 | 34542250 | 34542110 | ID=MS.gene55406.t1.exon7;Parent=MS.gene55406.t1 |
| chr5.2 | CDS | 34542110 | 34542250 | 34542110 | ID=cds.MS.gene55406.t1;Parent=MS.gene55406.t1 |
| chr5.2 | exon | 34541900 | 34542034 | 34541900 | ID=MS.gene55406.t1.exon8;Parent=MS.gene55406.t1 |
| chr5.2 | CDS | 34541900 | 34542034 | 34541900 | ID=cds.MS.gene55406.t1;Parent=MS.gene55406.t1 |
| chr5.2 | exon | 34541277 | 34541417 | 34541277 | ID=MS.gene55406.t1.exon9;Parent=MS.gene55406.t1 |
| chr5.2 | CDS | 34541277 | 34541417 | 34541277 | ID=cds.MS.gene55406.t1;Parent=MS.gene55406.t1 |
| chr5.2 | exon | 34540231 | 34540365 | 34540231 | ID=MS.gene55406.t1.exon10;Parent=MS.gene55406.t1 |
| chr5.2 | CDS | 34540231 | 34540365 | 34540231 | ID=cds.MS.gene55406.t1;Parent=MS.gene55406.t1 |
| chr5.2 | exon | 34539908 | 34540140 | 34539908 | ID=MS.gene55406.t1.exon11;Parent=MS.gene55406.t1 |
| chr5.2 | CDS | 34539908 | 34540140 | 34539908 | ID=cds.MS.gene55406.t1;Parent=MS.gene55406.t1 |
| chr5.2 | exon | 34539585 | 34539803 | 34539585 | ID=MS.gene55406.t1.exon12;Parent=MS.gene55406.t1 |
| chr5.2 | CDS | 34539585 | 34539803 | 34539585 | ID=cds.MS.gene55406.t1;Parent=MS.gene55406.t1 |
| chr5.2 | exon | 34539417 | 34539506 | 34539417 | ID=MS.gene55406.t1.exon13;Parent=MS.gene55406.t1 |
| chr5.2 | CDS | 34539417 | 34539506 | 34539417 | ID=cds.MS.gene55406.t1;Parent=MS.gene55406.t1 |
| chr5.2 | exon | 34538926 | 34539030 | 34538926 | ID=MS.gene55406.t1.exon14;Parent=MS.gene55406.t1 |
| chr5.2 | CDS | 34538926 | 34539030 | 34538926 | ID=cds.MS.gene55406.t1;Parent=MS.gene55406.t1 |
| chr5.2 | exon | 34538517 | 34538813 | 34538517 | ID=MS.gene55406.t1.exon15;Parent=MS.gene55406.t1 |
| chr5.2 | CDS | 34538517 | 34538813 | 34538517 | ID=cds.MS.gene55406.t1;Parent=MS.gene55406.t1 |
| chr5.2 | exon | 34538358 | 34538438 | 34538358 | ID=MS.gene55406.t1.exon16;Parent=MS.gene55406.t1 |
| chr5.2 | CDS | 34538358 | 34538438 | 34538358 | ID=cds.MS.gene55406.t1;Parent=MS.gene55406.t1 |
| Gene Sequence |
| Protein sequence |
