AlfalfaGEDB | MS.gene003926

M. sativa cultivar XinJiangDaYe / MS.gene003926

KEGG: -
GO: GO:0003674 GO:0003824 GO:0016491
PFAM: PF00106.28

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003926.t1	XP_013456232.1	84.5	258	38	2	1	257	1	257	3.20E-116	427.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003926.t1	Q9SY73	65.4	231	74	3	27	257	18	242	7.6e-82	305.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003926.t1	A0A072UMG3	84.5	258	38	2	1	257	1	257	2.3e-116	427.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene003926	MS.gene50524	PPI
MS.gene003926	MS.gene50522	PPI
MS.gene003926	MS.gene62187	PPI
MS.gene003926	MS.gene28848	PPI
MS.gene003926	MS.gene42856	PPI
MS.gene003926	MS.gene03319	PPI
MS.gene63484	MS.gene003926	PPI
MS.gene003926	MS.gene08694	PPI
MS.gene003926	MS.gene63482	PPI
MS.gene003926	MS.gene043387	PPI
MS.gene003926	MS.gene63403	PPI
MS.gene003926	MS.gene04700	PPI
MS.gene003926	MS.gene014425	PPI
MS.gene003926	MS.gene62193	PPI
MS.gene003926	MS.gene08695	PPI
MS.gene003926	MS.gene008161	PPI
MS.gene003926	MS.gene006999	PPI
MS.gene003926	MS.gene42114	PPI
MS.gene050431	MS.gene003926	PPI
MS.gene003926	MS.gene62194	PPI
MS.gene003926	MS.gene25667	PPI
MS.gene003926	MS.gene30551	PPI
MS.gene41122	MS.gene003926	PPI
MS.gene003926	MS.gene63306	PPI
MS.gene003926	MS.gene23019	PPI
MS.gene003926	MS.gene055846	PPI
MS.gene003926	MS.gene63300	PPI
MS.gene003926	MS.gene033685	PPI
MS.gene003926	MS.gene25674	PPI
MS.gene003926	MS.gene85724	PPI
MS.gene003926	MS.gene87780	PPI
MS.gene003926	MS.gene008153	PPI
MS.gene003926	MS.gene80360	PPI
MS.gene003926	MS.gene008160	PPI
MS.gene003926	MS.gene08756	PPI
MS.gene003926	MS.gene050131	PPI
MS.gene003926	MS.gene87026	PPI
MS.gene003926	MS.gene007678	PPI
MS.gene003926	MS.gene52743	PPI
MS.gene003926	MS.gene028938	PPI
MS.gene003926	MS.gene003992	PPI
MS.gene003926	MS.gene62195	PPI
MS.gene073684	MS.gene003926	PPI
MS.gene003926	MS.gene63308	PPI
MS.gene003926	MS.gene064756	PPI
MS.gene003926	MS.gene018066	PPI
MS.gene007006	MS.gene003926	PPI
MS.gene003926	MS.gene019786	PPI
MS.gene003926	MS.gene007002	PPI
MS.gene63307	MS.gene003926	PPI
MS.gene003926	MS.gene008162	PPI
MS.gene003926	MS.gene072664	PPI
MS.gene003926	MS.gene07097	PPI
MS.gene003926	MS.gene021164	PPI
MS.gene003926	MS.gene52742	PPI
MS.gene003926	MS.gene31507	PPI
MS.gene003926	MS.gene28847	PPI
MS.gene003926	MS.gene42260	PPI
MS.gene003926	MS.gene07096	PPI
MS.gene003926	MS.gene050432	PPI
MS.gene003926	MS.gene63483	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003926.t1	MTR_4g066050	85.659	258	35	2	1	257	1	257	2.30e-161	447
MS.gene003926.t1	MTR_4g070490	76.744	258	58	2	1	257	1	257	2.93e-138	389
MS.gene003926.t1	MTR_4g134660	78.903	237	48	1	21	257	3	237	3.23e-138	388
MS.gene003926.t1	MTR_4g070500	68.093	257	41	2	1	257	1	216	4.47e-104	301
MS.gene003926.t1	MTR_7g080410	31.633	196	122	5	26	215	40	229	2.80e-19	85.5
MS.gene003926.t1	MTR_7g080410	31.633	196	122	5	26	215	40	229	4.66e-19	85.1
MS.gene003926.t1	MTR_3g085740	30.808	198	129	6	29	224	80	271	1.28e-16	78.2
MS.gene003926.t1	MTR_4g131740	29.744	195	123	5	27	213	43	231	8.25e-16	75.9
MS.gene003926.t1	MTR_3g068085	31.609	174	114	2	28	201	19	187	1.71e-15	74.3
MS.gene003926.t1	MTR_3g068070	31.609	174	114	2	28	201	19	187	8.26e-15	72.4
MS.gene003926.t1	MTR_7g094510	28.141	199	132	6	26	218	8	201	2.77e-14	70.9
MS.gene003926.t1	MTR_7g071680	31.068	206	127	8	22	222	28	223	8.28e-14	70.1
MS.gene003926.t1	MTR_4g052350	32.161	199	123	7	22	217	13	202	1.02e-13	69.3
MS.gene003926.t1	MTR_8g044240	32.338	201	122	8	29	220	74	269	3.33e-13	68.6
MS.gene003926.t1	MTR_4g052300	29.902	204	131	7	22	222	7	201	3.46e-13	67.8
MS.gene003926.t1	MTR_4g058840	30.693	202	126	7	27	220	14	209	6.05e-13	67.4
MS.gene003926.t1	MTR_4g058820	30.693	202	126	7	27	220	14	209	6.05e-13	67.4
MS.gene003926.t1	MTR_4g058810	30.693	202	126	7	27	220	14	209	6.81e-13	67.0
MS.gene003926.t1	MTR_7g063320	30.500	200	123	6	27	220	18	207	1.02e-12	66.6
MS.gene003926.t1	MTR_7g063330	31.841	201	117	7	28	220	19	207	2.88e-12	65.5
MS.gene003926.t1	MTR_7g083870	30.374	214	127	7	21	230	32	227	5.05e-12	65.1
MS.gene003926.t1	MTR_3g068065	29.310	174	118	2	28	201	21	189	1.17e-11	63.5
MS.gene003926.t1	MTR_4g064887	28.497	193	132	3	28	219	19	206	1.68e-11	62.8
MS.gene003926.t1	MTR_4g064887	28.218	202	139	3	28	228	19	215	1.88e-11	63.2
MS.gene003926.t1	MTR_1196s0010	29.064	203	121	7	22	216	272	459	5.51e-11	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003926.t1	AT1G10310	67.100	231	70	3	27	257	18	242	1.32e-113	326
MS.gene003926.t1	AT5G18210	30.348	201	126	5	27	218	11	206	5.88e-17	78.6
MS.gene003926.t1	AT5G18210	30.348	201	126	5	27	218	11	206	7.89e-17	78.2
MS.gene003926.t1	AT3G51680	29.384	211	138	6	22	226	31	236	4.10e-16	76.6
MS.gene003926.t1	AT1G07440	30.151	199	133	3	27	224	15	208	4.27e-16	76.3
MS.gene003926.t1	AT2G29150	32.178	202	122	6	28	224	20	211	3.72e-15	73.6
MS.gene003926.t1	AT3G03980	28.780	205	128	7	27	218	17	216	4.73e-14	70.5
MS.gene003926.t1	AT1G67730	29.224	219	136	7	30	239	55	263	2.99e-13	68.6
MS.gene003926.t1	AT1G24360	27.461	193	132	5	29	219	79	265	3.72e-13	68.6
MS.gene003926.t1	AT3G06060	28.571	175	117	4	26	199	39	206	3.77e-13	68.6
MS.gene003926.t1	AT3G06060	28.571	175	117	4	26	199	56	223	5.01e-13	68.2
MS.gene003926.t1	AT1G63380	27.155	232	141	10	26	246	17	231	5.91e-13	67.4
MS.gene003926.t1	AT1G63380	27.155	232	141	10	26	246	24	238	5.93e-13	67.4
MS.gene003926.t1	AT2G17845	28.500	200	132	7	26	217	49	245	6.50e-13	67.8
MS.gene003926.t1	AT1G63380	27.155	232	141	10	26	246	21	235	7.51e-13	67.4
MS.gene003926.t1	AT1G63380	27.155	232	141	10	26	246	19	233	8.05e-13	67.0
MS.gene003926.t1	AT1G62610	27.586	232	140	10	26	246	15	229	8.24e-13	67.0
MS.gene003926.t1	AT1G62610	27.586	232	140	10	26	246	17	231	8.81e-13	67.0
MS.gene003926.t1	AT1G62610	27.586	232	140	10	26	246	16	230	8.99e-13	67.0
MS.gene003926.t1	AT1G62610	27.586	232	140	10	26	246	21	235	1.11e-12	66.6
MS.gene003926.t1	AT5G50690	29.412	204	128	7	27	222	48	243	1.81e-12	65.9
MS.gene003926.t1	AT5G50590	29.412	204	128	7	27	222	48	243	1.81e-12	65.9
MS.gene003926.t1	AT3G55290	29.353	201	126	8	26	217	19	212	3.42e-12	65.5
MS.gene003926.t1	AT3G55290	29.353	201	126	8	26	217	20	213	3.55e-12	65.5
MS.gene003926.t1	AT3G47360	27.228	202	124	6	25	217	46	233	3.65e-12	65.5
MS.gene003926.t1	AT1G07440	30.189	159	106	2	27	185	15	168	3.89e-12	63.5
MS.gene003926.t1	AT5G04900	30.000	200	127	7	29	220	82	276	4.50e-12	65.5
MS.gene003926.t1	AT2G29310	30.890	191	126	3	28	217	11	196	5.09e-12	63.5
MS.gene003926.t1	AT5G50690	29.851	201	125	7	27	219	48	240	6.38e-12	64.7
MS.gene003926.t1	AT5G50590	29.851	201	125	7	27	219	48	240	6.38e-12	64.7
MS.gene003926.t1	AT2G29370	31.977	172	110	3	28	198	20	185	7.64e-12	64.3
MS.gene003926.t1	AT2G29310	30.808	198	131	3	28	224	11	203	7.73e-12	63.9
MS.gene003926.t1	AT3G55310	28.358	201	128	8	26	217	19	212	9.33e-12	63.9
MS.gene003926.t1	AT2G29350	31.073	177	115	3	23	198	14	184	9.68e-12	63.2
MS.gene003926.t1	AT2G29350	31.073	177	115	3	23	198	14	184	1.01e-11	63.9
MS.gene003926.t1	AT3G04000	27.184	206	131	6	27	218	17	217	5.69e-11	61.6

Find 74 sgRNAs with CRISPR-Local

Find 79 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCTCCCTTCATTCTTGTTCT+TGG	0.142798	4.2:-39671557	None:intergenic
GCCTCCGAAGCCCATGATTC+TGG	0.154630	4.2:-39671793	None:intergenic
ATCCAAATGGGAATTGTAAT+AGG	0.305610	4.2:+39671139	MS.gene003926:CDS
TATTGCTCATTGTCGATATT+AGG	0.315502	4.2:+39671332	MS.gene003926:CDS
GAGGCACTTCATTCCTTTGA+TGG	0.346468	4.2:+39671531	MS.gene003926:CDS
GAGTCCTTCAATTGCCCATT+TGG	0.366723	4.2:-39671650	None:intergenic
AGTGAGAGAGGCAAAGGAAA+AGG	0.368753	4.2:+39671115	MS.gene003926:CDS
CCTCCGAAGCCCATGATTCT+GGG	0.369639	4.2:-39671792	None:intergenic
GCACTGTTCACTAAAATATC+TGG	0.380900	4.2:-39671412	None:intergenic
AGTAAACATGTCTTCAGGTT+GGG	0.381329	4.2:+39671588	MS.gene003926:CDS
CACCTTACTGTGCATCCAAA+TGG	0.392499	4.2:+39671635	MS.gene003926:CDS
TCCCTATTACAATTCCCATT+TGG	0.393025	4.2:-39671141	None:intergenic
TCCGTCTGAAGAGTTTGATT+TGG	0.400438	4.2:+39671471	MS.gene003926:CDS
AAAGATGGTGCGCATTGTTA+TGG	0.400560	4.2:+39671372	MS.gene003926:CDS
ATCACGAGAACATCCGATAA+TGG	0.402820	4.2:-39671254	None:intergenic
ATCATAGTAAACATGTCTTC+AGG	0.407250	4.2:+39671583	MS.gene003926:CDS
AAGGGCTCTTGCGATTGAAT+TGG	0.409516	4.2:+39671216	MS.gene003926:CDS
AATCGAACAGTGATGATAAC+TGG	0.424427	4.2:+39671175	MS.gene003926:CDS
TCTTCAGGTTGGGGAAGATC+AGG	0.440844	4.2:+39671598	MS.gene003926:CDS
TTTATCAATCCCCAGAATCA+TGG	0.444345	4.2:+39671782	MS.gene003926:CDS
GACATGCTTGCTTCTTGCTA+TGG	0.444480	4.2:+39671745	MS.gene003926:CDS
GCCACCACTGCCATTCCTTT+AGG	0.452643	4.2:-39671697	None:intergenic
TCCAAATGGGAATTGTAATA+GGG	0.454554	4.2:+39671140	MS.gene003926:CDS
AATCGCGGCCACACCATTAT+CGG	0.456442	4.2:+39671241	MS.gene003926:CDS
ATCCCCAGAATCATGGGCTT+CGG	0.464636	4.2:+39671789	MS.gene003926:CDS
AGTGAGAGTGAGAGAGGCAA+AGG	0.465606	4.2:+39671109	MS.gene003926:CDS
CAATAACAACATTGAAAAGA+TGG	0.468847	4.2:+39671357	MS.gene003926:CDS
ACCTTACTGTGCATCCAAAT+GGG	0.476537	4.2:+39671636	MS.gene003926:CDS
TTGTTCTTGGTGACCATCAA+AGG	0.483001	4.2:-39671544	None:intergenic
GCCCATTTGGATGCACAGTA+AGG	0.483011	4.2:-39671637	None:intergenic
AGAGTTGGATTGGAGATGGC+TGG	0.483465	4.2:+39671085	None:intergenic
GCATCCAAATGGGCAATTGA+AGG	0.492681	4.2:+39671646	MS.gene003926:CDS
AAGAACAAGAATGAAGGGAG+AGG	0.501576	4.2:+39671559	MS.gene003926:CDS
AAAGGAAAAGGGATCCAAAT+GGG	0.506918	4.2:+39671127	MS.gene003926:CDS
TTATCAATCCCCAGAATCAT+GGG	0.513090	4.2:+39671783	MS.gene003926:CDS
GCAGTGGTGGCACTCAATCC+AGG	0.519784	4.2:+39671709	MS.gene003926:CDS
GTCACCAAGAACAAGAATGA+AGG	0.523351	4.2:+39671553	MS.gene003926:CDS
GTAAACATGTCTTCAGGTTG+GGG	0.529641	4.2:+39671589	MS.gene003926:CDS
GTGTTAGCAAAGGCCTCGGA+AGG	0.533687	4.2:+39671197	MS.gene003926:CDS
GTGAGAGAGGCAAAGGAAAA+GGG	0.536003	4.2:+39671116	MS.gene003926:CDS
AGAGAAGCACCATTGTCTGC+AGG	0.537045	4.2:-39671841	None:intergenic
GTGATGGATACAAACTTGAA+AGG	0.537223	4.2:+39671493	MS.gene003926:CDS
ATGTCAGTGTTGATGACTCC+TGG	0.543360	4.2:-39671727	None:intergenic
TAGTAAACATGTCTTCAGGT+TGG	0.548459	4.2:+39671587	MS.gene003926:CDS
CAAAGGAAAAGGGATCCAAA+TGG	0.549091	4.2:+39671126	MS.gene003926:CDS
CAACTCTTCAGCAACAGACT+TGG	0.549133	4.2:-39671674	None:intergenic
ACTGGTGTTAGCAAAGGCCT+CGG	0.553011	4.2:+39671193	MS.gene003926:CDS
GCCTAAAGGAATGGCAGTGG+TGG	0.559230	4.2:+39671696	MS.gene003926:CDS
TGAAGAGTTTGATTTGGTGA+TGG	0.564985	4.2:+39671477	MS.gene003926:CDS
CCCAGAATCATGGGCTTCGG+AGG	0.572981	4.2:+39671792	MS.gene003926:CDS
ACCAAATCAAACTCTTCAGA+CGG	0.574076	4.2:-39671472	None:intergenic
GTTGCTGAAGAGTTGCCTAA+AGG	0.577379	4.2:+39671682	MS.gene003926:CDS
TTAACAAGAACAACAAGATG+TGG	0.581720	4.2:+39671443	MS.gene003926:CDS
AGGTGTAAGATTGAGTATCT+TGG	0.582452	4.2:-39671821	None:intergenic
GCTGGTAGTGAGAGTGAGAG+AGG	0.586966	4.2:+39671103	MS.gene003926:CDS
CTCCGAAGCCCATGATTCTG+GGG	0.593057	4.2:-39671791	None:intergenic
TGAAGAGTTGCCTAAAGGAA+TGG	0.601209	4.2:+39671687	MS.gene003926:CDS
ATGATAACTGGTGTTAGCAA+AGG	0.602573	4.2:+39671187	MS.gene003926:CDS
AGAACAAGAATGAAGGGAGA+GGG	0.608978	4.2:+39671560	MS.gene003926:CDS
TCACCAAGAACAAGAATGAA+GGG	0.611804	4.2:+39671554	MS.gene003926:CDS
AATGAAGTGCCTCAACACAT+TGG	0.620714	4.2:-39671521	None:intergenic
TAACAAGAACAACAAGATGT+GGG	0.626572	4.2:+39671444	MS.gene003926:CDS
ATTGTAATAGGGAGAAGTGA+AGG	0.626867	4.2:+39671151	MS.gene003926:CDS
GTTGCCTAAAGGAATGGCAG+TGG	0.632507	4.2:+39671693	MS.gene003926:CDS
TGTAAGATTGAGTATCTTGG+TGG	0.636397	4.2:-39671818	None:intergenic
GCGATTGAATTGGCTAATCG+CGG	0.639248	4.2:+39671226	MS.gene003926:CDS
CTGTTCACTAAAATATCTGG+TGG	0.639819	4.2:-39671409	None:intergenic
AATCTTACACCTGCAGACAA+TGG	0.643533	4.2:+39671832	MS.gene003926:CDS
TGGGGATTGATAAAGAGATG+AGG	0.653991	4.2:-39671773	None:intergenic
CAATCGCAAGAGCCCTTCCG+AGG	0.659123	4.2:-39671210	None:intergenic
GAGAACATCCGATAATGGTG+TGG	0.672735	4.2:-39671249	None:intergenic
TGTTAGCAAAGGCCTCGGAA+GGG	0.679393	4.2:+39671198	MS.gene003926:CDS
CAAGAACAACAAGATGTGGG+AGG	0.691847	4.2:+39671447	MS.gene003926:CDS
AAGGTACTGCCAATGTGTTG+AGG	0.753722	4.2:+39671512	MS.gene003926:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	CAATAACAACATTGAAAAGA+TGG	+	chr4.2:39671357-39671376	MS.gene003926:CDS	25.0%
!!	CATCTTTTCAATGTTGTTAT+TGG	-	chr4.2:39671359-39671378	None:intergenic	25.0%
!!!	TTTTGGTAAGTTGAGATTTA+AGG	-	chr4.2:39671297-39671316	None:intergenic	25.0%
	ATCATAGTAAACATGTCTTC+AGG	+	chr4.2:39671583-39671602	MS.gene003926:CDS	30.0%
	ATCCAAATGGGAATTGTAAT+AGG	+	chr4.2:39671139-39671158	MS.gene003926:CDS	30.0%
	ATTGTTATGGAGAAAAAAGG+AGG	+	chr4.2:39671385-39671404	MS.gene003926:CDS	30.0%
	TAACAAGAACAACAAGATGT+GGG	+	chr4.2:39671444-39671463	MS.gene003926:CDS	30.0%
	TATTGCTCATTGTCGATATT+AGG	+	chr4.2:39671332-39671351	MS.gene003926:CDS	30.0%
	TCCAAATGGGAATTGTAATA+GGG	+	chr4.2:39671140-39671159	MS.gene003926:CDS	30.0%
	TTAACAAGAACAACAAGATG+TGG	+	chr4.2:39671443-39671462	MS.gene003926:CDS	30.0%
!!!	TAGATGATCGTTGTTGTTTT+TGG	-	chr4.2:39671314-39671333	None:intergenic	30.0%
	AAAGGAAAAGGGATCCAAAT+GGG	+	chr4.2:39671127-39671146	MS.gene003926:CDS	35.0%
	AATCGAACAGTGATGATAAC+TGG	+	chr4.2:39671175-39671194	MS.gene003926:CDS	35.0%
	ACCAAATCAAACTCTTCAGA+CGG	-	chr4.2:39671475-39671494	None:intergenic	35.0%
	AGGTGTAAGATTGAGTATCT+TGG	-	chr4.2:39671824-39671843	None:intergenic	35.0%
	ATTGTAATAGGGAGAAGTGA+AGG	+	chr4.2:39671151-39671170	MS.gene003926:CDS	35.0%
	CGCATTGTTATGGAGAAAAA+AGG	+	chr4.2:39671382-39671401	MS.gene003926:CDS	35.0%
	CTGTTCACTAAAATATCTGG+TGG	-	chr4.2:39671412-39671431	None:intergenic	35.0%
	GCACTGTTCACTAAAATATC+TGG	-	chr4.2:39671415-39671434	None:intergenic	35.0%
	TAGTAAACATGTCTTCAGGT+TGG	+	chr4.2:39671587-39671606	MS.gene003926:CDS	35.0%
	TCACCAAGAACAAGAATGAA+GGG	+	chr4.2:39671554-39671573	MS.gene003926:CDS	35.0%
	TCCCTATTACAATTCCCATT+TGG	-	chr4.2:39671144-39671163	None:intergenic	35.0%
	TGTAAGATTGAGTATCTTGG+TGG	-	chr4.2:39671821-39671840	None:intergenic	35.0%
	TTATCAATCCCCAGAATCAT+GGG	+	chr4.2:39671783-39671802	MS.gene003926:CDS	35.0%
	TTTATCAATCCCCAGAATCA+TGG	+	chr4.2:39671782-39671801	MS.gene003926:CDS	35.0%
!	AGTAAACATGTCTTCAGGTT+GGG	+	chr4.2:39671588-39671607	MS.gene003926:CDS	35.0%
!	ATGATAACTGGTGTTAGCAA+AGG	+	chr4.2:39671187-39671206	MS.gene003926:CDS	35.0%
!!	GTGATGGATACAAACTTGAA+AGG	+	chr4.2:39671493-39671512	MS.gene003926:CDS	35.0%
!!	TGAAGAGTTTGATTTGGTGA+TGG	+	chr4.2:39671477-39671496	MS.gene003926:CDS	35.0%
!!!	GATATTTTAGTGAACAGTGC+TGG	+	chr4.2:39671415-39671434	MS.gene003926:CDS	35.0%
	AAAGATGGTGCGCATTGTTA+TGG	+	chr4.2:39671372-39671391	MS.gene003926:CDS	40.0%
	AAGAACAAGAATGAAGGGAG+AGG	+	chr4.2:39671559-39671578	MS.gene003926:CDS	40.0%
	AATCTTACACCTGCAGACAA+TGG	+	chr4.2:39671832-39671851	MS.gene003926:CDS	40.0%
	ACCTTACTGTGCATCCAAAT+GGG	+	chr4.2:39671636-39671655	MS.gene003926:CDS	40.0%
	AGAACAAGAATGAAGGGAGA+GGG	+	chr4.2:39671560-39671579	MS.gene003926:CDS	40.0%
	ATCACGAGAACATCCGATAA+TGG	-	chr4.2:39671257-39671276	None:intergenic	40.0%
	CAAAGGAAAAGGGATCCAAA+TGG	+	chr4.2:39671126-39671145	MS.gene003926:CDS	40.0%
	GTCACCAAGAACAAGAATGA+AGG	+	chr4.2:39671553-39671572	MS.gene003926:CDS	40.0%
	TCCGTCTGAAGAGTTTGATT+TGG	+	chr4.2:39671471-39671490	MS.gene003926:CDS	40.0%
	TCTCCCTTCATTCTTGTTCT+TGG	-	chr4.2:39671560-39671579	None:intergenic	40.0%
	TGAAGAGTTGCCTAAAGGAA+TGG	+	chr4.2:39671687-39671706	MS.gene003926:CDS	40.0%
	TGGGGATTGATAAAGAGATG+AGG	-	chr4.2:39671776-39671795	None:intergenic	40.0%
!	AATGAAGTGCCTCAACACAT+TGG	-	chr4.2:39671524-39671543	None:intergenic	40.0%
!	TTGTTCTTGGTGACCATCAA+AGG	-	chr4.2:39671547-39671566	None:intergenic	40.0%
!!	GTAAACATGTCTTCAGGTTG+GGG	+	chr4.2:39671589-39671608	MS.gene003926:CDS	40.0%
	AAGGGCTCTTGCGATTGAAT+TGG	+	chr4.2:39671216-39671235	MS.gene003926:CDS	45.0%
	AGTGAGAGAGGCAAAGGAAA+AGG	+	chr4.2:39671115-39671134	MS.gene003926:CDS	45.0%
	CAACTCTTCAGCAACAGACT+TGG	-	chr4.2:39671677-39671696	None:intergenic	45.0%
	CAAGAACAACAAGATGTGGG+AGG	+	chr4.2:39671447-39671466	MS.gene003926:CDS	45.0%
	CACCTTACTGTGCATCCAAA+TGG	+	chr4.2:39671635-39671654	MS.gene003926:CDS	45.0%
	GACATGCTTGCTTCTTGCTA+TGG	+	chr4.2:39671745-39671764	MS.gene003926:CDS	45.0%
	GAGTCCTTCAATTGCCCATT+TGG	-	chr4.2:39671653-39671672	None:intergenic	45.0%
	GCATCCAAATGGGCAATTGA+AGG	+	chr4.2:39671646-39671665	MS.gene003926:CDS	45.0%
	GCGATTGAATTGGCTAATCG+CGG	+	chr4.2:39671226-39671245	MS.gene003926:CDS	45.0%
	GTGAGAGAGGCAAAGGAAAA+GGG	+	chr4.2:39671116-39671135	MS.gene003926:CDS	45.0%
	GTTGCTGAAGAGTTGCCTAA+AGG	+	chr4.2:39671682-39671701	MS.gene003926:CDS	45.0%
!	GAGAACATCCGATAATGGTG+TGG	-	chr4.2:39671252-39671271	None:intergenic	45.0%
!	GAGGCACTTCATTCCTTTGA+TGG	+	chr4.2:39671531-39671550	MS.gene003926:CDS	45.0%
!!	AAGGTACTGCCAATGTGTTG+AGG	+	chr4.2:39671512-39671531	MS.gene003926:CDS	45.0%
!!	ATGTCAGTGTTGATGACTCC+TGG	-	chr4.2:39671730-39671749	None:intergenic	45.0%
	AATCGCGGCCACACCATTAT+CGG	+	chr4.2:39671241-39671260	MS.gene003926:CDS	50.0%
	AGTGAGAGTGAGAGAGGCAA+AGG	+	chr4.2:39671109-39671128	MS.gene003926:CDS	50.0%
	ATCCCCAGAATCATGGGCTT+CGG	+	chr4.2:39671789-39671808	MS.gene003926:CDS	50.0%
	GCCCATTTGGATGCACAGTA+AGG	-	chr4.2:39671640-39671659	None:intergenic	50.0%
	GTTGCCTAAAGGAATGGCAG+TGG	+	chr4.2:39671693-39671712	MS.gene003926:CDS	50.0%
	TGTTAGCAAAGGCCTCGGAA+GGG	+	chr4.2:39671198-39671217	MS.gene003926:CDS	50.0%
!	ACTGGTGTTAGCAAAGGCCT+CGG	+	chr4.2:39671193-39671212	MS.gene003926:CDS	50.0%
!!	AGAGAAGCACCATTGTCTGC+AGG	-	chr4.2:39671844-39671863	None:intergenic	50.0%
!!	TCTTCAGGTTGGGGAAGATC+AGG	+	chr4.2:39671598-39671617	MS.gene003926:CDS	50.0%
	CCTCCGAAGCCCATGATTCT+GGG	-	chr4.2:39671795-39671814	None:intergenic	55.0%
	CTCCGAAGCCCATGATTCTG+GGG	-	chr4.2:39671794-39671813	None:intergenic	55.0%
	GCCACCACTGCCATTCCTTT+AGG	-	chr4.2:39671700-39671719	None:intergenic	55.0%
	GCCTAAAGGAATGGCAGTGG+TGG	+	chr4.2:39671696-39671715	MS.gene003926:CDS	55.0%
	GTGTTAGCAAAGGCCTCGGA+AGG	+	chr4.2:39671197-39671216	MS.gene003926:CDS	55.0%
!	GCTGGTAGTGAGAGTGAGAG+AGG	+	chr4.2:39671103-39671122	MS.gene003926:CDS	55.0%
	CAATCGCAAGAGCCCTTCCG+AGG	-	chr4.2:39671213-39671232	None:intergenic	60.0%
	CCCAGAATCATGGGCTTCGG+AGG	+	chr4.2:39671792-39671811	MS.gene003926:CDS	60.0%
	GCAGTGGTGGCACTCAATCC+AGG	+	chr4.2:39671709-39671728	MS.gene003926:CDS	60.0%
	GCCTCCGAAGCCCATGATTC+TGG	-	chr4.2:39671796-39671815	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	39671100	39671873	39671100	ID=MS.gene003926
chr4.2	mRNA	39671100	39671873	39671100	ID=MS.gene003926.t1;Parent=MS.gene003926
chr4.2	exon	39671100	39671873	39671100	ID=MS.gene003926.t1.exon1;Parent=MS.gene003926.t1
chr4.2	CDS	39671100	39671873	39671100	ID=cds.MS.gene003926.t1;Parent=MS.gene003926.t1

Gene Sequence

>MS.gene003926

ATGGCTGGTAGTGAGAGTGAGAGAGGCAAAGGAAAAGGGATCCAAATGGGAATTGTAATAGGGAGAAGTGAAGGAAATCGAACAGTGATGATAACTGGTGTTAGCAAAGGCCTCGGAAGGGCTCTTGCGATTGAATTGGCTAATCGCGGCCACACCATTATCGGATGTTCTCGTGATCATGATAAGCTCGAATTCCTTAAATCTCAACTTACCAAAAACAACAACGATCATCTATTGCTCATTGTCGATATTAGGTCCAATAACAACATTGAAAAGATGGTGCGCATTGTTATGGAGAAAAAAGGAGGTCCACCAGATATTTTAGTGAACAGTGCTGGAATCATTAACAAGAACAACAAGATGTGGGAGGTTCCGTCTGAAGAGTTTGATTTGGTGATGGATACAAACTTGAAAGGTACTGCCAATGTGTTGAGGCACTTCATTCCTTTGATGGTCACCAAGAACAAGAATGAAGGGAGAGGGATCATAGTAAACATGTCTTCAGGTTGGGGAAGATCAGGTGCAGCACTTGTAGCACCTTACTGTGCATCCAAATGGGCAATTGAAGGACTCACCAAGTCTGTTGCTGAAGAGTTGCCTAAAGGAATGGCAGTGGTGGCACTCAATCCAGGAGTCATCAACACTGACATGCTTGCTTCTTGCTATGGTGATTCCTCATCTCTTTATCAATCCCCAGAATCATGGGCTTCGGAGGCAGCCACCAAGATACTCAATCTTACACCTGCAGACAATGGTGCTTCTCTCTCTATTTGA

Protein sequence

>MS.gene003926.t1

MAGSESERGKGKGIQMGIVIGRSEGNRTVMITGVSKGLGRALAIELANRGHTIIGCSRDHDKLEFLKSQLTKNNNDHLLLIVDIRSNNNIEKMVRIVMEKKGGPPDILVNSAGIINKNNKMWEVPSEEFDLVMDTNLKGTANVLRHFIPLMVTKNKNEGRGIIVNMSSGWGRSGAALVAPYCASKWAIEGLTKSVAEELPKGMAVVALNPGVINTDMLASCYGDSSSLYQSPESWASEAATKILNLTPADNGASLSI