Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72992.t1 | XP_013457681.1 | 91.9 | 444 | 18 | 3 | 1 | 443 | 1 | 427 | 1.10E-212 | 749.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72992.t1 | A0A072UPT6 | 91.9 | 444 | 18 | 3 | 1 | 443 | 1 | 427 | 7.9e-213 | 749.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene72992 | -0.844158 | 8.99E-59 | -1.69E-46 |
| MS.gene049217 | MS.gene72992 | -0.80705 | 6.11E-50 | -1.69E-46 |
| MS.gene049222 | MS.gene72992 | -0.84832 | 6.61E-60 | -1.69E-46 |
| MS.gene049285 | MS.gene72992 | -0.813768 | 2.17E-51 | -1.69E-46 |
| MS.gene049320 | MS.gene72992 | -0.853911 | 1.75E-61 | -1.69E-46 |
| MS.gene049402 | MS.gene72992 | 0.802909 | 4.49E-49 | -1.69E-46 |
| MS.gene049549 | MS.gene72992 | 0.802571 | 5.27E-49 | -1.69E-46 |
| MS.gene049611 | MS.gene72992 | 0.803661 | 3.13E-49 | -1.69E-46 |
| MS.gene049633 | MS.gene72992 | -0.807394 | 5.16E-50 | -1.69E-46 |
| MS.gene049634 | MS.gene72992 | 0.809466 | 1.87E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene72992 | -0.807374 | 5.22E-50 | -1.69E-46 |
| MS.gene050163 | MS.gene72992 | -0.838899 | 2.19E-57 | -1.69E-46 |
| MS.gene050165 | MS.gene72992 | -0.834411 | 3.05E-56 | -1.69E-46 |
| MS.gene050333 | MS.gene72992 | -0.817425 | 3.32E-52 | -1.69E-46 |
| MS.gene050444 | MS.gene72992 | -0.825978 | 3.49E-54 | -1.69E-46 |
| MS.gene050504 | MS.gene72992 | -0.837696 | 4.46E-57 | -1.69E-46 |
| MS.gene050518 | MS.gene72992 | -0.808121 | 3.62E-50 | -1.69E-46 |
| MS.gene050577 | MS.gene72992 | -0.850486 | 1.65E-60 | -1.69E-46 |
| MS.gene050612 | MS.gene72992 | -0.858461 | 8.11E-63 | -1.69E-46 |
| MS.gene050675 | MS.gene72992 | -0.816465 | 5.45E-52 | -1.69E-46 |
| MS.gene050699 | MS.gene72992 | -0.838547 | 2.70E-57 | -1.69E-46 |
| MS.gene050747 | MS.gene72992 | -0.810316 | 1.22E-50 | -1.69E-46 |
| MS.gene050772 | MS.gene72992 | -0.813294 | 2.75E-51 | -1.69E-46 |
| MS.gene05080 | MS.gene72992 | -0.821064 | 4.92E-53 | -1.69E-46 |
| MS.gene050832 | MS.gene72992 | 0.811152 | 8.08E-51 | -1.69E-46 |
| MS.gene050833 | MS.gene72992 | 0.83301 | 6.82E-56 | -1.69E-46 |
| MS.gene050868 | MS.gene72992 | -0.802745 | 4.85E-49 | -1.69E-46 |
| MS.gene050986 | MS.gene72992 | -0.807774 | 4.29E-50 | -1.69E-46 |
| MS.gene05100 | MS.gene72992 | -0.820084 | 8.27E-53 | -1.69E-46 |
| MS.gene051044 | MS.gene72992 | 0.804852 | 1.77E-49 | -1.69E-46 |
| MS.gene05104 | MS.gene72992 | 0.819437 | 1.16E-52 | -1.69E-46 |
| MS.gene051138 | MS.gene72992 | 0.816458 | 5.47E-52 | -1.69E-46 |
| MS.gene051228 | MS.gene72992 | -0.812981 | 3.22E-51 | -1.69E-46 |
| MS.gene051317 | MS.gene72992 | -0.801517 | 8.67E-49 | -1.69E-46 |
| MS.gene051632 | MS.gene72992 | 0.81166 | 6.26E-51 | -1.69E-46 |
| MS.gene051651 | MS.gene72992 | 0.80266 | 5.05E-49 | -1.69E-46 |
| MS.gene051666 | MS.gene72992 | -0.831267 | 1.84E-55 | -1.69E-46 |
| MS.gene051810 | MS.gene72992 | -0.810564 | 1.08E-50 | -1.69E-46 |
| MS.gene051949 | MS.gene72992 | -0.805173 | 1.52E-49 | -1.69E-46 |
| MS.gene052164 | MS.gene72992 | -0.836048 | 1.18E-56 | -1.69E-46 |
| MS.gene05240 | MS.gene72992 | 0.820793 | 5.68E-53 | -1.69E-46 |
| MS.gene052606 | MS.gene72992 | 0.835181 | 1.95E-56 | -1.69E-46 |
| MS.gene052615 | MS.gene72992 | -0.810061 | 1.39E-50 | -1.69E-46 |
| MS.gene052916 | MS.gene72992 | -0.800172 | 1.63E-48 | -1.69E-46 |
| MS.gene053104 | MS.gene72992 | -0.8025 | 5.45E-49 | -1.69E-46 |
| MS.gene053203 | MS.gene72992 | -0.817428 | 3.31E-52 | -1.69E-46 |
| MS.gene053213 | MS.gene72992 | -0.807149 | 5.82E-50 | -1.69E-46 |
| MS.gene053579 | MS.gene72992 | -0.817636 | 2.98E-52 | -1.69E-46 |
| MS.gene053632 | MS.gene72992 | -0.856703 | 2.69E-62 | -1.69E-46 |
| MS.gene053916 | MS.gene72992 | -0.823471 | 1.36E-53 | -1.69E-46 |
| MS.gene054290 | MS.gene72992 | 0.821327 | 4.28E-53 | -1.69E-46 |
| MS.gene054421 | MS.gene72992 | 0.800437 | 1.44E-48 | -1.69E-46 |
| MS.gene054595 | MS.gene72992 | -0.803645 | 3.16E-49 | -1.69E-46 |
| MS.gene054642 | MS.gene72992 | -0.843392 | 1.44E-58 | -1.69E-46 |
| MS.gene054706 | MS.gene72992 | 0.809967 | 1.46E-50 | -1.69E-46 |
| MS.gene05470 | MS.gene72992 | -0.829142 | 6.07E-55 | -1.69E-46 |
| MS.gene054742 | MS.gene72992 | 0.809523 | 1.81E-50 | -1.69E-46 |
| MS.gene054954 | MS.gene72992 | -0.807472 | 4.97E-50 | -1.69E-46 |
| MS.gene055124 | MS.gene72992 | 0.808128 | 3.61E-50 | -1.69E-46 |
| MS.gene055154 | MS.gene72992 | 0.84609 | 2.70E-59 | -1.69E-46 |
| MS.gene055206 | MS.gene72992 | -0.819714 | 1.00E-52 | -1.69E-46 |
| MS.gene055362 | MS.gene72992 | -0.843246 | 1.58E-58 | -1.69E-46 |
| MS.gene055502 | MS.gene72992 | -0.847532 | 1.09E-59 | -1.69E-46 |
| MS.gene055577 | MS.gene72992 | -0.830585 | 2.70E-55 | -1.69E-46 |
| MS.gene055731 | MS.gene72992 | 0.800653 | 1.30E-48 | -1.69E-46 |
| MS.gene055748 | MS.gene72992 | -0.850082 | 2.14E-60 | -1.69E-46 |
| MS.gene055750 | MS.gene72992 | -0.83317 | 6.22E-56 | -1.69E-46 |
| MS.gene055751 | MS.gene72992 | -0.841158 | 5.63E-58 | -1.69E-46 |
| MS.gene055956 | MS.gene72992 | 0.818837 | 1.59E-52 | -1.69E-46 |
| MS.gene056224 | MS.gene72992 | 0.836138 | 1.12E-56 | -1.69E-46 |
| MS.gene056374 | MS.gene72992 | -0.807624 | 4.61E-50 | -1.69E-46 |
| MS.gene056504 | MS.gene72992 | -0.811417 | 7.08E-51 | -1.69E-46 |
| MS.gene056590 | MS.gene72992 | 0.803851 | 2.86E-49 | -1.69E-46 |
| MS.gene056591 | MS.gene72992 | 0.804644 | 1.96E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene72992 | -0.836576 | 8.63E-57 | -1.69E-46 |
| MS.gene056692 | MS.gene72992 | -0.809122 | 2.21E-50 | -1.69E-46 |
| MS.gene056748 | MS.gene72992 | 0.807116 | 5.91E-50 | -1.69E-46 |
| MS.gene056856 | MS.gene72992 | 0.83838 | 2.98E-57 | -1.69E-46 |
| MS.gene057129 | MS.gene72992 | -0.808248 | 3.40E-50 | -1.69E-46 |
| MS.gene057246 | MS.gene72992 | -0.864551 | 1.12E-64 | -1.69E-46 |
| MS.gene057416 | MS.gene72992 | -0.803568 | 3.28E-49 | -1.69E-46 |
| MS.gene058099 | MS.gene72992 | 0.816002 | 6.92E-52 | -1.69E-46 |
| MS.gene058109 | MS.gene72992 | 0.80691 | 6.54E-50 | -1.69E-46 |
| MS.gene058117 | MS.gene72992 | 0.810154 | 1.33E-50 | -1.69E-46 |
| MS.gene058334 | MS.gene72992 | 0.828022 | 1.13E-54 | -1.69E-46 |
| MS.gene058419 | MS.gene72992 | -0.850844 | 1.31E-60 | -1.69E-46 |
| MS.gene058544 | MS.gene72992 | -0.842404 | 2.64E-58 | -1.69E-46 |
| MS.gene058603 | MS.gene72992 | 0.822348 | 2.49E-53 | -1.69E-46 |
| MS.gene058723 | MS.gene72992 | -0.841132 | 5.72E-58 | -1.69E-46 |
| MS.gene058838 | MS.gene72992 | -0.832395 | 9.69E-56 | -1.69E-46 |
| MS.gene059022 | MS.gene72992 | -0.826521 | 2.59E-54 | -1.69E-46 |
| MS.gene059677 | MS.gene72992 | -0.841927 | 3.53E-58 | -1.69E-46 |
| MS.gene059691 | MS.gene72992 | 0.819536 | 1.10E-52 | -1.69E-46 |
| MS.gene059694 | MS.gene72992 | 0.808844 | 2.54E-50 | -1.69E-46 |
| MS.gene059697 | MS.gene72992 | 0.813142 | 2.97E-51 | -1.69E-46 |
| MS.gene059718 | MS.gene72992 | -0.83825 | 3.22E-57 | -1.69E-46 |
| MS.gene059865 | MS.gene72992 | -0.83198 | 1.23E-55 | -1.69E-46 |
| MS.gene059953 | MS.gene72992 | 0.819265 | 1.27E-52 | -1.69E-46 |
| MS.gene059955 | MS.gene72992 | 0.819563 | 1.09E-52 | -1.69E-46 |
| MS.gene060405 | MS.gene72992 | 0.823402 | 1.41E-53 | -1.69E-46 |
| MS.gene060762 | MS.gene72992 | -0.837305 | 5.62E-57 | -1.69E-46 |
| MS.gene06077 | MS.gene72992 | -0.802178 | 6.34E-49 | -1.69E-46 |
| MS.gene060982 | MS.gene72992 | -0.809592 | 1.75E-50 | -1.69E-46 |
| MS.gene061041 | MS.gene72992 | -0.807882 | 4.07E-50 | -1.69E-46 |
| MS.gene061150 | MS.gene72992 | -0.820728 | 5.88E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72992.t1 | MTR_4g102840 | 93.468 | 444 | 11 | 3 | 1 | 443 | 1 | 427 | 0.0 | 849 |
| MS.gene72992.t1 | MTR_0019s0070 | 40.113 | 354 | 179 | 10 | 106 | 442 | 119 | 456 | 1.60e-59 | 201 |
| MS.gene72992.t1 | MTR_1g101330 | 42.222 | 315 | 148 | 10 | 97 | 398 | 108 | 401 | 3.72e-52 | 181 |
| MS.gene72992.t1 | MTR_8g014580 | 37.307 | 453 | 173 | 18 | 1 | 408 | 1 | 387 | 3.92e-37 | 140 |
| MS.gene72992.t1 | MTR_1g103070 | 32.955 | 440 | 197 | 14 | 27 | 434 | 46 | 419 | 2.25e-35 | 136 |
| MS.gene72992.t1 | MTR_8g102400 | 31.659 | 458 | 217 | 17 | 1 | 417 | 1 | 403 | 1.06e-31 | 125 |
| MS.gene72992.t1 | MTR_8g024540 | 30.445 | 427 | 216 | 13 | 34 | 388 | 50 | 467 | 4.00e-26 | 111 |
| MS.gene72992.t1 | MTR_1g041430 | 41.176 | 170 | 79 | 5 | 1 | 156 | 1 | 163 | 3.28e-21 | 95.9 |
| MS.gene72992.t1 | MTR_2g100740 | 37.912 | 182 | 62 | 5 | 1 | 160 | 1 | 153 | 4.05e-20 | 91.7 |
| MS.gene72992.t1 | MTR_7g114870 | 28.049 | 410 | 190 | 13 | 1 | 389 | 1 | 326 | 8.65e-19 | 88.2 |
| MS.gene72992.t1 | MTR_0047s0040 | 28.182 | 330 | 181 | 11 | 75 | 387 | 66 | 356 | 8.50e-17 | 82.4 |
| MS.gene72992.t1 | MTR_4g050480 | 35.152 | 165 | 79 | 3 | 1 | 155 | 1 | 147 | 1.00e-15 | 79.3 |
| MS.gene72992.t1 | MTR_4g050480 | 35.758 | 165 | 79 | 3 | 1 | 155 | 1 | 148 | 1.79e-15 | 78.6 |
| MS.gene72992.t1 | MTR_1g051810 | 26.246 | 301 | 154 | 11 | 106 | 390 | 107 | 355 | 5.15e-15 | 76.6 |
| MS.gene72992.t1 | MTR_2g102380 | 88.571 | 35 | 4 | 0 | 406 | 440 | 1 | 35 | 3.60e-13 | 65.1 |
| MS.gene72992.t1 | MTR_3g104570 | 35.484 | 155 | 87 | 5 | 1 | 155 | 1 | 142 | 5.95e-13 | 70.9 |
| MS.gene72992.t1 | MTR_8g074730 | 50.746 | 67 | 33 | 0 | 102 | 168 | 69 | 135 | 5.32e-12 | 63.5 |
| MS.gene72992.t1 | MTR_4g108140 | 49.180 | 61 | 31 | 0 | 100 | 160 | 96 | 156 | 3.45e-11 | 65.5 |
| MS.gene72992.t1 | MTR_4g108140 | 49.180 | 61 | 31 | 0 | 100 | 160 | 95 | 155 | 3.48e-11 | 65.5 |
| MS.gene72992.t1 | MTR_1g095740 | 45.455 | 77 | 41 | 1 | 98 | 174 | 135 | 210 | 5.40e-11 | 64.7 |
| MS.gene72992.t1 | MTR_7g114700 | 39.535 | 129 | 56 | 4 | 63 | 170 | 73 | 200 | 6.43e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72992.t1 | AT4G23060 | 44.350 | 354 | 147 | 15 | 104 | 443 | 167 | 484 | 6.48e-66 | 219 |
| MS.gene72992.t1 | AT3G16490 | 31.311 | 412 | 190 | 13 | 1 | 394 | 1 | 337 | 2.91e-33 | 129 |
| MS.gene72992.t1 | AT5G07240 | 34.472 | 322 | 138 | 10 | 92 | 403 | 89 | 347 | 1.21e-28 | 117 |
| MS.gene72992.t1 | AT5G07240 | 34.472 | 322 | 138 | 10 | 92 | 403 | 135 | 393 | 1.71e-28 | 117 |
| MS.gene72992.t1 | AT5G62070 | 37.013 | 308 | 122 | 12 | 103 | 404 | 116 | 357 | 1.41e-26 | 111 |
| MS.gene72992.t1 | AT4G14750 | 40.936 | 171 | 82 | 5 | 1 | 161 | 1 | 162 | 2.00e-23 | 101 |
| MS.gene72992.t1 | AT4G14750 | 40.936 | 171 | 82 | 5 | 1 | 161 | 60 | 221 | 3.15e-23 | 102 |
| MS.gene72992.t1 | AT4G14750 | 40.936 | 171 | 82 | 5 | 1 | 161 | 60 | 221 | 3.19e-23 | 102 |
| MS.gene72992.t1 | AT1G51960 | 38.547 | 179 | 82 | 4 | 1 | 167 | 1 | 163 | 3.59e-21 | 94.7 |
| MS.gene72992.t1 | AT3G49380 | 39.157 | 166 | 72 | 3 | 25 | 183 | 46 | 189 | 4.76e-19 | 88.6 |
| MS.gene72992.t1 | AT1G01110 | 63.077 | 65 | 24 | 0 | 98 | 162 | 115 | 179 | 1.23e-15 | 79.3 |
| MS.gene72992.t1 | AT4G10640 | 37.241 | 145 | 76 | 4 | 15 | 159 | 26 | 155 | 1.51e-15 | 78.6 |
| MS.gene72992.t1 | AT4G00820 | 65.574 | 61 | 21 | 0 | 102 | 162 | 130 | 190 | 2.06e-15 | 79.0 |
| MS.gene72992.t1 | AT4G29150 | 33.333 | 189 | 97 | 5 | 1 | 169 | 17 | 196 | 7.79e-15 | 76.3 |
| MS.gene72992.t1 | AT2G26180 | 34.810 | 158 | 77 | 3 | 1 | 155 | 1 | 135 | 1.17e-14 | 75.9 |
| MS.gene72992.t1 | AT1G17480 | 43.820 | 89 | 43 | 1 | 98 | 186 | 88 | 169 | 6.42e-14 | 73.6 |
| MS.gene72992.t1 | AT3G49260 | 56.716 | 67 | 28 | 1 | 106 | 172 | 122 | 187 | 3.93e-13 | 71.6 |
| MS.gene72992.t1 | AT3G49260 | 56.716 | 67 | 28 | 1 | 106 | 172 | 122 | 187 | 3.93e-13 | 71.6 |
| MS.gene72992.t1 | AT3G49260 | 56.716 | 67 | 28 | 1 | 106 | 172 | 122 | 187 | 3.93e-13 | 71.6 |
| MS.gene72992.t1 | AT3G49260 | 56.716 | 67 | 28 | 1 | 106 | 172 | 122 | 187 | 3.94e-13 | 71.6 |
| MS.gene72992.t1 | AT5G13460 | 30.114 | 176 | 100 | 4 | 9 | 167 | 5 | 174 | 5.37e-13 | 70.9 |
| MS.gene72992.t1 | AT1G72670 | 53.125 | 64 | 30 | 0 | 101 | 164 | 90 | 153 | 1.08e-12 | 70.1 |
| MS.gene72992.t1 | AT3G22190 | 66.667 | 54 | 18 | 0 | 102 | 155 | 86 | 139 | 2.53e-12 | 68.9 |
| MS.gene72992.t1 | AT3G22190 | 66.667 | 54 | 18 | 0 | 102 | 155 | 86 | 139 | 2.53e-12 | 68.9 |
| MS.gene72992.t1 | AT3G22190 | 66.667 | 54 | 18 | 0 | 102 | 155 | 86 | 139 | 2.53e-12 | 68.9 |
| MS.gene72992.t1 | AT3G22190 | 66.667 | 54 | 18 | 0 | 102 | 155 | 86 | 139 | 2.53e-12 | 68.9 |
| MS.gene72992.t1 | AT5G03040 | 35.714 | 112 | 72 | 0 | 69 | 180 | 80 | 191 | 3.58e-12 | 68.6 |
| MS.gene72992.t1 | AT5G03040 | 35.714 | 112 | 72 | 0 | 69 | 180 | 80 | 191 | 3.58e-12 | 68.6 |
| MS.gene72992.t1 | AT5G03040 | 35.714 | 112 | 72 | 0 | 69 | 180 | 80 | 191 | 3.58e-12 | 68.6 |
| MS.gene72992.t1 | AT1G74690 | 38.542 | 96 | 56 | 2 | 81 | 176 | 92 | 184 | 1.18e-11 | 67.0 |
| MS.gene72992.t1 | AT3G52290 | 54.386 | 57 | 26 | 0 | 103 | 159 | 107 | 163 | 1.48e-11 | 66.6 |
| MS.gene72992.t1 | AT1G18840 | 31.138 | 167 | 106 | 2 | 1 | 160 | 1 | 165 | 2.31e-11 | 66.2 |
| MS.gene72992.t1 | AT1G18840 | 31.138 | 167 | 106 | 2 | 1 | 160 | 1 | 165 | 2.31e-11 | 66.2 |
| MS.gene72992.t1 | AT1G18840 | 31.138 | 167 | 106 | 2 | 1 | 160 | 1 | 165 | 2.31e-11 | 66.2 |
| MS.gene72992.t1 | AT1G14380 | 29.744 | 195 | 105 | 10 | 1 | 180 | 1 | 178 | 3.01e-11 | 65.9 |
| MS.gene72992.t1 | AT1G14380 | 29.744 | 195 | 105 | 10 | 1 | 180 | 1 | 178 | 3.01e-11 | 65.9 |
| MS.gene72992.t1 | AT1G14380 | 29.744 | 195 | 105 | 10 | 1 | 180 | 1 | 178 | 3.01e-11 | 65.9 |
| MS.gene72992.t1 | AT1G14380 | 29.744 | 195 | 105 | 10 | 1 | 180 | 1 | 178 | 3.03e-11 | 65.9 |
| MS.gene72992.t1 | AT1G14380 | 29.744 | 195 | 105 | 10 | 1 | 180 | 1 | 178 | 3.03e-11 | 65.9 |
| MS.gene72992.t1 | AT1G14380 | 29.744 | 195 | 105 | 10 | 1 | 180 | 1 | 178 | 3.03e-11 | 65.9 |
| MS.gene72992.t1 | AT1G14380 | 29.744 | 195 | 105 | 10 | 1 | 180 | 1 | 178 | 3.39e-11 | 65.9 |
| MS.gene72992.t1 | AT2G43680 | 47.541 | 61 | 32 | 0 | 106 | 166 | 324 | 384 | 6.89e-11 | 64.7 |
| MS.gene72992.t1 | AT2G43680 | 47.541 | 61 | 32 | 0 | 106 | 166 | 324 | 384 | 6.89e-11 | 64.7 |
| MS.gene72992.t1 | AT2G43680 | 47.541 | 61 | 32 | 0 | 106 | 166 | 324 | 384 | 6.89e-11 | 64.7 |
| MS.gene72992.t1 | AT2G43680 | 47.541 | 61 | 32 | 0 | 106 | 166 | 324 | 384 | 6.89e-11 | 64.7 |
| MS.gene72992.t1 | AT2G43680 | 47.541 | 61 | 32 | 0 | 106 | 166 | 325 | 385 | 6.90e-11 | 64.7 |
Find 88 sgRNAs with CRISPR-Local
Find 225 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGCACTGCGAGCATTAAA+AGG | 0.242876 | 8.3:-18983247 | MS.gene72992:CDS |
| CTCCATCTACGTTTCTCTTT+AGG | 0.251832 | 8.3:+18985108 | None:intergenic |
| TCATATTGAGGCCTTTGTTT+TGG | 0.270764 | 8.3:+18982062 | None:intergenic |
| TCGCTTCTTGTAGGAGTAAA+AGG | 0.280382 | 8.3:+18982179 | None:intergenic |
| CTTGGGCCATCGCTTCTTGT+AGG | 0.300119 | 8.3:+18982170 | None:intergenic |
| GCCATTGGAGAGACAAGATT+TGG | 0.302734 | 8.3:+18982574 | None:intergenic |
| AGGATTGTTGAAATTGATTC+GGG | 0.318333 | 8.3:-18982458 | MS.gene72992:CDS |
| AGAAATCGAGTTCGTCAAAT+AGG | 0.340961 | 8.3:-18982040 | MS.gene72992:CDS |
| GAATCAAAATCTCATCAATT+TGG | 0.345515 | 8.3:-18982344 | MS.gene72992:CDS |
| AGATGGTTTCGTGGCCTTCT+TGG | 0.360236 | 8.3:-18985174 | MS.gene72992:CDS |
| TAGCCTCTAACGTAGCTTCT+TGG | 0.363546 | 8.3:+18982152 | None:intergenic |
| CTATCCTGGTTCCGGTCGTT+TGG | 0.371033 | 8.3:-18981937 | MS.gene72992:CDS |
| TATATTTCATTGCAGAGAAA+TGG | 0.379392 | 8.3:-18982599 | MS.gene72992:intron |
| TAGGATTGTTGAAATTGATT+CGG | 0.384536 | 8.3:-18982459 | MS.gene72992:CDS |
| TTCTGACTGTAATAATAATC+AGG | 0.390223 | 8.3:+18982383 | None:intergenic |
| TTCATGCTCCTAGATCTAAC+AGG | 0.395194 | 8.3:+18982740 | None:intergenic |
| AGCTGCCACGGCAGCGGCTG+CGG | 0.395461 | 8.3:-18984986 | MS.gene72992:CDS |
| TGGACACGACATGGCAAGAT+TGG | 0.396032 | 8.3:-18982006 | MS.gene72992:CDS |
| CGATGGCCTGTCTGTTGTTA+TGG | 0.400810 | 8.3:+18985016 | None:intergenic |
| CTGAAAGCCCTGTTAGATCT+AGG | 0.408830 | 8.3:-18982748 | MS.gene72992:CDS |
| AGCAAAGGCTATCCTGGTTC+CGG | 0.408863 | 8.3:-18981945 | MS.gene72992:CDS |
| TTCTGATATGTTGCCGCCAT+TGG | 0.414525 | 8.3:+18982559 | None:intergenic |
| AGCCTCTAACGTAGCTTCTT+GGG | 0.430229 | 8.3:+18982153 | None:intergenic |
| CTGTATAAGCCATGTAGCTT+GGG | 0.434818 | 8.3:+18982120 | None:intergenic |
| CATCGCTGTGGCAGCTGCCA+CGG | 0.435054 | 8.3:-18984998 | MS.gene72992:CDS |
| CACCTAAAGAGAAACGTAGA+TGG | 0.439241 | 8.3:-18985110 | MS.gene72992:CDS |
| TTCACTAGCAAAGGCTATCC+TGG | 0.450957 | 8.3:-18981951 | MS.gene72992:CDS |
| GGCCCAAGAAGCTACGTTAG+AGG | 0.459692 | 8.3:-18982155 | MS.gene72992:CDS |
| TGCCACGGCAGCGGCTGCGG+AGG | 0.471769 | 8.3:-18984983 | MS.gene72992:CDS |
| ATCAGTTAGACGAACAATCA+TGG | 0.472299 | 8.3:-18982535 | MS.gene72992:CDS |
| TCCGGTCGTTTGGATAAGCT+TGG | 0.473131 | 8.3:-18981927 | MS.gene72992:CDS |
| TCTGTATAAGCCATGTAGCT+TGG | 0.474265 | 8.3:+18982119 | None:intergenic |
| CGTCAGGATACGCGAACAAT+GGG | 0.483008 | 8.3:-18984896 | MS.gene72992:CDS |
| TGTGGCAGCTGCCACGGCAG+CGG | 0.485488 | 8.3:-18984992 | MS.gene72992:CDS |
| CATCTACGTTTCTCTTTAGG+TGG | 0.491070 | 8.3:+18985111 | None:intergenic |
| CGTGGCAGCTGCCACAGCGA+TGG | 0.491710 | 8.3:+18984999 | None:intergenic |
| AACCTCCGCAGCCGCTGCCG+TGG | 0.492017 | 8.3:+18984981 | None:intergenic |
| TGTGACCTCTCACCAGTGCT+TGG | 0.493392 | 8.3:+18983212 | None:intergenic |
| AGATTTAATTACAGCAGTAA+TGG | 0.493826 | 8.3:-18984922 | MS.gene72992:CDS |
| TTGAAATTGTTAGGCAAGGA+AGG | 0.494374 | 8.3:-18983266 | MS.gene72992:intron |
| CATCAATATCTATACCCTAC+AGG | 0.494588 | 8.3:+18981900 | None:intergenic |
| TTGTTATGGACATGTTCTGT+TGG | 0.504792 | 8.3:+18985030 | None:intergenic |
| AACTTCCACGAAAAGCGGCT+TGG | 0.506836 | 8.3:+18984860 | None:intergenic |
| GATCACTTGTGGAGTAAAAG+AGG | 0.507191 | 8.3:+18982405 | None:intergenic |
| AACCAAACTTCCACGAAAAG+CGG | 0.516897 | 8.3:+18984855 | None:intergenic |
| TCAAATAGGTACTCACTCAA+TGG | 0.517109 | 8.3:-18982026 | MS.gene72992:CDS |
| CTCTGATTACCCAAGCTACA+TGG | 0.521640 | 8.3:-18982129 | MS.gene72992:CDS |
| GAACTCGATTTCTCATATTG+AGG | 0.523559 | 8.3:+18982050 | None:intergenic |
| ACAGCAGTAATGGCATCGTC+AGG | 0.529912 | 8.3:-18984912 | MS.gene72992:CDS |
| TCAGAATTTGACCCCTTCAA+AGG | 0.531017 | 8.3:-18982366 | MS.gene72992:CDS |
| TCCAAATCTTGTCTCTCCAA+TGG | 0.536667 | 8.3:-18982575 | MS.gene72992:CDS |
| TGCACTCATAGATCTAACTT+TGG | 0.539356 | 8.3:+18982085 | None:intergenic |
| ATGAAATCTGAGCATTCACC+TGG | 0.541331 | 8.3:-18982722 | MS.gene72992:CDS |
| GATAAGCTTGGAATGCCTGT+AGG | 0.551546 | 8.3:-18981915 | MS.gene72992:CDS |
| CAAGAAAATACCTTGAGTCC+AGG | 0.551923 | 8.3:+18982704 | None:intergenic |
| TCTGCAACTTCAAAAGATGA+TGG | 0.554569 | 8.3:-18982215 | MS.gene72992:CDS |
| ACTGCGAGCATTAAAAGGGC+TGG | 0.555861 | 8.3:-18983242 | MS.gene72992:CDS |
| CAAGCAAGCTTCACTAGCAA+AGG | 0.562259 | 8.3:-18981960 | MS.gene72992:CDS |
| TCCAAGCTTATCCAAACGAC+CGG | 0.564514 | 8.3:+18981926 | None:intergenic |
| AGGCACTGCGAGCATTAAAA+GGG | 0.564754 | 8.3:-18983246 | MS.gene72992:CDS |
| ATAAGCTTGGAATGCCTGTA+GGG | 0.568830 | 8.3:-18981914 | MS.gene72992:CDS |
| TGGTGAGAGGTCACATTGAG+AGG | 0.570721 | 8.3:-18983204 | MS.gene72992:CDS |
| CACTAATAAGAACATATAGC+AGG | 0.570955 | 8.3:-18982499 | MS.gene72992:CDS |
| TGAGCATTCACCTGGACTCA+AGG | 0.572382 | 8.3:-18982714 | MS.gene72992:intron |
| GCTGGTGAAACTCCAAGCAC+TGG | 0.572685 | 8.3:-18983224 | MS.gene72992:CDS |
| TCGTCAGGATACGCGAACAA+TGG | 0.574295 | 8.3:-18984897 | MS.gene72992:CDS |
| CCCACTAAAACTTAACGAAG+TGG | 0.574632 | 8.3:-18982285 | MS.gene72992:CDS |
| CTCACTCAATGGACACGACA+TGG | 0.576134 | 8.3:-18982015 | MS.gene72992:CDS |
| TTATCCAAACGACCGGAACC+AGG | 0.578361 | 8.3:+18981933 | None:intergenic |
| GTTGCAGATGATAAAAGTTG+AGG | 0.588792 | 8.3:+18982230 | None:intergenic |
| TGGTCAAAGTGTATCTTGTG+AGG | 0.590678 | 8.3:-18982324 | MS.gene72992:CDS |
| AAAGCATCAAGATGGTTTCG+TGG | 0.592249 | 8.3:-18985183 | MS.gene72992:CDS |
| ATAATAATCAGGATCACTTG+TGG | 0.594762 | 8.3:+18982394 | None:intergenic |
| CAATGGGAAAAGCATCAAGA+TGG | 0.597654 | 8.3:-18985191 | MS.gene72992:CDS |
| ATTCAAATGTGACGTTTGCA+TGG | 0.610840 | 8.3:+18983108 | None:intergenic |
| ACATGTCCATAACAACAGAC+AGG | 0.613391 | 8.3:-18985022 | MS.gene72992:CDS |
| TTTACTCCTACAAGAAGCGA+TGG | 0.621425 | 8.3:-18982176 | MS.gene72992:CDS |
| AAACTCCAAGCACTGGTGAG+AGG | 0.631533 | 8.3:-18983217 | MS.gene72992:CDS |
| CTATGAGTGCACCAAAACAA+AGG | 0.632089 | 8.3:-18982073 | MS.gene72992:CDS |
| GGCTTATACAGAGTCAGCAA+AGG | 0.639300 | 8.3:-18982108 | MS.gene72992:CDS |
| GTAATTAAATCTGACAACCT+CGG | 0.643378 | 8.3:+18984933 | None:intergenic |
| TAATTACACATACATAGAGG+TGG | 0.652638 | 8.3:+18983068 | None:intergenic |
| AAATCTTGTCTCTCCAATGG+CGG | 0.653496 | 8.3:-18982572 | MS.gene72992:CDS |
| TCATGCTCCTAGATCTAACA+GGG | 0.657366 | 8.3:+18982741 | None:intergenic |
| AAATGCTGAAAATGCTGCCG+AGG | 0.668282 | 8.3:-18984950 | MS.gene72992:CDS |
| CAACAGACAGGCCATCGCTG+TGG | 0.692042 | 8.3:-18985010 | MS.gene72992:CDS |
| AGAGGAAACGAACAGCAGAG+TGG | 0.734572 | 8.3:-18983186 | MS.gene72992:CDS |
| GTTCTGTTGGAAACGTGACG+TGG | 0.750062 | 8.3:+18985043 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATAAAATTAAAATTTAT+TGG | + | chr8.3:18982391-18982410 | None:intergenic | 0.0% |
| !! | ATAAAATTAAAATTTATTGG+TGG | + | chr8.3:18982388-18982407 | None:intergenic | 10.0% |
| !! | TAAAATTAAAATTTATTGGT+GGG | + | chr8.3:18982387-18982406 | None:intergenic | 10.0% |
| !!! | AAAATGTTTTTTCAAAAAAA+AGG | + | chr8.3:18983307-18983326 | None:intergenic | 10.0% |
| !!! | TTAATAGAAGTTATTTCATT+CGG | - | chr8.3:18983467-18983486 | MS.gene72992:intron | 15.0% |
| !!! | TTTAGTTTTATTAATGAATG+TGG | - | chr8.3:18982774-18982793 | MS.gene72992:intron | 15.0% |
| !!! | TTTTGAATATTGAAATTGTT+AGG | - | chr8.3:18983816-18983835 | MS.gene72992:intron | 15.0% |
| !! | AATTATGGGAATGAAATTAA+TGG | + | chr8.3:18982267-18982286 | None:intergenic | 20.0% |
| !! | GAATGAAATAACTTCTATTA+AGG | + | chr8.3:18983468-18983487 | None:intergenic | 20.0% |
| !! | GTCATTATTTAACTACAAAA+AGG | + | chr8.3:18982891-18982910 | None:intergenic | 20.0% |
| !! | TAAAGACTAGTAAAAAAGAT+GGG | - | chr8.3:18983040-18983059 | MS.gene72992:intron | 20.0% |
| !! | TAAATAATGACATTCAACTT+TGG | - | chr8.3:18982900-18982919 | MS.gene72992:intron | 20.0% |
| !! | TCAAATTATTTGTCTACTTA+TGG | - | chr8.3:18984462-18984481 | MS.gene72992:intron | 20.0% |
| !! | TTATTTAACTACAAAAAGGA+CGG | + | chr8.3:18982887-18982906 | None:intergenic | 20.0% |
| !! | TTTATGATGTTTCCTTTATT+TGG | - | chr8.3:18982539-18982558 | MS.gene72992:CDS | 20.0% |
| !! | TTTGGGTAAAAATTAAGAAA+TGG | + | chr8.3:18984421-18984440 | None:intergenic | 20.0% |
| !!! | ATAGTTCTGTAAATTTTACA+TGG | + | chr8.3:18982677-18982696 | None:intergenic | 20.0% |
| !!! | GTTGATTTTTGTATTTGTTT+TGG | - | chr8.3:18984148-18984167 | MS.gene72992:intron | 20.0% |
| ! | AAAACAAAGCTTAGAAATGA+AGG | + | chr8.3:18982290-18982309 | None:intergenic | 25.0% |
| ! | AAAAGAATAAGTCTACATCA+AGG | + | chr8.3:18983165-18983184 | None:intergenic | 25.0% |
| ! | AAAGACTAGTAAAAAAGATG+GGG | - | chr8.3:18983041-18983060 | MS.gene72992:intron | 25.0% |
| ! | AACAAAGTAAATAAAGACTG+CGG | + | chr8.3:18983675-18983694 | None:intergenic | 25.0% |
| ! | AATATTGAAATTGTTAGGCA+AGG | - | chr8.3:18983821-18983840 | MS.gene72992:intron | 25.0% |
| ! | AGATTTAATTACAGCAGTAA+TGG | - | chr8.3:18982169-18982188 | MS.gene72992:CDS | 25.0% |
| ! | CTAAAGACTAGTAAAAAAGA+TGG | - | chr8.3:18983039-18983058 | MS.gene72992:intron | 25.0% |
| ! | CTTAGAAATGAAGGAATTAT+GGG | + | chr8.3:18982281-18982300 | None:intergenic | 25.0% |
| ! | GAAAAATCATACAACAAACA+AGG | + | chr8.3:18983020-18983039 | None:intergenic | 25.0% |
| ! | GAATCAAAATCTCATCAATT+TGG | - | chr8.3:18984747-18984766 | MS.gene72992:intron | 25.0% |
| ! | GGGAATATAAATTTAGTAGT+TGG | - | chr8.3:18982971-18982990 | MS.gene72992:intron | 25.0% |
| ! | GTAACTAACAATCCAAATAA+AGG | + | chr8.3:18982554-18982573 | None:intergenic | 25.0% |
| ! | GTTAAGTTCAAAGTAATTGT+AGG | + | chr8.3:18983760-18983779 | None:intergenic | 25.0% |
| ! | TAGGAAATTAATTGAAGCAA+TGG | + | chr8.3:18983741-18983760 | None:intergenic | 25.0% |
| ! | TAGGATTGTTGAAATTGATT+CGG | - | chr8.3:18984632-18984651 | MS.gene72992:intron | 25.0% |
| ! | TATATTTCATTGCAGAGAAA+TGG | - | chr8.3:18984492-18984511 | MS.gene72992:intron | 25.0% |
| ! | TATTTCCTTGTCACATTTAA+TGG | - | chr8.3:18982592-18982611 | MS.gene72992:intron | 25.0% |
| ! | TCATAATTACACATACATAG+AGG | + | chr8.3:18984029-18984048 | None:intergenic | 25.0% |
| ! | TTCTCTGCAATGAAATATAA+CGG | + | chr8.3:18984491-18984510 | None:intergenic | 25.0% |
| ! | TTCTGACTGTAATAATAATC+AGG | + | chr8.3:18984711-18984730 | None:intergenic | 25.0% |
| ! | TTTACAAATGATCGTATACA+GGG | - | chr8.3:18984300-18984319 | MS.gene72992:intron | 25.0% |
| ! | TTTGCAGATATGGAATAATT+TGG | - | chr8.3:18983530-18983549 | MS.gene72992:intron | 25.0% |
| !! | CATTAGAAGTGTAATAATGA+TGG | + | chr8.3:18983141-18983160 | None:intergenic | 25.0% |
| !! | TGTACCAAAAACATTTTTCA+GGG | + | chr8.3:18982509-18982528 | None:intergenic | 25.0% |
| !! | TTGTACCAAAAACATTTTTC+AGG | + | chr8.3:18982510-18982529 | None:intergenic | 25.0% |
| !! | TTTTACAAATGATCGTATAC+AGG | - | chr8.3:18984299-18984318 | MS.gene72992:intron | 25.0% |
| !! | TTTTACATGGAACGAATTAA+TGG | + | chr8.3:18982664-18982683 | None:intergenic | 25.0% |
| !!! | AAAGAATGCAATCACTTTTA+CGG | - | chr8.3:18983932-18983951 | MS.gene72992:intron | 25.0% |
| !!! | GTATTGTACTTTTGTTTTCT+TGG | - | chr8.3:18983234-18983253 | MS.gene72992:CDS | 25.0% |
| AAGTGTAATAATGATGGTCA+AGG | + | chr8.3:18983135-18983154 | None:intergenic | 30.0% | |
| ACATCAACTATGCAGTTAAA+AGG | + | chr8.3:18984089-18984108 | None:intergenic | 30.0% | |
| ATAAATTTAGTAGTTGGCGT+TGG | - | chr8.3:18982977-18982996 | MS.gene72992:intron | 30.0% | |
| ATAATAATCAGGATCACTTG+TGG | + | chr8.3:18984700-18984719 | None:intergenic | 30.0% | |
| CACTAATAAGAACATATAGC+AGG | - | chr8.3:18984592-18984611 | MS.gene72992:intron | 30.0% | |
| CTTGTATAGGAAACATCTTA+GGG | + | chr8.3:18983634-18983653 | None:intergenic | 30.0% | |
| GCTTAGAAATGAAGGAATTA+TGG | + | chr8.3:18982282-18982301 | None:intergenic | 30.0% | |
| GGTATAACAGAATCTTGTAT+AGG | + | chr8.3:18983647-18983666 | None:intergenic | 30.0% | |
| GTAATTAAATCTGACAACCT+CGG | + | chr8.3:18982161-18982180 | None:intergenic | 30.0% | |
| GTTATTTACAGAATGTAGTG+TGG | - | chr8.3:18983692-18983711 | MS.gene72992:intron | 30.0% | |
| TAAATAAAGACTGCGGATAT+TGG | + | chr8.3:18983668-18983687 | None:intergenic | 30.0% | |
| TAATTACACATACATAGAGG+TGG | + | chr8.3:18984026-18984045 | None:intergenic | 30.0% | |
| TAGATCAAAGAACATGATGT+TGG | + | chr8.3:18984269-18984288 | None:intergenic | 30.0% | |
| TCAGTATCTCAAACATAGTA+AGG | + | chr8.3:18983782-18983801 | None:intergenic | 30.0% | |
| TCTTGTATAGGAAACATCTT+AGG | + | chr8.3:18983635-18983654 | None:intergenic | 30.0% | |
| TGATGAATCACAGAAAAAAG+AGG | + | chr8.3:18984061-18984080 | None:intergenic | 30.0% | |
| TTATATTCCCTGTAGATTCA+GGG | + | chr8.3:18982961-18982980 | None:intergenic | 30.0% | |
| TTTATATTCCCTGTAGATTC+AGG | + | chr8.3:18982962-18982981 | None:intergenic | 30.0% | |
| ! | AGGATTGTTGAAATTGATTC+GGG | - | chr8.3:18984633-18984652 | MS.gene72992:intron | 30.0% |
| ! | ATTTATTGGTGGGTAAACTT+AGG | + | chr8.3:18982377-18982396 | None:intergenic | 30.0% |
| ! | GTTACCCTGAAAAATGTTTT+TGG | - | chr8.3:18982502-18982521 | MS.gene72992:CDS | 30.0% |
| ! | TGTTTTCTTGGCTTATACTT+GGG | - | chr8.3:18983246-18983265 | MS.gene72992:CDS | 30.0% |
| ! | TTGTTTTCTTGGCTTATACT+TGG | - | chr8.3:18983245-18983264 | MS.gene72992:CDS | 30.0% |
| ! | TTTAACTGCATAGTTGATGT+AGG | - | chr8.3:18984089-18984108 | MS.gene72992:intron | 30.0% |
| ! | TTTATTGGTGGGTAAACTTA+GGG | + | chr8.3:18982376-18982395 | None:intergenic | 30.0% |
| !! | AAGAATGCAATCACTTTTAC+GGG | - | chr8.3:18983933-18983952 | MS.gene72992:intron | 30.0% |
| !! | GGTGTTATTGAATGTTTGAT+AGG | - | chr8.3:18982815-18982834 | MS.gene72992:intron | 30.0% |
| !!! | AAAGGACGGAGAATTTTTTA+TGG | + | chr8.3:18982873-18982892 | None:intergenic | 30.0% |
| !!! | AAGGACGGAGAATTTTTTAT+GGG | + | chr8.3:18982872-18982891 | None:intergenic | 30.0% |
| !!! | AGATTTTGATTCCTTTGAAG+GGG | + | chr8.3:18984739-18984758 | None:intergenic | 30.0% |
| !!! | GAGATTTTGATTCCTTTGAA+GGG | + | chr8.3:18984740-18984759 | None:intergenic | 30.0% |
| !!! | GTGTTTTGATTTGCAATTTC+TGG | - | chr8.3:18983100-18983119 | MS.gene72992:CDS | 30.0% |
| !!! | TGAGATTTTGATTCCTTTGA+AGG | + | chr8.3:18984741-18984760 | None:intergenic | 30.0% |
| !!! | TGCTCAAGTTTTGATTTTGT+GGG | - | chr8.3:18983204-18983223 | MS.gene72992:CDS | 30.0% |
| !!! | TTGCTCAAGTTTTGATTTTG+TGG | - | chr8.3:18983203-18983222 | MS.gene72992:CDS | 30.0% |
| !!! | TTTTGATTTGCAATTTCTGG+TGG | - | chr8.3:18983103-18983122 | MS.gene72992:CDS | 30.0% |
| AATGTGGAATTTGTCAACGA+AGG | - | chr8.3:18982790-18982809 | MS.gene72992:intron | 35.0% | |
| AGAAATCGAGTTCGTCAAAT+AGG | - | chr8.3:18985051-18985070 | MS.gene72992:CDS | 35.0% | |
| AGAGATTTCACTCAACTTCT+AGG | + | chr8.3:18982724-18982743 | None:intergenic | 35.0% | |
| ATCAGTTAGACGAACAATCA+TGG | - | chr8.3:18984556-18984575 | MS.gene72992:intron | 35.0% | |
| ATTAATGGCTAGCACAATAG+AGG | + | chr8.3:18982649-18982668 | None:intergenic | 35.0% | |
| ATTCAAATGTGACGTTTGCA+TGG | + | chr8.3:18983986-18984005 | None:intergenic | 35.0% | |
| GAACTCGATTTCTCATATTG+AGG | + | chr8.3:18985044-18985063 | None:intergenic | 35.0% | |
| GGTCTCAAAAAAACTGAACA+CGG | - | chr8.3:18981938-18981957 | MS.gene72992:CDS | 35.0% | |
| GTAGTAGAAGAATAGAACCA+TGG | + | chr8.3:18982844-18982863 | None:intergenic | 35.0% | |
| GTTGCAGATGATAAAAGTTG+AGG | + | chr8.3:18984864-18984883 | None:intergenic | 35.0% | |
| TATATTCCCTGTAGATTCAG+GGG | + | chr8.3:18982960-18982979 | None:intergenic | 35.0% | |
| TCAAATAGGTACTCACTCAA+TGG | - | chr8.3:18985065-18985084 | MS.gene72992:CDS | 35.0% | |
| TCGATCCATTAAATGTGACA+AGG | + | chr8.3:18982600-18982619 | None:intergenic | 35.0% | |
| TCTGCAACTTCAAAAGATGA+TGG | - | chr8.3:18984876-18984895 | MS.gene72992:CDS | 35.0% | |
| TGCACTCATAGATCTAACTT+TGG | + | chr8.3:18985009-18985028 | None:intergenic | 35.0% | |
| TTGAAATTGTTAGGCAAGGA+AGG | - | chr8.3:18983825-18983844 | MS.gene72992:intron | 35.0% | |
| TTGTTATGGACATGTTCTGT+TGG | + | chr8.3:18982064-18982083 | None:intergenic | 35.0% | |
| TTTATGTCGTCGTATTGCTA+TGG | - | chr8.3:18982480-18982499 | MS.gene72992:CDS | 35.0% | |
| TTTGACAACAAAAGAGAGCA+GGG | + | chr8.3:18983420-18983439 | None:intergenic | 35.0% | |
| ! | CACATTTAATGGATCGATGA+TGG | - | chr8.3:18982603-18982622 | MS.gene72992:intron | 35.0% |
| ! | GCACTTTCATTTTGCAGATA+TGG | - | chr8.3:18983520-18983539 | MS.gene72992:intron | 35.0% |
| ! | TAGTTGATGTAGGAGTATGA+AGG | - | chr8.3:18984099-18984118 | MS.gene72992:intron | 35.0% |
| !! | AGCATTTTCAGCATTTGCTA+CGG | + | chr8.3:18982137-18982156 | None:intergenic | 35.0% |
| !! | CCACTTCGTTAAGTTTTAGT+GGG | + | chr8.3:18984809-18984828 | None:intergenic | 35.0% |
| !! | TCATATTGAGGCCTTTGTTT+TGG | + | chr8.3:18985032-18985051 | None:intergenic | 35.0% |
| !! | TCCACTTCGTTAAGTTTTAG+TGG | + | chr8.3:18984810-18984829 | None:intergenic | 35.0% |
| !!! | CAATGCAGATGTTTTTTGTG+CGG | + | chr8.3:18985111-18985130 | None:intergenic | 35.0% |
| !!! | CAGTTTTTTTGAGACCAAGA+AGG | + | chr8.3:18981934-18981953 | None:intergenic | 35.0% |
| !!! | GCTCAAGTTTTGATTTTGTG+GGG | - | chr8.3:18983205-18983224 | MS.gene72992:CDS | 35.0% |
| !!! | TCAGATTTTTCTGGTGTTAC+TGG | + | chr8.3:18984327-18984346 | None:intergenic | 35.0% |
| AAATCTTGTCTCTCCAATGG+CGG | - | chr8.3:18984519-18984538 | MS.gene72992:intron | 40.0% | |
| AACCAAACTTCCACGAAAAG+CGG | + | chr8.3:18982239-18982258 | None:intergenic | 40.0% | |
| ACACTCGATGCACATTGTTT+GGG | + | chr8.3:18984438-18984457 | None:intergenic | 40.0% | |
| ACATGTCCATAACAACAGAC+AGG | - | chr8.3:18982069-18982088 | MS.gene72992:CDS | 40.0% | |
| ATAAGCTTGGAATGCCTGTA+GGG | - | chr8.3:18985177-18985196 | MS.gene72992:CDS | 40.0% | |
| ATGAAATCTGAGCATTCACC+TGG | - | chr8.3:18984369-18984388 | MS.gene72992:intron | 40.0% | |
| CAAGAAAATACCTTGAGTCC+AGG | + | chr8.3:18984390-18984409 | None:intergenic | 40.0% | |
| CACCTAAAGAGAAACGTAGA+TGG | - | chr8.3:18981981-18982000 | MS.gene72992:CDS | 40.0% | |
| CATCTACGTTTCTCTTTAGG+TGG | + | chr8.3:18981983-18982002 | None:intergenic | 40.0% | |
| CCCACTAAAACTTAACGAAG+TGG | - | chr8.3:18984806-18984825 | MS.gene72992:intron | 40.0% | |
| CTATGAGTGCACCAAAACAA+AGG | - | chr8.3:18985018-18985037 | MS.gene72992:CDS | 40.0% | |
| CTCCATCTACGTTTCTCTTT+AGG | + | chr8.3:18981986-18982005 | None:intergenic | 40.0% | |
| CTGTATAAGCCATGTAGCTT+GGG | + | chr8.3:18984974-18984993 | None:intergenic | 40.0% | |
| CTTTGACAACAAAAGAGAGC+AGG | + | chr8.3:18983421-18983440 | None:intergenic | 40.0% | |
| GAACATGATGTTGGCAGTAT+TGG | + | chr8.3:18984260-18984279 | None:intergenic | 40.0% | |
| GATCACTTGTGGAGTAAAAG+AGG | + | chr8.3:18984689-18984708 | None:intergenic | 40.0% | |
| GGAGTGACGAAAAAAGTGAT+AGG | - | chr8.3:18984613-18984632 | MS.gene72992:intron | 40.0% | |
| GTAATAATGATGGTCAAGGC+AGG | + | chr8.3:18983131-18983150 | None:intergenic | 40.0% | |
| GTAGAAGAATAGAACCATGG+TGG | + | chr8.3:18982841-18982860 | None:intergenic | 40.0% | |
| GTTCTATTCTTCTACTACCG+TGG | - | chr8.3:18982846-18982865 | MS.gene72992:intron | 40.0% | |
| TACACTCGATGCACATTGTT+TGG | + | chr8.3:18984439-18984458 | None:intergenic | 40.0% | |
| TCAGAATTTGACCCCTTCAA+AGG | - | chr8.3:18984725-18984744 | MS.gene72992:intron | 40.0% | |
| TCATGCTCCTAGATCTAACA+GGG | + | chr8.3:18984353-18984372 | None:intergenic | 40.0% | |
| TCCAAATCTTGTCTCTCCAA+TGG | - | chr8.3:18984516-18984535 | MS.gene72992:intron | 40.0% | |
| TCGCTTCTTGTAGGAGTAAA+AGG | + | chr8.3:18984915-18984934 | None:intergenic | 40.0% | |
| TCTGTATAAGCCATGTAGCT+TGG | + | chr8.3:18984975-18984994 | None:intergenic | 40.0% | |
| TGGAATTTGTCAACGAAGGT+AGG | - | chr8.3:18982794-18982813 | MS.gene72992:intron | 40.0% | |
| TGGGTAAACTTAGGGATTAG+TGG | + | chr8.3:18982368-18982387 | None:intergenic | 40.0% | |
| TGGTCAAAGTGTATCTTGTG+AGG | - | chr8.3:18984767-18984786 | MS.gene72992:intron | 40.0% | |
| TTCATGCTCCTAGATCTAAC+AGG | + | chr8.3:18984354-18984373 | None:intergenic | 40.0% | |
| TTGACAACAAAAGAGAGCAG+GGG | + | chr8.3:18983419-18983438 | None:intergenic | 40.0% | |
| TTTACTCCTACAAGAAGCGA+TGG | - | chr8.3:18984915-18984934 | MS.gene72992:CDS | 40.0% | |
| ! | AAAGCATCAAGATGGTTTCG+TGG | - | chr8.3:18981908-18981927 | MS.gene72992:CDS | 40.0% |
| ! | ACAGGGCTTTCAGATTTTTC+TGG | + | chr8.3:18984336-18984355 | None:intergenic | 40.0% |
| !! | AACTTTGGCCTTTTGGTTGT+GGG | - | chr8.3:18982915-18982934 | MS.gene72992:intron | 40.0% |
| !! | GACATTCAACTTTGGCCTTT+TGG | - | chr8.3:18982908-18982927 | MS.gene72992:intron | 40.0% |
| !!! | GGAGAATTTTTTATGGGCCA+CGG | + | chr8.3:18982866-18982885 | None:intergenic | 40.0% |
| AAATGCTGAAAATGCTGCCG+AGG | - | chr8.3:18982141-18982160 | MS.gene72992:CDS | 45.0% | |
| AGCCTCTAACGTAGCTTCTT+GGG | + | chr8.3:18984941-18984960 | None:intergenic | 45.0% | |
| CAAGCAAGCTTCACTAGCAA+AGG | - | chr8.3:18985131-18985150 | MS.gene72992:CDS | 45.0% | |
| CTCTGATTACCCAAGCTACA+TGG | - | chr8.3:18984962-18984981 | MS.gene72992:CDS | 45.0% | |
| CTGAAAGCCCTGTTAGATCT+AGG | - | chr8.3:18984343-18984362 | MS.gene72992:intron | 45.0% | |
| GAATGTTTGATAGGCCACCA+TGG | - | chr8.3:18982824-18982843 | MS.gene72992:intron | 45.0% | |
| GATAAGCTTGGAATGCCTGT+AGG | - | chr8.3:18985176-18985195 | MS.gene72992:CDS | 45.0% | |
| GCCATTGGAGAGACAAGATT+TGG | + | chr8.3:18984520-18984539 | None:intergenic | 45.0% | |
| GGCTTATACAGAGTCAGCAA+AGG | - | chr8.3:18984983-18985002 | MS.gene72992:CDS | 45.0% | |
| TAGCACAATAGAGGCTAAGC+TGG | + | chr8.3:18982640-18982659 | None:intergenic | 45.0% | |
| TAGCCTCTAACGTAGCTTCT+TGG | + | chr8.3:18984942-18984961 | None:intergenic | 45.0% | |
| TCCAAGCTTATCCAAACGAC+CGG | + | chr8.3:18985168-18985187 | None:intergenic | 45.0% | |
| TCTTGGCTTATACTTGGGCA+GGG | - | chr8.3:18983251-18983270 | MS.gene72992:CDS | 45.0% | |
| TGACAACAAAAGAGAGCAGG+GGG | + | chr8.3:18983418-18983437 | None:intergenic | 45.0% | |
| TTCACTAGCAAAGGCTATCC+TGG | - | chr8.3:18985140-18985159 | MS.gene72992:CDS | 45.0% | |
| TTCTGATATGTTGCCGCCAT+TGG | + | chr8.3:18984535-18984554 | None:intergenic | 45.0% | |
| TTCTTGGCTTATACTTGGGC+AGG | - | chr8.3:18983250-18983269 | MS.gene72992:CDS | 45.0% | |
| ! | AGGCACTGCGAGCATTAAAA+GGG | - | chr8.3:18983845-18983864 | MS.gene72992:intron | 45.0% |
| !! | AAGGCACTGCGAGCATTAAA+AGG | - | chr8.3:18983844-18983863 | MS.gene72992:intron | 45.0% |
| !! | ACTTTGGCCTTTTGGTTGTG+GGG | - | chr8.3:18982916-18982935 | MS.gene72992:intron | 45.0% |
| !! | CAACTTTGGCCTTTTGGTTG+TGG | - | chr8.3:18982914-18982933 | MS.gene72992:intron | 45.0% |
| !! | TAGTTGGCGTTGGTGAATGA+GGG | - | chr8.3:18982987-18983006 | MS.gene72992:intron | 45.0% |
| !!! | ATTTTATTTAAAATAATGTT+TGG | - | chr8.3:18982401-18982420 | MS.gene72992:CDS | 5.0% |
| AACTTCCACGAAAAGCGGCT+TGG | + | chr8.3:18982234-18982253 | None:intergenic | 50.0% | |
| ACAGCAGTAATGGCATCGTC+AGG | - | chr8.3:18982179-18982198 | MS.gene72992:CDS | 50.0% | |
| ACTGCGAGCATTAAAAGGGC+TGG | - | chr8.3:18983849-18983868 | MS.gene72992:intron | 50.0% | |
| AGAGGAAACGAACAGCAGAG+TGG | - | chr8.3:18983905-18983924 | MS.gene72992:intron | 50.0% | |
| AGATGGTTTCGTGGCCTTCT+TGG | - | chr8.3:18981917-18981936 | MS.gene72992:CDS | 50.0% | |
| AGCAAAGGCTATCCTGGTTC+CGG | - | chr8.3:18985146-18985165 | MS.gene72992:CDS | 50.0% | |
| CCATTGTCCCCACAACCAAA+AGG | + | chr8.3:18982926-18982945 | None:intergenic | 50.0% | |
| CGATGGCCTGTCTGTTGTTA+TGG | + | chr8.3:18982078-18982097 | None:intergenic | 50.0% | |
| CGTCAGGATACGCGAACAAT+GGG | - | chr8.3:18982195-18982214 | MS.gene72992:CDS | 50.0% | |
| CTCACTCAATGGACACGACA+TGG | - | chr8.3:18985076-18985095 | MS.gene72992:CDS | 50.0% | |
| GACAACAAAAGAGAGCAGGG+GGG | + | chr8.3:18983417-18983436 | None:intergenic | 50.0% | |
| GCAGGGAAGTTGTTGAAGGA+AGG | - | chr8.3:18983268-18983287 | MS.gene72992:intron | 50.0% | |
| GTTCTGTTGGAAACGTGACG+TGG | + | chr8.3:18982051-18982070 | None:intergenic | 50.0% | |
| TCCGGTCGTTTGGATAAGCT+TGG | - | chr8.3:18985164-18985183 | MS.gene72992:CDS | 50.0% | |
| TCGTCAGGATACGCGAACAA+TGG | - | chr8.3:18982194-18982213 | MS.gene72992:CDS | 50.0% | |
| TGAGCATTCACCTGGACTCA+AGG | - | chr8.3:18984377-18984396 | MS.gene72992:intron | 50.0% | |
| TGGACACGACATGGCAAGAT+TGG | - | chr8.3:18985085-18985104 | MS.gene72992:CDS | 50.0% | |
| TGGTGAGAGGTCACATTGAG+AGG | - | chr8.3:18983887-18983906 | MS.gene72992:intron | 50.0% | |
| TGTCCCATGAGCTGAGTCTA+GGG | - | chr8.3:18983077-18983096 | MS.gene72992:intron | 50.0% | |
| TTATCCAAACGACCGGAACC+AGG | + | chr8.3:18985161-18985180 | None:intergenic | 50.0% | |
| TTGGGCAGGGAAGTTGTTGA+AGG | - | chr8.3:18983264-18983283 | MS.gene72992:intron | 50.0% | |
| !! | AAACTCCAAGCACTGGTGAG+AGG | - | chr8.3:18983874-18983893 | MS.gene72992:intron | 50.0% |
| !! | CCTTTTGGTTGTGGGGACAA+TGG | - | chr8.3:18982923-18982942 | MS.gene72992:intron | 50.0% |
| !! | GCAATCACTTTTACGGGCAC+AGG | - | chr8.3:18983939-18983958 | MS.gene72992:intron | 50.0% |
| !! | GTAGTTGGCGTTGGTGAATG+AGG | - | chr8.3:18982986-18983005 | MS.gene72992:intron | 50.0% |
| !! | TAGTGTGGCTCTGAGTGCTA+CGG | - | chr8.3:18983707-18983726 | MS.gene72992:intron | 50.0% |
| !!! | AAGATCCAAGCCGCTTTTCG+TGG | - | chr8.3:18982226-18982245 | MS.gene72992:CDS | 50.0% |
| !!! | AGCCGCTTTTCGTGGAAGTT+TGG | - | chr8.3:18982234-18982253 | MS.gene72992:CDS | 50.0% |
| ACACCCCTAGACTCAGCTCA+TGG | + | chr8.3:18983084-18983103 | None:intergenic | 55.0% | |
| CACCAGCCCCTGAATCTACA+GGG | - | chr8.3:18982951-18982970 | MS.gene72992:intron | 55.0% | |
| CACCCCTAGACTCAGCTCAT+GGG | + | chr8.3:18983083-18983102 | None:intergenic | 55.0% | |
| CTATCCTGGTTCCGGTCGTT+TGG | - | chr8.3:18985154-18985173 | MS.gene72992:CDS | 55.0% | |
| CTTGGGCCATCGCTTCTTGT+AGG | + | chr8.3:18984924-18984943 | None:intergenic | 55.0% | |
| GCTGGTGAAACTCCAAGCAC+TGG | - | chr8.3:18983867-18983886 | MS.gene72992:intron | 55.0% | |
| GGCCCAAGAAGCTACGTTAG+AGG | - | chr8.3:18984936-18984955 | MS.gene72992:CDS | 55.0% | |
| GTCCCATGAGCTGAGTCTAG+GGG | - | chr8.3:18983078-18983097 | MS.gene72992:intron | 55.0% | |
| GTGTCCCATGAGCTGAGTCT+AGG | - | chr8.3:18983076-18983095 | MS.gene72992:intron | 55.0% | |
| TGTGACCTCTCACCAGTGCT+TGG | + | chr8.3:18983882-18983901 | None:intergenic | 55.0% | |
| TTCCCTGTAGATTCAGGGGC+TGG | + | chr8.3:18982956-18982975 | None:intergenic | 55.0% | |
| !! | TGGCGTTGGTGAATGAGGGT+GGG | - | chr8.3:18982991-18983010 | MS.gene72992:intron | 55.0% |
| !! | TTGGCGTTGGTGAATGAGGG+TGG | - | chr8.3:18982990-18983009 | MS.gene72992:intron | 55.0% |
| CAACAGACAGGCCATCGCTG+TGG | - | chr8.3:18982081-18982100 | MS.gene72992:CDS | 60.0% | |
| CCACCAGCCCCTGAATCTAC+AGG | - | chr8.3:18982950-18982969 | MS.gene72992:intron | 60.0% | |
| CCTGTAGATTCAGGGGCTGG+TGG | + | chr8.3:18982953-18982972 | None:intergenic | 60.0% | |
| ! | CGTTGGTGAATGAGGGTGGG+TGG | - | chr8.3:18982994-18983013 | MS.gene72992:intron | 60.0% |
| ! | GTAGATTCAGGGGCTGGTGG+TGG | + | chr8.3:18982950-18982969 | None:intergenic | 60.0% |
| CATCGCTGTGGCAGCTGCCA+CGG | - | chr8.3:18982093-18982112 | MS.gene72992:CDS | 65.0% | |
| CGTGGCAGCTGCCACAGCGA+TGG | + | chr8.3:18982095-18982114 | None:intergenic | 70.0% | |
| TGTGGCAGCTGCCACGGCAG+CGG | - | chr8.3:18982099-18982118 | MS.gene72992:CDS | 70.0% | |
| AACCTCCGCAGCCGCTGCCG+TGG | + | chr8.3:18982113-18982132 | None:intergenic | 75.0% | |
| AGCTGCCACGGCAGCGGCTG+CGG | - | chr8.3:18982105-18982124 | MS.gene72992:CDS | 75.0% | |
| ! | TGCCACGGCAGCGGCTGCGG+AGG | - | chr8.3:18982108-18982127 | MS.gene72992:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 18981902 | 18985211 | 18981902 | ID=MS.gene72992 |
| chr8.3 | mRNA | 18981902 | 18985211 | 18981902 | ID=MS.gene72992.t1;Parent=MS.gene72992 |
| chr8.3 | exon | 18984858 | 18985211 | 18984858 | ID=MS.gene72992.t1.exon1;Parent=MS.gene72992.t1 |
| chr8.3 | CDS | 18984858 | 18985211 | 18984858 | ID=cds.MS.gene72992.t1;Parent=MS.gene72992.t1 |
| chr8.3 | exon | 18983081 | 18983275 | 18983081 | ID=MS.gene72992.t1.exon2;Parent=MS.gene72992.t1 |
| chr8.3 | CDS | 18983081 | 18983275 | 18983081 | ID=cds.MS.gene72992.t1;Parent=MS.gene72992.t1 |
| chr8.3 | exon | 18982715 | 18982792 | 18982715 | ID=MS.gene72992.t1.exon3;Parent=MS.gene72992.t1 |
| chr8.3 | CDS | 18982715 | 18982792 | 18982715 | ID=cds.MS.gene72992.t1;Parent=MS.gene72992.t1 |
| chr8.3 | exon | 18981902 | 18982606 | 18981902 | ID=MS.gene72992.t1.exon4;Parent=MS.gene72992.t1 |
| chr8.3 | CDS | 18981902 | 18982606 | 18981902 | ID=cds.MS.gene72992.t1;Parent=MS.gene72992.t1 |
| Gene Sequence |
| Protein sequence |
