AlfalfaGEDB | MS.gene056339

M. sativa cultivar XinJiangDaYe / MS.gene056339

KEGG: -
GO: GO:0003674 GO:0003824 GO:0016491
PFAM: PF00106.28

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene056339.t1	XP_013456232.1	74	258	65	2	1	257	1	257	5.40E-95	357.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene056339.t1	Q9SY73	57.1	231	93	2	27	257	18	242	6.5e-65	248.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene056339.t1	A0A072UMG3	74.0	258	65	2	1	257	1	257	3.9e-95	357.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene056339	MS.gene63307	PPI
MS.gene056339	MS.gene043387	PPI
MS.gene056339	MS.gene25674	PPI
MS.gene056339	MS.gene014425	PPI
MS.gene056339	MS.gene008153	PPI
MS.gene056339	MS.gene62193	PPI
MS.gene056339	MS.gene08756	PPI
MS.gene056339	MS.gene63484	PPI
MS.gene056339	MS.gene42114	PPI
MS.gene056339	MS.gene007678	PPI
MS.gene41122	MS.gene056339	PPI
MS.gene056339	MS.gene028938	PPI
MS.gene056339	MS.gene25667	PPI
MS.gene056339	MS.gene003992	PPI
MS.gene056339	MS.gene30551	PPI
MS.gene056339	MS.gene63306	PPI
MS.gene056339	MS.gene055846	PPI
MS.gene056339	MS.gene62195	PPI
MS.gene056339	MS.gene63300	PPI
MS.gene056339	MS.gene033685	PPI
MS.gene056339	MS.gene85724	PPI
MS.gene056339	MS.gene87780	PPI
MS.gene056339	MS.gene63308	PPI
MS.gene056339	MS.gene018066	PPI
MS.gene056339	MS.gene80360	PPI
MS.gene056339	MS.gene008160	PPI
MS.gene056339	MS.gene019786	PPI
MS.gene056339	MS.gene007002	PPI
MS.gene056339	MS.gene050131	PPI
MS.gene056339	MS.gene87026	PPI
MS.gene056339	MS.gene52743	PPI
MS.gene056339	MS.gene072664	PPI
MS.gene056339	MS.gene07097	PPI
MS.gene056339	MS.gene021164	PPI
MS.gene056339	MS.gene42260	PPI
MS.gene056339	MS.gene050431	PPI
MS.gene056339	MS.gene07096	PPI
MS.gene056339	MS.gene41122	PPI
MS.gene056339	MS.gene064756	PPI
MS.gene056339	MS.gene63483	PPI
MS.gene056339	MS.gene50524	PPI
MS.gene056339	MS.gene50522	PPI
MS.gene056339	MS.gene28848	PPI
MS.gene056339	MS.gene008162	PPI
MS.gene056339	MS.gene08694	PPI
MS.gene056339	MS.gene63482	PPI
MS.gene056339	MS.gene63403	PPI
MS.gene056339	MS.gene52742	PPI
MS.gene056339	MS.gene04700	PPI
MS.gene056339	MS.gene31507	PPI
MS.gene056339	MS.gene28847	PPI
MS.gene056339	MS.gene08695	PPI
MS.gene056339	MS.gene008161	PPI
MS.gene056339	MS.gene006999	PPI
MS.gene056339	MS.gene073684	PPI
MS.gene056339	MS.gene050432	PPI
MS.gene056339	MS.gene007006	PPI
MS.gene056339	MS.gene62194	PPI
MS.gene056339	MS.gene62187	PPI
MS.gene056339	MS.gene42856	PPI
MS.gene056339	MS.gene23019	PPI
MS.gene056339	MS.gene03319	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene056339.t1	MTR_4g066050	85.659	258	35	2	1	257	1	257	2.77e-162	450
MS.gene056339.t1	MTR_4g070490	77.132	258	57	2	1	257	1	257	1.23e-139	392
MS.gene056339.t1	MTR_4g134660	78.481	237	49	1	21	257	3	237	2.68e-136	383
MS.gene056339.t1	MTR_4g070500	68.093	257	41	2	1	257	1	216	1.32e-103	300
MS.gene056339.t1	MTR_7g080410	30.102	196	125	5	26	215	40	229	2.68e-16	77.0
MS.gene056339.t1	MTR_7g080410	30.102	196	125	5	26	215	40	229	3.42e-16	77.0
MS.gene056339.t1	MTR_3g085740	30.052	193	127	6	29	219	80	266	1.16e-14	72.8
MS.gene056339.t1	MTR_3g068085	31.609	174	114	2	28	201	19	187	2.41e-14	71.2
MS.gene056339.t1	MTR_4g131740	28.125	192	124	5	27	210	43	228	1.04e-13	69.7
MS.gene056339.t1	MTR_3g068070	30.460	174	116	2	28	201	19	187	1.13e-12	66.6
MS.gene056339.t1	MTR_7g071680	30.198	202	125	7	27	222	32	223	1.17e-12	67.0
MS.gene056339.t1	MTR_7g094510	27.136	199	134	6	26	218	8	201	1.58e-12	65.9
MS.gene056339.t1	MTR_8g044240	31.841	201	123	8	29	220	74	269	6.39e-12	65.1
MS.gene056339.t1	MTR_4g058840	29.213	178	117	4	27	199	14	187	1.80e-11	63.2
MS.gene056339.t1	MTR_4g058820	29.213	178	117	4	27	199	14	187	1.80e-11	63.2
MS.gene056339.t1	MTR_3g087850	27.016	248	155	11	22	257	24	257	1.87e-11	63.2
MS.gene056339.t1	MTR_7g083870	29.108	213	131	6	21	230	32	227	3.22e-11	62.8
MS.gene056339.t1	MTR_4g058810	29.213	178	117	4	27	199	14	187	3.29e-11	62.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene056339.t1	AT1G10310	67.532	231	69	3	27	257	18	242	3.26e-113	325
MS.gene056339.t1	AT5G18210	29.268	205	131	5	23	218	7	206	1.80e-15	74.3
MS.gene056339.t1	AT5G18210	29.353	201	128	5	27	218	11	206	2.70e-15	73.9
MS.gene056339.t1	AT3G51680	27.723	202	136	5	27	222	35	232	1.46e-14	72.4
MS.gene056339.t1	AT5G65205	28.631	241	138	10	23	248	5	226	6.90e-14	70.1
MS.gene056339.t1	AT5G10050	29.237	236	143	9	29	253	10	232	7.18e-14	70.1
MS.gene056339.t1	AT1G07440	28.426	197	135	3	27	222	15	206	2.95e-13	68.2
MS.gene056339.t1	AT3G03980	27.805	205	130	7	27	218	17	216	5.48e-13	67.4
MS.gene056339.t1	AT1G24470	29.075	227	136	8	30	243	56	270	1.54e-12	66.6
MS.gene056339.t1	AT1G63380	25.108	231	147	8	26	246	17	231	7.39e-12	64.3
MS.gene056339.t1	AT1G63380	25.108	231	147	8	26	246	24	238	7.58e-12	64.3
MS.gene056339.t1	AT1G63380	25.108	231	147	8	26	246	19	233	8.68e-12	64.3
MS.gene056339.t1	AT1G63380	25.108	231	147	8	26	246	21	235	9.98e-12	63.9
MS.gene056339.t1	AT1G62610	25.541	231	146	8	26	246	15	229	1.03e-11	63.9
MS.gene056339.t1	AT1G62610	25.541	231	146	8	26	246	17	231	1.04e-11	63.9
MS.gene056339.t1	AT1G62610	25.541	231	146	8	26	246	21	235	1.08e-11	63.9
MS.gene056339.t1	AT1G62610	25.541	231	146	8	26	246	16	230	1.12e-11	63.9
MS.gene056339.t1	AT2G29370	31.395	172	111	3	28	198	20	185	2.65e-11	62.8
MS.gene056339.t1	AT2G17845	28.333	180	121	4	26	199	49	226	2.86e-11	62.8
MS.gene056339.t1	AT3G03330	26.804	194	133	3	27	215	44	233	6.04e-11	62.0
MS.gene056339.t1	AT2G29310	29.843	191	128	3	28	217	11	196	9.41e-11	60.1

Find 76 sgRNAs with CRISPR-Local

Find 78 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCTCCCTTCATTCTTGTTCT+TGG	0.142798	4.1:-34833694	None:intergenic
GCCTCCGAAGCCCATGATTC+TGG	0.154630	4.1:-34833930	None:intergenic
TGTTGGTAAGTTGAGATTTA+AGG	0.203062	4.1:-34833431	None:intergenic
ATCCAAATGGGAATTGTAAT+AGG	0.285630	4.1:+34833276	MS.gene056339:CDS
TATTGCTCATTGTCGATATT+AGG	0.315502	4.1:+34833469	MS.gene056339:CDS
GAGGCACTTCATTCCTTTGA+TGG	0.346468	4.1:+34833668	MS.gene056339:CDS
GAGTCCTTCAATTGCCCATT+TGG	0.366723	4.1:-34833787	None:intergenic
AGTGAGAGAGGCAAAGGAAA+AGG	0.368753	4.1:+34833252	MS.gene056339:CDS
CCTCCGAAGCCCATGATTCT+GGG	0.369639	4.1:-34833929	None:intergenic
AGTAAACATGTCTTCAGGTT+GGG	0.381329	4.1:+34833725	MS.gene056339:CDS
AAAGATGGCGCACATTGTTA+TGG	0.383417	4.1:+34833509	MS.gene056339:CDS
GCGCTGTTCACTATAATATC+TGG	0.387031	4.1:-34833549	None:intergenic
CACCTTACTGTGCATCCAAA+TGG	0.392499	4.1:+34833772	MS.gene056339:CDS
TCCCTATTACAATTCCCATT+TGG	0.393025	4.1:-34833278	None:intergenic
TCCGTCTGAAGAGTTTGATT+TGG	0.400438	4.1:+34833608	MS.gene056339:CDS
ATCACGAGAACATCCGATAA+TGG	0.402820	4.1:-34833391	None:intergenic
AATCGCGGCCACACCATTAT+CGG	0.404422	4.1:+34833378	MS.gene056339:CDS
ATCATAGTAAACATGTCTTC+AGG	0.407250	4.1:+34833720	MS.gene056339:CDS
AATCGAACAGTGATGATAAC+TGG	0.424427	4.1:+34833312	MS.gene056339:CDS
TTTATCAATCCCCAGAATCA+TGG	0.444345	4.1:+34833919	MS.gene056339:CDS
GCCACCACTGCCATTCCTTT+AGG	0.452643	4.1:-34833834	None:intergenic
TCTTCAGGTTGGGGAAGATC+AGG	0.455457	4.1:+34833735	MS.gene056339:CDS
GACATGCTTGCTTCTTGCTA+TGG	0.456004	4.1:+34833882	MS.gene056339:CDS
TAGATGATGGTTGTTGTTGT+TGG	0.461966	4.1:-34833448	None:intergenic
ATCCCCAGAATCATGGGCTT+CGG	0.464636	4.1:+34833926	MS.gene056339:CDS
AGTGAGAGTGAGAGAGGCAA+AGG	0.465606	4.1:+34833246	MS.gene056339:CDS
TCCAAATGGGAATTGTAATA+GGG	0.467185	4.1:+34833277	MS.gene056339:CDS
ACCTTACTGTGCATCCAAAT+GGG	0.476537	4.1:+34833773	MS.gene056339:CDS
TTGTTCTTGGTGACCATCAA+AGG	0.483001	4.1:-34833681	None:intergenic
GCCCATTTGGATGCACAGTA+AGG	0.483011	4.1:-34833774	None:intergenic
AGAGTTGGATTGGAGATGGC+TGG	0.483465	4.1:+34833222	None:intergenic
GCATCCAAATGGGCAATTGA+AGG	0.492681	4.1:+34833783	MS.gene056339:CDS
CAATAACAACATTGAAAAGA+TGG	0.496397	4.1:+34833494	MS.gene056339:CDS
AAGAACAAGAATGAAGGGAG+AGG	0.501576	4.1:+34833696	MS.gene056339:CDS
AAAGGAAAAGGGATCCAAAT+GGG	0.506918	4.1:+34833264	MS.gene056339:CDS
TTATCAATCCCCAGAATCAT+GGG	0.513090	4.1:+34833920	MS.gene056339:CDS
GTCACCAAGAACAAGAATGA+AGG	0.523351	4.1:+34833690	MS.gene056339:CDS
GTAAACATGTCTTCAGGTTG+GGG	0.529641	4.1:+34833726	MS.gene056339:CDS
ATGTCAGTGTTGATGACTCT+TGG	0.531536	4.1:-34833864	None:intergenic
GTGTTAGCAAAGGCCTCGGA+AGG	0.533687	4.1:+34833334	MS.gene056339:CDS
GTGAGAGAGGCAAAGGAAAA+GGG	0.536003	4.1:+34833253	MS.gene056339:CDS
TAGTAAACATGTCTTCAGGT+TGG	0.548459	4.1:+34833724	MS.gene056339:CDS
CAAAGGAAAAGGGATCCAAA+TGG	0.549091	4.1:+34833263	MS.gene056339:CDS
CAACTCTTCAGCAACAGACT+TGG	0.549133	4.1:-34833811	None:intergenic
CGACAATGAGCAATAGATGA+TGG	0.549443	4.1:-34833461	None:intergenic
GTGATGGATACCAACTTGAA+AGG	0.549556	4.1:+34833630	MS.gene056339:CDS
ACTGGTGTTAGCAAAGGCCT+CGG	0.553011	4.1:+34833330	MS.gene056339:CDS
GCCTAAAGGAATGGCAGTGG+TGG	0.559230	4.1:+34833833	MS.gene056339:CDS
GATATTATAGTGAACAGCGC+TGG	0.564528	4.1:+34833552	MS.gene056339:CDS
TGAAGAGTTTGATTTGGTGA+TGG	0.564985	4.1:+34833614	MS.gene056339:CDS
ATTGGCAGTACCTTTCAAGT+TGG	0.566483	4.1:-34833640	None:intergenic
CCCAGAATCATGGGCTTCGG+AGG	0.572981	4.1:+34833929	MS.gene056339:CDS
ACCAAATCAAACTCTTCAGA+CGG	0.574076	4.1:-34833609	None:intergenic
AGGTGTAAGATTGAGTATCT+TGG	0.574117	4.1:-34833958	None:intergenic
GTTGCTGAAGAGTTGCCTAA+AGG	0.577379	4.1:+34833819	MS.gene056339:CDS
TTAACAAGAACAACAAGATG+TGG	0.581720	4.1:+34833580	MS.gene056339:CDS
GCTGGTAGTGAGAGTGAGAG+AGG	0.586966	4.1:+34833240	MS.gene056339:CDS
CTCCGAAGCCCATGATTCTG+GGG	0.593057	4.1:-34833928	None:intergenic
TGAAGAGTTGCCTAAAGGAA+TGG	0.601209	4.1:+34833824	MS.gene056339:CDS
ATGATAACTGGTGTTAGCAA+AGG	0.602573	4.1:+34833324	MS.gene056339:CDS
AGAGAAGCACCATTGTCTGT+AGG	0.608513	4.1:-34833978	None:intergenic
AGAACAAGAATGAAGGGAGA+GGG	0.608978	4.1:+34833697	MS.gene056339:CDS
TCACCAAGAACAAGAATGAA+GGG	0.611804	4.1:+34833691	MS.gene056339:CDS
AATGAAGTGCCTCAACACAT+TGG	0.620714	4.1:-34833658	None:intergenic
TAACAAGAACAACAAGATGT+GGG	0.626572	4.1:+34833581	MS.gene056339:CDS
CTGTTCACTATAATATCTGG+TGG	0.627400	4.1:-34833546	None:intergenic
TGTAAGATTGAGTATCTTGG+TGG	0.630553	4.1:-34833955	None:intergenic
GTTGCCTAAAGGAATGGCAG+TGG	0.632507	4.1:+34833830	MS.gene056339:CDS
AATCTTACACCTACAGACAA+TGG	0.649751	4.1:+34833969	MS.gene056339:CDS
GCGATTGAATTAGCTAATCG+CGG	0.653813	4.1:+34833363	MS.gene056339:CDS
CAATCGCAAGAGCCCTTCCG+AGG	0.659123	4.1:-34833347	None:intergenic
ATTGTAATAGGGAAGAGTGA+AGG	0.660289	4.1:+34833288	MS.gene056339:CDS
GAGAACATCCGATAATGGTG+TGG	0.672735	4.1:-34833386	None:intergenic
TGTTAGCAAAGGCCTCGGAA+GGG	0.679393	4.1:+34833335	MS.gene056339:CDS
CAAGAACAACAAGATGTGGG+AGG	0.691847	4.1:+34833584	MS.gene056339:CDS
AAGGTACTGCCAATGTGTTG+AGG	0.753722	4.1:+34833649	MS.gene056339:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	CAATAACAACATTGAAAAGA+TGG	+	chr4.1:34833494-34833513	MS.gene056339:CDS	25.0%
!!	CATCTTTTCAATGTTGTTAT+TGG	-	chr4.1:34833496-34833515	None:intergenic	25.0%
	ATCATAGTAAACATGTCTTC+AGG	+	chr4.1:34833720-34833739	MS.gene056339:CDS	30.0%
	ATCCAAATGGGAATTGTAAT+AGG	+	chr4.1:34833276-34833295	MS.gene056339:CDS	30.0%
	ATTGTTATGGAGAAAAAAGG+AGG	+	chr4.1:34833522-34833541	MS.gene056339:CDS	30.0%
	CACATTGTTATGGAGAAAAA+AGG	+	chr4.1:34833519-34833538	MS.gene056339:CDS	30.0%
	TAACAAGAACAACAAGATGT+GGG	+	chr4.1:34833581-34833600	MS.gene056339:CDS	30.0%
	TATTGCTCATTGTCGATATT+AGG	+	chr4.1:34833469-34833488	MS.gene056339:CDS	30.0%
	TCCAAATGGGAATTGTAATA+GGG	+	chr4.1:34833277-34833296	MS.gene056339:CDS	30.0%
	TTAACAAGAACAACAAGATG+TGG	+	chr4.1:34833580-34833599	MS.gene056339:CDS	30.0%
!	TGTTGGTAAGTTGAGATTTA+AGG	-	chr4.1:34833434-34833453	None:intergenic	30.0%
	AAAGGAAAAGGGATCCAAAT+GGG	+	chr4.1:34833264-34833283	MS.gene056339:CDS	35.0%
	AATCGAACAGTGATGATAAC+TGG	+	chr4.1:34833312-34833331	MS.gene056339:CDS	35.0%
	AATCTTACACCTACAGACAA+TGG	+	chr4.1:34833969-34833988	MS.gene056339:CDS	35.0%
	ACCAAATCAAACTCTTCAGA+CGG	-	chr4.1:34833612-34833631	None:intergenic	35.0%
	AGGTGTAAGATTGAGTATCT+TGG	-	chr4.1:34833961-34833980	None:intergenic	35.0%
	ATTGTAATAGGGAAGAGTGA+AGG	+	chr4.1:34833288-34833307	MS.gene056339:CDS	35.0%
	CTGTTCACTATAATATCTGG+TGG	-	chr4.1:34833549-34833568	None:intergenic	35.0%
	TAGTAAACATGTCTTCAGGT+TGG	+	chr4.1:34833724-34833743	MS.gene056339:CDS	35.0%
	TCACCAAGAACAAGAATGAA+GGG	+	chr4.1:34833691-34833710	MS.gene056339:CDS	35.0%
	TCCCTATTACAATTCCCATT+TGG	-	chr4.1:34833281-34833300	None:intergenic	35.0%
	TGTAAGATTGAGTATCTTGG+TGG	-	chr4.1:34833958-34833977	None:intergenic	35.0%
	TTATCAATCCCCAGAATCAT+GGG	+	chr4.1:34833920-34833939	MS.gene056339:CDS	35.0%
	TTTATCAATCCCCAGAATCA+TGG	+	chr4.1:34833919-34833938	MS.gene056339:CDS	35.0%
!	AGTAAACATGTCTTCAGGTT+GGG	+	chr4.1:34833725-34833744	MS.gene056339:CDS	35.0%
!	ATGATAACTGGTGTTAGCAA+AGG	+	chr4.1:34833324-34833343	MS.gene056339:CDS	35.0%
!	TAGATGATGGTTGTTGTTGT+TGG	-	chr4.1:34833451-34833470	None:intergenic	35.0%
!!	TGAAGAGTTTGATTTGGTGA+TGG	+	chr4.1:34833614-34833633	MS.gene056339:CDS	35.0%
	AAAGATGGCGCACATTGTTA+TGG	+	chr4.1:34833509-34833528	MS.gene056339:CDS	40.0%
	AAGAACAAGAATGAAGGGAG+AGG	+	chr4.1:34833696-34833715	MS.gene056339:CDS	40.0%
	ACCTTACTGTGCATCCAAAT+GGG	+	chr4.1:34833773-34833792	MS.gene056339:CDS	40.0%
	AGAACAAGAATGAAGGGAGA+GGG	+	chr4.1:34833697-34833716	MS.gene056339:CDS	40.0%
	ATCACGAGAACATCCGATAA+TGG	-	chr4.1:34833394-34833413	None:intergenic	40.0%
	CAAAGGAAAAGGGATCCAAA+TGG	+	chr4.1:34833263-34833282	MS.gene056339:CDS	40.0%
	CGACAATGAGCAATAGATGA+TGG	-	chr4.1:34833464-34833483	None:intergenic	40.0%
	GATATTATAGTGAACAGCGC+TGG	+	chr4.1:34833552-34833571	MS.gene056339:CDS	40.0%
	GCGATTGAATTAGCTAATCG+CGG	+	chr4.1:34833363-34833382	MS.gene056339:CDS	40.0%
	GCGCTGTTCACTATAATATC+TGG	-	chr4.1:34833552-34833571	None:intergenic	40.0%
	GTCACCAAGAACAAGAATGA+AGG	+	chr4.1:34833690-34833709	MS.gene056339:CDS	40.0%
	TCCGTCTGAAGAGTTTGATT+TGG	+	chr4.1:34833608-34833627	MS.gene056339:CDS	40.0%
	TCTCCCTTCATTCTTGTTCT+TGG	-	chr4.1:34833697-34833716	None:intergenic	40.0%
	TGAAGAGTTGCCTAAAGGAA+TGG	+	chr4.1:34833824-34833843	MS.gene056339:CDS	40.0%
!	AATGAAGTGCCTCAACACAT+TGG	-	chr4.1:34833661-34833680	None:intergenic	40.0%
!	ATTGGCAGTACCTTTCAAGT+TGG	-	chr4.1:34833643-34833662	None:intergenic	40.0%
!	TTGTTCTTGGTGACCATCAA+AGG	-	chr4.1:34833684-34833703	None:intergenic	40.0%
!!	ATGTCAGTGTTGATGACTCT+TGG	-	chr4.1:34833867-34833886	None:intergenic	40.0%
!!	GTAAACATGTCTTCAGGTTG+GGG	+	chr4.1:34833726-34833745	MS.gene056339:CDS	40.0%
!!	GTGATGGATACCAACTTGAA+AGG	+	chr4.1:34833630-34833649	MS.gene056339:CDS	40.0%
	AGTGAGAGAGGCAAAGGAAA+AGG	+	chr4.1:34833252-34833271	MS.gene056339:CDS	45.0%
	CAACTCTTCAGCAACAGACT+TGG	-	chr4.1:34833814-34833833	None:intergenic	45.0%
	CAAGAACAACAAGATGTGGG+AGG	+	chr4.1:34833584-34833603	MS.gene056339:CDS	45.0%
	CACCTTACTGTGCATCCAAA+TGG	+	chr4.1:34833772-34833791	MS.gene056339:CDS	45.0%
	GACATGCTTGCTTCTTGCTA+TGG	+	chr4.1:34833882-34833901	MS.gene056339:CDS	45.0%
	GAGTCCTTCAATTGCCCATT+TGG	-	chr4.1:34833790-34833809	None:intergenic	45.0%
	GCATCCAAATGGGCAATTGA+AGG	+	chr4.1:34833783-34833802	MS.gene056339:CDS	45.0%
	GTGAGAGAGGCAAAGGAAAA+GGG	+	chr4.1:34833253-34833272	MS.gene056339:CDS	45.0%
	GTTGCTGAAGAGTTGCCTAA+AGG	+	chr4.1:34833819-34833838	MS.gene056339:CDS	45.0%
!	GAGAACATCCGATAATGGTG+TGG	-	chr4.1:34833389-34833408	None:intergenic	45.0%
!	GAGGCACTTCATTCCTTTGA+TGG	+	chr4.1:34833668-34833687	MS.gene056339:CDS	45.0%
!!	AAGGTACTGCCAATGTGTTG+AGG	+	chr4.1:34833649-34833668	MS.gene056339:CDS	45.0%
!!	AGAGAAGCACCATTGTCTGT+AGG	-	chr4.1:34833981-34834000	None:intergenic	45.0%
	AATCGCGGCCACACCATTAT+CGG	+	chr4.1:34833378-34833397	MS.gene056339:CDS	50.0%
	AGTGAGAGTGAGAGAGGCAA+AGG	+	chr4.1:34833246-34833265	MS.gene056339:CDS	50.0%
	ATCCCCAGAATCATGGGCTT+CGG	+	chr4.1:34833926-34833945	MS.gene056339:CDS	50.0%
	GCCCATTTGGATGCACAGTA+AGG	-	chr4.1:34833777-34833796	None:intergenic	50.0%
	GTTGCCTAAAGGAATGGCAG+TGG	+	chr4.1:34833830-34833849	MS.gene056339:CDS	50.0%
	TGTTAGCAAAGGCCTCGGAA+GGG	+	chr4.1:34833335-34833354	MS.gene056339:CDS	50.0%
!	ACTGGTGTTAGCAAAGGCCT+CGG	+	chr4.1:34833330-34833349	MS.gene056339:CDS	50.0%
!!	TCTTCAGGTTGGGGAAGATC+AGG	+	chr4.1:34833735-34833754	MS.gene056339:CDS	50.0%
	CCTCCGAAGCCCATGATTCT+GGG	-	chr4.1:34833932-34833951	None:intergenic	55.0%
	CTCCGAAGCCCATGATTCTG+GGG	-	chr4.1:34833931-34833950	None:intergenic	55.0%
	GCCACCACTGCCATTCCTTT+AGG	-	chr4.1:34833837-34833856	None:intergenic	55.0%
	GCCTAAAGGAATGGCAGTGG+TGG	+	chr4.1:34833833-34833852	MS.gene056339:CDS	55.0%
	GTGTTAGCAAAGGCCTCGGA+AGG	+	chr4.1:34833334-34833353	MS.gene056339:CDS	55.0%
!	GCTGGTAGTGAGAGTGAGAG+AGG	+	chr4.1:34833240-34833259	MS.gene056339:CDS	55.0%
	CAATCGCAAGAGCCCTTCCG+AGG	-	chr4.1:34833350-34833369	None:intergenic	60.0%
	CCCAGAATCATGGGCTTCGG+AGG	+	chr4.1:34833929-34833948	MS.gene056339:CDS	60.0%
	GCCTCCGAAGCCCATGATTC+TGG	-	chr4.1:34833933-34833952	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.1	gene	34833237	34834010	34833237	ID=MS.gene056339
chr4.1	mRNA	34833237	34834010	34833237	ID=MS.gene056339.t1;Parent=MS.gene056339
chr4.1	exon	34833237	34834010	34833237	ID=MS.gene056339.t1.exon1;Parent=MS.gene056339.t1
chr4.1	CDS	34833237	34834010	34833237	ID=cds.MS.gene056339.t1;Parent=MS.gene056339.t1

Gene Sequence

>MS.gene056339

ATGGCTGGTAGTGAGAGTGAGAGAGGCAAAGGAAAAGGGATCCAAATGGGAATTGTAATAGGGAAGAGTGAAGGAAATCGAACAGTGATGATAACTGGTGTTAGCAAAGGCCTCGGAAGGGCTCTTGCGATTGAATTAGCTAATCGCGGCCACACCATTATCGGATGTTCTCGTGATCATGATAAGCTCGAATTCCTTAAATCTCAACTTACCAACAACAACAACCATCATCTATTGCTCATTGTCGATATTAGGTCCAATAACAACATTGAAAAGATGGCGCACATTGTTATGGAGAAAAAAGGAGGTCCACCAGATATTATAGTGAACAGCGCTGGAATCATTAACAAGAACAACAAGATGTGGGAGGTTCCGTCTGAAGAGTTTGATTTGGTGATGGATACCAACTTGAAAGGTACTGCCAATGTGTTGAGGCACTTCATTCCTTTGATGGTCACCAAGAACAAGAATGAAGGGAGAGGGATCATAGTAAACATGTCTTCAGGTTGGGGAAGATCAGGTACAGCACTTGTAGCACCTTACTGTGCATCCAAATGGGCAATTGAAGGACTCACCAAGTCTGTTGCTGAAGAGTTGCCTAAAGGAATGGCAGTGGTGGCACTCAATCCAAGAGTCATCAACACTGACATGCTTGCTTCTTGCTATGGTGTTTCTTCATCTCTTTATCAATCCCCAGAATCATGGGCTTCGGAGGCAGCCACCAAGATACTCAATCTTACACCTACAGACAATGGTGCTTCTCTCTCTATTTGA

Protein sequence

>MS.gene056339.t1

MAGSESERGKGKGIQMGIVIGKSEGNRTVMITGVSKGLGRALAIELANRGHTIIGCSRDHDKLEFLKSQLTNNNNHHLLLIVDIRSNNNIEKMAHIVMEKKGGPPDIIVNSAGIINKNNKMWEVPSEEFDLVMDTNLKGTANVLRHFIPLMVTKNKNEGRGIIVNMSSGWGRSGTALVAPYCASKWAIEGLTKSVAEELPKGMAVVALNPRVINTDMLASCYGVSSSLYQSPESWASEAATKILNLTPTDNGASLSI