AlfalfaGEDB | MS.gene012794

M. sativa cultivar XinJiangDaYe / MS.gene012794

KEGG: -
GO: GO:0003674 GO:0003824 GO:0016491
PFAM: PF00106.28

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene012794.t1	XP_013458718.1	97	237	7	0	1	237	1	237	5.10E-124	453.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene012794.t1	Q9SY73	71.6	229	61	3	9	237	18	242	1.5e-87	323.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene012794.t1	A0A072V3L6	97.0	237	7	0	1	237	1	237	3.7e-124	453.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene012794	MS.gene62194	PPI
MS.gene012794	MS.gene25667	PPI
MS.gene012794	MS.gene30551	PPI
MS.gene012794	MS.gene63306	PPI
MS.gene012794	MS.gene23019	PPI
MS.gene012794	MS.gene055846	PPI
MS.gene012794	MS.gene63300	PPI
MS.gene012794	MS.gene033685	PPI
MS.gene012794	MS.gene25674	PPI
MS.gene012794	MS.gene85724	PPI
MS.gene012794	MS.gene87780	PPI
MS.gene012794	MS.gene008153	PPI
MS.gene012794	MS.gene80360	PPI
MS.gene012794	MS.gene008160	PPI
MS.gene012794	MS.gene08756	PPI
MS.gene012794	MS.gene63484	PPI
MS.gene012794	MS.gene050131	PPI
MS.gene012794	MS.gene87026	PPI
MS.gene012794	MS.gene007678	PPI
MS.gene012794	MS.gene52743	PPI
MS.gene012794	MS.gene028938	PPI
MS.gene012794	MS.gene003992	PPI
MS.gene012794	MS.gene62195	PPI
MS.gene012794	MS.gene050431	PPI
MS.gene012794	MS.gene41122	PPI
MS.gene012794	MS.gene63308	PPI
MS.gene012794	MS.gene064756	PPI
MS.gene012794	MS.gene018066	PPI
MS.gene012794	MS.gene019786	PPI
MS.gene012794	MS.gene007002	PPI
MS.gene012794	MS.gene008162	PPI
MS.gene012794	MS.gene072664	PPI
MS.gene012794	MS.gene07097	PPI
MS.gene012794	MS.gene021164	PPI
MS.gene012794	MS.gene52742	PPI
MS.gene012794	MS.gene31507	PPI
MS.gene012794	MS.gene28847	PPI
MS.gene012794	MS.gene42260	PPI
MS.gene012794	MS.gene07096	PPI
MS.gene012794	MS.gene050432	PPI
MS.gene012794	MS.gene007006	PPI
MS.gene012794	MS.gene63483	PPI
MS.gene012794	MS.gene50524	PPI
MS.gene012794	MS.gene50522	PPI
MS.gene012794	MS.gene62187	PPI
MS.gene012794	MS.gene28848	PPI
MS.gene012794	MS.gene42856	PPI
MS.gene012794	MS.gene03319	PPI
MS.gene012794	MS.gene63307	PPI
MS.gene012794	MS.gene08694	PPI
MS.gene012794	MS.gene63482	PPI
MS.gene41122	MS.gene012794	PPI
MS.gene012794	MS.gene043387	PPI
MS.gene012794	MS.gene63403	PPI
MS.gene012794	MS.gene04700	PPI
MS.gene012794	MS.gene014425	PPI
MS.gene012794	MS.gene62193	PPI
MS.gene012794	MS.gene08695	PPI
MS.gene012794	MS.gene008161	PPI
MS.gene012794	MS.gene006999	PPI
MS.gene012794	MS.gene073684	PPI
MS.gene012794	MS.gene42114	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene012794.t1	MTR_4g134660	97.046	237	7	0	1	237	1	237	3.18e-170	468
MS.gene012794.t1	MTR_4g066050	79.832	238	44	3	3	237	21	257	1.32e-134	379
MS.gene012794.t1	MTR_4g070490	72.269	238	62	3	3	237	21	257	2.03e-119	340
MS.gene012794.t1	MTR_4g070500	61.111	234	52	2	4	237	22	216	8.93e-93	271
MS.gene012794.t1	MTR_3g085740	32.984	191	122	5	11	199	80	266	8.40e-19	84.0
MS.gene012794.t1	MTR_3g068085	32.544	169	111	2	10	178	19	184	1.81e-15	73.9
MS.gene012794.t1	MTR_7g094510	30.244	205	122	6	6	198	6	201	2.33e-15	73.6
MS.gene012794.t1	MTR_7g080410	30.688	189	121	5	13	195	45	229	2.56e-15	73.9
MS.gene012794.t1	MTR_7g080410	30.688	189	121	5	13	195	45	229	2.99e-15	73.9
MS.gene012794.t1	MTR_7g071680	30.846	201	125	7	4	198	27	219	1.00e-14	72.4
MS.gene012794.t1	MTR_8g044240	32.161	199	123	8	11	200	74	269	2.63e-14	71.6
MS.gene012794.t1	MTR_7g063320	29.534	193	132	3	9	200	18	207	2.98e-14	70.5
MS.gene012794.t1	MTR_4g131740	27.461	193	128	4	9	193	43	231	8.46e-14	69.7
MS.gene012794.t1	MTR_7g063330	29.688	192	131	3	10	200	19	207	8.68e-14	69.3
MS.gene012794.t1	MTR_3g068070	31.361	169	113	2	10	178	19	184	1.27e-13	68.9
MS.gene012794.t1	MTR_4g097510	30.729	192	118	7	11	197	7	188	1.01e-12	66.2
MS.gene012794.t1	MTR_4g058840	28.358	201	136	6	6	200	11	209	1.19e-12	66.2
MS.gene012794.t1	MTR_4g058820	28.358	201	136	6	6	200	11	209	1.19e-12	66.2
MS.gene012794.t1	MTR_4g058810	27.363	201	138	6	6	200	11	209	9.08e-12	63.5
MS.gene012794.t1	MTR_4g052320	27.928	222	147	7	12	230	14	225	1.01e-11	63.5
MS.gene012794.t1	MTR_7g083870	29.907	214	130	7	1	210	30	227	1.63e-11	63.2
MS.gene012794.t1	MTR_1196s0010	30.457	197	116	8	8	196	276	459	1.89e-11	63.5
MS.gene012794.t1	MTR_6g023590	25.481	208	149	6	12	216	19	223	2.38e-11	62.4
MS.gene012794.t1	MTR_4g064887	27.749	191	134	3	10	199	19	206	4.26e-11	61.2
MS.gene012794.t1	MTR_4g064883	30.256	195	122	6	10	198	18	204	6.29e-11	60.5
MS.gene012794.t1	MTR_4g064887	27.749	191	134	3	10	199	19	206	7.10e-11	60.8
MS.gene012794.t1	MTR_3g068065	26.627	169	121	2	10	178	21	186	7.54e-11	60.8
MS.gene012794.t1	MTR_4g064883	30.256	195	122	6	10	198	18	204	9.56e-11	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene012794.t1	AT1G10310	71.616	229	61	3	9	237	18	242	2.32e-118	337
MS.gene012794.t1	AT5G10050	30.252	238	144	10	11	237	10	236	1.28e-16	77.4
MS.gene012794.t1	AT1G63380	30.000	210	126	8	6	202	15	216	1.56e-16	77.0
MS.gene012794.t1	AT1G63380	30.000	210	126	8	6	202	19	220	1.70e-16	77.0
MS.gene012794.t1	AT1G63380	30.000	210	126	8	6	202	22	223	1.75e-16	77.0
MS.gene012794.t1	AT1G63380	30.000	210	126	8	6	202	17	218	1.93e-16	77.0
MS.gene012794.t1	AT5G65205	31.220	205	118	8	1	197	1	190	3.88e-16	76.3
MS.gene012794.t1	AT2G17845	30.198	202	128	5	6	197	47	245	6.03e-16	75.9
MS.gene012794.t1	AT1G62610	29.524	210	127	8	6	202	13	214	6.62e-16	75.5
MS.gene012794.t1	AT1G62610	29.524	210	127	8	6	202	14	215	6.70e-16	75.5
MS.gene012794.t1	AT1G62610	29.524	210	127	8	6	202	15	216	6.78e-16	75.5
MS.gene012794.t1	AT1G62610	29.524	210	127	8	6	202	19	220	9.02e-16	75.1
MS.gene012794.t1	AT5G18210	29.064	203	130	7	6	198	8	206	3.18e-15	73.2
MS.gene012794.t1	AT5G18210	29.064	203	130	7	6	198	8	206	4.50e-15	73.2
MS.gene012794.t1	AT3G55290	30.000	200	128	5	6	197	17	212	1.06e-14	72.0
MS.gene012794.t1	AT3G55290	30.000	200	128	5	6	197	18	213	1.19e-14	72.0
MS.gene012794.t1	AT3G55310	30.348	201	126	7	6	197	17	212	2.48e-14	70.9
MS.gene012794.t1	AT1G24360	28.796	191	130	5	11	199	79	265	1.27e-13	69.3
MS.gene012794.t1	AT3G51680	29.851	201	133	5	4	198	30	228	2.78e-13	68.2
MS.gene012794.t1	AT5G19200	30.270	185	120	6	9	190	38	216	4.44e-13	67.8
MS.gene012794.t1	AT3G46170	30.151	199	129	6	6	197	26	221	6.63e-13	67.0
MS.gene012794.t1	AT1G07440	27.692	195	137	3	9	202	15	206	7.23e-13	66.6
MS.gene012794.t1	AT5G04900	29.798	198	128	7	11	200	82	276	2.36e-12	65.9
MS.gene012794.t1	AT3G06060	29.545	176	116	5	6	179	37	206	2.42e-12	65.9
MS.gene012794.t1	AT3G06060	29.545	176	116	5	6	179	54	223	3.23e-12	65.5
MS.gene012794.t1	AT5G50690	31.579	209	115	9	9	202	48	243	4.27e-12	64.3
MS.gene012794.t1	AT5G50590	31.579	209	115	9	9	202	48	243	4.27e-12	64.3
MS.gene012794.t1	AT3G26760	28.713	202	135	5	4	202	34	229	4.90e-12	64.7
MS.gene012794.t1	AT2G29350	31.609	174	114	3	6	178	15	184	1.17e-11	62.8
MS.gene012794.t1	AT2G29150	28.718	195	132	4	10	202	20	209	1.29e-11	63.2
MS.gene012794.t1	AT2G29350	31.609	174	114	3	6	178	15	184	1.45e-11	63.2
MS.gene012794.t1	AT5G06060	30.114	176	114	4	6	178	9	178	1.49e-11	62.8
MS.gene012794.t1	AT3G47360	26.866	201	130	5	4	197	43	233	5.57e-11	61.6
MS.gene012794.t1	AT5G50600	30.102	196	120	7	9	197	48	233	5.57e-11	62.0
MS.gene012794.t1	AT5G50700	30.102	196	120	7	9	197	48	233	5.57e-11	62.0
MS.gene012794.t1	AT2G29260	28.421	190	132	3	10	198	72	258	6.89e-11	61.6

Find 70 sgRNAs with CRISPR-Local

Find 67 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CATCTTGTTGTTCTTGTTAA+TGG	0.155577	8.1:+195008	None:intergenic
GAAGAGATGATTATGATTAT+TGG	0.247683	8.1:+195134	None:intergenic
GACATGCTTGCTTCTTGCTT+TGG	0.296337	8.1:-194709	MS.gene012794:CDS
AGTTAACTTGTCTTCTGGTT+GGG	0.316946	8.1:-194866	MS.gene012794:CDS
AAGAGATGATTATGATTATT+GGG	0.323077	8.1:+195135	None:intergenic
ATTATAGTTAACTTGTCTTC+TGG	0.326492	8.1:-194871	MS.gene012794:CDS
CTCCTTACTGTGCATCCAAA+TGG	0.350241	8.1:-194819	MS.gene012794:CDS
ACAGATGGCTCGCACTGTTA+TGG	0.356017	8.1:-195076	MS.gene012794:CDS
AATCGAGGTCACACCATTAT+AGG	0.357867	8.1:-195207	MS.gene012794:CDS
TCTTCTGGTTGGGGAAGATC+AGG	0.385658	8.1:-194856	MS.gene012794:CDS
GAGTCCTTCAATAGCCCATT+TGG	0.398492	8.1:+194804	None:intergenic
TCCCTCCGAAGAGTTTGATT+TGG	0.401676	8.1:-194977	MS.gene012794:CDS
TAGGGCTCTTGCTATTGAAT+TGG	0.402272	8.1:-195232	MS.gene012794:CDS
CGGAATGGGTGGGAAGGGAA+TGG	0.403700	8.1:-195298	None:intergenic
AATAGAAGTGTGTTGATTAC+TGG	0.408672	8.1:-195273	MS.gene012794:CDS
AATCTTACTCCAGCAGATAA+TGG	0.413046	8.1:-194544	MS.gene012794:CDS
AGCACGAGAACAACCTATAA+TGG	0.423172	8.1:+195194	None:intergenic
ACTGGTGTTAGCAAAGGAAT+TGG	0.432533	8.1:-195255	MS.gene012794:CDS
GGAATGGGTGGGAAGGGAAT+GGG	0.435982	8.1:-195297	MS.gene012794:CDS
TTTATCAATCCCCTCAATCA+TGG	0.447887	8.1:-194672	MS.gene012794:intron
TATAGGTTGTTCTCGTGCTC+AGG	0.451147	8.1:-195190	MS.gene012794:CDS
GCTGTTGTCGCACTCAATCC+TGG	0.475014	8.1:-194745	MS.gene012794:CDS
GTTAACTTGTCTTCTGGTTG+GGG	0.475108	8.1:-194865	MS.gene012794:CDS
TAGTTAACTTGTCTTCTGGT+TGG	0.476654	8.1:-194867	MS.gene012794:CDS
GGAGTCGGAATGGGTGGGAA+GGG	0.480505	8.1:-195303	None:intergenic
TCCTTACTGTGCATCCAAAT+GGG	0.481610	8.1:-194818	MS.gene012794:CDS
AGGAGTCGGAATGGGTGGGA+AGG	0.485986	8.1:-195304	None:intergenic
GTGTTAGCAAAGGAATTGGT+AGG	0.489002	8.1:-195251	MS.gene012794:CDS
CGAAGAGTTTGATTTGGTGA+TGG	0.497675	8.1:-194971	MS.gene012794:CDS
GCATCCAAATGGGCTATTGA+AGG	0.497887	8.1:-194808	MS.gene012794:CDS
CATCACCAAATCAAACTCTT+CGG	0.511093	8.1:+194972	None:intergenic
AGAGAAGCACCATTATCTGC+TGG	0.512127	8.1:+194535	None:intergenic
GTGATGGATACAAACTTGAA+AGG	0.521934	8.1:-194955	MS.gene012794:CDS
AACAAACAAACCATGATTGA+GGG	0.523875	8.1:+194662	None:intergenic
TAACAAACAAACCATGATTG+AGG	0.525432	8.1:+194661	None:intergenic
GCCCATTTGGATGCACAGTA+AGG	0.529397	8.1:+194817	None:intergenic
CTCACAGATGAGACTTCAAA+CGG	0.545400	8.1:+194510	None:intergenic
TGGAGCTGACGTCGACATTG+AGG	0.545855	8.1:+195112	None:intergenic
TTCCATAATCAGGGCTCTCA+AGG	0.550794	8.1:-194584	MS.gene012794:intron
TAAAGAGTTACCACAAGGAA+TGG	0.552214	8.1:-194767	MS.gene012794:CDS
CAACGACAGCGTTCAACAGA+TGG	0.559184	8.1:-195091	MS.gene012794:CDS
GCGCTGTTCACAATAACATC+AGG	0.559509	8.1:+195036	None:intergenic
ATGTCAGTGTTGATGACACC+AGG	0.567373	8.1:+194727	None:intergenic
CATCTGTTGAACGCTGTCGT+TGG	0.569321	8.1:+195092	None:intergenic
TTAACAAGAACAACAAGATG+TGG	0.570016	8.1:-195005	MS.gene012794:CDS
AAAAGAGGAGTCGGAATGGG+TGG	0.574723	8.1:-195309	None:intergenic
AAAGAGGAGTCGGAATGGGT+GGG	0.595632	8.1:-195308	None:intergenic
CACTGTTATGGAAACGAAGG+GGG	0.596170	8.1:-195064	MS.gene012794:CDS
ACCAAATCAAACTCTTCGGA+GGG	0.599420	8.1:+194976	None:intergenic
GCTATTGAATTGGCGAATCG+AGG	0.601300	8.1:-195222	MS.gene012794:CDS
CTCATGATCAACAACAACAA+TGG	0.602640	8.1:-194901	MS.gene012794:CDS
GATGTTATTGTGAACAGCGC+AGG	0.602911	8.1:-195033	MS.gene012794:CDS
TTGTTGTTGTTGATCATGAG+AGG	0.603072	8.1:+194904	None:intergenic
CACCAAATCAAACTCTTCGG+AGG	0.609746	8.1:+194975	None:intergenic
TGTTGTTGTTGATCATGAGA+GGG	0.610244	8.1:+194905	None:intergenic
CGCACTGTTATGGAAACGAA+GGG	0.616633	8.1:-195066	MS.gene012794:CDS
ATCAACAACAACAATGGAGA+AGG	0.620158	8.1:-194895	MS.gene012794:CDS
TGGAGTAAGATTGAGAATCA+TGG	0.623215	8.1:+194555	None:intergenic
CTGTTCACAATAACATCAGG+TGG	0.624734	8.1:+195039	None:intergenic
TTGATTACTGGTGTTAGCAA+AGG	0.625224	8.1:-195261	MS.gene012794:CDS
TCGCACTGTTATGGAAACGA+AGG	0.628854	8.1:-195067	MS.gene012794:CDS
GATGAAATGTCTCAACACAT+TGG	0.632609	8.1:+194927	None:intergenic
TAACAAGAACAACAAGATGT+GGG	0.638628	8.1:-195004	MS.gene012794:CDS
TGTTAGCAAAGGAATTGGTA+GGG	0.642718	8.1:-195250	MS.gene012794:CDS
ACAAACAAACCATGATTGAG+GGG	0.655381	8.1:+194663	None:intergenic
GCGACAACAGCCATTCCTTG+TGG	0.658566	8.1:+194757	None:intergenic
GCACTGTTATGGAAACGAAG+GGG	0.685289	8.1:-195065	MS.gene012794:CDS
ACTGTTATGGAAACGAAGGG+GGG	0.707582	8.1:-195063	MS.gene012794:CDS
GTAGCTAAAGAGTTACCACA+AGG	0.726588	8.1:-194772	MS.gene012794:CDS
AGTAAGATTGAGAATCATGG+TGG	0.814994	8.1:+194558	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TAATAATAATTCCATAATCA+GGG	-	chr8.1:195226-195245	MS.gene012794:CDS	15.0%
!!	AAGAGATGATTATGATTATT+GGG	+	chr8.1:194687-194706	None:intergenic	20.0%
!!	CTAATAATAATTCCATAATC+AGG	-	chr8.1:195225-195244	MS.gene012794:CDS	20.0%
!	GAAGAGATGATTATGATTAT+TGG	+	chr8.1:194688-194707	None:intergenic	25.0%
!	GAATGAAAGAATAGTAAACA+AGG	+	chr8.1:195187-195206	None:intergenic	25.0%
!!!	ATTATAGTTAACTTGTCTTC+TGG	-	chr8.1:194948-194967	MS.gene012794:CDS	25.0%
	AACAAACAAACCATGATTGA+GGG	+	chr8.1:195160-195179	None:intergenic	30.0%
	TAACAAACAAACCATGATTG+AGG	+	chr8.1:195161-195180	None:intergenic	30.0%
	TAACAAGAACAACAAGATGT+GGG	-	chr8.1:194815-194834	MS.gene012794:CDS	30.0%
	TTAACAAGAACAACAAGATG+TGG	-	chr8.1:194814-194833	MS.gene012794:CDS	30.0%
!!	AATAGAAGTGTGTTGATTAC+TGG	-	chr8.1:194546-194565	MS.gene012794:CDS	30.0%
!!	CATCTTGTTGTTCTTGTTAA+TGG	+	chr8.1:194814-194833	None:intergenic	30.0%
	AATCTTACTCCAGCAGATAA+TGG	-	chr8.1:195275-195294	MS.gene012794:CDS	35.0%
	ACAAACAAACCATGATTGAG+GGG	+	chr8.1:195159-195178	None:intergenic	35.0%
	AGTAAGATTGAGAATCATGG+TGG	+	chr8.1:195264-195283	None:intergenic	35.0%
	ATCAACAACAACAATGGAGA+AGG	-	chr8.1:194924-194943	MS.gene012794:CDS	35.0%
	CATCACCAAATCAAACTCTT+CGG	+	chr8.1:194850-194869	None:intergenic	35.0%
	CTCATGATCAACAACAACAA+TGG	-	chr8.1:194918-194937	MS.gene012794:CDS	35.0%
	GATGAAATGTCTCAACACAT+TGG	+	chr8.1:194895-194914	None:intergenic	35.0%
	TAAAGAGTTACCACAAGGAA+TGG	-	chr8.1:195052-195071	MS.gene012794:CDS	35.0%
	TGGAGTAAGATTGAGAATCA+TGG	+	chr8.1:195267-195286	None:intergenic	35.0%
	TGTTAGCAAAGGAATTGGTA+GGG	-	chr8.1:194569-194588	MS.gene012794:CDS	35.0%
	TTTATCAATCCCCTCAATCA+TGG	-	chr8.1:195147-195166	MS.gene012794:CDS	35.0%
!	TGTTGTTGTTGATCATGAGA+GGG	+	chr8.1:194917-194936	None:intergenic	35.0%
!	TTGATTACTGGTGTTAGCAA+AGG	-	chr8.1:194558-194577	MS.gene012794:CDS	35.0%
!	TTGTTGTTGTTGATCATGAG+AGG	+	chr8.1:194918-194937	None:intergenic	35.0%
!!	AGTTAACTTGTCTTCTGGTT+GGG	-	chr8.1:194953-194972	MS.gene012794:CDS	35.0%
!!	GTGATGGATACAAACTTGAA+AGG	-	chr8.1:194864-194883	MS.gene012794:CDS	35.0%
!!	TAGTTAACTTGTCTTCTGGT+TGG	-	chr8.1:194952-194971	MS.gene012794:CDS	35.0%
	AATCGAGGTCACACCATTAT+AGG	-	chr8.1:194612-194631	MS.gene012794:intron	40.0%
	ACCAAATCAAACTCTTCGGA+GGG	+	chr8.1:194846-194865	None:intergenic	40.0%
	AGCACGAGAACAACCTATAA+TGG	+	chr8.1:194628-194647	None:intergenic	40.0%
	CTGTTCACAATAACATCAGG+TGG	+	chr8.1:194783-194802	None:intergenic	40.0%
	GTAGCTAAAGAGTTACCACA+AGG	-	chr8.1:195047-195066	MS.gene012794:CDS	40.0%
	GTGTTAGCAAAGGAATTGGT+AGG	-	chr8.1:194568-194587	MS.gene012794:CDS	40.0%
	TCCTTACTGTGCATCCAAAT+GGG	-	chr8.1:195001-195020	MS.gene012794:CDS	40.0%
!	ACTGGTGTTAGCAAAGGAAT+TGG	-	chr8.1:194564-194583	MS.gene012794:CDS	40.0%
!!	CGAAGAGTTTGATTTGGTGA+TGG	-	chr8.1:194848-194867	MS.gene012794:CDS	40.0%
!!	GTTAACTTGTCTTCTGGTTG+GGG	-	chr8.1:194954-194973	MS.gene012794:CDS	40.0%
!!	TAGGGCTCTTGCTATTGAAT+TGG	-	chr8.1:194587-194606	MS.gene012794:intron	40.0%
	ACTGTTATGGAAACGAAGGG+GGG	-	chr8.1:194756-194775	MS.gene012794:CDS	45.0%
	CACCAAATCAAACTCTTCGG+AGG	+	chr8.1:194847-194866	None:intergenic	45.0%
	CACTGTTATGGAAACGAAGG+GGG	-	chr8.1:194755-194774	MS.gene012794:CDS	45.0%
	CGCACTGTTATGGAAACGAA+GGG	-	chr8.1:194753-194772	MS.gene012794:CDS	45.0%
	CTCCTTACTGTGCATCCAAA+TGG	-	chr8.1:195000-195019	MS.gene012794:CDS	45.0%
	GACATGCTTGCTTCTTGCTT+TGG	-	chr8.1:195110-195129	MS.gene012794:CDS	45.0%
	GAGTCCTTCAATAGCCCATT+TGG	+	chr8.1:195018-195037	None:intergenic	45.0%
	GATGTTATTGTGAACAGCGC+AGG	-	chr8.1:194786-194805	MS.gene012794:CDS	45.0%
	GCACTGTTATGGAAACGAAG+GGG	-	chr8.1:194754-194773	MS.gene012794:CDS	45.0%
	GCGCTGTTCACAATAACATC+AGG	+	chr8.1:194786-194805	None:intergenic	45.0%
	GCTATTGAATTGGCGAATCG+AGG	-	chr8.1:194597-194616	MS.gene012794:intron	45.0%
	TATAGGTTGTTCTCGTGCTC+AGG	-	chr8.1:194629-194648	MS.gene012794:intron	45.0%
	TCCCTCCGAAGAGTTTGATT+TGG	-	chr8.1:194842-194861	MS.gene012794:CDS	45.0%
	TCGCACTGTTATGGAAACGA+AGG	-	chr8.1:194752-194771	MS.gene012794:CDS	45.0%
	TTCCATAATCAGGGCTCTCA+AGG	-	chr8.1:195235-195254	MS.gene012794:CDS	45.0%
!!	AGAGAAGCACCATTATCTGC+TGG	+	chr8.1:195287-195306	None:intergenic	45.0%
!!	ATGTCAGTGTTGATGACACC+AGG	+	chr8.1:195095-195114	None:intergenic	45.0%
!!	GCATCCAAATGGGCTATTGA+AGG	-	chr8.1:195011-195030	MS.gene012794:CDS	45.0%
	ACAGATGGCTCGCACTGTTA+TGG	-	chr8.1:194743-194762	MS.gene012794:CDS	50.0%
	CAACGACAGCGTTCAACAGA+TGG	-	chr8.1:194728-194747	MS.gene012794:CDS	50.0%
	CATCTGTTGAACGCTGTCGT+TGG	+	chr8.1:194730-194749	None:intergenic	50.0%
	GCCCATTTGGATGCACAGTA+AGG	+	chr8.1:195005-195024	None:intergenic	50.0%
	TGCCTTGAGAGCCCTGATTA+TGG	+	chr8.1:195240-195259	None:intergenic	50.0%
!	TCTTCTGGTTGGGGAAGATC+AGG	-	chr8.1:194963-194982	MS.gene012794:CDS	50.0%
	GCGACAACAGCCATTCCTTG+TGG	+	chr8.1:195065-195084	None:intergenic	55.0%
	GCTGTTGTCGCACTCAATCC+TGG	-	chr8.1:195074-195093	MS.gene012794:CDS	55.0%
	TGGAGCTGACGTCGACATTG+AGG	+	chr8.1:194710-194729	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.1	gene	194525	195316	194525	ID=MS.gene012794
chr8.1	mRNA	194525	195316	194525	ID=MS.gene012794.t1;Parent=MS.gene012794
chr8.1	exon	194673	195316	194673	ID=MS.gene012794.t1.exon1;Parent=MS.gene012794.t1
chr8.1	CDS	194673	195316	194673	ID=cds.MS.gene012794.t1;Parent=MS.gene012794.t1
chr8.1	exon	194525	194594	194525	ID=MS.gene012794.t1.exon2;Parent=MS.gene012794.t1
chr8.1	CDS	194525	194594	194525	ID=cds.MS.gene012794.t1;Parent=MS.gene012794.t1

Gene Sequence

>MS.gene012794

ATGGGTGGGAAGGGAATGGGAAATAGAAGTGTGTTGATTACTGGTGTTAGCAAAGGAATTGGTAGGGCTCTTGCTATTGAATTGGCGAATCGAGGTCACACCATTATAGGTTGTTCTCGTGCTCAGGATAAGCTCGATTCACTTCAATCTCTTTTACTTCCCAATAATCATAATCATCTCTTCCTCAATGTCGACGTCAGCTCCAACGACAGCGTTCAACAGATGGCTCGCACTGTTATGGAAACGAAGGGGGGTCCACCTGATGTTATTGTGAACAGCGCAGGTACCATTAACAAGAACAACAAGATGTGGGAAGTTCCCTCCGAAGAGTTTGATTTGGTGATGGATACAAACTTGAAAGGAACTGCCAATGTGTTGAGACATTTCATCCCTCTCATGATCAACAACAACAATGGAGAAGGTATTATAGTTAACTTGTCTTCTGGTTGGGGAAGATCAGGTGCAGCACTTGTTGCTCCTTACTGTGCATCCAAATGGGCTATTGAAGGACTCACTAAGTCTGTAGCTAAAGAGTTACCACAAGGAATGGCTGTTGTCGCACTCAATCCTGGTGTCATCAACACTGACATGCTTGCTTCTTGCTTTGGTGCTTCTGCTTCTCTTTATCAATCCCCTCAATCATGGTTTGTTTGTTACTTCCTTGTTTACTATTCTTTCATTCACATATGTTTTTGTTTTACTAATAATAATTCCATAATCAGGGCTCTCAAGGCAGCCACCATGATTCTCAATCTTACTCCAGCAGATAATGGTGCTTCTCTCTCCGTTTGA

Protein sequence

>MS.gene012794.t1

MGGKGMGNRSVLITGVSKGIGRALAIELANRGHTIIGCSRAQDKLDSLQSLLLPNNHNHLFLNVDVSSNDSVQQMARTVMETKGGPPDVIVNSAGTINKNNKMWEVPSEEFDLVMDTNLKGTANVLRHFIPLMINNNNGEGIIVNLSSGWGRSGAALVAPYCASKWAIEGLTKSVAKELPQGMAVVALNPGVINTDMLASCFGASASLYQSPQSWALKAATMILNLTPADNGASLSV