Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003925.t1 | XP_013456232.1 | 94.6 | 257 | 14 | 0 | 1 | 257 | 1 | 257 | 7.60E-134 | 486.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003925.t1 | Q9SY73 | 67.1 | 231 | 70 | 3 | 27 | 257 | 18 | 242 | 2.4e-83 | 310.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003925.t1 | A0A072UMG3 | 94.6 | 257 | 14 | 0 | 1 | 257 | 1 | 257 | 5.5e-134 | 486.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003925.t1 | MTR_4g066050 | 94.553 | 257 | 14 | 0 | 1 | 257 | 1 | 257 | 0.0 | 501 |
MS.gene003925.t1 | MTR_4g070490 | 77.519 | 258 | 56 | 2 | 1 | 257 | 1 | 257 | 7.36e-139 | 390 |
MS.gene003925.t1 | MTR_4g134660 | 77.311 | 238 | 50 | 3 | 21 | 257 | 3 | 237 | 5.84e-131 | 370 |
MS.gene003925.t1 | MTR_4g070500 | 68.872 | 257 | 39 | 2 | 1 | 257 | 1 | 216 | 5.94e-102 | 296 |
MS.gene003925.t1 | MTR_7g080410 | 29.231 | 195 | 128 | 4 | 26 | 215 | 40 | 229 | 2.54e-15 | 74.3 |
MS.gene003925.t1 | MTR_7g080410 | 29.231 | 195 | 128 | 4 | 26 | 215 | 40 | 229 | 3.84e-15 | 73.9 |
MS.gene003925.t1 | MTR_7g094510 | 29.000 | 200 | 129 | 6 | 26 | 218 | 8 | 201 | 4.45e-15 | 73.2 |
MS.gene003925.t1 | MTR_4g131740 | 25.128 | 195 | 132 | 4 | 27 | 213 | 43 | 231 | 5.71e-13 | 67.8 |
MS.gene003925.t1 | MTR_3g085740 | 30.052 | 193 | 127 | 6 | 29 | 219 | 80 | 266 | 6.73e-13 | 67.8 |
MS.gene003925.t1 | MTR_7g083870 | 30.841 | 214 | 126 | 8 | 21 | 230 | 32 | 227 | 3.22e-12 | 65.5 |
MS.gene003925.t1 | MTR_7g071680 | 28.500 | 200 | 131 | 5 | 27 | 222 | 32 | 223 | 3.43e-12 | 65.5 |
MS.gene003925.t1 | MTR_3g087850 | 28.283 | 198 | 129 | 6 | 22 | 217 | 24 | 210 | 2.76e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003925.t1 | AT1G10310 | 67.100 | 231 | 70 | 3 | 27 | 257 | 18 | 242 | 8.60e-112 | 322 |
MS.gene003925.t1 | AT3G51680 | 29.126 | 206 | 136 | 5 | 27 | 226 | 35 | 236 | 7.41e-14 | 70.5 |
MS.gene003925.t1 | AT5G65205 | 29.949 | 197 | 125 | 6 | 23 | 217 | 5 | 190 | 4.99e-13 | 67.8 |
MS.gene003925.t1 | AT1G24470 | 29.646 | 226 | 136 | 9 | 30 | 243 | 56 | 270 | 3.13e-12 | 65.9 |
MS.gene003925.t1 | AT5G04900 | 30.500 | 200 | 126 | 7 | 29 | 220 | 82 | 276 | 5.31e-11 | 62.4 |
MS.gene003925.t1 | AT1G67730 | 26.609 | 233 | 124 | 8 | 30 | 239 | 55 | 263 | 8.82e-11 | 61.6 |
Find 85 sgRNAs with CRISPR-Local
Find 85 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCCTCCGAAGCCCATGATTC+TGG | 0.154630 | 4.2:-39657526 | None:intergenic |
TCCCATTTCATTCTTGTTCT+TGG | 0.158942 | 4.2:-39657290 | None:intergenic |
GCCCATTTGGATGCACAATA+AGG | 0.287508 | 4.2:-39657370 | None:intergenic |
TATTCATCAGCGTTGATGTT+AGG | 0.357492 | 4.2:+39657065 | MS.gene003925:CDS |
GAGTCCTTCAATTGCCCATT+TGG | 0.357810 | 4.2:-39657383 | None:intergenic |
CCTCCGAAGCCCATGATTCT+GGG | 0.369639 | 4.2:-39657525 | None:intergenic |
AGTGAACATGTCTTCTGGTT+GGG | 0.374134 | 4.2:+39657321 | MS.gene003925:CDS |
ACACCGTTCACTATAATATC+TGG | 0.378736 | 4.2:-39657145 | None:intergenic |
TTCCAAGAACAAGAATGAAA+TGG | 0.381572 | 4.2:+39657288 | MS.gene003925:CDS |
AGAGATGGCACGCATTGTTA+TGG | 0.382832 | 4.2:+39657105 | MS.gene003925:CDS |
ATAATAGTGAACATGTCTTC+TGG | 0.395450 | 4.2:+39657316 | MS.gene003925:CDS |
CACCTTATTGTGCATCCAAA+TGG | 0.401520 | 4.2:+39657368 | MS.gene003925:CDS |
ACAGGGATCGAAATGGGAAT+TGG | 0.404652 | 4.2:+39656866 | MS.gene003925:CDS |
GTTGGTAGTGGCAGTGAGAA+AGG | 0.412992 | 4.2:+39656836 | MS.gene003925:CDS |
ATCACGGGAACATCCGATAA+TGG | 0.418389 | 4.2:-39656987 | None:intergenic |
TCTTCTGGTTGGGGAAGATC+AGG | 0.419311 | 4.2:+39657331 | MS.gene003925:CDS |
GAGGCACTTCATTCCTCTGA+TGG | 0.420110 | 4.2:+39657264 | MS.gene003925:CDS |
AGTGAGAAAGGTAGAGGTAC+AGG | 0.431670 | 4.2:+39656848 | MS.gene003925:CDS |
AAGGGCTCTAGCAATTGAAT+TGG | 0.442011 | 4.2:+39656949 | MS.gene003925:CDS |
TTTATCAATCCCCAGAATCA+TGG | 0.444345 | 4.2:+39657515 | MS.gene003925:CDS |
AATCGCGGCCACACCATTAT+CGG | 0.456442 | 4.2:+39656974 | MS.gene003925:CDS |
TCCAAGAACAAGAATGAAAT+GGG | 0.457189 | 4.2:+39657289 | MS.gene003925:CDS |
ATCCCCAGAATCATGGGCTT+CGG | 0.464636 | 4.2:+39657522 | MS.gene003925:CDS |
GCCACCACCGCCATTCCTTT+AGG | 0.464900 | 4.2:-39657430 | None:intergenic |
GACATGCTTGCTTCATGCTA+TGG | 0.471703 | 4.2:+39657478 | MS.gene003925:CDS |
AATCGAACAGTGATGATAAC+TGG | 0.474119 | 4.2:+39656908 | MS.gene003925:CDS |
ACCTTATTGTGCATCCAAAT+GGG | 0.481113 | 4.2:+39657369 | MS.gene003925:CDS |
CAATTGCTAGAGCCCTTCCT+AGG | 0.487075 | 4.2:-39656943 | None:intergenic |
GCCTAAAGGAATGGCGGTGG+TGG | 0.488412 | 4.2:+39657429 | MS.gene003925:CDS |
TAGAGGTACAGGGATCGAAA+TGG | 0.496113 | 4.2:+39656859 | MS.gene003925:CDS |
ATCGAAATGGGAATTGGAAT+AGG | 0.499510 | 4.2:+39656872 | MS.gene003925:CDS |
AGAGGTACAGGGATCGAAAT+GGG | 0.511676 | 4.2:+39656860 | MS.gene003925:CDS |
TTATCAATCCCCAGAATCAT+GGG | 0.513090 | 4.2:+39657516 | MS.gene003925:CDS |
GCATCCAAATGGGCAATTGA+AGG | 0.518913 | 4.2:+39657379 | MS.gene003925:CDS |
GCGGTGGTGGCACTCAATCC+AGG | 0.519784 | 4.2:+39657442 | MS.gene003925:CDS |
CAATTACAGCGTTGAAGAGA+TGG | 0.523871 | 4.2:+39657090 | MS.gene003925:CDS |
GTGAACATGTCTTCTGGTTG+GGG | 0.524566 | 4.2:+39657322 | MS.gene003925:CDS |
AATATATGATGATTGGTGTT+GGG | 0.528355 | 4.2:-39657046 | None:intergenic |
GAATATATGATGATTGGTGT+TGG | 0.537619 | 4.2:-39657047 | None:intergenic |
ATAATTGGATTGGAGATGGT+TGG | 0.538248 | 4.2:+39656818 | None:intergenic |
AGTGGCAGTGAGAAAGGTAG+AGG | 0.542967 | 4.2:+39656842 | MS.gene003925:CDS |
ATGTCAGTGTTGATGACTCC+TGG | 0.543360 | 4.2:-39657460 | None:intergenic |
GCTGATGAATATATGATGAT+TGG | 0.544797 | 4.2:-39657053 | None:intergenic |
TGAAGAGTTTGAGTCGGTGA+TGG | 0.545928 | 4.2:+39657210 | MS.gene003925:CDS |
GATGATAACTGGTGTTAGCA+AGG | 0.549991 | 4.2:+39656919 | MS.gene003925:CDS |
TAGTGAACATGTCTTCTGGT+TGG | 0.550146 | 4.2:+39657320 | MS.gene003925:CDS |
ACTGGTGTTAGCAAGGGCCT+AGG | 0.550702 | 4.2:+39656926 | MS.gene003925:CDS |
GTGTTAGCAAGGGCCTAGGA+AGG | 0.552217 | 4.2:+39656930 | MS.gene003925:CDS |
CGAGCTTATTATCATGATCA+CGG | 0.556603 | 4.2:-39657003 | None:intergenic |
AAGTGTAAGATTGAGTATCT+TGG | 0.558491 | 4.2:-39657554 | None:intergenic |
TGTTGGGAAGTTGAGATTGA+AGG | 0.563538 | 4.2:-39657030 | None:intergenic |
ATTGGCAGTACCTTTCAAGT+TGG | 0.566483 | 4.2:-39657236 | None:intergenic |
AAATGGGAATTGGAATAGGA+AGG | 0.568891 | 4.2:+39656876 | MS.gene003925:CDS |
CCCAGAATCATGGGCTTCGG+AGG | 0.572981 | 4.2:+39657525 | MS.gene003925:CDS |
GATATTATAGTGAACGGTGT+TGG | 0.574767 | 4.2:+39657148 | MS.gene003925:CDS |
CACCGACTCAAACTCTTCAG+AGG | 0.574771 | 4.2:-39657206 | None:intergenic |
GTTGCTGAAGAGTTGCCTAA+AGG | 0.577379 | 4.2:+39657415 | MS.gene003925:CDS |
AATCTTACACTTGCAAACAA+TGG | 0.582844 | 4.2:+39657565 | MS.gene003925:CDS |
GTGATGGATACCAACTTGAA+AGG | 0.588454 | 4.2:+39657226 | MS.gene003925:CDS |
ATTGGAATAGGAAGGAGTGA+TGG | 0.590882 | 4.2:+39656884 | MS.gene003925:CDS |
GAGCTTATTATCATGATCAC+GGG | 0.591570 | 4.2:-39657002 | None:intergenic |
CTCCGAAGCCCATGATTCTG+GGG | 0.593057 | 4.2:-39657524 | None:intergenic |
GGATTGGAGATGGTTGGTAG+TGG | 0.596007 | 4.2:+39656824 | None:intergenic |
ACCGACTCAAACTCTTCAGA+GGG | 0.596079 | 4.2:-39657205 | None:intergenic |
ATGATAACTGGTGTTAGCAA+GGG | 0.608228 | 4.2:+39656920 | MS.gene003925:CDS |
TAACAAGAACAGTAAGATGT+GGG | 0.608572 | 4.2:+39657177 | MS.gene003925:CDS |
TCCCTCTGAAGAGTTTGAGT+CGG | 0.610106 | 4.2:+39657204 | MS.gene003925:CDS |
TGAAGAGTTGCCTAAAGGAA+TGG | 0.610138 | 4.2:+39657420 | MS.gene003925:CDS |
TTAACAAGAACAGTAAGATG+TGG | 0.610296 | 4.2:+39657176 | MS.gene003925:CDS |
CCTCCAGATATTATAGTGAA+CGG | 0.613480 | 4.2:+39657142 | MS.gene003925:CDS |
AGAACAAGAATGAAATGGGA+GGG | 0.613592 | 4.2:+39657293 | MS.gene003925:CDS |
AATGAAGTGCCTCAACACAT+TGG | 0.620714 | 4.2:-39657254 | None:intergenic |
AAGAACAAGAATGAAATGGG+AGG | 0.621024 | 4.2:+39657292 | MS.gene003925:CDS |
GTGAGAAAGGTAGAGGTACA+GGG | 0.626039 | 4.2:+39656849 | MS.gene003925:CDS |
TTGTTCTTGGAAACCATCAG+AGG | 0.626482 | 4.2:-39657277 | None:intergenic |
TGTTAGCAAGGGCCTAGGAA+GGG | 0.628655 | 4.2:+39656931 | MS.gene003925:CDS |
GTTGCCTAAAGGAATGGCGG+TGG | 0.632507 | 4.2:+39657426 | MS.gene003925:CDS |
TGTAAGATTGAGTATCTTGG+TGG | 0.642521 | 4.2:-39657551 | None:intergenic |
GCAATTGAATTGGCTAATCG+CGG | 0.648945 | 4.2:+39656959 | MS.gene003925:CDS |
TGGGGATTGATAAAGAGATG+AGG | 0.653991 | 4.2:-39657506 | None:intergenic |
GGGAACATCCGATAATGGTG+TGG | 0.674398 | 4.2:-39656982 | None:intergenic |
CCGTTCACTATAATATCTGG+AGG | 0.676428 | 4.2:-39657142 | None:intergenic |
CAAGAACAGTAAGATGTGGG+AGG | 0.687539 | 4.2:+39657180 | MS.gene003925:CDS |
AGAGTTGCCTAAAGGAATGG+CGG | 0.705144 | 4.2:+39657423 | MS.gene003925:CDS |
AAGGTACTGCCAATGTGTTG+AGG | 0.753722 | 4.2:+39657245 | MS.gene003925:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATATATGATGATTGGTGTT+GGG | - | chr4.2:39657049-39657068 | None:intergenic | 25.0% |
AAGTGTAAGATTGAGTATCT+TGG | - | chr4.2:39657557-39657576 | None:intergenic | 30.0% | |
AATCTTACACTTGCAAACAA+TGG | + | chr4.2:39657565-39657584 | MS.gene003925:CDS | 30.0% | |
ATAATAGTGAACATGTCTTC+TGG | + | chr4.2:39657316-39657335 | MS.gene003925:CDS | 30.0% | |
ATTGTTATGGAGAAAAAAGG+AGG | + | chr4.2:39657118-39657137 | MS.gene003925:CDS | 30.0% | |
GAATATATGATGATTGGTGT+TGG | - | chr4.2:39657050-39657069 | None:intergenic | 30.0% | |
GCTGATGAATATATGATGAT+TGG | - | chr4.2:39657056-39657075 | None:intergenic | 30.0% | |
TAACAAGAACAGTAAGATGT+GGG | + | chr4.2:39657177-39657196 | MS.gene003925:CDS | 30.0% | |
TCCAAGAACAAGAATGAAAT+GGG | + | chr4.2:39657289-39657308 | MS.gene003925:CDS | 30.0% | |
TTAACAAGAACAGTAAGATG+TGG | + | chr4.2:39657176-39657195 | MS.gene003925:CDS | 30.0% | |
TTCCAAGAACAAGAATGAAA+TGG | + | chr4.2:39657288-39657307 | MS.gene003925:CDS | 30.0% | |
AAATGGGAATTGGAATAGGA+AGG | + | chr4.2:39656876-39656895 | MS.gene003925:CDS | 35.0% | |
AAGAACAAGAATGAAATGGG+AGG | + | chr4.2:39657292-39657311 | MS.gene003925:CDS | 35.0% | |
AATCGAACAGTGATGATAAC+TGG | + | chr4.2:39656908-39656927 | MS.gene003925:CDS | 35.0% | |
ACACCGTTCACTATAATATC+TGG | - | chr4.2:39657148-39657167 | None:intergenic | 35.0% | |
ACCTTATTGTGCATCCAAAT+GGG | + | chr4.2:39657369-39657388 | MS.gene003925:CDS | 35.0% | |
AGAACAAGAATGAAATGGGA+GGG | + | chr4.2:39657293-39657312 | MS.gene003925:CDS | 35.0% | |
ATCGAAATGGGAATTGGAAT+AGG | + | chr4.2:39656872-39656891 | MS.gene003925:CDS | 35.0% | |
CCTCCAGATATTATAGTGAA+CGG | + | chr4.2:39657142-39657161 | MS.gene003925:CDS | 35.0% | |
CGAGCTTATTATCATGATCA+CGG | - | chr4.2:39657006-39657025 | None:intergenic | 35.0% | |
CGCATTGTTATGGAGAAAAA+AGG | + | chr4.2:39657115-39657134 | MS.gene003925:CDS | 35.0% | |
GAGCTTATTATCATGATCAC+GGG | - | chr4.2:39657005-39657024 | None:intergenic | 35.0% | |
GATATTATAGTGAACGGTGT+TGG | + | chr4.2:39657148-39657167 | MS.gene003925:CDS | 35.0% | |
TCCCATTTCATTCTTGTTCT+TGG | - | chr4.2:39657293-39657312 | None:intergenic | 35.0% | |
TGTAAGATTGAGTATCTTGG+TGG | - | chr4.2:39657554-39657573 | None:intergenic | 35.0% | |
TTATCAATCCCCAGAATCAT+GGG | + | chr4.2:39657516-39657535 | MS.gene003925:CDS | 35.0% | |
TTTATCAATCCCCAGAATCA+TGG | + | chr4.2:39657515-39657534 | MS.gene003925:CDS | 35.0% | |
! | ATGATAACTGGTGTTAGCAA+GGG | + | chr4.2:39656920-39656939 | MS.gene003925:CDS | 35.0% |
!! | TATTCATCAGCGTTGATGTT+AGG | + | chr4.2:39657065-39657084 | MS.gene003925:CDS | 35.0% |
ATTGGAATAGGAAGGAGTGA+TGG | + | chr4.2:39656884-39656903 | MS.gene003925:CDS | 40.0% | |
CACCTTATTGTGCATCCAAA+TGG | + | chr4.2:39657368-39657387 | MS.gene003925:CDS | 40.0% | |
CCGTTCACTATAATATCTGG+AGG | - | chr4.2:39657145-39657164 | None:intergenic | 40.0% | |
GCAATTGAATTGGCTAATCG+CGG | + | chr4.2:39656959-39656978 | MS.gene003925:CDS | 40.0% | |
TAGTGAACATGTCTTCTGGT+TGG | + | chr4.2:39657320-39657339 | MS.gene003925:CDS | 40.0% | |
TGAAGAGTTGCCTAAAGGAA+TGG | + | chr4.2:39657420-39657439 | MS.gene003925:CDS | 40.0% | |
TGGGGATTGATAAAGAGATG+AGG | - | chr4.2:39657509-39657528 | None:intergenic | 40.0% | |
TGTTGGGAAGTTGAGATTGA+AGG | - | chr4.2:39657033-39657052 | None:intergenic | 40.0% | |
TTGTTCTTGGAAACCATCAG+AGG | - | chr4.2:39657280-39657299 | None:intergenic | 40.0% | |
! | AAGGGCTCTAGCAATTGAAT+TGG | + | chr4.2:39656949-39656968 | MS.gene003925:CDS | 40.0% |
! | AATGAAGTGCCTCAACACAT+TGG | - | chr4.2:39657257-39657276 | None:intergenic | 40.0% |
! | AGTGAACATGTCTTCTGGTT+GGG | + | chr4.2:39657321-39657340 | MS.gene003925:CDS | 40.0% |
! | ATTGGCAGTACCTTTCAAGT+TGG | - | chr4.2:39657239-39657258 | None:intergenic | 40.0% |
! | CAATTACAGCGTTGAAGAGA+TGG | + | chr4.2:39657090-39657109 | MS.gene003925:CDS | 40.0% |
! | GATGATAACTGGTGTTAGCA+AGG | + | chr4.2:39656919-39656938 | MS.gene003925:CDS | 40.0% |
!! | GTGATGGATACCAACTTGAA+AGG | + | chr4.2:39657226-39657245 | MS.gene003925:CDS | 40.0% |
ACAGGGATCGAAATGGGAAT+TGG | + | chr4.2:39656866-39656885 | MS.gene003925:CDS | 45.0% | |
AGAGATGGCACGCATTGTTA+TGG | + | chr4.2:39657105-39657124 | MS.gene003925:CDS | 45.0% | |
AGAGTTGCCTAAAGGAATGG+CGG | + | chr4.2:39657423-39657442 | MS.gene003925:CDS | 45.0% | |
ATCACGGGAACATCCGATAA+TGG | - | chr4.2:39656990-39657009 | None:intergenic | 45.0% | |
CAAGAACAGTAAGATGTGGG+AGG | + | chr4.2:39657180-39657199 | MS.gene003925:CDS | 45.0% | |
GACATGCTTGCTTCATGCTA+TGG | + | chr4.2:39657478-39657497 | MS.gene003925:CDS | 45.0% | |
GAGTCCTTCAATTGCCCATT+TGG | - | chr4.2:39657386-39657405 | None:intergenic | 45.0% | |
GCATCCAAATGGGCAATTGA+AGG | + | chr4.2:39657379-39657398 | MS.gene003925:CDS | 45.0% | |
GCCCATTTGGATGCACAATA+AGG | - | chr4.2:39657373-39657392 | None:intergenic | 45.0% | |
GTTGCTGAAGAGTTGCCTAA+AGG | + | chr4.2:39657415-39657434 | MS.gene003925:CDS | 45.0% | |
TGAAGAGTTTGAGTCGGTGA+TGG | + | chr4.2:39657210-39657229 | MS.gene003925:CDS | 45.0% | |
! | ACCGACTCAAACTCTTCAGA+GGG | - | chr4.2:39657208-39657227 | None:intergenic | 45.0% |
! | AGAGGTACAGGGATCGAAAT+GGG | + | chr4.2:39656860-39656879 | MS.gene003925:CDS | 45.0% |
! | AGTGAGAAAGGTAGAGGTAC+AGG | + | chr4.2:39656848-39656867 | MS.gene003925:CDS | 45.0% |
! | GTGAACATGTCTTCTGGTTG+GGG | + | chr4.2:39657322-39657341 | MS.gene003925:CDS | 45.0% |
! | GTGAGAAAGGTAGAGGTACA+GGG | + | chr4.2:39656849-39656868 | MS.gene003925:CDS | 45.0% |
! | TAGAGGTACAGGGATCGAAA+TGG | + | chr4.2:39656859-39656878 | MS.gene003925:CDS | 45.0% |
! | TCCCTCTGAAGAGTTTGAGT+CGG | + | chr4.2:39657204-39657223 | MS.gene003925:CDS | 45.0% |
!! | AAGGTACTGCCAATGTGTTG+AGG | + | chr4.2:39657245-39657264 | MS.gene003925:CDS | 45.0% |
!! | ATGTCAGTGTTGATGACTCC+TGG | - | chr4.2:39657463-39657482 | None:intergenic | 45.0% |
AATCGCGGCCACACCATTAT+CGG | + | chr4.2:39656974-39656993 | MS.gene003925:CDS | 50.0% | |
AGTGGCAGTGAGAAAGGTAG+AGG | + | chr4.2:39656842-39656861 | MS.gene003925:CDS | 50.0% | |
ATCCCCAGAATCATGGGCTT+CGG | + | chr4.2:39657522-39657541 | MS.gene003925:CDS | 50.0% | |
CAATTGCTAGAGCCCTTCCT+AGG | - | chr4.2:39656946-39656965 | None:intergenic | 50.0% | |
TGTTAGCAAGGGCCTAGGAA+GGG | + | chr4.2:39656931-39656950 | MS.gene003925:CDS | 50.0% | |
! | GAGGCACTTCATTCCTCTGA+TGG | + | chr4.2:39657264-39657283 | MS.gene003925:CDS | 50.0% |
! | GGGAACATCCGATAATGGTG+TGG | - | chr4.2:39656985-39657004 | None:intergenic | 50.0% |
! | TCTTCTGGTTGGGGAAGATC+AGG | + | chr4.2:39657331-39657350 | MS.gene003925:CDS | 50.0% |
!! | CACCGACTCAAACTCTTCAG+AGG | - | chr4.2:39657209-39657228 | None:intergenic | 50.0% |
!! | GTTGGTAGTGGCAGTGAGAA+AGG | + | chr4.2:39656836-39656855 | MS.gene003925:CDS | 50.0% |
CCTCCGAAGCCCATGATTCT+GGG | - | chr4.2:39657528-39657547 | None:intergenic | 55.0% | |
CTCCGAAGCCCATGATTCTG+GGG | - | chr4.2:39657527-39657546 | None:intergenic | 55.0% | |
GTGTTAGCAAGGGCCTAGGA+AGG | + | chr4.2:39656930-39656949 | MS.gene003925:CDS | 55.0% | |
GTTGCCTAAAGGAATGGCGG+TGG | + | chr4.2:39657426-39657445 | MS.gene003925:CDS | 55.0% | |
! | ACTGGTGTTAGCAAGGGCCT+AGG | + | chr4.2:39656926-39656945 | MS.gene003925:CDS | 55.0% |
CCCAGAATCATGGGCTTCGG+AGG | + | chr4.2:39657525-39657544 | MS.gene003925:CDS | 60.0% | |
GCCACCACCGCCATTCCTTT+AGG | - | chr4.2:39657433-39657452 | None:intergenic | 60.0% | |
GCCTAAAGGAATGGCGGTGG+TGG | + | chr4.2:39657429-39657448 | MS.gene003925:CDS | 60.0% | |
GCCTCCGAAGCCCATGATTC+TGG | - | chr4.2:39657529-39657548 | None:intergenic | 60.0% | |
! | GCGGTGGTGGCACTCAATCC+AGG | + | chr4.2:39657442-39657461 | MS.gene003925:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 39656833 | 39657606 | 39656833 | ID=MS.gene003925 |
chr4.2 | mRNA | 39656833 | 39657606 | 39656833 | ID=MS.gene003925.t1;Parent=MS.gene003925 |
chr4.2 | exon | 39656833 | 39657606 | 39656833 | ID=MS.gene003925.t1.exon1;Parent=MS.gene003925.t1 |
chr4.2 | CDS | 39656833 | 39657606 | 39656833 | ID=cds.MS.gene003925.t1;Parent=MS.gene003925.t1 |
Gene Sequence |
Protein sequence |