AlfalfaGEDB | MS.gene003729

M. sativa cultivar XinJiangDaYe / MS.gene003729

KEGG: -
GO: GO:0003674 GO:0003824 GO:0016491
PFAM: PF00106.28

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003729.t1	XP_013456232.1	81.3	257	47	1	1	256	1	257	6.50E-109	403.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003729.t1	Q9SY73	63.0	230	80	2	27	256	18	242	4.0e-75	282.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003729.t1	A0A072UMG3	81.3	257	47	1	1	256	1	257	4.7e-109	403.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene050431	MS.gene003729	PPI
MS.gene050131	MS.gene003729	PPI
MS.gene043387	MS.gene003729	PPI
MS.gene25667	MS.gene003729	PPI
MS.gene62193	MS.gene003729	PPI
MS.gene85724	MS.gene003729	PPI
MS.gene31507	MS.gene003729	PPI
MS.gene41122	MS.gene003729	PPI
MS.gene073684	MS.gene003729	PPI
MS.gene63308	MS.gene003729	PPI
MS.gene80360	MS.gene003729	PPI
MS.gene033685	MS.gene003729	PPI
MS.gene008153	MS.gene003729	PPI
MS.gene23019	MS.gene003729	PPI
MS.gene014425	MS.gene003729	PPI
MS.gene63482	MS.gene003729	PPI
MS.gene007002	MS.gene003729	PPI
MS.gene018066	MS.gene003729	PPI
MS.gene28848	MS.gene003729	PPI
MS.gene87026	MS.gene003729	PPI
MS.gene63307	MS.gene003729	PPI
MS.gene87780	MS.gene003729	PPI
MS.gene30551	MS.gene003729	PPI
MS.gene003992	MS.gene003729	PPI
MS.gene003729	MS.gene30551	PPI
MS.gene07096	MS.gene003729	PPI
MS.gene03319	MS.gene003729	PPI
MS.gene62195	MS.gene003729	PPI
MS.gene050432	MS.gene003729	PPI
MS.gene42260	MS.gene003729	PPI
MS.gene08694	MS.gene003729	PPI
MS.gene25674	MS.gene003729	PPI
MS.gene52742	MS.gene003729	PPI
MS.gene007006	MS.gene003729	PPI
MS.gene072664	MS.gene003729	PPI
MS.gene50522	MS.gene003729	PPI
MS.gene28847	MS.gene003729	PPI
MS.gene62194	MS.gene003729	PPI
MS.gene007678	MS.gene003729	PPI
MS.gene63484	MS.gene003729	PPI
MS.gene008162	MS.gene003729	PPI
MS.gene003729	MS.gene003992	PPI
MS.gene028938	MS.gene003729	PPI
MS.gene50524	MS.gene003729	PPI
MS.gene064756	MS.gene003729	PPI
MS.gene42856	MS.gene003729	PPI
MS.gene63403	MS.gene003729	PPI
MS.gene019786	MS.gene003729	PPI
MS.gene52743	MS.gene003729	PPI
MS.gene008161	MS.gene003729	PPI
MS.gene08756	MS.gene003729	PPI
MS.gene07097	MS.gene003729	PPI
MS.gene08695	MS.gene003729	PPI
MS.gene63306	MS.gene003729	PPI
MS.gene62187	MS.gene003729	PPI
MS.gene63300	MS.gene003729	PPI
MS.gene42114	MS.gene003729	PPI
MS.gene006999	MS.gene003729	PPI
MS.gene021164	MS.gene003729	PPI
MS.gene008160	MS.gene003729	PPI
MS.gene63483	MS.gene003729	PPI
MS.gene04700	MS.gene003729	PPI
MS.gene055846	MS.gene003729	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003729.t1	MTR_4g066050	81.323	257	47	1	1	256	1	257	1.67e-148	415
MS.gene003729.t1	MTR_4g070490	79.377	257	52	1	1	256	1	257	2.56e-141	397
MS.gene003729.t1	MTR_4g134660	74.684	237	57	2	21	256	3	237	3.40e-123	350
MS.gene003729.t1	MTR_4g070500	71.094	256	34	2	1	256	1	216	1.28e-105	305
MS.gene003729.t1	MTR_7g080410	28.351	194	130	3	26	214	40	229	4.35e-16	76.6
MS.gene003729.t1	MTR_7g080410	28.351	194	130	3	26	214	40	229	6.36e-16	76.3
MS.gene003729.t1	MTR_3g068085	31.361	169	110	3	28	195	19	182	3.65e-15	73.6
MS.gene003729.t1	MTR_3g068070	31.034	174	104	5	28	195	19	182	1.12e-13	69.3
MS.gene003729.t1	MTR_7g083870	31.156	199	127	5	21	216	32	223	1.26e-13	69.7
MS.gene003729.t1	MTR_4g131740	26.667	195	128	5	27	212	43	231	4.21e-13	68.2
MS.gene003729.t1	MTR_7g094510	28.141	199	131	6	26	217	8	201	7.69e-13	66.6
MS.gene003729.t1	MTR_7g071680	30.500	200	127	6	22	217	28	219	9.14e-13	67.0
MS.gene003729.t1	MTR_4g058840	27.136	199	138	5	27	220	14	210	4.25e-11	62.0
MS.gene003729.t1	MTR_4g058820	27.136	199	138	5	27	220	14	210	4.25e-11	62.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene003729.t1	AT1G10310	63.043	230	80	2	27	256	18	242	1.47e-99	290
MS.gene003729.t1	AT3G51680	31.034	203	128	6	22	217	31	228	1.11e-14	72.8
MS.gene003729.t1	AT5G65205	29.358	218	127	9	23	232	5	203	2.37e-13	68.6
MS.gene003729.t1	AT5G18210	27.317	205	134	5	23	217	7	206	8.68e-13	66.6
MS.gene003729.t1	AT5G18210	27.363	201	131	5	27	217	11	206	1.36e-12	66.2
MS.gene003729.t1	AT5G10050	30.918	207	126	8	29	232	10	202	1.69e-12	66.2
MS.gene003729.t1	AT1G63380	25.837	209	133	7	26	221	24	223	3.85e-12	65.1
MS.gene003729.t1	AT1G63380	25.837	209	133	7	26	221	17	216	4.20e-12	65.1
MS.gene003729.t1	AT1G63380	25.837	209	133	7	26	221	21	220	4.51e-12	65.1
MS.gene003729.t1	AT1G63380	25.837	209	133	7	26	221	19	218	4.84e-12	65.1
MS.gene003729.t1	AT2G29150	30.806	211	129	8	28	232	20	219	5.21e-12	64.7
MS.gene003729.t1	AT2G17845	26.131	199	137	5	26	216	49	245	5.91e-12	65.1
MS.gene003729.t1	AT2G47120	28.571	203	129	7	19	216	3	194	1.58e-11	63.2
MS.gene003729.t1	AT1G24360	28.205	195	131	6	29	220	79	267	4.35e-11	62.4
MS.gene003729.t1	AT1G24470	28.922	204	115	8	30	218	56	244	6.01e-11	62.0
MS.gene003729.t1	AT2G47120	28.500	200	127	7	22	216	5	193	9.99e-11	60.8

Find 83 sgRNAs with CRISPR-Local

Find 89 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GCCTCCAAAACCCATGATTC+TGG	0.253121	4.1:+32422111	None:intergenic
ATCCCCAGAATCATGGGTTT+TGG	0.308367	4.1:-32422115	MS.gene003729:CDS
GAGGCACTTAATTCCTTTGA+TGG	0.340124	4.1:-32422373	MS.gene003729:CDS
TTAGGTGAGTGACTTCAAAT+AGG	0.346446	4.1:+32422039	None:intergenic
GCGTCGTTCACTATAATATC+TGG	0.355241	4.1:+32422492	None:intergenic
ATAATAGTGAATATGTCTTT+AGG	0.356634	4.1:-32422321	MS.gene003729:CDS
TATTCCTCAATATTGATGTT+AGG	0.359821	4.1:-32422572	MS.gene003729:CDS
GAGTCCTTCAATTGCCCATT+TGG	0.366723	4.1:+32422254	None:intergenic
CGGAGGAAAAGGGATGGAAA+TGG	0.366822	4.1:-32422775	MS.gene003729:CDS
AGTGAATATGTCTTTAGGTT+GGG	0.368035	4.1:-32422316	MS.gene003729:CDS
ATGGAAATGGGAATTGGAAT+AGG	0.369258	4.1:-32422762	MS.gene003729:CDS
AGAGATGGCGCGCATTGTTA+TGG	0.379378	4.1:-32422532	MS.gene003729:CDS
AAGGGCTCTTGCGATTGAAT+TGG	0.390870	4.1:-32422685	MS.gene003729:CDS
CACCTTACTGTGCATCCAAA+TGG	0.392499	4.1:-32422269	MS.gene003729:CDS
TTAACAAGAACAACAAGATC+TGG	0.404757	4.1:-32422461	MS.gene003729:CDS
AATAGACGATGGTGGTTGTT+GGG	0.406634	4.1:+32422591	None:intergenic
GGTGAGAGAGGCGGAGGAAA+AGG	0.408023	4.1:-32422786	MS.gene003729:CDS
AAAGGGATGGAAATGGGAAT+TGG	0.409194	4.1:-32422768	MS.gene003729:CDS
CCTCCAAAACCCATGATTCT+GGG	0.409947	4.1:+32422112	None:intergenic
GGAGGAAAAGGGATGGAAAT+GGG	0.423328	4.1:-32422774	MS.gene003729:CDS
AATCGAACAGTGATGATAAC+TGG	0.424427	4.1:-32422726	MS.gene003729:CDS
TCTTTAGGTTGGGGAAGATC+AGG	0.425741	4.1:-32422306	MS.gene003729:CDS
TTTGTCTGAAGAGTTTGATT+TGG	0.426806	4.1:-32422433	MS.gene003729:CDS
TCAATCAATCCCCAGAATCA+TGG	0.442190	4.1:-32422122	MS.gene003729:CDS
ATTGTCTGTTGGTGTAAGAT+TGG	0.445289	4.1:+32422074	None:intergenic
TGGTGTAAGATTGGGTATCT+TGG	0.449602	4.1:+32422083	None:intergenic
GTGAATATGTCTTTAGGTTG+GGG	0.469180	4.1:-32422315	MS.gene003729:CDS
TGGAAATGGGAATTGGAATA+GGG	0.469210	4.1:-32422761	MS.gene003729:CDS
TAGTGAATATGTCTTTAGGT+TGG	0.470974	4.1:-32422317	MS.gene003729:CDS
ACCTTACTGTGCATCCAAAT+GGG	0.476537	4.1:-32422268	MS.gene003729:CDS
GCCCATTTGGATGCACAGTA+AGG	0.483011	4.1:+32422267	None:intergenic
GTTGCTGAAGGGTTGCCTAT+AGG	0.485481	4.1:-32422222	MS.gene003729:CDS
GCATCCAAATGGGCAATTGA+AGG	0.492681	4.1:-32422258	MS.gene003729:CDS
TGCACCTAACATCAATATTG+AGG	0.492767	4.1:+32422568	None:intergenic
AGAATTGGATTGGAGATGGT+TGG	0.492936	4.1:-32422816	None:intergenic
TAGGTGAGTGACTTCAAATA+GGG	0.510834	4.1:+32422040	None:intergenic
TTGTCTGTTGGTGTAAGATT+GGG	0.516390	4.1:+32422075	None:intergenic
GAATAGACGATGGTGGTTGT+TGG	0.519411	4.1:+32422590	None:intergenic
CAATCAATCCCCAGAATCAT+GGG	0.519585	4.1:-32422121	MS.gene003729:CDS
GAAGTGGTGGCACTCAATCC+AGG	0.519784	4.1:-32422195	MS.gene003729:CDS
GTGAGAGAGGCGGAGGAAAA+GGG	0.520023	4.1:-32422785	MS.gene003729:CDS
GCCACCACTTCCATTCCTAT+AGG	0.520698	4.1:+32422207	None:intergenic
TGGGGATTGATTGAGAGATG+TGG	0.530430	4.1:+32422131	None:intergenic
GTGATGGACACCAACTTGAA+AGG	0.532821	4.1:-32422411	MS.gene003729:CDS
GCGATTGAATTGGCTTATCA+CGG	0.533226	4.1:-32422675	MS.gene003729:CDS
GTGTTAGCAAAGGCCTCGGA+AGG	0.533687	4.1:-32422704	MS.gene003729:CDS
CTCACCAAGTCTGTTGCTGA+AGG	0.540104	4.1:-32422234	MS.gene003729:CDS
ATGTCAGTGTTGATGACTCC+TGG	0.543360	4.1:+32422177	None:intergenic
ACTGGTGTTAGCAAAGGCCT+CGG	0.553011	4.1:-32422708	MS.gene003729:CDS
TGTAAGATTGGGTATCTTGG+TGG	0.553477	4.1:+32422086	None:intergenic
CAACCCTTCAGCAACAGACT+TGG	0.559452	4.1:+32422230	None:intergenic
TGAAGAGTTTGATTTGGTGA+TGG	0.560247	4.1:-32422427	MS.gene003729:CDS
GAGAGGCGGAGGAAAAGGGA+TGG	0.560586	4.1:-32422781	MS.gene003729:CDS
AGTGACGGTGAGAGAGGCGG+AGG	0.562764	4.1:-32422792	MS.gene003729:CDS
ATTGGAAGTACCTTTCAAGT+TGG	0.564044	4.1:+32422401	None:intergenic
TGTTGGGAAGTTGAGATTGA+AGG	0.568026	4.1:+32422607	None:intergenic
CAATAACAAGGTTGAAGAGA+TGG	0.568927	4.1:-32422547	MS.gene003729:CDS
TAACAAGAACAACAAGATCT+GGG	0.574050	4.1:-32422460	MS.gene003729:CDS
AATTAAGTGCCTCAACACAT+TGG	0.578421	4.1:+32422383	None:intergenic
ATTGGAATAGGGAGGAGCGA+AGG	0.579746	4.1:-32422750	MS.gene003729:CDS
TGATGTTAGGTGCAATAACA+AGG	0.580021	4.1:-32422559	MS.gene003729:CDS
GATATTATAGTGAACGACGC+TGG	0.582038	4.1:-32422489	MS.gene003729:CDS
CTCCAAAACCCATGATTCTG+GGG	0.583528	4.1:+32422113	None:intergenic
GCCTATAGGAATGGAAGTGG+TGG	0.586380	4.1:-32422208	MS.gene003729:CDS
TTGGAGATGGTTGGTAGTGA+CGG	0.588707	4.1:-32422807	None:intergenic
GTTGGTAGTGACGGTGAGAG+AGG	0.596700	4.1:-32422798	MS.gene003729:CDS
ATGATAACTGGTGTTAGCAA+AGG	0.602573	4.1:-32422714	MS.gene003729:CDS
GTTGCCTATAGGAATGGAAG+TGG	0.603872	4.1:-32422211	MS.gene003729:CDS
AGAGAAGCACCATTGTCTGT+TGG	0.612372	4.1:+32422063	None:intergenic
TCACCAAGTCTGTTGCTGAA+GGG	0.612478	4.1:-32422233	MS.gene003729:CDS
TGAAGGGTTGCCTATAGGAA+TGG	0.620094	4.1:-32422217	MS.gene003729:CDS
AATCTTACACCAACAGACAA+TGG	0.636592	4.1:-32422072	MS.gene003729:CDS
GGTAGTGACGGTGAGAGAGG+CGG	0.649565	4.1:-32422795	MS.gene003729:CDS
CAATCGCAAGAGCCCTTCCG+AGG	0.659123	4.1:+32422691	None:intergenic
AAATGGGAATTGGAATAGGG+AGG	0.665254	4.1:-32422758	MS.gene003729:CDS
GTGAACATTCAACAATGGTG+TGG	0.675244	4.1:+32422652	None:intergenic
ATCACGTGAACATTCAACAA+TGG	0.675921	4.1:+32422647	None:intergenic
TGTTAGCAAAGGCCTCGGAA+GGG	0.679393	4.1:-32422703	MS.gene003729:CDS
TCGTTCACTATAATATCTGG+AGG	0.683522	4.1:+32422495	None:intergenic
TATTGAGGAATAGACGATGG+TGG	0.686040	4.1:+32422583	None:intergenic
AAGGTACTTCCAATGTGTTG+AGG	0.694503	4.1:-32422392	MS.gene003729:CDS
CAATATTGAGGAATAGACGA+TGG	0.702490	4.1:+32422580	None:intergenic
CAAGAACAACAAGATCTGGG+AGG	0.711405	4.1:-32422457	MS.gene003729:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATAATAGTGAATATGTCTTT+AGG	-	chr4.1:32422533-32422552	MS.gene003729:CDS	20.0%
!!	TTAAAAAGAACAAGAATGAA+GGG	-	chr4.1:32422504-32422523	MS.gene003729:CDS	20.0%
!	GTTAAAAAGAACAAGAATGA+AGG	-	chr4.1:32422503-32422522	MS.gene003729:CDS	25.0%
!	TAAAAAGAACAAGAATGAAG+GGG	-	chr4.1:32422505-32422524	MS.gene003729:CDS	25.0%
!	TATTCCTCAATATTGATGTT+AGG	-	chr4.1:32422282-32422301	MS.gene003729:CDS	25.0%
!!	TTGTTCTTTTTAACCATCAA+AGG	+	chr4.1:32422497-32422516	None:intergenic	25.0%
	AAAAAGAACAAGAATGAAGG+GGG	-	chr4.1:32422506-32422525	MS.gene003729:CDS	30.0%
	ATTGTTATGGAGAAAAATGG+AGG	-	chr4.1:32422335-32422354	MS.gene003729:CDS	30.0%
	TAACAAGAACAACAAGATCT+GGG	-	chr4.1:32422394-32422413	MS.gene003729:CDS	30.0%
	TAGTGAATATGTCTTTAGGT+TGG	-	chr4.1:32422537-32422556	MS.gene003729:CDS	30.0%
	TTAACAAGAACAACAAGATC+TGG	-	chr4.1:32422393-32422412	MS.gene003729:CDS	30.0%
	TTTGTCTGAAGAGTTTGATT+TGG	-	chr4.1:32422421-32422440	MS.gene003729:CDS	30.0%
!	AGTGAATATGTCTTTAGGTT+GGG	-	chr4.1:32422538-32422557	MS.gene003729:CDS	30.0%
	AATCGAACAGTGATGATAAC+TGG	-	chr4.1:32422128-32422147	MS.gene003729:CDS	35.0%
	AATCTTACACCAACAGACAA+TGG	-	chr4.1:32422782-32422801	MS.gene003729:CDS	35.0%
	AATTAAGTGCCTCAACACAT+TGG	+	chr4.1:32422474-32422493	None:intergenic	35.0%
	ATCACGTGAACATTCAACAA+TGG	+	chr4.1:32422210-32422229	None:intergenic	35.0%
	ATGGAAATGGGAATTGGAAT+AGG	-	chr4.1:32422092-32422111	MS.gene003729:CDS	35.0%
	ATTGTCTGTTGGTGTAAGAT+TGG	+	chr4.1:32422783-32422802	None:intergenic	35.0%
	CAATAACAAGGTTGAAGAGA+TGG	-	chr4.1:32422307-32422326	MS.gene003729:CDS	35.0%
	CAATATTGAGGAATAGACGA+TGG	+	chr4.1:32422277-32422296	None:intergenic	35.0%
	CGCATTGTTATGGAGAAAAA+TGG	-	chr4.1:32422332-32422351	MS.gene003729:CDS	35.0%
	TCGTTCACTATAATATCTGG+AGG	+	chr4.1:32422362-32422381	None:intergenic	35.0%
	TGATGTTAGGTGCAATAACA+AGG	-	chr4.1:32422295-32422314	MS.gene003729:CDS	35.0%
	TGCACCTAACATCAATATTG+AGG	+	chr4.1:32422289-32422308	None:intergenic	35.0%
	TGGAAATGGGAATTGGAATA+GGG	-	chr4.1:32422093-32422112	MS.gene003729:CDS	35.0%
	TTGTCTGTTGGTGTAAGATT+GGG	+	chr4.1:32422782-32422801	None:intergenic	35.0%
!	ATGATAACTGGTGTTAGCAA+AGG	-	chr4.1:32422140-32422159	MS.gene003729:CDS	35.0%
!!	ATTGGAAGTACCTTTCAAGT+TGG	+	chr4.1:32422456-32422475	None:intergenic	35.0%
!!	GTGAATATGTCTTTAGGTTG+GGG	-	chr4.1:32422539-32422558	MS.gene003729:CDS	35.0%
!!	TGAAGAGTTTGATTTGGTGA+TGG	-	chr4.1:32422427-32422446	MS.gene003729:CDS	35.0%
	AAAGGGATGGAAATGGGAAT+TGG	-	chr4.1:32422086-32422105	MS.gene003729:CDS	40.0%
	AAATGGGAATTGGAATAGGG+AGG	-	chr4.1:32422096-32422115	MS.gene003729:CDS	40.0%
	ACCTTACTGTGCATCCAAAT+GGG	-	chr4.1:32422586-32422605	MS.gene003729:CDS	40.0%
	CAATCAATCCCCAGAATCAT+GGG	-	chr4.1:32422733-32422752	MS.gene003729:CDS	40.0%
	GATATTATAGTGAACGACGC+TGG	-	chr4.1:32422365-32422384	MS.gene003729:CDS	40.0%
	GCGTCGTTCACTATAATATC+TGG	+	chr4.1:32422365-32422384	None:intergenic	40.0%
	GTGAACATTCAACAATGGTG+TGG	+	chr4.1:32422205-32422224	None:intergenic	40.0%
	TATTGAGGAATAGACGATGG+TGG	+	chr4.1:32422274-32422293	None:intergenic	40.0%
	TCAATCAATCCCCAGAATCA+TGG	-	chr4.1:32422732-32422751	MS.gene003729:CDS	40.0%
	TGGTGTAAGATTGGGTATCT+TGG	+	chr4.1:32422774-32422793	None:intergenic	40.0%
	TGTAAGATTGGGTATCTTGG+TGG	+	chr4.1:32422771-32422790	None:intergenic	40.0%
	TGTTGGGAAGTTGAGATTGA+AGG	+	chr4.1:32422250-32422269	None:intergenic	40.0%
!	AAGGTACTTCCAATGTGTTG+AGG	-	chr4.1:32422462-32422481	MS.gene003729:CDS	40.0%
!	AATAGACGATGGTGGTTGTT+GGG	+	chr4.1:32422266-32422285	None:intergenic	40.0%
!	GAGGCACTTAATTCCTTTGA+TGG	-	chr4.1:32422481-32422500	MS.gene003729:CDS	40.0%
!	GCGATTGAATTGGCTTATCA+CGG	-	chr4.1:32422179-32422198	MS.gene003729:CDS	40.0%
	AAGAACAAGAATGAAGGGGG+AGG	-	chr4.1:32422509-32422528	MS.gene003729:CDS	45.0%
	AAGGGCTCTTGCGATTGAAT+TGG	-	chr4.1:32422169-32422188	MS.gene003729:CDS	45.0%
	AGAACAAGAATGAAGGGGGA+GGG	-	chr4.1:32422510-32422529	MS.gene003729:CDS	45.0%
	CAAGAACAACAAGATCTGGG+AGG	-	chr4.1:32422397-32422416	MS.gene003729:CDS	45.0%
	CACCTTACTGTGCATCCAAA+TGG	-	chr4.1:32422585-32422604	MS.gene003729:CDS	45.0%
	CCTCCAAAACCCATGATTCT+GGG	+	chr4.1:32422745-32422764	None:intergenic	45.0%
	CTCCAAAACCCATGATTCTG+GGG	+	chr4.1:32422744-32422763	None:intergenic	45.0%
	GAGTCCTTCAATTGCCCATT+TGG	+	chr4.1:32422603-32422622	None:intergenic	45.0%
	GCATCCAAATGGGCAATTGA+AGG	-	chr4.1:32422596-32422615	MS.gene003729:CDS	45.0%
	GGAGGAAAAGGGATGGAAAT+GGG	-	chr4.1:32422080-32422099	MS.gene003729:CDS	45.0%
	GTTGCCTATAGGAATGGAAG+TGG	-	chr4.1:32422643-32422662	MS.gene003729:CDS	45.0%
	TCACCAAGTCTGTTGCTGAA+GGG	-	chr4.1:32422621-32422640	MS.gene003729:CDS	45.0%
	TGAAGGGTTGCCTATAGGAA+TGG	-	chr4.1:32422637-32422656	MS.gene003729:CDS	45.0%
	TGGGGATTGATTGAGAGATG+TGG	+	chr4.1:32422726-32422745	None:intergenic	45.0%
!	ATCCCCAGAATCATGGGTTT+TGG	-	chr4.1:32422739-32422758	MS.gene003729:CDS	45.0%
!	GAATAGACGATGGTGGTTGT+TGG	+	chr4.1:32422267-32422286	None:intergenic	45.0%
!!	AGAGAAGCACCATTGTCTGT+TGG	+	chr4.1:32422794-32422813	None:intergenic	45.0%
!!	ATGTCAGTGTTGATGACTCC+TGG	+	chr4.1:32422680-32422699	None:intergenic	45.0%
!!	GTGATGGACACCAACTTGAA+AGG	-	chr4.1:32422443-32422462	MS.gene003729:CDS	45.0%
!!	TCTTTAGGTTGGGGAAGATC+AGG	-	chr4.1:32422548-32422567	MS.gene003729:CDS	45.0%
	AGAGATGGCGCGCATTGTTA+TGG	-	chr4.1:32422322-32422341	MS.gene003729:CDS	50.0%
	ATTGGAATAGGGAGGAGCGA+AGG	-	chr4.1:32422104-32422123	MS.gene003729:CDS	50.0%
	CAACCCTTCAGCAACAGACT+TGG	+	chr4.1:32422627-32422646	None:intergenic	50.0%
	CGGAGGAAAAGGGATGGAAA+TGG	-	chr4.1:32422079-32422098	MS.gene003729:CDS	50.0%
	CTCACCAAGTCTGTTGCTGA+AGG	-	chr4.1:32422620-32422639	MS.gene003729:CDS	50.0%
	GCCACCACTTCCATTCCTAT+AGG	+	chr4.1:32422650-32422669	None:intergenic	50.0%
	GCCCATTTGGATGCACAGTA+AGG	+	chr4.1:32422590-32422609	None:intergenic	50.0%
	GCCTATAGGAATGGAAGTGG+TGG	-	chr4.1:32422646-32422665	MS.gene003729:CDS	50.0%
	GCCTCCAAAACCCATGATTC+TGG	+	chr4.1:32422746-32422765	None:intergenic	50.0%
	GTTGCTGAAGGGTTGCCTAT+AGG	-	chr4.1:32422632-32422651	MS.gene003729:CDS	50.0%
	TGTTAGCAAAGGCCTCGGAA+GGG	-	chr4.1:32422151-32422170	MS.gene003729:CDS	50.0%
!	ACTGGTGTTAGCAAAGGCCT+CGG	-	chr4.1:32422146-32422165	MS.gene003729:CDS	50.0%
!!	CCCAGAATCATGGGTTTTGG+AGG	-	chr4.1:32422742-32422761	MS.gene003729:CDS	50.0%
	GAAGTGGTGGCACTCAATCC+AGG	-	chr4.1:32422659-32422678	MS.gene003729:CDS	55.0%
	GTGAGAGAGGCGGAGGAAAA+GGG	-	chr4.1:32422069-32422088	MS.gene003729:CDS	55.0%
	GTGTTAGCAAAGGCCTCGGA+AGG	-	chr4.1:32422150-32422169	MS.gene003729:CDS	55.0%
!!	GTTGGTAGTGACGGTGAGAG+AGG	-	chr4.1:32422056-32422075	MS.gene003729:CDS	55.0%
	CAATCGCAAGAGCCCTTCCG+AGG	+	chr4.1:32422166-32422185	None:intergenic	60.0%
	GAGAGGCGGAGGAAAAGGGA+TGG	-	chr4.1:32422073-32422092	MS.gene003729:CDS	60.0%
	GGTAGTGACGGTGAGAGAGG+CGG	-	chr4.1:32422059-32422078	MS.gene003729:CDS	60.0%
	GGTGAGAGAGGCGGAGGAAA+AGG	-	chr4.1:32422068-32422087	MS.gene003729:CDS	60.0%
	AGTGACGGTGAGAGAGGCGG+AGG	-	chr4.1:32422062-32422081	MS.gene003729:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.1	gene	32422053	32422823	32422053	ID=MS.gene003729
chr4.1	mRNA	32422053	32422823	32422053	ID=MS.gene003729.t1;Parent=MS.gene003729
chr4.1	exon	32422053	32422823	32422053	ID=MS.gene003729.t1.exon1;Parent=MS.gene003729.t1
chr4.1	CDS	32422053	32422823	32422053	ID=cds.MS.gene003729.t1;Parent=MS.gene003729.t1

Gene Sequence

>MS.gene003729

ATGGTTGGTAGTGACGGTGAGAGAGGCGGAGGAAAAGGGATGGAAATGGGAATTGGAATAGGGAGGAGCGAAGGAAATCGAACAGTGATGATAACTGGTGTTAGCAAAGGCCTCGGAAGGGCTCTTGCGATTGAATTGGCTTATCACGGCCACACCATTGTTGAATGTTCACGTGATCAAGATAAGCTCGACTTCCTTCAATCTCAACTTCCCAACAACCACCATCGTCTATTCCTCAATATTGATGTTAGGTGCAATAACAAGGTTGAAGAGATGGCGCGCATTGTTATGGAGAAAAATGGAGGTCCTCCAGATATTATAGTGAACGACGCTGGAGTCATTAACAAGAACAACAAGATCTGGGAGGTTTTGTCTGAAGAGTTTGATTTGGTGATGGACACCAACTTGAAAGGTACTTCCAATGTGTTGAGGCACTTAATTCCTTTGATGGTTAAAAAGAACAAGAATGAAGGGGGAGGGATAATAGTGAATATGTCTTTAGGTTGGGGAAGATCAGGTGCTGCACTTGTAGCACCTTACTGTGCATCCAAATGGGCAATTGAAGGACTCACCAAGTCTGTTGCTGAAGGGTTGCCTATAGGAATGGAAGTGGTGGCACTCAATCCAGGAGTCATCAACACTGACATGCTTGCTTCTTTCTATTGTGCTTCCACATCTCTCAATCAATCCCCAGAATCATGGGTTTTGGAGGCAGCCACCAAGATACCCAATCTTACACCAACAGACAATGGTGCTTCTCTCCCTATTTGA

Protein sequence

>MS.gene003729.t1

MVGSDGERGGGKGMEMGIGIGRSEGNRTVMITGVSKGLGRALAIELAYHGHTIVECSRDQDKLDFLQSQLPNNHHRLFLNIDVRCNNKVEEMARIVMEKNGGPPDIIVNDAGVINKNNKIWEVLSEEFDLVMDTNLKGTSNVLRHLIPLMVKKNKNEGGGIIVNMSLGWGRSGAALVAPYCASKWAIEGLTKSVAEGLPIGMEVVALNPGVINTDMLASFYCASTSLNQSPESWVLEAATKIPNLTPTDNGASLPI