AlfalfaGEDB | MS.gene43481

M. sativa cultivar XinJiangDaYe / MS.gene43481

KEGG: -
GO: GO:0003674 GO:0003824 GO:0016491
PFAM: PF00106.28

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene43481.t1	XP_013458718.1	97	236	7	0	1	236	1	236	1.20E-123	452.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene43481.t1	Q9SY73	70.6	228	63	3	9	236	18	241	1.6e-86	320.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene43481.t1	A0A072V3L6	97.0	236	7	0	1	236	1	236	8.3e-124	452.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene055846	MS.gene43481	PPI
MS.gene050431	MS.gene43481	PPI
MS.gene050131	MS.gene43481	PPI
MS.gene63403	MS.gene43481	PPI
MS.gene019786	MS.gene43481	PPI
MS.gene043387	MS.gene43481	PPI
MS.gene25667	MS.gene43481	PPI
MS.gene85724	MS.gene43481	PPI
MS.gene31507	MS.gene43481	PPI
MS.gene41122	MS.gene43481	PPI
MS.gene073684	MS.gene43481	PPI
MS.gene63308	MS.gene43481	PPI
MS.gene80360	MS.gene43481	PPI
MS.gene033685	MS.gene43481	PPI
MS.gene008153	MS.gene43481	PPI
MS.gene23019	MS.gene43481	PPI
MS.gene014425	MS.gene43481	PPI
MS.gene63482	MS.gene43481	PPI
MS.gene007002	MS.gene43481	PPI
MS.gene018066	MS.gene43481	PPI
MS.gene28848	MS.gene43481	PPI
MS.gene87026	MS.gene43481	PPI
MS.gene62193	MS.gene43481	PPI
MS.gene30551	MS.gene43481	PPI
MS.gene003992	MS.gene43481	PPI
MS.gene07096	MS.gene43481	PPI
MS.gene62195	MS.gene43481	PPI
MS.gene050432	MS.gene43481	PPI
MS.gene42260	MS.gene43481	PPI
MS.gene25674	MS.gene43481	PPI
MS.gene52742	MS.gene43481	PPI
MS.gene007006	MS.gene43481	PPI
MS.gene072664	MS.gene43481	PPI
MS.gene28847	MS.gene43481	PPI
MS.gene62194	MS.gene43481	PPI
MS.gene63307	MS.gene43481	PPI
MS.gene87780	MS.gene43481	PPI
MS.gene63484	MS.gene43481	PPI
MS.gene008162	MS.gene43481	PPI
MS.gene028938	MS.gene43481	PPI
MS.gene03319	MS.gene43481	PPI
MS.gene50524	MS.gene43481	PPI
MS.gene08694	MS.gene43481	PPI
MS.gene064756	MS.gene43481	PPI
MS.gene42856	MS.gene43481	PPI
MS.gene43481	MS.gene003992	PPI
MS.gene43481	MS.gene30551	PPI
MS.gene52743	MS.gene43481	PPI
MS.gene008161	MS.gene43481	PPI
MS.gene50522	MS.gene43481	PPI
MS.gene08756	MS.gene43481	PPI
MS.gene007678	MS.gene43481	PPI
MS.gene07097	MS.gene43481	PPI
MS.gene08695	MS.gene43481	PPI
MS.gene63306	MS.gene43481	PPI
MS.gene62187	MS.gene43481	PPI
MS.gene63300	MS.gene43481	PPI
MS.gene42114	MS.gene43481	PPI
MS.gene006999	MS.gene43481	PPI
MS.gene021164	MS.gene43481	PPI
MS.gene008160	MS.gene43481	PPI
MS.gene63483	MS.gene43481	PPI
MS.gene04700	MS.gene43481	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene43481.t1	MTR_4g134660	97.034	236	7	0	1	236	1	236	7.37e-169	465
MS.gene43481.t1	MTR_4g066050	79.747	237	44	3	3	236	21	256	5.47e-133	375
MS.gene43481.t1	MTR_4g070490	72.152	237	62	3	3	236	21	256	5.97e-118	337
MS.gene43481.t1	MTR_4g070500	60.944	233	52	2	4	236	22	215	1.02e-91	269
MS.gene43481.t1	MTR_3g085740	32.461	191	123	5	11	199	80	266	4.23e-18	82.0
MS.gene43481.t1	MTR_7g094510	30.097	206	121	7	6	198	6	201	7.24e-15	72.0
MS.gene43481.t1	MTR_3g068085	31.953	169	112	2	10	178	19	184	7.94e-15	72.4
MS.gene43481.t1	MTR_7g080410	30.159	189	122	5	13	195	45	229	8.01e-15	72.8
MS.gene43481.t1	MTR_7g080410	30.159	189	122	5	13	195	45	229	1.16e-14	72.4
MS.gene43481.t1	MTR_4g131740	27.979	193	127	4	9	193	43	231	3.06e-14	70.9
MS.gene43481.t1	MTR_7g071680	30.348	201	126	7	4	198	27	219	3.83e-14	70.9
MS.gene43481.t1	MTR_8g044240	31.658	199	124	8	11	200	74	269	1.17e-13	69.7
MS.gene43481.t1	MTR_7g063320	29.016	193	133	3	9	200	18	207	1.93e-13	68.2
MS.gene43481.t1	MTR_3g068070	30.769	169	114	2	10	178	19	184	3.46e-13	67.8
MS.gene43481.t1	MTR_7g063330	28.646	192	133	3	10	200	19	207	1.33e-12	65.9
MS.gene43481.t1	MTR_7g105590	28.934	197	131	7	3	196	5	195	2.93e-12	63.9
MS.gene43481.t1	MTR_4g058840	27.861	201	137	6	6	200	11	209	5.54e-12	64.3
MS.gene43481.t1	MTR_4g058820	27.861	201	137	6	6	200	11	209	5.54e-12	64.3
MS.gene43481.t1	MTR_4g097510	30.208	192	119	7	11	197	7	188	9.70e-12	63.5
MS.gene43481.t1	MTR_4g064887	28.272	191	133	3	10	199	19	206	1.42e-11	62.4
MS.gene43481.t1	MTR_4g064887	28.272	191	133	3	10	199	19	206	1.81e-11	62.8
MS.gene43481.t1	MTR_1196s0010	30.457	197	116	8	8	196	276	459	2.07e-11	63.5
MS.gene43481.t1	MTR_7g083870	29.907	214	130	7	1	210	30	227	3.32e-11	62.4
MS.gene43481.t1	MTR_4g058810	26.866	201	139	6	6	200	11	209	3.52e-11	62.0
MS.gene43481.t1	MTR_6g023590	25.481	208	149	6	12	216	19	223	3.53e-11	62.0
MS.gene43481.t1	MTR_4g052320	27.477	222	148	7	12	230	14	225	5.35e-11	61.6
MS.gene43481.t1	MTR_4g064883	30.256	195	122	6	10	198	18	204	6.31e-11	60.5
MS.gene43481.t1	MTR_4g064883	30.256	195	122	6	10	198	18	204	8.64e-11	60.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene43481.t1	AT1G10310	70.614	228	63	3	9	236	18	241	4.11e-116	332
MS.gene43481.t1	AT5G10050	30.342	234	141	10	11	233	10	232	1.90e-16	77.0
MS.gene43481.t1	AT5G65205	31.220	205	118	8	1	197	1	190	5.38e-16	75.9
MS.gene43481.t1	AT1G63380	29.524	210	127	8	6	202	22	223	5.90e-16	75.9
MS.gene43481.t1	AT1G63380	29.524	210	127	8	6	202	15	216	6.78e-16	75.5
MS.gene43481.t1	AT1G63380	29.524	210	127	8	6	202	19	220	6.82e-16	75.5
MS.gene43481.t1	AT1G63380	29.524	210	127	8	6	202	17	218	7.98e-16	75.5
MS.gene43481.t1	AT2G17845	30.151	199	132	4	6	197	47	245	1.71e-15	74.7
MS.gene43481.t1	AT5G18210	29.064	203	130	7	6	198	8	206	2.21e-15	73.9
MS.gene43481.t1	AT1G62610	29.048	210	128	8	6	202	13	214	2.56e-15	73.9
MS.gene43481.t1	AT1G62610	29.048	210	128	8	6	202	14	215	2.75e-15	73.6
MS.gene43481.t1	AT5G18210	29.064	203	130	7	6	198	8	206	2.81e-15	73.6
MS.gene43481.t1	AT1G62610	29.048	210	128	8	6	202	15	216	2.87e-15	73.6
MS.gene43481.t1	AT1G62610	29.048	210	128	8	6	202	19	220	3.18e-15	73.6
MS.gene43481.t1	AT3G55290	30.000	200	128	5	6	197	17	212	3.73e-14	70.5
MS.gene43481.t1	AT3G55290	30.000	200	128	5	6	197	18	213	4.04e-14	70.5
MS.gene43481.t1	AT3G55310	30.348	201	126	7	6	197	17	212	7.22e-14	69.7
MS.gene43481.t1	AT5G19200	30.270	185	120	6	9	190	38	216	3.71e-13	68.2
MS.gene43481.t1	AT3G51680	29.851	201	133	5	4	198	30	228	6.29e-13	67.4
MS.gene43481.t1	AT1G24360	28.125	192	132	5	11	200	79	266	7.54e-13	67.4
MS.gene43481.t1	AT3G46170	28.934	197	134	4	6	197	26	221	2.55e-12	65.5
MS.gene43481.t1	AT5G04900	29.798	198	128	7	11	200	82	276	3.35e-12	65.5
MS.gene43481.t1	AT3G47360	27.411	197	134	5	4	197	43	233	1.15e-11	63.9
MS.gene43481.t1	AT1G07440	26.667	195	139	3	9	202	15	206	1.24e-11	63.2
MS.gene43481.t1	AT5G50690	31.100	209	116	9	9	202	48	243	1.48e-11	62.8
MS.gene43481.t1	AT5G50590	31.100	209	116	9	9	202	48	243	1.48e-11	62.8
MS.gene43481.t1	AT3G26760	30.244	205	128	7	4	202	34	229	1.91e-11	63.2
MS.gene43481.t1	AT5G06060	29.545	176	115	4	6	178	9	178	4.54e-11	61.6
MS.gene43481.t1	AT1G24470	29.646	226	134	10	12	223	56	270	6.29e-11	61.6
MS.gene43481.t1	AT5G50600	29.592	196	121	7	9	197	48	233	6.63e-11	61.6
MS.gene43481.t1	AT5G50700	29.592	196	121	7	9	197	48	233	6.63e-11	61.6

Find 72 sgRNAs with CRISPR-Local

Find 72 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CATCTTGTTGTTCTTGTTAA+TGG	0.155577	8.4:+220311	None:intergenic
AAGAGATGATTATGATTATT+GGG	0.229320	8.4:+220438	None:intergenic
GAAGAGATGATTATGATTAT+TGG	0.247683	8.4:+220437	None:intergenic
GACATGCTTGCTTCTTGCTT+TGG	0.296337	8.4:-220012	MS.gene43481:CDS
AGTTAACTTGTCTTCTGGTT+GGG	0.316946	8.4:-220169	MS.gene43481:CDS
ATTATAGTTAACTTGTCTTC+TGG	0.326492	8.4:-220174	MS.gene43481:CDS
CTCCTTACTGTGCATCCAAA+TGG	0.350241	8.4:-220122	MS.gene43481:CDS
AATCGAGGTCACACCATTAT+AGG	0.357867	8.4:-220510	MS.gene43481:CDS
ACAGATGGCTCGCGCTGTTA+TGG	0.369822	8.4:-220379	MS.gene43481:CDS
TCTTCTGGTTGGGGAAGATC+AGG	0.385658	8.4:-220159	MS.gene43481:CDS
TCCCTCCCAAGAGTTTGATT+TGG	0.389305	8.4:-220280	MS.gene43481:CDS
GAGTCCTTCAATAGCCCATT+TGG	0.398492	8.4:+220107	None:intergenic
TAGGGCTCTTGCTATTGAAT+TGG	0.402272	8.4:-220535	MS.gene43481:CDS
CGGAATGGGTGGGAAGGGAA+TGG	0.403700	8.4:-220601	None:intergenic
AATAGAAGTGTGTTGATTAC+TGG	0.408672	8.4:-220576	MS.gene43481:CDS
AATCTTACTCCAGCAGATAA+TGG	0.413046	8.4:-219847	MS.gene43481:CDS
AGCACGAGAACAACCTATAA+TGG	0.423172	8.4:+220497	None:intergenic
ACTGGTGTTAGCAAAGGAAT+TGG	0.432533	8.4:-220558	MS.gene43481:CDS
GGAATGGGTGGGAAGGGAAT+GGG	0.435982	8.4:-220600	MS.gene43481:CDS
CCATCACCAAATCAAACTCT+TGG	0.438227	8.4:+220274	None:intergenic
TTTATCAATCCCCTCAATCA+TGG	0.447887	8.4:-219975	MS.gene43481:intron
TATAGGTTGTTCTCGTGCTC+AGG	0.451147	8.4:-220493	MS.gene43481:CDS
AACATGATGTTTACTTGCAA+TGG	0.455403	8.4:+219742	None:intergenic
GCTGTTGTCGCACTCAATCC+TGG	0.475014	8.4:-220048	MS.gene43481:CDS
GTTAACTTGTCTTCTGGTTG+GGG	0.475108	8.4:-220168	MS.gene43481:CDS
TAGTTAACTTGTCTTCTGGT+TGG	0.476654	8.4:-220170	MS.gene43481:CDS
GGAGTCGGAATGGGTGGGAA+GGG	0.480505	8.4:-220606	None:intergenic
TCCTTACTGTGCATCCAAAT+GGG	0.481610	8.4:-220121	MS.gene43481:CDS
AGGAGTCGGAATGGGTGGGA+AGG	0.485986	8.4:-220607	None:intergenic
GTGTTAGCAAAGGAATTGGT+AGG	0.489002	8.4:-220554	MS.gene43481:CDS
CATCACCAAATCAAACTCTT+GGG	0.493519	8.4:+220275	None:intergenic
GCATCCAAATGGGCTATTGA+AGG	0.497887	8.4:-220111	MS.gene43481:CDS
CCAAGAGTTTGATTTGGTGA+TGG	0.507185	8.4:-220274	MS.gene43481:CDS
AGAGAAGCACCATTATCTGC+TGG	0.512127	8.4:+219838	None:intergenic
GTGATGGATACAAACTTGAA+AGG	0.521934	8.4:-220258	MS.gene43481:CDS
AACAAACAAACCATGATTGA+GGG	0.523875	8.4:+219965	None:intergenic
TAACAAACAAACCATGATTG+AGG	0.525432	8.4:+219964	None:intergenic
GCCCATTTGGATGCACAGTA+AGG	0.529397	8.4:+220120	None:intergenic
AGAGATGATTATGATTATTG+GGG	0.538490	8.4:+220439	None:intergenic
CGCGCTGTTATGGAGACCAA+GGG	0.544000	8.4:-220369	MS.gene43481:CDS
TGGAGCTGACGTCGACATTG+AGG	0.545855	8.4:+220415	None:intergenic
TTCCATAATCAGGGCTCTCA+AGG	0.550794	8.4:-219887	MS.gene43481:intron
TAAAGAGTTACCACAAGGAA+TGG	0.552214	8.4:-220070	MS.gene43481:CDS
CAACGACAGCGTTCAACAGA+TGG	0.559184	8.4:-220394	MS.gene43481:CDS
GCGCTGTTCACAATAACATC+AGG	0.559509	8.4:+220339	None:intergenic
ATGTCAGTGTTGATGACACC+AGG	0.567373	8.4:+220030	None:intergenic
TCGCGCTGTTATGGAGACCA+AGG	0.568599	8.4:-220370	MS.gene43481:CDS
CATCTGTTGAACGCTGTCGT+TGG	0.569321	8.4:+220395	None:intergenic
TTAACAAGAACAACAAGATG+TGG	0.570016	8.4:-220308	MS.gene43481:CDS
AAAAGAGGAGTCGGAATGGG+TGG	0.574723	8.4:-220612	None:intergenic
AAAGAGGAGTCGGAATGGGT+GGG	0.595632	8.4:-220611	None:intergenic
CGCTGTTATGGAGACCAAGG+GGG	0.598830	8.4:-220367	MS.gene43481:CDS
ACCAAATCAAACTCTTGGGA+GGG	0.599420	8.4:+220279	None:intergenic
GCTATTGAATTGGCGAATCG+AGG	0.601300	8.4:-220525	MS.gene43481:CDS
CTCATGATCAACAACAACAA+TGG	0.602640	8.4:-220204	MS.gene43481:CDS
GATGTTATTGTGAACAGCGC+AGG	0.602911	8.4:-220336	MS.gene43481:CDS
TTGTTGTTGTTGATCATGAG+AGG	0.603072	8.4:+220207	None:intergenic
CACCAAATCAAACTCTTGGG+AGG	0.606575	8.4:+220278	None:intergenic
TGTTGTTGTTGATCATGAGA+GGG	0.610244	8.4:+220208	None:intergenic
GCTGTTATGGAGACCAAGGG+GGG	0.617429	8.4:-220366	MS.gene43481:CDS
ATCAACAACAACAATGGAGA+AGG	0.620158	8.4:-220198	MS.gene43481:CDS
TGGAGTAAGATTGAGAATCA+TGG	0.623215	8.4:+219858	None:intergenic
CTGTTCACAATAACATCAGG+TGG	0.624734	8.4:+220342	None:intergenic
TTGATTACTGGTGTTAGCAA+AGG	0.625224	8.4:-220564	MS.gene43481:CDS
GATGAAATGTCTCAACACAT+TGG	0.632609	8.4:+220230	None:intergenic
GCGCTGTTATGGAGACCAAG+GGG	0.637285	8.4:-220368	MS.gene43481:CDS
TAACAAGAACAACAAGATGT+GGG	0.638628	8.4:-220307	MS.gene43481:CDS
TGTTAGCAAAGGAATTGGTA+GGG	0.642718	8.4:-220553	MS.gene43481:CDS
ACAAACAAACCATGATTGAG+GGG	0.655381	8.4:+219966	None:intergenic
GCGACAACAGCCATTCCTTG+TGG	0.658566	8.4:+220060	None:intergenic
GTAGCTAAAGAGTTACCACA+AGG	0.726588	8.4:-220075	MS.gene43481:CDS
AGTAAGATTGAGAATCATGG+TGG	0.814994	8.4:+219861	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TAATAATAATTCCATAATCA+GGG	-	chr8.4:220453-220472	MS.gene43481:CDS	15.0%
!!	AAGAGATGATTATGATTATT+GGG	+	chr8.4:219914-219933	None:intergenic	20.0%
!!	CTAATAATAATTCCATAATC+AGG	-	chr8.4:220452-220471	MS.gene43481:CDS	20.0%
!	AGAGATGATTATGATTATTG+GGG	+	chr8.4:219913-219932	None:intergenic	25.0%
!	CTATTAGTACATCTTATCAT+AGG	-	chr8.4:220577-220596	MS.gene43481:CDS	25.0%
!	GAAGAGATGATTATGATTAT+TGG	+	chr8.4:219915-219934	None:intergenic	25.0%
!	GAATGAAAGAATAGTAAACA+AGG	+	chr8.4:220414-220433	None:intergenic	25.0%
!!!	ATTATAGTTAACTTGTCTTC+TGG	-	chr8.4:220175-220194	MS.gene43481:CDS	25.0%
	AACAAACAAACCATGATTGA+GGG	+	chr8.4:220387-220406	None:intergenic	30.0%
	TAACAAACAAACCATGATTG+AGG	+	chr8.4:220388-220407	None:intergenic	30.0%
	TAACAAGAACAACAAGATGT+GGG	-	chr8.4:220042-220061	MS.gene43481:CDS	30.0%
	TTAACAAGAACAACAAGATG+TGG	-	chr8.4:220041-220060	MS.gene43481:CDS	30.0%
!!	AATAGAAGTGTGTTGATTAC+TGG	-	chr8.4:219773-219792	MS.gene43481:intron	30.0%
!!	CATCTTGTTGTTCTTGTTAA+TGG	+	chr8.4:220041-220060	None:intergenic	30.0%
	AATCTTACTCCAGCAGATAA+TGG	-	chr8.4:220502-220521	MS.gene43481:CDS	35.0%
	ACAAACAAACCATGATTGAG+GGG	+	chr8.4:220386-220405	None:intergenic	35.0%
	AGTAAGATTGAGAATCATGG+TGG	+	chr8.4:220491-220510	None:intergenic	35.0%
	ATCAACAACAACAATGGAGA+AGG	-	chr8.4:220151-220170	MS.gene43481:CDS	35.0%
	CATCACCAAATCAAACTCTT+GGG	+	chr8.4:220077-220096	None:intergenic	35.0%
	CTCATGATCAACAACAACAA+TGG	-	chr8.4:220145-220164	MS.gene43481:CDS	35.0%
	GATGAAATGTCTCAACACAT+TGG	+	chr8.4:220122-220141	None:intergenic	35.0%
	TAAAGAGTTACCACAAGGAA+TGG	-	chr8.4:220279-220298	MS.gene43481:CDS	35.0%
	TGGAGTAAGATTGAGAATCA+TGG	+	chr8.4:220494-220513	None:intergenic	35.0%
	TGTTAGCAAAGGAATTGGTA+GGG	-	chr8.4:219796-219815	MS.gene43481:intron	35.0%
	TTTATCAATCCCCTCAATCA+TGG	-	chr8.4:220374-220393	MS.gene43481:CDS	35.0%
!	TGTTGTTGTTGATCATGAGA+GGG	+	chr8.4:220144-220163	None:intergenic	35.0%
!	TTGATTACTGGTGTTAGCAA+AGG	-	chr8.4:219785-219804	MS.gene43481:intron	35.0%
!	TTGTTGTTGTTGATCATGAG+AGG	+	chr8.4:220145-220164	None:intergenic	35.0%
!!	AGTTAACTTGTCTTCTGGTT+GGG	-	chr8.4:220180-220199	MS.gene43481:CDS	35.0%
!!	GTGATGGATACAAACTTGAA+AGG	-	chr8.4:220091-220110	MS.gene43481:CDS	35.0%
!!	TAGTTAACTTGTCTTCTGGT+TGG	-	chr8.4:220179-220198	MS.gene43481:CDS	35.0%
	AATCGAGGTCACACCATTAT+AGG	-	chr8.4:219839-219858	MS.gene43481:CDS	40.0%
	ACCAAATCAAACTCTTGGGA+GGG	+	chr8.4:220073-220092	None:intergenic	40.0%
	AGCACGAGAACAACCTATAA+TGG	+	chr8.4:219855-219874	None:intergenic	40.0%
	CCATCACCAAATCAAACTCT+TGG	+	chr8.4:220078-220097	None:intergenic	40.0%
	CTCACACGTAAGACTTCAAA+CGG	+	chr8.4:220539-220558	None:intergenic	40.0%
	CTGTTCACAATAACATCAGG+TGG	+	chr8.4:220010-220029	None:intergenic	40.0%
	GTAGCTAAAGAGTTACCACA+AGG	-	chr8.4:220274-220293	MS.gene43481:CDS	40.0%
	GTGTTAGCAAAGGAATTGGT+AGG	-	chr8.4:219795-219814	MS.gene43481:intron	40.0%
	TCCTTACTGTGCATCCAAAT+GGG	-	chr8.4:220228-220247	MS.gene43481:CDS	40.0%
!	ACTGGTGTTAGCAAAGGAAT+TGG	-	chr8.4:219791-219810	MS.gene43481:intron	40.0%
!!	CCAAGAGTTTGATTTGGTGA+TGG	-	chr8.4:220075-220094	MS.gene43481:CDS	40.0%
!!	GTTAACTTGTCTTCTGGTTG+GGG	-	chr8.4:220181-220200	MS.gene43481:CDS	40.0%
!!	TAGGGCTCTTGCTATTGAAT+TGG	-	chr8.4:219814-219833	MS.gene43481:intron	40.0%
	CACCAAATCAAACTCTTGGG+AGG	+	chr8.4:220074-220093	None:intergenic	45.0%
	CTCCTTACTGTGCATCCAAA+TGG	-	chr8.4:220227-220246	MS.gene43481:CDS	45.0%
	GACATGCTTGCTTCTTGCTT+TGG	-	chr8.4:220337-220356	MS.gene43481:CDS	45.0%
	GAGTCCTTCAATAGCCCATT+TGG	+	chr8.4:220245-220264	None:intergenic	45.0%
	GATGTTATTGTGAACAGCGC+AGG	-	chr8.4:220013-220032	MS.gene43481:CDS	45.0%
	GCGCTGTTCACAATAACATC+AGG	+	chr8.4:220013-220032	None:intergenic	45.0%
	GCTATTGAATTGGCGAATCG+AGG	-	chr8.4:219824-219843	MS.gene43481:intron	45.0%
	TATAGGTTGTTCTCGTGCTC+AGG	-	chr8.4:219856-219875	MS.gene43481:CDS	45.0%
	TCCCTCCCAAGAGTTTGATT+TGG	-	chr8.4:220069-220088	MS.gene43481:CDS	45.0%
	TTCCATAATCAGGGCTCTCA+AGG	-	chr8.4:220462-220481	MS.gene43481:CDS	45.0%
!!	AGAGAAGCACCATTATCTGC+TGG	+	chr8.4:220514-220533	None:intergenic	45.0%
!!	ATGTCAGTGTTGATGACACC+AGG	+	chr8.4:220322-220341	None:intergenic	45.0%
!!	GCATCCAAATGGGCTATTGA+AGG	-	chr8.4:220238-220257	MS.gene43481:CDS	45.0%
	CAACGACAGCGTTCAACAGA+TGG	-	chr8.4:219955-219974	MS.gene43481:intron	50.0%
	CATCTGTTGAACGCTGTCGT+TGG	+	chr8.4:219957-219976	None:intergenic	50.0%
	GCCCATTTGGATGCACAGTA+AGG	+	chr8.4:220232-220251	None:intergenic	50.0%
	TGCCTTGAGAGCCCTGATTA+TGG	+	chr8.4:220467-220486	None:intergenic	50.0%
!	TCTTCTGGTTGGGGAAGATC+AGG	-	chr8.4:220190-220209	MS.gene43481:CDS	50.0%
	ACAGATGGCTCGCGCTGTTA+TGG	-	chr8.4:219970-219989	MS.gene43481:intron	55.0%
	CGCGCTGTTATGGAGACCAA+GGG	-	chr8.4:219980-219999	MS.gene43481:CDS	55.0%
	CGCTGTTATGGAGACCAAGG+GGG	-	chr8.4:219982-220001	MS.gene43481:CDS	55.0%
	GCGACAACAGCCATTCCTTG+TGG	+	chr8.4:220292-220311	None:intergenic	55.0%
	GCGCTGTTATGGAGACCAAG+GGG	-	chr8.4:219981-220000	MS.gene43481:CDS	55.0%
	GCTGTTATGGAGACCAAGGG+GGG	-	chr8.4:219983-220002	MS.gene43481:CDS	55.0%
	GCTGTTGTCGCACTCAATCC+TGG	-	chr8.4:220301-220320	MS.gene43481:CDS	55.0%
	TCGCGCTGTTATGGAGACCA+AGG	-	chr8.4:219979-219998	MS.gene43481:CDS	55.0%
	TGGAGCTGACGTCGACATTG+AGG	+	chr8.4:219937-219956	None:intergenic	55.0%
	AACATCAGGTGGACCCCCCT+TGG	+	chr8.4:219999-220018	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.4	gene	219752	220619	219752	ID=MS.gene43481
chr8.4	mRNA	219752	220619	219752	ID=MS.gene43481.t1;Parent=MS.gene43481
chr8.4	exon	219976	220619	219976	ID=MS.gene43481.t1.exon1;Parent=MS.gene43481.t1
chr8.4	CDS	219976	220619	219976	ID=cds.MS.gene43481.t1;Parent=MS.gene43481.t1
chr8.4	exon	219834	219897	219834	ID=MS.gene43481.t1.exon2;Parent=MS.gene43481.t1
chr8.4	CDS	219834	219897	219834	ID=cds.MS.gene43481.t1;Parent=MS.gene43481.t1
chr8.4	exon	219752	219772	219752	ID=MS.gene43481.t1.exon3;Parent=MS.gene43481.t1
chr8.4	CDS	219752	219772	219752	ID=cds.MS.gene43481.t1;Parent=MS.gene43481.t1

Gene Sequence

>MS.gene43481

ATGGGTGGGAAGGGAATGGGAAATAGAAGTGTGTTGATTACTGGTGTTAGCAAAGGAATTGGTAGGGCTCTTGCTATTGAATTGGCGAATCGAGGTCACACCATTATAGGTTGTTCTCGTGCTCAGGATAAGCTTGATTCTCTTCAATCTCTTCTACTCCCCAATAATCATAATCATCTCTTCCTCAATGTCGACGTCAGCTCCAACGACAGCGTTCAACAGATGGCTCGCGCTGTTATGGAGACCAAGGGGGGTCCACCTGATGTTATTGTGAACAGCGCAGGTACCATTAACAAGAACAACAAGATGTGGGAAGTTCCCTCCCAAGAGTTTGATTTGGTGATGGATACAAACTTGAAAGGAACTGCCAATGTGTTGAGACATTTCATCCCTCTCATGATCAACAACAACAATGGAGAAGGTATTATAGTTAACTTGTCTTCTGGTTGGGGAAGATCAGGTGCAGCACTTGTTGCTCCTTACTGTGCATCCAAATGGGCTATTGAAGGACTCACTAAGTCTGTAGCTAAAGAGTTACCACAAGGAATGGCTGTTGTCGCACTCAATCCTGGTGTCATCAACACTGACATGCTTGCTTCTTGCTTTGGTGCTTCTGCTTCTCTTTATCAATCCCCTCAATCATGGTTTGTTTGTTACTTCCTTGTTTACTATTCTTTCATTCACATATGTTTTTGTTTTACTAATAATAATTCCATAATCAGGGCTCTCAAGGCAGCCACCATGATTCTCAATCTTACTCCAGCAGATAATGGTGCTTCTCTCTCCGTTTGAAGTCTTACGTGTGAGTAAACATCATATTTATTACTATTAGTACATCTTATCATAGGATGATTGCCATTGCAAGTAA

Protein sequence

>MS.gene43481.t1

MGGKGMGNRSVLITGVSKGIGRALAIELANRGHTIIGCSRAQDKLDSLQSLLLPNNHNHLFLNVDVSSNDSVQQMARAVMETKGGPPDVIVNSAGTINKNNKMWEVPSQEFDLVMDTNLKGTANVLRHFIPLMINNNNGEGIIVNLSSGWGRSGAALVAPYCASKWAIEGLTKSVAKELPQGMAVVALNPGVINTDMLASCFGASASLYQSPQSWALKAATMILNLTPADNGASLSDDCHCK