Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56717.t1 | XP_003588458.1 | 93.7 | 520 | 28 | 1 | 1 | 515 | 22 | 541 | 3.30E-269 | 937.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56717.t1 | G7I291 | 93.7 | 520 | 28 | 1 | 1 | 515 | 22 | 541 | 2.4e-269 | 937.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene56717 | 0.864749 | 9.72E-65 | -1.69E-46 |
| MS.gene049159 | MS.gene56717 | 0.841988 | 3.40E-58 | -1.69E-46 |
| MS.gene049341 | MS.gene56717 | 0.84416 | 8.98E-59 | -1.69E-46 |
| MS.gene049350 | MS.gene56717 | 0.805915 | 1.06E-49 | -1.69E-46 |
| MS.gene049382 | MS.gene56717 | 0.803916 | 2.77E-49 | -1.69E-46 |
| MS.gene049404 | MS.gene56717 | 0.805633 | 1.22E-49 | -1.69E-46 |
| MS.gene049435 | MS.gene56717 | 0.815715 | 8.02E-52 | -1.69E-46 |
| MS.gene049501 | MS.gene56717 | 0.826409 | 2.76E-54 | -1.69E-46 |
| MS.gene049770 | MS.gene56717 | 0.8132 | 2.89E-51 | -1.69E-46 |
| MS.gene049821 | MS.gene56717 | 0.834061 | 3.73E-56 | -1.69E-46 |
| MS.gene049850 | MS.gene56717 | 0.848218 | 7.05E-60 | -1.69E-46 |
| MS.gene049887 | MS.gene56717 | 0.809472 | 1.86E-50 | -1.69E-46 |
| MS.gene050020 | MS.gene56717 | 0.847031 | 1.50E-59 | -1.69E-46 |
| MS.gene050442 | MS.gene56717 | 0.800017 | 1.76E-48 | -1.69E-46 |
| MS.gene05045 | MS.gene56717 | 0.807514 | 4.87E-50 | -1.69E-46 |
| MS.gene050551 | MS.gene56717 | 0.805849 | 1.09E-49 | -1.69E-46 |
| MS.gene050586 | MS.gene56717 | 0.805004 | 1.65E-49 | -1.69E-46 |
| MS.gene050689 | MS.gene56717 | 0.829975 | 3.81E-55 | -1.69E-46 |
| MS.gene050807 | MS.gene56717 | 0.855147 | 7.67E-62 | -1.69E-46 |
| MS.gene050808 | MS.gene56717 | 0.822561 | 2.22E-53 | -1.69E-46 |
| MS.gene050815 | MS.gene56717 | 0.820357 | 7.16E-53 | -1.69E-46 |
| MS.gene050901 | MS.gene56717 | 0.813105 | 3.03E-51 | -1.69E-46 |
| MS.gene050959 | MS.gene56717 | 0.807115 | 5.92E-50 | -1.69E-46 |
| MS.gene051102 | MS.gene56717 | 0.841656 | 4.16E-58 | -1.69E-46 |
| MS.gene051180 | MS.gene56717 | 0.808629 | 2.82E-50 | -1.69E-46 |
| MS.gene051198 | MS.gene56717 | 0.821989 | 3.01E-53 | -1.69E-46 |
| MS.gene051247 | MS.gene56717 | 0.854589 | 1.11E-61 | -1.69E-46 |
| MS.gene051279 | MS.gene56717 | 0.800291 | 1.54E-48 | -1.69E-46 |
| MS.gene051328 | MS.gene56717 | 0.845066 | 5.12E-59 | -1.69E-46 |
| MS.gene051388 | MS.gene56717 | 0.816633 | 5.00E-52 | -1.69E-46 |
| MS.gene05157 | MS.gene56717 | 0.866998 | 1.89E-65 | -1.69E-46 |
| MS.gene051700 | MS.gene56717 | 0.818582 | 1.82E-52 | -1.69E-46 |
| MS.gene051719 | MS.gene56717 | 0.835337 | 1.78E-56 | -1.69E-46 |
| MS.gene051720 | MS.gene56717 | 0.851893 | 6.60E-61 | -1.69E-46 |
| MS.gene051744 | MS.gene56717 | 0.841482 | 4.63E-58 | -1.69E-46 |
| MS.gene052012 | MS.gene56717 | 0.814127 | 1.80E-51 | -1.69E-46 |
| MS.gene052020 | MS.gene56717 | 0.837768 | 4.28E-57 | -1.69E-46 |
| MS.gene052133 | MS.gene56717 | 0.856271 | 3.60E-62 | -1.69E-46 |
| MS.gene05215 | MS.gene56717 | 0.801271 | 9.74E-49 | -1.69E-46 |
| MS.gene052307 | MS.gene56717 | 0.804831 | 1.79E-49 | -1.69E-46 |
| MS.gene052323 | MS.gene56717 | 0.829421 | 5.20E-55 | -1.69E-46 |
| MS.gene052397 | MS.gene56717 | 0.842602 | 2.34E-58 | -1.69E-46 |
| MS.gene052516 | MS.gene56717 | 0.851703 | 7.47E-61 | -1.69E-46 |
| MS.gene052582 | MS.gene56717 | 0.800974 | 1.12E-48 | -1.69E-46 |
| MS.gene052584 | MS.gene56717 | 0.804604 | 2.00E-49 | -1.69E-46 |
| MS.gene052609 | MS.gene56717 | 0.818064 | 2.38E-52 | -1.69E-46 |
| MS.gene052611 | MS.gene56717 | 0.8352 | 1.93E-56 | -1.69E-46 |
| MS.gene052665 | MS.gene56717 | 0.871982 | 4.51E-67 | -1.69E-46 |
| MS.gene052732 | MS.gene56717 | 0.842916 | 1.93E-58 | -1.69E-46 |
| MS.gene052773 | MS.gene56717 | 0.812143 | 4.92E-51 | -1.69E-46 |
| MS.gene052858 | MS.gene56717 | 0.803432 | 3.50E-49 | -1.69E-46 |
| MS.gene052860 | MS.gene56717 | 0.814982 | 1.17E-51 | -1.69E-46 |
| MS.gene052863 | MS.gene56717 | 0.81587 | 7.41E-52 | -1.69E-46 |
| MS.gene052896 | MS.gene56717 | 0.83389 | 4.11E-56 | -1.69E-46 |
| MS.gene053008 | MS.gene56717 | 0.826375 | 2.81E-54 | -1.69E-46 |
| MS.gene053079 | MS.gene56717 | 0.841399 | 4.87E-58 | -1.69E-46 |
| MS.gene053122 | MS.gene56717 | 0.810198 | 1.30E-50 | -1.69E-46 |
| MS.gene053144 | MS.gene56717 | 0.819135 | 1.36E-52 | -1.69E-46 |
| MS.gene05315 | MS.gene56717 | 0.802269 | 6.08E-49 | -1.69E-46 |
| MS.gene053174 | MS.gene56717 | 0.817596 | 3.04E-52 | -1.69E-46 |
| MS.gene053221 | MS.gene56717 | 0.805164 | 1.52E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene56717 | 0.863277 | 2.79E-64 | -1.69E-46 |
| MS.gene053563 | MS.gene56717 | 0.810687 | 1.02E-50 | -1.69E-46 |
| MS.gene053565 | MS.gene56717 | 0.807764 | 4.31E-50 | -1.69E-46 |
| MS.gene053581 | MS.gene56717 | 0.824173 | 9.32E-54 | -1.69E-46 |
| MS.gene05364 | MS.gene56717 | 0.845872 | 3.10E-59 | -1.69E-46 |
| MS.gene054139 | MS.gene56717 | 0.811877 | 5.62E-51 | -1.69E-46 |
| MS.gene054472 | MS.gene56717 | 0.809252 | 2.07E-50 | -1.69E-46 |
| MS.gene054550 | MS.gene56717 | 0.810845 | 9.41E-51 | -1.69E-46 |
| MS.gene054584 | MS.gene56717 | 0.828338 | 9.50E-55 | -1.69E-46 |
| MS.gene05462 | MS.gene56717 | 0.828681 | 7.85E-55 | -1.69E-46 |
| MS.gene054651 | MS.gene56717 | 0.814435 | 1.54E-51 | -1.69E-46 |
| MS.gene054657 | MS.gene56717 | 0.803621 | 3.19E-49 | -1.69E-46 |
| MS.gene054775 | MS.gene56717 | 0.805169 | 1.52E-49 | -1.69E-46 |
| MS.gene055465 | MS.gene56717 | 0.8862 | 4.21E-72 | -1.69E-46 |
| MS.gene055466 | MS.gene56717 | 0.870959 | 9.83E-67 | -1.69E-46 |
| MS.gene055467 | MS.gene56717 | 0.812808 | 3.52E-51 | -1.69E-46 |
| MS.gene055468 | MS.gene56717 | 0.869518 | 2.92E-66 | -1.69E-46 |
| MS.gene055469 | MS.gene56717 | 0.870907 | 1.02E-66 | -1.69E-46 |
| MS.gene055512 | MS.gene56717 | 0.82448 | 7.89E-54 | -1.69E-46 |
| MS.gene055513 | MS.gene56717 | 0.820694 | 5.99E-53 | -1.69E-46 |
| MS.gene055537 | MS.gene56717 | 0.81853 | 1.87E-52 | -1.69E-46 |
| MS.gene055580 | MS.gene56717 | -0.842063 | 3.25E-58 | -1.69E-46 |
| MS.gene055608 | MS.gene56717 | 0.81089 | 9.21E-51 | -1.69E-46 |
| MS.gene055778 | MS.gene56717 | 0.813222 | 2.85E-51 | -1.69E-46 |
| MS.gene055818 | MS.gene56717 | 0.80609 | 9.74E-50 | -1.69E-46 |
| MS.gene055890 | MS.gene56717 | 0.832497 | 9.14E-56 | -1.69E-46 |
| MS.gene055891 | MS.gene56717 | 0.835178 | 1.95E-56 | -1.69E-46 |
| MS.gene055926 | MS.gene56717 | 0.805036 | 1.62E-49 | -1.69E-46 |
| MS.gene056005 | MS.gene56717 | 0.809245 | 2.08E-50 | -1.69E-46 |
| MS.gene056043 | MS.gene56717 | -0.836074 | 1.16E-56 | -1.69E-46 |
| MS.gene05604 | MS.gene56717 | 0.810133 | 1.34E-50 | -1.69E-46 |
| MS.gene056173 | MS.gene56717 | 0.801942 | 7.09E-49 | -1.69E-46 |
| MS.gene056174 | MS.gene56717 | 0.806401 | 8.38E-50 | -1.69E-46 |
| MS.gene056181 | MS.gene56717 | 0.803147 | 4.00E-49 | -1.69E-46 |
| MS.gene056215 | MS.gene56717 | 0.819497 | 1.13E-52 | -1.69E-46 |
| MS.gene056308 | MS.gene56717 | 0.857623 | 1.44E-62 | -1.69E-46 |
| MS.gene056507 | MS.gene56717 | 0.847391 | 1.19E-59 | -1.69E-46 |
| MS.gene056553 | MS.gene56717 | 0.85136 | 9.34E-61 | -1.69E-46 |
| MS.gene056643 | MS.gene56717 | 0.824646 | 7.21E-54 | -1.69E-46 |
| MS.gene056760 | MS.gene56717 | 0.811582 | 6.51E-51 | -1.69E-46 |
| MS.gene057034 | MS.gene56717 | 0.805155 | 1.53E-49 | -1.69E-46 |
| MS.gene057314 | MS.gene56717 | 0.806726 | 7.15E-50 | -1.69E-46 |
| MS.gene057360 | MS.gene56717 | 0.802154 | 6.42E-49 | -1.69E-46 |
| MS.gene057444 | MS.gene56717 | 0.823894 | 1.08E-53 | -1.69E-46 |
| MS.gene057446 | MS.gene56717 | 0.828725 | 7.66E-55 | -1.69E-46 |
| MS.gene057693 | MS.gene56717 | 0.808154 | 3.56E-50 | -1.69E-46 |
| MS.gene057869 | MS.gene56717 | 0.855228 | 7.26E-62 | -1.69E-46 |
| MS.gene057915 | MS.gene56717 | 0.856893 | 2.36E-62 | -1.69E-46 |
| MS.gene058010 | MS.gene56717 | 0.826282 | 2.95E-54 | -1.69E-46 |
| MS.gene058084 | MS.gene56717 | 0.809475 | 1.86E-50 | -1.69E-46 |
| MS.gene058087 | MS.gene56717 | 0.83034 | 3.10E-55 | -1.69E-46 |
| MS.gene058168 | MS.gene56717 | 0.815676 | 8.18E-52 | -1.69E-46 |
| MS.gene058292 | MS.gene56717 | 0.803497 | 3.39E-49 | -1.69E-46 |
| MS.gene058339 | MS.gene56717 | 0.813813 | 2.12E-51 | -1.69E-46 |
| MS.gene05847 | MS.gene56717 | 0.813496 | 2.49E-51 | -1.69E-46 |
| MS.gene058625 | MS.gene56717 | 0.801305 | 9.59E-49 | -1.69E-46 |
| MS.gene058636 | MS.gene56717 | 0.800143 | 1.65E-48 | -1.69E-46 |
| MS.gene058646 | MS.gene56717 | 0.802805 | 4.71E-49 | -1.69E-46 |
| MS.gene058668 | MS.gene56717 | 0.810768 | 9.78E-51 | -1.69E-46 |
| MS.gene058829 | MS.gene56717 | 0.803123 | 4.05E-49 | -1.69E-46 |
| MS.gene058852 | MS.gene56717 | 0.843192 | 1.63E-58 | -1.69E-46 |
| MS.gene059331 | MS.gene56717 | 0.808539 | 2.95E-50 | -1.69E-46 |
| MS.gene059335 | MS.gene56717 | 0.804386 | 2.21E-49 | -1.69E-46 |
| MS.gene059570 | MS.gene56717 | 0.836208 | 1.07E-56 | -1.69E-46 |
| MS.gene059713 | MS.gene56717 | 0.802644 | 5.09E-49 | -1.69E-46 |
| MS.gene059725 | MS.gene56717 | 0.853748 | 1.95E-61 | -1.69E-46 |
| MS.gene05978 | MS.gene56717 | 0.847192 | 1.35E-59 | -1.69E-46 |
| MS.gene059842 | MS.gene56717 | 0.824562 | 7.55E-54 | -1.69E-46 |
| MS.gene059937 | MS.gene56717 | 0.874174 | 8.30E-68 | -1.69E-46 |
| MS.gene060127 | MS.gene56717 | 0.818622 | 1.78E-52 | -1.69E-46 |
| MS.gene060296 | MS.gene56717 | 0.804374 | 2.23E-49 | -1.69E-46 |
| MS.gene060429 | MS.gene56717 | 0.834642 | 2.66E-56 | -1.69E-46 |
| MS.gene060470 | MS.gene56717 | 0.802028 | 6.81E-49 | -1.69E-46 |
| MS.gene06052 | MS.gene56717 | 0.804881 | 1.75E-49 | -1.69E-46 |
| MS.gene060587 | MS.gene56717 | 0.842243 | 2.91E-58 | -1.69E-46 |
| MS.gene060637 | MS.gene56717 | 0.836674 | 8.15E-57 | -1.69E-46 |
| MS.gene060803 | MS.gene56717 | 0.809002 | 2.35E-50 | -1.69E-46 |
| MS.gene061006 | MS.gene56717 | 0.843367 | 1.46E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56717.t1 | MTR_1g007460 | 93.654 | 520 | 28 | 1 | 1 | 515 | 22 | 541 | 0.0 | 942 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56717.t1 | AT5G05240 | 40.517 | 348 | 163 | 10 | 167 | 497 | 85 | 405 | 1.25e-68 | 228 |
| MS.gene56717.t1 | AT5G05240 | 40.517 | 348 | 163 | 10 | 167 | 497 | 144 | 464 | 4.59e-68 | 228 |
| MS.gene56717.t1 | AT2G40630 | 30.294 | 340 | 160 | 14 | 178 | 502 | 203 | 480 | 5.64e-22 | 99.4 |
| MS.gene56717.t1 | AT2G40630 | 30.294 | 340 | 160 | 14 | 178 | 502 | 203 | 480 | 8.51e-22 | 99.4 |
| MS.gene56717.t1 | AT2G40630 | 42.188 | 128 | 59 | 4 | 178 | 290 | 203 | 330 | 2.79e-20 | 93.2 |
Find 107 sgRNAs with CRISPR-Local
Find 172 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTTGATGCACAATCTTTA+AGG | 0.109076 | 1.3:-12028503 | None:intergenic |
| GAACGAGTCCTCATGGATTT+TGG | 0.192385 | 1.3:+12028434 | MS.gene56717:CDS |
| TTCCTTATGTCGAAGGAATT+TGG | 0.203422 | 1.3:+12029174 | MS.gene56717:CDS |
| GTTTCATCTCTTTCTCTAAA+AGG | 0.205093 | 1.3:+12028636 | MS.gene56717:CDS |
| ATCGGGTAGTCCCAGGGTTT+TGG | 0.259058 | 1.3:+12027693 | MS.gene56717:CDS |
| TCGCATCTTTCACATGTTCT+AGG | 0.282682 | 1.3:-12028356 | None:intergenic |
| CTCATTGGATCTCTCTCCTT+TGG | 0.293606 | 1.3:-12027994 | None:intergenic |
| TGATTCTTCATTCGACATAT+TGG | 0.315817 | 1.3:-12028598 | None:intergenic |
| ATTTCAACTTCAACTGTTCA+TGG | 0.325280 | 1.3:+12028048 | MS.gene56717:CDS |
| GACATCAAAGGGCGTCTTGC+GGG | 0.344234 | 1.3:+12029004 | MS.gene56717:CDS |
| CAAGAGATTCAATAATTGTT+TGG | 0.346689 | 1.3:-12028248 | None:intergenic |
| AACATTGTTCAATCGTCATT+TGG | 0.348124 | 1.3:+12027586 | MS.gene56717:CDS |
| TACCACAAGGATCATAATTC+TGG | 0.358167 | 1.3:-12029203 | None:intergenic |
| TATGGTACAGAAAAGGCAAT+TGG | 0.362075 | 1.3:+12027556 | MS.gene56717:intron |
| CCGGATAAAAGCAGTGGATT+TGG | 0.363540 | 1.3:+12027760 | MS.gene56717:CDS |
| CGGATACAATGAAGGATATC+TGG | 0.365233 | 1.3:-12027740 | None:intergenic |
| GACTGCGTTGTTTGATCATA+TGG | 0.368849 | 1.3:+12029284 | MS.gene56717:CDS |
| AGAGAGATCCAATGAGAATA+TGG | 0.378755 | 1.3:+12028001 | MS.gene56717:CDS |
| CTCCAAATTCCTTCGACATA+AGG | 0.391145 | 1.3:-12029176 | None:intergenic |
| CTCCCGCGTTTCTTCGGCAC+CGG | 0.412535 | 1.3:-12028078 | None:intergenic |
| CTGCTACTGTTGCTTCTCAA+TGG | 0.416406 | 1.3:+12028963 | MS.gene56717:CDS |
| CAAGATGGAAGGAGCACATC+GGG | 0.417047 | 1.3:+12027676 | MS.gene56717:CDS |
| ATCTCCGTCCATATTCTCAT+TGG | 0.418166 | 1.3:-12028009 | None:intergenic |
| ATTGGATCTCTCTCCTTTGG+AGG | 0.421393 | 1.3:-12027991 | None:intergenic |
| CATGGCATAGATTGACCTAA+AGG | 0.432673 | 1.3:-12029393 | None:intergenic |
| CAGATATCCTTCATTGTATC+CGG | 0.438823 | 1.3:+12027741 | MS.gene56717:CDS |
| CAAAGAGAGAACAAATCAAC+AGG | 0.439385 | 1.3:+12028142 | MS.gene56717:CDS |
| AACTGTTCATGGTGGCATTC+CGG | 0.439849 | 1.3:+12028059 | MS.gene56717:CDS |
| GGAATTGTTGTCGGAAAAGC+AGG | 0.454962 | 1.3:+12027804 | MS.gene56717:CDS |
| TACTGTTGCTTCTCAATGGT+TGG | 0.455636 | 1.3:+12028967 | MS.gene56717:CDS |
| TTACTAGTGGGAAGTCCCTC+AGG | 0.457820 | 1.3:-12029234 | None:intergenic |
| GATCTTAACACTGAAGTTTG+TGG | 0.464864 | 1.3:+12027715 | MS.gene56717:CDS |
| TGTTCTTTGTGAAAACTTGT+TGG | 0.467575 | 1.3:-12027919 | None:intergenic |
| CTTACATGATTAATAATCCC+AGG | 0.474734 | 1.3:-12028210 | None:intergenic |
| ATGGTACAGAAAAGGCAATT+GGG | 0.483116 | 1.3:+12027557 | MS.gene56717:intron |
| TCATGTAAGAAATAGAAAAC+AGG | 0.494158 | 1.3:+12028224 | MS.gene56717:CDS |
| CTTTAGGTCAATCTATGCCA+TGG | 0.497065 | 1.3:+12029394 | MS.gene56717:CDS |
| TTAGGTGATGAGTGAGAAGA+GGG | 0.497120 | 1.3:+12026911 | None:intergenic |
| TTCTACATCAAGACATCAAA+GGG | 0.503298 | 1.3:+12028993 | MS.gene56717:CDS |
| CATCGAATGAGTGGAAGTAT+AGG | 0.503503 | 1.3:+12028318 | MS.gene56717:CDS |
| CTTGAATCTGTGGTTGCTGC+AGG | 0.503538 | 1.3:+12026993 | MS.gene56717:CDS |
| GGAGCACATCGGGTAGTCCC+AGG | 0.505732 | 1.3:+12027686 | MS.gene56717:CDS |
| TTCTTCATTCGACATATTGG+TGG | 0.507223 | 1.3:-12028595 | None:intergenic |
| CTACTGAATGATTTAAACCC+TGG | 0.508197 | 1.3:+12028192 | MS.gene56717:CDS |
| TAAAATAGCAGAGTTGCATC+AGG | 0.508788 | 1.3:+12029254 | MS.gene56717:CDS |
| CAGCTTTGCGTCGCAGTAGG+AGG | 0.512130 | 1.3:+12029118 | MS.gene56717:intron |
| AAAATAGGAGCATAGGAAGT+AGG | 0.512534 | 1.3:+12028286 | MS.gene56717:CDS |
| TGGACGGAGATGAAGCGAAA+TGG | 0.520042 | 1.3:+12028021 | MS.gene56717:CDS |
| TACTGAATGATTTAAACCCT+GGG | 0.522493 | 1.3:+12028193 | MS.gene56717:CDS |
| CAGAGTTGCATCAGGCAAGA+TGG | 0.523605 | 1.3:+12029262 | MS.gene56717:CDS |
| GGTGCCTTTGTCAGTGGACG+TGG | 0.524014 | 1.3:+12027636 | MS.gene56717:CDS |
| GAAATTGTCATCTTCAATGA+AGG | 0.527882 | 1.3:+12028560 | MS.gene56717:CDS |
| AAATCATTCAGTAGTCCACT+TGG | 0.530652 | 1.3:-12028183 | None:intergenic |
| TGACAAAGAACGAGTCCTCA+TGG | 0.531969 | 1.3:+12028427 | MS.gene56717:CDS |
| TAAGGAGAAGGAATTGTTGT+CGG | 0.533565 | 1.3:+12027795 | MS.gene56717:CDS |
| TGATACTAGATCCGTGAATG+TGG | 0.555113 | 1.3:+12027894 | MS.gene56717:CDS |
| ACTTGTTGGTCCCACATTCA+CGG | 0.556729 | 1.3:-12027905 | None:intergenic |
| GTTGCCTTTCCTTATGTCGA+AGG | 0.558470 | 1.3:+12029167 | MS.gene56717:CDS |
| AAACACGAAAATAGGAGCAT+AGG | 0.561239 | 1.3:+12028279 | MS.gene56717:CDS |
| TTACAGCTTTGCGTCGCAGT+AGG | 0.568245 | 1.3:+12029115 | MS.gene56717:intron |
| CACCAAGGTGCCTTTGTCAG+TGG | 0.574240 | 1.3:+12027630 | MS.gene56717:CDS |
| CTTCTACATCAAGACATCAA+AGG | 0.576241 | 1.3:+12028992 | MS.gene56717:CDS |
| TTACATGATTAATAATCCCA+GGG | 0.576690 | 1.3:-12028209 | None:intergenic |
| CAAAAGAAGAGCAAGATGGA+AGG | 0.579626 | 1.3:+12027665 | MS.gene56717:CDS |
| AGACATCAAAGGGCGTCTTG+CGG | 0.583767 | 1.3:+12029003 | MS.gene56717:CDS |
| GGATGAAGCACTTATTGAAG+AGG | 0.586487 | 1.3:+12029305 | MS.gene56717:CDS |
| TGATGCTGAAACTATTTCCA+TGG | 0.587090 | 1.3:-12029411 | None:intergenic |
| TGAGAAACTCAGTAAGGAGA+AGG | 0.588059 | 1.3:+12027783 | MS.gene56717:CDS |
| TTTAGGTGATGAGTGAGAAG+AGG | 0.588914 | 1.3:+12026910 | None:intergenic |
| TTCATGCTTATCTCCCAAGT+GGG | 0.592567 | 1.3:-12026940 | None:intergenic |
| TTGTATCCGGATAAAAGCAG+TGG | 0.593470 | 1.3:+12027754 | MS.gene56717:CDS |
| TTCCGGTGCCGAAGAAACGC+GGG | 0.596896 | 1.3:+12028076 | MS.gene56717:CDS |
| GAAGAGGGTTAATACCCACT+TGG | 0.597622 | 1.3:+12026926 | MS.gene56717:CDS |
| GTTTCAAAAGAAGAGCAAGA+TGG | 0.600220 | 1.3:+12027661 | MS.gene56717:CDS |
| GTGTTAAGATCCAAAACCCT+GGG | 0.601860 | 1.3:-12027703 | None:intergenic |
| CAGGAAAGAGAACAACTTGG+TGG | 0.607354 | 1.3:+12027823 | MS.gene56717:CDS |
| GAAGTATAGGCGTTAACAAG+AGG | 0.608696 | 1.3:+12028331 | MS.gene56717:CDS |
| AATGAAAGATCTTGAATCTG+TGG | 0.610845 | 1.3:+12026983 | MS.gene56717:CDS |
| ATTCCGGTGCCGAAGAAACG+CGG | 0.611585 | 1.3:+12028075 | MS.gene56717:CDS |
| GTCCACTGACAAAGGCACCT+TGG | 0.612422 | 1.3:-12027632 | None:intergenic |
| AAGAGGGTTAATACCCACTT+GGG | 0.613767 | 1.3:+12026927 | MS.gene56717:CDS |
| ACATCCACGTCCACTGACAA+AGG | 0.613781 | 1.3:-12027640 | None:intergenic |
| CAAGCAGCACATCGAATGAG+TGG | 0.614102 | 1.3:+12028309 | MS.gene56717:CDS |
| ATTTGGTGAGAAACTCAGTA+AGG | 0.617815 | 1.3:+12027777 | MS.gene56717:CDS |
| GAAAGAGAACAACTTGGTGG+TGG | 0.618516 | 1.3:+12027826 | MS.gene56717:CDS |
| TTGTGGTATGAAATTTCCTG+AGG | 0.620717 | 1.3:+12029218 | MS.gene56717:CDS |
| ACAAAGATTGCAGCTCCAAG+TGG | 0.624079 | 1.3:+12028168 | MS.gene56717:CDS |
| GAGCAGTGCTGAACCTCCAA+AGG | 0.625656 | 1.3:+12027978 | MS.gene56717:CDS |
| AAGTATAGGCGTTAACAAGA+GGG | 0.629743 | 1.3:+12028332 | MS.gene56717:CDS |
| AGTGTTAAGATCCAAAACCC+TGG | 0.632315 | 1.3:-12027704 | None:intergenic |
| AATTCCTTCGACATAAGGAA+AGG | 0.634583 | 1.3:-12029171 | None:intergenic |
| TGTGGTATGAAATTTCCTGA+GGG | 0.635397 | 1.3:+12029219 | MS.gene56717:CDS |
| GAGCACATCGGGTAGTCCCA+GGG | 0.635736 | 1.3:+12027687 | MS.gene56717:CDS |
| GATACTAGATCCGTGAATGT+GGG | 0.637534 | 1.3:+12027895 | MS.gene56717:CDS |
| AGATCCAATGAGAATATGGA+CGG | 0.638354 | 1.3:+12028005 | MS.gene56717:CDS |
| GCAAGATGGAAGGAGCACAT+CGG | 0.648843 | 1.3:+12027675 | MS.gene56717:CDS |
| AGAATCATCAAATGTTACAA+CGG | 0.650924 | 1.3:+12028614 | MS.gene56717:CDS |
| GACCAGAATTATGATCCTTG+TGG | 0.652264 | 1.3:+12029201 | MS.gene56717:CDS |
| TCAACTTCAACTGTTCATGG+TGG | 0.666173 | 1.3:+12028051 | MS.gene56717:CDS |
| AAGCAGGAAAGAGAACAACT+TGG | 0.671542 | 1.3:+12027820 | MS.gene56717:CDS |
| GTTCATGCTTATCTCCCAAG+TGG | 0.674448 | 1.3:-12026941 | None:intergenic |
| TCAGGAAATTTCATACCACA+AGG | 0.683637 | 1.3:-12029216 | None:intergenic |
| CGGTGCCGAAGAAACGCGGG+AGG | 0.695908 | 1.3:+12028079 | MS.gene56717:CDS |
| GAACACGAGAGGAATTAATG+TGG | 0.701018 | 1.3:+12027855 | MS.gene56717:CDS |
| TGAGATGTCACAAATCACCA+AGG | 0.717810 | 1.3:+12027615 | MS.gene56717:CDS |
| GGTGGTGATGTGAACACGAG+AGG | 0.718627 | 1.3:+12027844 | MS.gene56717:CDS |
| TTTACCCTCCAAAATCCATG+AGG | 0.742859 | 1.3:-12028442 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATCAAATATATATAAGA+AGG | + | chr1.3:12028862-12028881 | MS.gene56717:intron | 10.0% |
| !! | AAATCAAATATATATAAGAA+GGG | + | chr1.3:12028863-12028882 | MS.gene56717:intron | 10.0% |
| !!! | AACTTTAAAAGAAATAAATA+TGG | - | chr1.3:12029035-12029054 | None:intergenic | 10.0% |
| !!! | TTTCTTTTAAAGTTTTTAAA+CGG | + | chr1.3:12029041-12029060 | MS.gene56717:intron | 10.0% |
| !! | AATAATGCATAATAAAAACA+AGG | + | chr1.3:12028712-12028731 | MS.gene56717:intron | 15.0% |
| !! | ACTTTATGAATATTCATAAA+AGG | - | chr1.3:12027406-12027425 | None:intergenic | 15.0% |
| !! | ATAATGCATAATAAAAACAA+GGG | + | chr1.3:12028713-12028732 | MS.gene56717:intron | 15.0% |
| !! | TGTAAATGATATTTCATATT+TGG | + | chr1.3:12027138-12027157 | MS.gene56717:intron | 15.0% |
| !!! | TTCTTTTAAAGTTTTTAAAC+GGG | + | chr1.3:12029042-12029061 | MS.gene56717:intron | 15.0% |
| !! | AATAAAATTTGATAGAGTCA+AGG | + | chr1.3:12027379-12027398 | MS.gene56717:intron | 20.0% |
| !! | ATAGTAAGTTGTTGAATATT+AGG | - | chr1.3:12027295-12027314 | None:intergenic | 20.0% |
| !! | TAATGCATAATAAAAACAAG+GGG | + | chr1.3:12028714-12028733 | MS.gene56717:intron | 20.0% |
| !! | TATGAATATTCATAAAGTCA+GGG | + | chr1.3:12027408-12027427 | MS.gene56717:intron | 20.0% |
| !! | TTATGAATATTCATAAAGTC+AGG | + | chr1.3:12027407-12027426 | MS.gene56717:intron | 20.0% |
| ! | AAACATAAGCAAAAGGAAAA+TGG | - | chr1.3:12028669-12028688 | None:intergenic | 25.0% |
| ! | AGAATCATCAAATGTTACAA+CGG | + | chr1.3:12028614-12028633 | MS.gene56717:CDS | 25.0% |
| ! | AGATTATGAGTATTTCAGAA+AGG | + | chr1.3:12027239-12027258 | MS.gene56717:intron | 25.0% |
| ! | AGGTAATTTCATTATTGGAT+TGG | + | chr1.3:12027013-12027032 | MS.gene56717:intron | 25.0% |
| ! | ATAATGAAAATGCTTACATG+TGG | + | chr1.3:12029071-12029090 | MS.gene56717:intron | 25.0% |
| ! | CAAGAGATTCAATAATTGTT+TGG | - | chr1.3:12028251-12028270 | None:intergenic | 25.0% |
| ! | GGAAAATTAATCTTCACATT+AGG | + | chr1.3:12028774-12028793 | MS.gene56717:intron | 25.0% |
| ! | GGTAATTTCATTATTGGATT+GGG | + | chr1.3:12027014-12027033 | MS.gene56717:intron | 25.0% |
| ! | GGTTTAAATTTACATGCATA+TGG | + | chr1.3:12027035-12027054 | MS.gene56717:intron | 25.0% |
| ! | TAACTGAAAAACACGAAAAT+AGG | + | chr1.3:12028271-12028290 | MS.gene56717:CDS | 25.0% |
| ! | TACAAAGTTAGAGACTAATT+TGG | + | chr1.3:12027449-12027468 | MS.gene56717:intron | 25.0% |
| ! | TAGTATAGATGTCATCTAAA+GGG | + | chr1.3:12028798-12028817 | MS.gene56717:intron | 25.0% |
| ! | TCATGTAAGAAATAGAAAAC+AGG | + | chr1.3:12028224-12028243 | MS.gene56717:CDS | 25.0% |
| ! | TGAAATTCTTGAGCAAAAAA+TGG | + | chr1.3:12028113-12028132 | MS.gene56717:CDS | 25.0% |
| ! | TGAGTAAGTAGATAAACTTA+AGG | - | chr1.3:12027322-12027341 | None:intergenic | 25.0% |
| ! | TTACATGATTAATAATCCCA+GGG | - | chr1.3:12028212-12028231 | None:intergenic | 25.0% |
| ! | TTGTATTTATGGTACAGAAA+AGG | + | chr1.3:12027549-12027568 | MS.gene56717:intron | 25.0% |
| ! | TTTGTTGAACATCCTTAAAT+AGG | + | chr1.3:12027210-12027229 | MS.gene56717:intron | 25.0% |
| !! | AAAACACAACTATTTTGTCA+TGG | + | chr1.3:12029348-12029367 | MS.gene56717:CDS | 25.0% |
| !! | ATGATACGCTTTTGTATTTA+TGG | + | chr1.3:12027538-12027557 | MS.gene56717:intron | 25.0% |
| !! | CTATATTGTTGTATGCATTT+TGG | + | chr1.3:12027481-12027500 | MS.gene56717:intron | 25.0% |
| AAAGTTAGAGACTAATTTGG+TGG | + | chr1.3:12027452-12027471 | MS.gene56717:intron | 30.0% | |
| AACATTGTTCAATCGTCATT+TGG | + | chr1.3:12027586-12027605 | MS.gene56717:CDS | 30.0% | |
| AATGAAAGATCTTGAATCTG+TGG | + | chr1.3:12026983-12027002 | MS.gene56717:CDS | 30.0% | |
| ACTCTCTTAAACTGACAAAT+TGG | + | chr1.3:12027268-12027287 | MS.gene56717:intron | 30.0% | |
| AGACAAGAAACATAAGCAAA+AGG | - | chr1.3:12028676-12028695 | None:intergenic | 30.0% | |
| ATTTCAACTTCAACTGTTCA+TGG | + | chr1.3:12028048-12028067 | MS.gene56717:CDS | 30.0% | |
| CATTTGATGCACAATCTTTA+AGG | - | chr1.3:12028506-12028525 | None:intergenic | 30.0% | |
| CTAGTATAGATGTCATCTAA+AGG | + | chr1.3:12028797-12028816 | MS.gene56717:intron | 30.0% | |
| CTGAAATACTCATAATCTCA+AGG | - | chr1.3:12027237-12027256 | None:intergenic | 30.0% | |
| CTTACATGATTAATAATCCC+AGG | - | chr1.3:12028213-12028232 | None:intergenic | 30.0% | |
| GAAATTGTCATCTTCAATGA+AGG | + | chr1.3:12028560-12028579 | MS.gene56717:CDS | 30.0% | |
| GCTTGTTCATGATAAAAAGT+AGG | - | chr1.3:12028393-12028412 | None:intergenic | 30.0% | |
| GTACCATAAAAAGTTGTCTA+GGG | + | chr1.3:12028820-12028839 | MS.gene56717:intron | 30.0% | |
| GTCCATCAAAGAATACAATA+AGG | - | chr1.3:12027352-12027371 | None:intergenic | 30.0% | |
| GTCCTTATTGTATTCTTTGA+TGG | + | chr1.3:12027347-12027366 | MS.gene56717:intron | 30.0% | |
| GTTTCATCTCTTTCTCTAAA+AGG | + | chr1.3:12028636-12028655 | MS.gene56717:CDS | 30.0% | |
| TAATCTCAAGGACCTATTTA+AGG | - | chr1.3:12027225-12027244 | None:intergenic | 30.0% | |
| TACTGAATGATTTAAACCCT+GGG | + | chr1.3:12028193-12028212 | MS.gene56717:CDS | 30.0% | |
| TGATTCTTCATTCGACATAT+TGG | - | chr1.3:12028601-12028620 | None:intergenic | 30.0% | |
| TGTTCTTTGTGAAAACTTGT+TGG | - | chr1.3:12027922-12027941 | None:intergenic | 30.0% | |
| TTATTGAGCCTTTACTGATA+CGG | + | chr1.3:12028923-12028942 | MS.gene56717:intron | 30.0% | |
| TTCTACATCAAGACATCAAA+GGG | + | chr1.3:12028993-12029012 | MS.gene56717:CDS | 30.0% | |
| ! | ACAAGTTTTCACAAAGAACA+TGG | + | chr1.3:12027922-12027941 | MS.gene56717:CDS | 30.0% |
| ! | ATACCCTAGACAACTTTTTA+TGG | - | chr1.3:12028826-12028845 | None:intergenic | 30.0% |
| ! | TGATTTTACAAGCTGAAACA+TGG | - | chr1.3:12028849-12028868 | None:intergenic | 30.0% |
| !! | ACATGGTCATTTTAAGTCAA+AGG | + | chr1.3:12027939-12027958 | MS.gene56717:CDS | 30.0% |
| !!! | AACTCTGCTATTTTACTAGT+GGG | - | chr1.3:12029249-12029268 | None:intergenic | 30.0% |
| !!! | GCTTATTTTAGGTTTCCTTT+AGG | + | chr1.3:12029378-12029397 | MS.gene56717:CDS | 30.0% |
| AAATCATTCAGTAGTCCACT+TGG | - | chr1.3:12028186-12028205 | None:intergenic | 35.0% | |
| AAGTATAGGCGTTAACAAGA+GGG | + | chr1.3:12028332-12028351 | MS.gene56717:CDS | 35.0% | |
| AATTCCTTCGACATAAGGAA+AGG | - | chr1.3:12029174-12029193 | None:intergenic | 35.0% | |
| AGAGAGATCCAATGAGAATA+TGG | + | chr1.3:12028001-12028020 | MS.gene56717:CDS | 35.0% | |
| AGATCCAATGAGAATATGGA+CGG | + | chr1.3:12028005-12028024 | MS.gene56717:CDS | 35.0% | |
| ATGGTACAGAAAAGGCAATT+GGG | + | chr1.3:12027557-12027576 | MS.gene56717:intron | 35.0% | |
| CAAAGAGAGAACAAATCAAC+AGG | + | chr1.3:12028142-12028161 | MS.gene56717:CDS | 35.0% | |
| CAGATATCCTTCATTGTATC+CGG | + | chr1.3:12027741-12027760 | MS.gene56717:CDS | 35.0% | |
| CTACTGAATGATTTAAACCC+TGG | + | chr1.3:12028192-12028211 | MS.gene56717:CDS | 35.0% | |
| CTTCTACATCAAGACATCAA+AGG | + | chr1.3:12028992-12029011 | MS.gene56717:CDS | 35.0% | |
| GATCTTAACACTGAAGTTTG+TGG | + | chr1.3:12027715-12027734 | MS.gene56717:CDS | 35.0% | |
| GCATAATAAAAACAAGGGGT+TGG | + | chr1.3:12028718-12028737 | MS.gene56717:intron | 35.0% | |
| GCATACAATGTAGAAAAAGC+TGG | + | chr1.3:12028480-12028499 | MS.gene56717:CDS | 35.0% | |
| GCTGCAGGTAATTTCATTAT+TGG | + | chr1.3:12027008-12027027 | MS.gene56717:intron | 35.0% | |
| GGTACCATAAAAAGTTGTCT+AGG | + | chr1.3:12028819-12028838 | MS.gene56717:intron | 35.0% | |
| GTTTCAAAAGAAGAGCAAGA+TGG | + | chr1.3:12027661-12027680 | MS.gene56717:CDS | 35.0% | |
| TAAAATAGCAGAGTTGCATC+AGG | + | chr1.3:12029254-12029273 | MS.gene56717:CDS | 35.0% | |
| TAAGGAGAAGGAATTGTTGT+CGG | + | chr1.3:12027795-12027814 | MS.gene56717:CDS | 35.0% | |
| TACCACAAGGATCATAATTC+TGG | - | chr1.3:12029206-12029225 | None:intergenic | 35.0% | |
| TATGGTACAGAAAAGGCAAT+TGG | + | chr1.3:12027556-12027575 | MS.gene56717:intron | 35.0% | |
| TCAGGAAATTTCATACCACA+AGG | - | chr1.3:12029219-12029238 | None:intergenic | 35.0% | |
| TGTGGTATGAAATTTCCTGA+GGG | + | chr1.3:12029219-12029238 | MS.gene56717:CDS | 35.0% | |
| TTCCTTATGTCGAAGGAATT+TGG | + | chr1.3:12029174-12029193 | MS.gene56717:CDS | 35.0% | |
| TTCTTCATTCGACATATTGG+TGG | - | chr1.3:12028598-12028617 | None:intergenic | 35.0% | |
| TTGTGGTATGAAATTTCCTG+AGG | + | chr1.3:12029218-12029237 | MS.gene56717:CDS | 35.0% | |
| TTTGTCAGTTTAAGAGAGTC+AGG | - | chr1.3:12027267-12027286 | None:intergenic | 35.0% | |
| ! | AAAATAGGAGCATAGGAAGT+AGG | + | chr1.3:12028286-12028305 | MS.gene56717:CDS | 35.0% |
| ! | AAACACGAAAATAGGAGCAT+AGG | + | chr1.3:12028279-12028298 | MS.gene56717:CDS | 35.0% |
| ! | ATTTGGTGAGAAACTCAGTA+AGG | + | chr1.3:12027777-12027796 | MS.gene56717:CDS | 35.0% |
| ! | CTTTTATCCGGATACAATGA+AGG | - | chr1.3:12027751-12027770 | None:intergenic | 35.0% |
| !! | ACTATTTTGTCATGGTCTTG+AGG | + | chr1.3:12029356-12029375 | MS.gene56717:CDS | 35.0% |
| !! | AGAAGTATCCGTATCAGTAA+AGG | - | chr1.3:12028934-12028953 | None:intergenic | 35.0% |
| !! | ATGGTCTTGAGGCTTATTTT+AGG | + | chr1.3:12029367-12029386 | MS.gene56717:CDS | 35.0% |
| !! | ATTTTGACACGTTTTCTGAG+GGG | - | chr1.3:12026966-12026985 | None:intergenic | 35.0% |
| !! | CATTTTGACACGTTTTCTGA+GGG | - | chr1.3:12026967-12026986 | None:intergenic | 35.0% |
| !! | TCATTTTGACACGTTTTCTG+AGG | - | chr1.3:12026968-12026987 | None:intergenic | 35.0% |
| !!! | CAACTCTGCTATTTTACTAG+TGG | - | chr1.3:12029250-12029269 | None:intergenic | 35.0% |
| AAGAGGGTTAATACCCACTT+GGG | + | chr1.3:12026927-12026946 | MS.gene56717:CDS | 40.0% | |
| AAGCAGGAAAGAGAACAACT+TGG | + | chr1.3:12027820-12027839 | MS.gene56717:CDS | 40.0% | |
| AGTGTTAAGATCCAAAACCC+TGG | - | chr1.3:12027707-12027726 | None:intergenic | 40.0% | |
| ATCTCCGTCCATATTCTCAT+TGG | - | chr1.3:12028012-12028031 | None:intergenic | 40.0% | |
| CAAAAGAAGAGCAAGATGGA+AGG | + | chr1.3:12027665-12027684 | MS.gene56717:CDS | 40.0% | |
| CATGGCATAGATTGACCTAA+AGG | - | chr1.3:12029396-12029415 | None:intergenic | 40.0% | |
| CGGATACAATGAAGGATATC+TGG | - | chr1.3:12027743-12027762 | None:intergenic | 40.0% | |
| CTCCAAATTCCTTCGACATA+AGG | - | chr1.3:12029179-12029198 | None:intergenic | 40.0% | |
| CTTTAGGTCAATCTATGCCA+TGG | + | chr1.3:12029394-12029413 | MS.gene56717:CDS | 40.0% | |
| GAACACGAGAGGAATTAATG+TGG | + | chr1.3:12027855-12027874 | MS.gene56717:CDS | 40.0% | |
| GAAGTATAGGCGTTAACAAG+AGG | + | chr1.3:12028331-12028350 | MS.gene56717:CDS | 40.0% | |
| GACCAGAATTATGATCCTTG+TGG | + | chr1.3:12029201-12029220 | MS.gene56717:CDS | 40.0% | |
| GACTGCGTTGTTTGATCATA+TGG | + | chr1.3:12029284-12029303 | MS.gene56717:CDS | 40.0% | |
| GATACTAGATCCGTGAATGT+GGG | + | chr1.3:12027895-12027914 | MS.gene56717:CDS | 40.0% | |
| GCTGCATTAGTTCATCACAA+CGG | - | chr1.3:12028754-12028773 | None:intergenic | 40.0% | |
| GTGTTAAGATCCAAAACCCT+GGG | - | chr1.3:12027706-12027725 | None:intergenic | 40.0% | |
| GTTGTGATGAACTAATGCAG+CGG | + | chr1.3:12028753-12028772 | MS.gene56717:intron | 40.0% | |
| TCAACTTCAACTGTTCATGG+TGG | + | chr1.3:12028051-12028070 | MS.gene56717:CDS | 40.0% | |
| TCGCATCTTTCACATGTTCT+AGG | - | chr1.3:12028359-12028378 | None:intergenic | 40.0% | |
| TGAGAAACTCAGTAAGGAGA+AGG | + | chr1.3:12027783-12027802 | MS.gene56717:CDS | 40.0% | |
| TGAGATGTCACAAATCACCA+AGG | + | chr1.3:12027615-12027634 | MS.gene56717:CDS | 40.0% | |
| TGATACTAGATCCGTGAATG+TGG | + | chr1.3:12027894-12027913 | MS.gene56717:CDS | 40.0% | |
| TTCATGCTTATCTCCCAAGT+GGG | - | chr1.3:12026943-12026962 | None:intergenic | 40.0% | |
| TTGTATCCGGATAAAAGCAG+TGG | + | chr1.3:12027754-12027773 | MS.gene56717:CDS | 40.0% | |
| TTTACCCTCCAAAATCCATG+AGG | - | chr1.3:12028445-12028464 | None:intergenic | 40.0% | |
| ! | CATCGAATGAGTGGAAGTAT+AGG | + | chr1.3:12028318-12028337 | MS.gene56717:CDS | 40.0% |
| ! | GGATGAAGCACTTATTGAAG+AGG | + | chr1.3:12029305-12029324 | MS.gene56717:CDS | 40.0% |
| ! | TACTGTTGCTTCTCAATGGT+TGG | + | chr1.3:12028967-12028986 | MS.gene56717:CDS | 40.0% |
| !! | CCAAATCCACTGCTTTTATC+CGG | - | chr1.3:12027763-12027782 | None:intergenic | 40.0% |
| !! | TCATGGATTTTGGAGGGTAA+AGG | + | chr1.3:12028444-12028463 | MS.gene56717:CDS | 40.0% |
| AACTGTTCATGGTGGCATTC+CGG | + | chr1.3:12028059-12028078 | MS.gene56717:CDS | 45.0% | |
| ACAAAGATTGCAGCTCCAAG+TGG | + | chr1.3:12028168-12028187 | MS.gene56717:CDS | 45.0% | |
| ATTGGATCTCTCTCCTTTGG+AGG | - | chr1.3:12027994-12028013 | None:intergenic | 45.0% | |
| CAGGAAAGAGAACAACTTGG+TGG | + | chr1.3:12027823-12027842 | MS.gene56717:CDS | 45.0% | |
| CTCATTGGATCTCTCTCCTT+TGG | - | chr1.3:12027997-12028016 | None:intergenic | 45.0% | |
| GAAGAGGGTTAATACCCACT+TGG | + | chr1.3:12026926-12026945 | MS.gene56717:CDS | 45.0% | |
| GGAATTGTTGTCGGAAAAGC+AGG | + | chr1.3:12027804-12027823 | MS.gene56717:CDS | 45.0% | |
| GTTCATGCTTATCTCCCAAG+TGG | - | chr1.3:12026944-12026963 | None:intergenic | 45.0% | |
| GTTGCCTTTCCTTATGTCGA+AGG | + | chr1.3:12029167-12029186 | MS.gene56717:CDS | 45.0% | |
| TGACAAAGAACGAGTCCTCA+TGG | + | chr1.3:12028427-12028446 | MS.gene56717:CDS | 45.0% | |
| ! | ACTTGTTGGTCCCACATTCA+CGG | - | chr1.3:12027908-12027927 | None:intergenic | 45.0% |
| ! | CCGGATAAAAGCAGTGGATT+TGG | + | chr1.3:12027760-12027779 | MS.gene56717:CDS | 45.0% |
| ! | CTGCTACTGTTGCTTCTCAA+TGG | + | chr1.3:12028963-12028982 | MS.gene56717:CDS | 45.0% |
| ! | GAAAGAGAACAACTTGGTGG+TGG | + | chr1.3:12027826-12027845 | MS.gene56717:CDS | 45.0% |
| ! | GAACGAGTCCTCATGGATTT+TGG | + | chr1.3:12028434-12028453 | MS.gene56717:CDS | 45.0% |
| ! | GAGTCCTCATGGATTTTGGA+GGG | + | chr1.3:12028438-12028457 | MS.gene56717:CDS | 45.0% |
| ACATCCACGTCCACTGACAA+AGG | - | chr1.3:12027643-12027662 | None:intergenic | 50.0% | |
| CAAGCAGCACATCGAATGAG+TGG | + | chr1.3:12028309-12028328 | MS.gene56717:CDS | 50.0% | |
| CAGAGTTGCATCAGGCAAGA+TGG | + | chr1.3:12029262-12029281 | MS.gene56717:CDS | 50.0% | |
| CTTGAATCTGTGGTTGCTGC+AGG | + | chr1.3:12026993-12027012 | MS.gene56717:CDS | 50.0% | |
| TGGACGGAGATGAAGCGAAA+TGG | + | chr1.3:12028021-12028040 | MS.gene56717:CDS | 50.0% | |
| TTACAGCTTTGCGTCGCAGT+AGG | + | chr1.3:12029115-12029134 | MS.gene56717:intron | 50.0% | |
| TTACTAGTGGGAAGTCCCTC+AGG | - | chr1.3:12029237-12029256 | None:intergenic | 50.0% | |
| ! | CAAGATGGAAGGAGCACATC+GGG | + | chr1.3:12027676-12027695 | MS.gene56717:CDS | 50.0% |
| ! | CGAGTCCTCATGGATTTTGG+AGG | + | chr1.3:12028437-12028456 | MS.gene56717:CDS | 50.0% |
| ! | CTTTTCCTCCCGCGTTTCTT+CGG | - | chr1.3:12028087-12028106 | None:intergenic | 50.0% |
| ! | GCAAGATGGAAGGAGCACAT+CGG | + | chr1.3:12027675-12027694 | MS.gene56717:CDS | 50.0% |
| !! | AGACATCAAAGGGCGTCTTG+CGG | + | chr1.3:12029003-12029022 | MS.gene56717:CDS | 50.0% |
| ! | ATCGGGTAGTCCCAGGGTTT+TGG | + | chr1.3:12027693-12027712 | MS.gene56717:CDS | 55.0% |
| ! | ATTCCGGTGCCGAAGAAACG+CGG | + | chr1.3:12028075-12028094 | MS.gene56717:CDS | 55.0% |
| ! | CACCAAGGTGCCTTTGTCAG+TGG | + | chr1.3:12027630-12027649 | MS.gene56717:CDS | 55.0% |
| ! | GAGCAGTGCTGAACCTCCAA+AGG | + | chr1.3:12027978-12027997 | MS.gene56717:CDS | 55.0% |
| ! | GGTGGTGATGTGAACACGAG+AGG | + | chr1.3:12027844-12027863 | MS.gene56717:CDS | 55.0% |
| !! | GACATCAAAGGGCGTCTTGC+GGG | + | chr1.3:12029004-12029023 | MS.gene56717:CDS | 55.0% |
| !! | GTCCACTGACAAAGGCACCT+TGG | - | chr1.3:12027635-12027654 | None:intergenic | 55.0% |
| CAGCTTTGCGTCGCAGTAGG+AGG | + | chr1.3:12029118-12029137 | MS.gene56717:intron | 60.0% | |
| GAGCACATCGGGTAGTCCCA+GGG | + | chr1.3:12027687-12027706 | MS.gene56717:CDS | 60.0% | |
| GGTGCCTTTGTCAGTGGACG+TGG | + | chr1.3:12027636-12027655 | MS.gene56717:CDS | 60.0% | |
| ! | TTCCGGTGCCGAAGAAACGC+GGG | + | chr1.3:12028076-12028095 | MS.gene56717:CDS | 60.0% |
| CTCCCGCGTTTCTTCGGCAC+CGG | - | chr1.3:12028081-12028100 | None:intergenic | 65.0% | |
| GGAGCACATCGGGTAGTCCC+AGG | + | chr1.3:12027686-12027705 | MS.gene56717:CDS | 65.0% | |
| ! | CGGTGCCGAAGAAACGCGGG+AGG | + | chr1.3:12028079-12028098 | MS.gene56717:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 12026918 | 12029422 | 12026918 | ID=MS.gene56717 |
| chr1.3 | mRNA | 12026918 | 12029422 | 12026918 | ID=MS.gene56717.t1;Parent=MS.gene56717 |
| chr1.3 | exon | 12026918 | 12027014 | 12026918 | ID=MS.gene56717.t1.exon1;Parent=MS.gene56717.t1 |
| chr1.3 | CDS | 12026918 | 12027014 | 12026918 | ID=cds.MS.gene56717.t1;Parent=MS.gene56717.t1 |
| chr1.3 | exon | 12027566 | 12028657 | 12027566 | ID=MS.gene56717.t1.exon2;Parent=MS.gene56717.t1 |
| chr1.3 | CDS | 12027566 | 12028657 | 12027566 | ID=cds.MS.gene56717.t1;Parent=MS.gene56717.t1 |
| chr1.3 | exon | 12028963 | 12029025 | 12028963 | ID=MS.gene56717.t1.exon3;Parent=MS.gene56717.t1 |
| chr1.3 | CDS | 12028963 | 12029025 | 12028963 | ID=cds.MS.gene56717.t1;Parent=MS.gene56717.t1 |
| chr1.3 | exon | 12029121 | 12029422 | 12029121 | ID=MS.gene56717.t1.exon4;Parent=MS.gene56717.t1 |
| chr1.3 | CDS | 12029121 | 12029422 | 12029121 | ID=cds.MS.gene56717.t1;Parent=MS.gene56717.t1 |
| Gene Sequence |
| Protein sequence |
