Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69937.t1 | GAU21457.1 | 82.8 | 134 | 23 | 0 | 1 | 134 | 1 | 134 | 1.90E-46 | 195.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69937.t1 | Q9XH46 | 81.8 | 137 | 24 | 1 | 1 | 136 | 1 | 137 | 1.3e-48 | 193.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69937.t1 | A0A2Z6MXB2 | 82.8 | 134 | 23 | 0 | 1 | 134 | 1 | 134 | 1.3e-46 | 195.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049351 | MS.gene69937 | 0.815636 | 8.35E-52 | -1.69E-46 |
MS.gene049389 | MS.gene69937 | 0.801693 | 7.98E-49 | -1.69E-46 |
MS.gene049427 | MS.gene69937 | 0.836742 | 7.83E-57 | -1.69E-46 |
MS.gene049491 | MS.gene69937 | 0.836532 | 8.85E-57 | -1.69E-46 |
MS.gene049661 | MS.gene69937 | 0.833516 | 5.10E-56 | -1.69E-46 |
MS.gene049662 | MS.gene69937 | 0.830175 | 3.41E-55 | -1.69E-46 |
MS.gene049758 | MS.gene69937 | 0.826305 | 2.92E-54 | -1.69E-46 |
MS.gene049760 | MS.gene69937 | 0.820515 | 6.59E-53 | -1.69E-46 |
MS.gene049805 | MS.gene69937 | 0.821505 | 3.90E-53 | -1.69E-46 |
MS.gene050076 | MS.gene69937 | 0.903878 | 2.20E-79 | -1.69E-46 |
MS.gene050301 | MS.gene69937 | 0.855631 | 5.54E-62 | -1.69E-46 |
MS.gene050397 | MS.gene69937 | 0.856573 | 2.94E-62 | -1.69E-46 |
MS.gene050406 | MS.gene69937 | 0.818074 | 2.37E-52 | -1.69E-46 |
MS.gene050432 | MS.gene69937 | 0.89351 | 5.88E-75 | -1.69E-46 |
MS.gene050464 | MS.gene69937 | 0.852257 | 5.20E-61 | -1.69E-46 |
MS.gene050529 | MS.gene69937 | 0.854487 | 1.19E-61 | -1.69E-46 |
MS.gene050593 | MS.gene69937 | 0.813748 | 2.19E-51 | -1.69E-46 |
MS.gene050670 | MS.gene69937 | 0.829002 | 6.57E-55 | -1.69E-46 |
MS.gene050767 | MS.gene69937 | 0.847847 | 8.92E-60 | -1.69E-46 |
MS.gene050770 | MS.gene69937 | 0.846835 | 1.69E-59 | -1.69E-46 |
MS.gene050783 | MS.gene69937 | 0.835575 | 1.55E-56 | -1.69E-46 |
MS.gene05101 | MS.gene69937 | 0.88838 | 6.22E-73 | -1.69E-46 |
MS.gene05105 | MS.gene69937 | 0.830377 | 3.04E-55 | -1.69E-46 |
MS.gene051387 | MS.gene69937 | 0.841024 | 6.11E-58 | -1.69E-46 |
MS.gene051471 | MS.gene69937 | 0.842259 | 2.88E-58 | -1.69E-46 |
MS.gene051582 | MS.gene69937 | 0.836992 | 6.76E-57 | -1.69E-46 |
MS.gene051666 | MS.gene69937 | 0.819005 | 1.46E-52 | -1.69E-46 |
MS.gene051877 | MS.gene69937 | 0.812992 | 3.21E-51 | -1.69E-46 |
MS.gene052078 | MS.gene69937 | 0.869218 | 3.65E-66 | -1.69E-46 |
MS.gene052178 | MS.gene69937 | 0.823213 | 1.56E-53 | -1.69E-46 |
MS.gene052188 | MS.gene69937 | 0.810705 | 1.01E-50 | -1.69E-46 |
MS.gene052253 | MS.gene69937 | 0.803561 | 3.29E-49 | -1.69E-46 |
MS.gene052290 | MS.gene69937 | 0.82805 | 1.12E-54 | -1.69E-46 |
MS.gene052310 | MS.gene69937 | 0.874458 | 6.65E-68 | -1.69E-46 |
MS.gene052322 | MS.gene69937 | 0.814097 | 1.83E-51 | -1.69E-46 |
MS.gene052326 | MS.gene69937 | 0.864564 | 1.11E-64 | -1.69E-46 |
MS.gene052340 | MS.gene69937 | 0.834876 | 2.33E-56 | -1.69E-46 |
MS.gene052379 | MS.gene69937 | 0.806817 | 6.84E-50 | -1.69E-46 |
MS.gene052421 | MS.gene69937 | 0.819133 | 1.36E-52 | -1.69E-46 |
MS.gene052481 | MS.gene69937 | 0.812486 | 4.14E-51 | -1.69E-46 |
MS.gene052484 | MS.gene69937 | 0.810058 | 1.39E-50 | -1.69E-46 |
MS.gene052485 | MS.gene69937 | 0.802186 | 6.32E-49 | -1.69E-46 |
MS.gene053103 | MS.gene69937 | 0.872326 | 3.46E-67 | -1.69E-46 |
MS.gene053104 | MS.gene69937 | 0.85417 | 1.47E-61 | -1.69E-46 |
MS.gene053207 | MS.gene69937 | 0.812683 | 3.75E-51 | -1.69E-46 |
MS.gene053209 | MS.gene69937 | 0.874078 | 8.94E-68 | -1.69E-46 |
MS.gene053322 | MS.gene69937 | 0.852016 | 6.08E-61 | -1.69E-46 |
MS.gene053557 | MS.gene69937 | 0.824352 | 8.46E-54 | -1.69E-46 |
MS.gene053836 | MS.gene69937 | 0.846497 | 2.09E-59 | -1.69E-46 |
MS.gene054123 | MS.gene69937 | 0.808204 | 3.47E-50 | -1.69E-46 |
MS.gene054376 | MS.gene69937 | 0.874693 | 5.53E-68 | -1.69E-46 |
MS.gene05455 | MS.gene69937 | 0.811908 | 5.53E-51 | -1.69E-46 |
MS.gene054802 | MS.gene69937 | 0.831607 | 1.52E-55 | -1.69E-46 |
MS.gene054803 | MS.gene69937 | 0.830035 | 3.68E-55 | -1.69E-46 |
MS.gene054804 | MS.gene69937 | 0.834482 | 2.92E-56 | -1.69E-46 |
MS.gene055116 | MS.gene69937 | 0.85524 | 7.20E-62 | -1.69E-46 |
MS.gene055254 | MS.gene69937 | 0.833249 | 5.95E-56 | -1.69E-46 |
MS.gene055277 | MS.gene69937 | 0.901878 | 1.72E-78 | -1.69E-46 |
MS.gene055390 | MS.gene69937 | 0.807498 | 4.91E-50 | -1.69E-46 |
MS.gene055397 | MS.gene69937 | 0.814811 | 1.27E-51 | -1.69E-46 |
MS.gene055412 | MS.gene69937 | 0.803862 | 2.85E-49 | -1.69E-46 |
MS.gene055422 | MS.gene69937 | 0.860327 | 2.23E-63 | -1.69E-46 |
MS.gene055428 | MS.gene69937 | 0.884277 | 2.20E-71 | -1.69E-46 |
MS.gene055499 | MS.gene69937 | 0.813243 | 2.83E-51 | -1.69E-46 |
MS.gene05553 | MS.gene69937 | 0.800367 | 1.49E-48 | -1.69E-46 |
MS.gene055647 | MS.gene69937 | 0.827374 | 1.62E-54 | -1.69E-46 |
MS.gene055712 | MS.gene69937 | 0.805916 | 1.06E-49 | -1.69E-46 |
MS.gene055896 | MS.gene69937 | 0.812667 | 3.78E-51 | -1.69E-46 |
MS.gene05592 | MS.gene69937 | 0.82805 | 1.11E-54 | -1.69E-46 |
MS.gene056191 | MS.gene69937 | 0.831803 | 1.36E-55 | -1.69E-46 |
MS.gene056407 | MS.gene69937 | 0.879315 | 1.38E-69 | -1.69E-46 |
MS.gene056410 | MS.gene69937 | 0.83528 | 1.84E-56 | -1.69E-46 |
MS.gene056511 | MS.gene69937 | 0.803498 | 3.39E-49 | -1.69E-46 |
MS.gene056609 | MS.gene69937 | 0.844757 | 6.20E-59 | -1.69E-46 |
MS.gene056612 | MS.gene69937 | 0.858565 | 7.55E-63 | -1.69E-46 |
MS.gene056796 | MS.gene69937 | 0.817721 | 2.85E-52 | -1.69E-46 |
MS.gene057011 | MS.gene69937 | 0.853121 | 2.95E-61 | -1.69E-46 |
MS.gene05702 | MS.gene69937 | 0.875876 | 2.18E-68 | -1.69E-46 |
MS.gene057123 | MS.gene69937 | 0.853147 | 2.90E-61 | -1.69E-46 |
MS.gene057129 | MS.gene69937 | 0.825383 | 4.83E-54 | -1.69E-46 |
MS.gene057146 | MS.gene69937 | 0.834804 | 2.42E-56 | -1.69E-46 |
MS.gene057196 | MS.gene69937 | 0.800381 | 1.48E-48 | -1.69E-46 |
MS.gene057295 | MS.gene69937 | 0.837346 | 5.49E-57 | -1.69E-46 |
MS.gene057331 | MS.gene69937 | 0.806118 | 9.61E-50 | -1.69E-46 |
MS.gene05733 | MS.gene69937 | 0.802889 | 4.53E-49 | -1.69E-46 |
MS.gene057416 | MS.gene69937 | 0.838068 | 3.58E-57 | -1.69E-46 |
MS.gene057439 | MS.gene69937 | 0.809064 | 2.28E-50 | -1.69E-46 |
MS.gene057450 | MS.gene69937 | 0.802604 | 5.18E-49 | -1.69E-46 |
MS.gene057749 | MS.gene69937 | 0.827433 | 1.57E-54 | -1.69E-46 |
MS.gene057823 | MS.gene69937 | 0.819278 | 1.26E-52 | -1.69E-46 |
MS.gene058002 | MS.gene69937 | 0.839716 | 1.34E-57 | -1.69E-46 |
MS.gene058019 | MS.gene69937 | 0.845822 | 3.19E-59 | -1.69E-46 |
MS.gene058082 | MS.gene69937 | 0.807452 | 5.02E-50 | -1.69E-46 |
MS.gene05811 | MS.gene69937 | 0.811419 | 7.07E-51 | -1.69E-46 |
MS.gene058233 | MS.gene69937 | 0.844834 | 5.91E-59 | -1.69E-46 |
MS.gene058293 | MS.gene69937 | 0.873566 | 1.33E-67 | -1.69E-46 |
MS.gene058365 | MS.gene69937 | 0.812408 | 4.30E-51 | -1.69E-46 |
MS.gene058660 | MS.gene69937 | 0.882655 | 8.68E-71 | -1.69E-46 |
MS.gene05886 | MS.gene69937 | 0.808122 | 3.62E-50 | -1.69E-46 |
MS.gene058928 | MS.gene69937 | 0.816602 | 5.08E-52 | -1.69E-46 |
MS.gene05907 | MS.gene69937 | 0.859647 | 3.58E-63 | -1.69E-46 |
MS.gene059326 | MS.gene69937 | 0.838116 | 3.48E-57 | -1.69E-46 |
MS.gene059518 | MS.gene69937 | 0.803306 | 3.71E-49 | -1.69E-46 |
MS.gene059536 | MS.gene69937 | 0.843212 | 1.61E-58 | -1.69E-46 |
MS.gene059597 | MS.gene69937 | 0.871088 | 8.92E-67 | -1.69E-46 |
MS.gene05959 | MS.gene69937 | 0.818281 | 2.13E-52 | -1.69E-46 |
MS.gene059676 | MS.gene69937 | 0.874761 | 5.25E-68 | -1.69E-46 |
MS.gene059688 | MS.gene69937 | 0.860766 | 1.64E-63 | -1.69E-46 |
MS.gene059692 | MS.gene69937 | 0.871243 | 7.93E-67 | -1.69E-46 |
MS.gene059695 | MS.gene69937 | 0.868759 | 5.14E-66 | -1.69E-46 |
MS.gene059711 | MS.gene69937 | 0.815459 | 9.14E-52 | -1.69E-46 |
MS.gene05984 | MS.gene69937 | 0.805399 | 1.36E-49 | -1.69E-46 |
MS.gene059894 | MS.gene69937 | 0.87915 | 1.58E-69 | -1.69E-46 |
MS.gene059960 | MS.gene69937 | 0.856023 | 4.26E-62 | -1.69E-46 |
MS.gene059974 | MS.gene69937 | 0.825191 | 5.36E-54 | -1.69E-46 |
MS.gene060005 | MS.gene69937 | 0.819862 | 9.29E-53 | -1.69E-46 |
MS.gene06037 | MS.gene69937 | 0.845948 | 2.95E-59 | -1.69E-46 |
MS.gene060403 | MS.gene69937 | 0.846681 | 1.86E-59 | -1.69E-46 |
MS.gene060407 | MS.gene69937 | 0.814933 | 1.20E-51 | -1.69E-46 |
MS.gene060804 | MS.gene69937 | 0.865502 | 5.64E-65 | -1.69E-46 |
MS.gene060818 | MS.gene69937 | 0.821635 | 3.63E-53 | -1.69E-46 |
MS.gene060837 | MS.gene69937 | 0.803663 | 3.13E-49 | -1.69E-46 |
MS.gene061041 | MS.gene69937 | 0.82618 | 3.12E-54 | -1.69E-46 |
MS.gene061049 | MS.gene69937 | 0.873959 | 9.81E-68 | -1.69E-46 |
MS.gene061051 | MS.gene69937 | -0.868059 | 8.65E-66 | -1.69E-46 |
MS.gene061112 | MS.gene69937 | 0.811933 | 5.46E-51 | -1.69E-46 |
MS.gene061200 | MS.gene69937 | 0.836198 | 1.08E-56 | -1.69E-46 |
MS.gene061265 | MS.gene69937 | 0.808888 | 2.48E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69937.t1 | MTR_1g080910 | 92.806 | 139 | 7 | 1 | 1 | 136 | 1 | 139 | 3.49e-75 | 220 |
MS.gene69937.t1 | MTR_1g080910 | 92.000 | 100 | 5 | 1 | 1 | 97 | 1 | 100 | 2.04e-46 | 146 |
MS.gene69937.t1 | MTR_7g115180 | 70.707 | 99 | 24 | 2 | 43 | 136 | 46 | 144 | 7.76e-41 | 133 |
MS.gene69937.t1 | MTR_7g115180 | 68.919 | 74 | 21 | 1 | 43 | 114 | 46 | 119 | 3.37e-27 | 98.2 |
MS.gene69937.t1 | MTR_1g100220 | 40.260 | 77 | 45 | 1 | 45 | 121 | 75 | 150 | 7.68e-11 | 58.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69937.t1 | AT5G28750 | 60.000 | 105 | 37 | 2 | 33 | 132 | 38 | 142 | 1.62e-37 | 125 |
MS.gene69937.t1 | AT5G52440 | 52.083 | 48 | 23 | 0 | 56 | 103 | 85 | 132 | 3.65e-11 | 59.3 |
Find 31 sgRNAs with CRISPR-Local
Find 45 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACGCTTTGTGCTTCTGTTTC+TGG | 0.042249 | 1.4:+65826261 | None:intergenic |
CCAACTTCGGGCAATTTCTT+AGG | 0.195754 | 1.4:+65826160 | None:intergenic |
TGTGCTTCTGTTTCTGGTTC+TGG | 0.214291 | 1.4:+65826267 | None:intergenic |
CATTATTGTCTTGATCTTCT+TGG | 0.219177 | 1.4:+65825725 | None:intergenic |
GAAATTTCTTCAGTAGAATT+AGG | 0.222712 | 1.4:+65825760 | None:intergenic |
CCCGAGCTTGTTGTTATTGC+AGG | 0.253511 | 1.4:-65826205 | MS.gene69937:CDS |
GCCGATGCTGCGACCAACTT+CGG | 0.342708 | 1.4:+65826147 | None:intergenic |
TTTACTTGCAACGCCTTCTT+CGG | 0.349544 | 1.4:-65826238 | MS.gene69937:CDS |
AAGTGAGGTAGTATTGGAAT+TGG | 0.350889 | 1.4:+65826303 | None:intergenic |
CCGATGCTGCGACCAACTTC+GGG | 0.355688 | 1.4:+65826148 | None:intergenic |
TAAGAAGGATAAGGTGGAAT+AGG | 0.383721 | 1.4:+65826330 | None:intergenic |
GTGGAATAGGATGAAGAGAT+TGG | 0.421445 | 1.4:+65826343 | None:intergenic |
GCGAATTAAAGAAGAAGAAA+GGG | 0.424605 | 1.4:+65826375 | None:intergenic |
CTTCTTCTTTAATTCGCCCT+AGG | 0.426973 | 1.4:-65826369 | MS.gene69937:CDS |
GGCGAATTAAAGAAGAAGAA+AGG | 0.452383 | 1.4:+65826374 | None:intergenic |
AACTGTCAAAAGCTTCCAAC+AGG | 0.455252 | 1.4:-65826122 | MS.gene69937:intron |
CCCGAAGTTGGTCGCAGCAT+CGG | 0.463383 | 1.4:-65826148 | MS.gene69937:CDS |
ATTGGAATTGGAAGCTAAGA+AGG | 0.471201 | 1.4:+65826315 | None:intergenic |
CCTAAGAAATTGCCCGAAGT+TGG | 0.474122 | 1.4:-65826160 | MS.gene69937:CDS |
CAAGAGAAGTGAGGTAGTAT+TGG | 0.479165 | 1.4:+65826297 | None:intergenic |
TGAAACCTTGTAGGCAGCAA+AGG | 0.513076 | 1.4:-65825809 | MS.gene69937:intron |
TGCAACGCCTTCTTCGGATT+AGG | 0.521226 | 1.4:-65826232 | MS.gene69937:CDS |
ATTGGAAGCTAAGAAGGATA+AGG | 0.521310 | 1.4:+65826321 | None:intergenic |
TCCTGCAATAACAACAAGCT+CGG | 0.534091 | 1.4:+65826204 | None:intergenic |
CAATAATGTTTCTAGTACAA+AGG | 0.541741 | 1.4:-65825710 | MS.gene69937:CDS |
ATGAAGAGATTGGAAGCCTA+GGG | 0.550257 | 1.4:+65826353 | None:intergenic |
GATGAAGAGATTGGAAGCCT+AGG | 0.550349 | 1.4:+65826352 | None:intergenic |
CCTGCAATAACAACAAGCTC+GGG | 0.555493 | 1.4:+65826205 | None:intergenic |
GGAAGCTAAGAAGGATAAGG+TGG | 0.578078 | 1.4:+65826324 | None:intergenic |
GGGCACGCCTAATCCGAAGA+AGG | 0.614059 | 1.4:+65826225 | None:intergenic |
GGCTTTCTTCAAGAGAAGTG+AGG | 0.628856 | 1.4:+65826288 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TAAAATTGAAATTGTTTTAT+AGG | - | chr1.4:65826154-65826173 | MS.gene69937:CDS | 10.0% |
!! | GCAATTTCTTATCTAATTAA+CGG | - | chr1.4:65826065-65826084 | MS.gene69937:intron | 20.0% |
!!! | GCAAATTTTTATTGTTTGTT+TGG | - | chr1.4:65826243-65826262 | MS.gene69937:CDS | 20.0% |
! | GAAATTTCTTCAGTAGAATT+AGG | + | chr1.4:65826333-65826352 | None:intergenic | 25.0% |
! | TTATCCTAAGAATGAGAAAA+TGG | + | chr1.4:65825996-65826015 | None:intergenic | 25.0% |
!!! | ATTAGATTTTGAAACCTTGT+AGG | - | chr1.4:65826272-65826291 | MS.gene69937:CDS | 25.0% |
!!! | ATTAGGTTCCTTTTTTAACT+CGG | + | chr1.4:65826316-65826335 | None:intergenic | 25.0% |
!!! | CAATAATGTTTCTAGTACAA+AGG | - | chr1.4:65826380-65826399 | MS.gene69937:CDS | 25.0% |
ATGTAGAACTCCTATATGTT+AGG | + | chr1.4:65826043-65826062 | None:intergenic | 30.0% | |
CATTATTGTCTTGATCTTCT+TGG | + | chr1.4:65826368-65826387 | None:intergenic | 30.0% | |
GCGAATTAAAGAAGAAGAAA+GGG | + | chr1.4:65825718-65825737 | None:intergenic | 30.0% | |
TCATTCGTTGTATTTGAATG+AGG | - | chr1.4:65826198-65826217 | MS.gene69937:CDS | 30.0% | |
!! | ATTTGTTGTGCCTAACATAT+AGG | - | chr1.4:65826030-65826049 | MS.gene69937:intron | 30.0% |
AATGAGAAAATGGAACCTGT+TGG | + | chr1.4:65825986-65826005 | None:intergenic | 35.0% | |
ATTGGAAGCTAAGAAGGATA+AGG | + | chr1.4:65825772-65825791 | None:intergenic | 35.0% | |
ATTGGAATTGGAAGCTAAGA+AGG | + | chr1.4:65825778-65825797 | None:intergenic | 35.0% | |
GGCGAATTAAAGAAGAAGAA+AGG | + | chr1.4:65825719-65825738 | None:intergenic | 35.0% | |
TAAGAAGGATAAGGTGGAAT+AGG | + | chr1.4:65825763-65825782 | None:intergenic | 35.0% | |
! | AAGTGAGGTAGTATTGGAAT+TGG | + | chr1.4:65825790-65825809 | None:intergenic | 35.0% |
! | GGTTCCATTTTCTCATTCTT+AGG | - | chr1.4:65825989-65826008 | MS.gene69937:intron | 35.0% |
! | GTTTGAGACCGAGTTAAAAA+AGG | - | chr1.4:65826305-65826324 | MS.gene69937:CDS | 35.0% |
AACTGTCAAAAGCTTCCAAC+AGG | - | chr1.4:65825968-65825987 | MS.gene69937:intron | 40.0% | |
ATGAAGAGATTGGAAGCCTA+GGG | + | chr1.4:65825740-65825759 | None:intergenic | 40.0% | |
CAAGAGAAGTGAGGTAGTAT+TGG | + | chr1.4:65825796-65825815 | None:intergenic | 40.0% | |
CTTCTTCTTTAATTCGCCCT+AGG | - | chr1.4:65825721-65825740 | MS.gene69937:CDS | 40.0% | |
GTGGAATAGGATGAAGAGAT+TGG | + | chr1.4:65825750-65825769 | None:intergenic | 40.0% | |
TCCTGCAATAACAACAAGCT+CGG | + | chr1.4:65825889-65825908 | None:intergenic | 40.0% | |
TTTACTTGCAACGCCTTCTT+CGG | - | chr1.4:65825852-65825871 | MS.gene69937:intron | 40.0% | |
AAACTCCTTTGCTGCCTACA+AGG | + | chr1.4:65826289-65826308 | None:intergenic | 45.0% | |
ACGCTTTGTGCTTCTGTTTC+TGG | + | chr1.4:65825832-65825851 | None:intergenic | 45.0% | |
CCAACTTCGGGCAATTTCTT+AGG | + | chr1.4:65825933-65825952 | None:intergenic | 45.0% | |
CCTAAGAAATTGCCCGAAGT+TGG | - | chr1.4:65825930-65825949 | MS.gene69937:intron | 45.0% | |
CCTGCAATAACAACAAGCTC+GGG | + | chr1.4:65825888-65825907 | None:intergenic | 45.0% | |
GATGAAGAGATTGGAAGCCT+AGG | + | chr1.4:65825741-65825760 | None:intergenic | 45.0% | |
GGAAGCTAAGAAGGATAAGG+TGG | + | chr1.4:65825769-65825788 | None:intergenic | 45.0% | |
GGCTTTCTTCAAGAGAAGTG+AGG | + | chr1.4:65825805-65825824 | None:intergenic | 45.0% | |
TGAAACCTTGTAGGCAGCAA+AGG | - | chr1.4:65826281-65826300 | MS.gene69937:CDS | 45.0% | |
!! | TGTGCTTCTGTTTCTGGTTC+TGG | + | chr1.4:65825826-65825845 | None:intergenic | 45.0% |
TGCAACGCCTTCTTCGGATT+AGG | - | chr1.4:65825858-65825877 | MS.gene69937:intron | 50.0% | |
!! | CCCGAGCTTGTTGTTATTGC+AGG | - | chr1.4:65825885-65825904 | MS.gene69937:intron | 50.0% |
!!! | GGAGTCGCTGCTCTTGTTTT+CGG | - | chr1.4:65825906-65825925 | MS.gene69937:intron | 50.0% |
CCGATGCTGCGACCAACTTC+GGG | + | chr1.4:65825945-65825964 | None:intergenic | 60.0% | |
GCCGATGCTGCGACCAACTT+CGG | + | chr1.4:65825946-65825965 | None:intergenic | 60.0% | |
GGGCACGCCTAATCCGAAGA+AGG | + | chr1.4:65825868-65825887 | None:intergenic | 60.0% | |
! | CCCGAAGTTGGTCGCAGCAT+CGG | - | chr1.4:65825942-65825961 | MS.gene69937:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 65825699 | 65826413 | 65825699 | ID=MS.gene69937 |
chr1.4 | mRNA | 65825699 | 65826413 | 65825699 | ID=MS.gene69937.t1;Parent=MS.gene69937 |
chr1.4 | exon | 65826123 | 65826413 | 65826123 | ID=MS.gene69937.t1.exon1;Parent=MS.gene69937.t1 |
chr1.4 | CDS | 65826123 | 65826413 | 65826123 | ID=cds.MS.gene69937.t1;Parent=MS.gene69937.t1 |
chr1.4 | exon | 65825699 | 65825818 | 65825699 | ID=MS.gene69937.t1.exon2;Parent=MS.gene69937.t1 |
chr1.4 | CDS | 65825699 | 65825818 | 65825699 | ID=cds.MS.gene69937.t1;Parent=MS.gene69937.t1 |
Gene Sequence |
Protein sequence |