Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76306.t1 | RHN82426.1 | 94.9 | 215 | 11 | 0 | 2 | 216 | 43 | 257 | 1.60E-105 | 392.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76306.t1 | P31165 | 86.6 | 217 | 27 | 2 | 2 | 216 | 42 | 258 | 3.5e-96 | 352.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76306.t1 | A0A396JW85 | 94.9 | 215 | 11 | 0 | 2 | 216 | 43 | 257 | 1.2e-105 | 392.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049284 | MS.gene76306 | 0.850122 | 2.08E-60 | -1.69E-46 |
| MS.gene049351 | MS.gene76306 | 0.827278 | 1.71E-54 | -1.69E-46 |
| MS.gene049389 | MS.gene76306 | 0.849298 | 3.54E-60 | -1.69E-46 |
| MS.gene049427 | MS.gene76306 | 0.817002 | 4.13E-52 | -1.69E-46 |
| MS.gene049491 | MS.gene76306 | 0.866369 | 3.00E-65 | -1.69E-46 |
| MS.gene049599 | MS.gene76306 | -0.820748 | 5.82E-53 | -1.69E-46 |
| MS.gene049614 | MS.gene76306 | 0.83191 | 1.28E-55 | -1.69E-46 |
| MS.gene049661 | MS.gene76306 | 0.853877 | 1.79E-61 | -1.69E-46 |
| MS.gene049662 | MS.gene76306 | 0.856972 | 2.24E-62 | -1.69E-46 |
| MS.gene049758 | MS.gene76306 | 0.901 | 4.17E-78 | -1.69E-46 |
| MS.gene049760 | MS.gene76306 | 0.82985 | 4.09E-55 | -1.69E-46 |
| MS.gene050076 | MS.gene76306 | 0.889257 | 2.85E-73 | -1.69E-46 |
| MS.gene050099 | MS.gene76306 | 0.837129 | 6.24E-57 | -1.69E-46 |
| MS.gene050128 | MS.gene76306 | 0.868252 | 7.50E-66 | -1.69E-46 |
| MS.gene050301 | MS.gene76306 | 0.89903 | 2.96E-77 | -1.69E-46 |
| MS.gene050397 | MS.gene76306 | 0.86427 | 1.37E-64 | -1.69E-46 |
| MS.gene050404 | MS.gene76306 | 0.866548 | 2.63E-65 | -1.69E-46 |
| MS.gene050406 | MS.gene76306 | 0.842155 | 3.07E-58 | -1.69E-46 |
| MS.gene050432 | MS.gene76306 | 0.853278 | 2.66E-61 | -1.69E-46 |
| MS.gene050464 | MS.gene76306 | 0.857797 | 1.28E-62 | -1.69E-46 |
| MS.gene050529 | MS.gene76306 | 0.892605 | 1.36E-74 | -1.69E-46 |
| MS.gene05053 | MS.gene76306 | 0.831023 | 2.11E-55 | -1.69E-46 |
| MS.gene050670 | MS.gene76306 | 0.812694 | 3.73E-51 | -1.69E-46 |
| MS.gene050767 | MS.gene76306 | 0.867801 | 1.05E-65 | -1.69E-46 |
| MS.gene050770 | MS.gene76306 | 0.87067 | 1.22E-66 | -1.69E-46 |
| MS.gene05101 | MS.gene76306 | 0.899839 | 1.33E-77 | -1.69E-46 |
| MS.gene05105 | MS.gene76306 | 0.818255 | 2.16E-52 | -1.69E-46 |
| MS.gene051228 | MS.gene76306 | 0.823902 | 1.08E-53 | -1.69E-46 |
| MS.gene051471 | MS.gene76306 | 0.897708 | 1.08E-76 | -1.69E-46 |
| MS.gene051662 | MS.gene76306 | 0.817404 | 3.36E-52 | -1.69E-46 |
| MS.gene051663 | MS.gene76306 | 0.815938 | 7.15E-52 | -1.69E-46 |
| MS.gene051860 | MS.gene76306 | 0.810443 | 1.15E-50 | -1.69E-46 |
| MS.gene051877 | MS.gene76306 | 0.80387 | 2.84E-49 | -1.69E-46 |
| MS.gene052077 | MS.gene76306 | 0.8094 | 1.93E-50 | -1.69E-46 |
| MS.gene052078 | MS.gene76306 | 0.906232 | 1.85E-80 | -1.69E-46 |
| MS.gene052178 | MS.gene76306 | 0.893018 | 9.29E-75 | -1.69E-46 |
| MS.gene052188 | MS.gene76306 | 0.866689 | 2.37E-65 | -1.69E-46 |
| MS.gene052253 | MS.gene76306 | 0.802721 | 4.90E-49 | -1.69E-46 |
| MS.gene052290 | MS.gene76306 | 0.890439 | 9.84E-74 | -1.69E-46 |
| MS.gene052293 | MS.gene76306 | 0.821399 | 4.12E-53 | -1.69E-46 |
| MS.gene052310 | MS.gene76306 | 0.891371 | 4.22E-74 | -1.69E-46 |
| MS.gene052326 | MS.gene76306 | 0.877662 | 5.25E-69 | -1.69E-46 |
| MS.gene052340 | MS.gene76306 | 0.877438 | 6.29E-69 | -1.69E-46 |
| MS.gene052379 | MS.gene76306 | 0.815529 | 8.82E-52 | -1.69E-46 |
| MS.gene053009 | MS.gene76306 | 0.815361 | 9.62E-52 | -1.69E-46 |
| MS.gene053073 | MS.gene76306 | 0.837488 | 5.05E-57 | -1.69E-46 |
| MS.gene053103 | MS.gene76306 | 0.85991 | 2.98E-63 | -1.69E-46 |
| MS.gene053104 | MS.gene76306 | 0.826249 | 3.01E-54 | -1.69E-46 |
| MS.gene053181 | MS.gene76306 | 0.826047 | 3.36E-54 | -1.69E-46 |
| MS.gene053209 | MS.gene76306 | 0.883042 | 6.27E-71 | -1.69E-46 |
| MS.gene053322 | MS.gene76306 | 0.85126 | 9.97E-61 | -1.69E-46 |
| MS.gene053384 | MS.gene76306 | 0.813622 | 2.33E-51 | -1.69E-46 |
| MS.gene053557 | MS.gene76306 | 0.889803 | 1.75E-73 | -1.69E-46 |
| MS.gene053559 | MS.gene76306 | 0.80597 | 1.03E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene76306 | 0.875519 | 2.89E-68 | -1.69E-46 |
| MS.gene053907 | MS.gene76306 | 0.843183 | 1.64E-58 | -1.69E-46 |
| MS.gene053971 | MS.gene76306 | 0.816853 | 4.46E-52 | -1.69E-46 |
| MS.gene054123 | MS.gene76306 | 0.859221 | 4.80E-63 | -1.69E-46 |
| MS.gene054376 | MS.gene76306 | 0.874631 | 5.81E-68 | -1.69E-46 |
| MS.gene05455 | MS.gene76306 | 0.829519 | 4.92E-55 | -1.69E-46 |
| MS.gene054802 | MS.gene76306 | 0.836782 | 7.65E-57 | -1.69E-46 |
| MS.gene054803 | MS.gene76306 | 0.839852 | 1.24E-57 | -1.69E-46 |
| MS.gene054804 | MS.gene76306 | 0.840248 | 9.75E-58 | -1.69E-46 |
| MS.gene054955 | MS.gene76306 | 0.816976 | 4.19E-52 | -1.69E-46 |
| MS.gene055116 | MS.gene76306 | 0.846086 | 2.71E-59 | -1.69E-46 |
| MS.gene055254 | MS.gene76306 | 0.885584 | 7.17E-72 | -1.69E-46 |
| MS.gene055277 | MS.gene76306 | 0.90138 | 2.84E-78 | -1.69E-46 |
| MS.gene055390 | MS.gene76306 | 0.851228 | 1.02E-60 | -1.69E-46 |
| MS.gene055397 | MS.gene76306 | 0.825471 | 4.60E-54 | -1.69E-46 |
| MS.gene055412 | MS.gene76306 | 0.804024 | 2.63E-49 | -1.69E-46 |
| MS.gene055422 | MS.gene76306 | 0.905687 | 3.30E-80 | -1.69E-46 |
| MS.gene055428 | MS.gene76306 | 0.876669 | 1.16E-68 | -1.69E-46 |
| MS.gene055499 | MS.gene76306 | 0.831069 | 2.06E-55 | -1.69E-46 |
| MS.gene055533 | MS.gene76306 | 0.806668 | 7.36E-50 | -1.69E-46 |
| MS.gene055604 | MS.gene76306 | 0.800052 | 1.73E-48 | -1.69E-46 |
| MS.gene055712 | MS.gene76306 | 0.815421 | 9.33E-52 | -1.69E-46 |
| MS.gene055896 | MS.gene76306 | 0.835581 | 1.54E-56 | -1.69E-46 |
| MS.gene05592 | MS.gene76306 | 0.81976 | 9.81E-53 | -1.69E-46 |
| MS.gene056191 | MS.gene76306 | 0.819529 | 1.11E-52 | -1.69E-46 |
| MS.gene056314 | MS.gene76306 | 0.856685 | 2.72E-62 | -1.69E-46 |
| MS.gene056407 | MS.gene76306 | 0.847341 | 1.23E-59 | -1.69E-46 |
| MS.gene056410 | MS.gene76306 | 0.852035 | 6.01E-61 | -1.69E-46 |
| MS.gene056609 | MS.gene76306 | 0.88688 | 2.33E-72 | -1.69E-46 |
| MS.gene056612 | MS.gene76306 | 0.902546 | 8.68E-79 | -1.69E-46 |
| MS.gene056659 | MS.gene76306 | 0.813694 | 2.25E-51 | -1.69E-46 |
| MS.gene056719 | MS.gene76306 | 0.845934 | 2.98E-59 | -1.69E-46 |
| MS.gene056796 | MS.gene76306 | 0.817797 | 2.74E-52 | -1.69E-46 |
| MS.gene056897 | MS.gene76306 | 0.810562 | 1.08E-50 | -1.69E-46 |
| MS.gene057011 | MS.gene76306 | 0.814238 | 1.71E-51 | -1.69E-46 |
| MS.gene05702 | MS.gene76306 | 0.862051 | 6.66E-64 | -1.69E-46 |
| MS.gene057123 | MS.gene76306 | 0.867689 | 1.14E-65 | -1.69E-46 |
| MS.gene057129 | MS.gene76306 | 0.834405 | 3.05E-56 | -1.69E-46 |
| MS.gene057146 | MS.gene76306 | 0.814691 | 1.35E-51 | -1.69E-46 |
| MS.gene057245 | MS.gene76306 | 0.817571 | 3.08E-52 | -1.69E-46 |
| MS.gene057295 | MS.gene76306 | 0.845872 | 3.10E-59 | -1.69E-46 |
| MS.gene05733 | MS.gene76306 | 0.839953 | 1.16E-57 | -1.69E-46 |
| MS.gene057439 | MS.gene76306 | 0.843924 | 1.04E-58 | -1.69E-46 |
| MS.gene057448 | MS.gene76306 | 0.825367 | 4.87E-54 | -1.69E-46 |
| MS.gene057449 | MS.gene76306 | 0.819047 | 1.43E-52 | -1.69E-46 |
| MS.gene057450 | MS.gene76306 | 0.845176 | 4.78E-59 | -1.69E-46 |
| MS.gene057796 | MS.gene76306 | 0.81506 | 1.12E-51 | -1.69E-46 |
| MS.gene057927 | MS.gene76306 | 0.80058 | 1.35E-48 | -1.69E-46 |
| MS.gene058002 | MS.gene76306 | 0.859268 | 4.65E-63 | -1.69E-46 |
| MS.gene058082 | MS.gene76306 | 0.902916 | 5.94E-79 | -1.69E-46 |
| MS.gene05811 | MS.gene76306 | 0.869267 | 3.52E-66 | -1.69E-46 |
| MS.gene058142 | MS.gene76306 | 0.806755 | 7.05E-50 | -1.69E-46 |
| MS.gene058233 | MS.gene76306 | 0.856884 | 2.38E-62 | -1.69E-46 |
| MS.gene058276 | MS.gene76306 | 0.823035 | 1.72E-53 | -1.69E-46 |
| MS.gene058293 | MS.gene76306 | 0.875531 | 2.86E-68 | -1.69E-46 |
| MS.gene058365 | MS.gene76306 | 0.838309 | 3.10E-57 | -1.69E-46 |
| MS.gene058660 | MS.gene76306 | 0.899067 | 2.86E-77 | -1.69E-46 |
| MS.gene058787 | MS.gene76306 | 0.831229 | 1.88E-55 | -1.69E-46 |
| MS.gene058845 | MS.gene76306 | 0.860325 | 2.23E-63 | -1.69E-46 |
| MS.gene058928 | MS.gene76306 | 0.825815 | 3.82E-54 | -1.69E-46 |
| MS.gene05907 | MS.gene76306 | 0.866264 | 3.24E-65 | -1.69E-46 |
| MS.gene059228 | MS.gene76306 | 0.836988 | 6.78E-57 | -1.69E-46 |
| MS.gene059294 | MS.gene76306 | 0.81848 | 1.92E-52 | -1.69E-46 |
| MS.gene059326 | MS.gene76306 | 0.867573 | 1.24E-65 | -1.69E-46 |
| MS.gene059342 | MS.gene76306 | 0.828672 | 7.89E-55 | -1.69E-46 |
| MS.gene059518 | MS.gene76306 | 0.868066 | 8.61E-66 | -1.69E-46 |
| MS.gene059536 | MS.gene76306 | 0.841774 | 3.88E-58 | -1.69E-46 |
| MS.gene059597 | MS.gene76306 | 0.905596 | 3.63E-80 | -1.69E-46 |
| MS.gene05959 | MS.gene76306 | 0.870043 | 1.97E-66 | -1.69E-46 |
| MS.gene059676 | MS.gene76306 | 0.888164 | 7.52E-73 | -1.69E-46 |
| MS.gene059688 | MS.gene76306 | 0.870874 | 1.05E-66 | -1.69E-46 |
| MS.gene059692 | MS.gene76306 | 0.891155 | 5.14E-74 | -1.69E-46 |
| MS.gene059695 | MS.gene76306 | 0.884062 | 2.64E-71 | -1.69E-46 |
| MS.gene059708 | MS.gene76306 | 0.844485 | 7.34E-59 | -1.69E-46 |
| MS.gene059711 | MS.gene76306 | 0.800524 | 1.38E-48 | -1.69E-46 |
| MS.gene05984 | MS.gene76306 | 0.863329 | 2.69E-64 | -1.69E-46 |
| MS.gene059894 | MS.gene76306 | 0.927433 | 1.18E-91 | -1.69E-46 |
| MS.gene059899 | MS.gene76306 | 0.8501 | 2.11E-60 | -1.69E-46 |
| MS.gene059960 | MS.gene76306 | 0.865339 | 6.35E-65 | -1.69E-46 |
| MS.gene059974 | MS.gene76306 | 0.83001 | 3.74E-55 | -1.69E-46 |
| MS.gene060005 | MS.gene76306 | 0.833439 | 5.33E-56 | -1.69E-46 |
| MS.gene06037 | MS.gene76306 | 0.858031 | 1.09E-62 | -1.69E-46 |
| MS.gene060407 | MS.gene76306 | 0.833073 | 6.58E-56 | -1.69E-46 |
| MS.gene060476 | MS.gene76306 | 0.820364 | 7.13E-53 | -1.69E-46 |
| MS.gene060495 | MS.gene76306 | 0.816762 | 4.68E-52 | -1.69E-46 |
| MS.gene060496 | MS.gene76306 | 0.802725 | 4.89E-49 | -1.69E-46 |
| MS.gene060804 | MS.gene76306 | 0.841654 | 4.17E-58 | -1.69E-46 |
| MS.gene060818 | MS.gene76306 | 0.836063 | 1.17E-56 | -1.69E-46 |
| MS.gene06090 | MS.gene76306 | 0.823935 | 1.06E-53 | -1.69E-46 |
| MS.gene061041 | MS.gene76306 | 0.836304 | 1.01E-56 | -1.69E-46 |
| MS.gene061049 | MS.gene76306 | 0.903751 | 2.51E-79 | -1.69E-46 |
| MS.gene061051 | MS.gene76306 | -0.871754 | 5.37E-67 | -1.69E-46 |
| MS.gene061112 | MS.gene76306 | 0.842009 | 3.36E-58 | -1.69E-46 |
| MS.gene061200 | MS.gene76306 | 0.833813 | 4.30E-56 | -1.69E-46 |
| MS.gene061265 | MS.gene76306 | 0.834966 | 2.21E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76306.t1 | MTR_1g110750 | 94.419 | 215 | 12 | 0 | 2 | 216 | 43 | 257 | 8.31e-145 | 404 |
| MS.gene76306.t1 | MTR_1g085490 | 34.899 | 149 | 78 | 7 | 37 | 177 | 74 | 211 | 2.85e-12 | 64.7 |
| MS.gene76306.t1 | MTR_1g031890 | 34.899 | 149 | 78 | 7 | 37 | 177 | 74 | 211 | 3.06e-12 | 64.7 |
| MS.gene76306.t1 | MTR_1g031890 | 34.899 | 149 | 78 | 7 | 37 | 177 | 74 | 211 | 3.33e-12 | 64.3 |
| MS.gene76306.t1 | MTR_4g118060 | 34.899 | 149 | 78 | 7 | 37 | 177 | 74 | 211 | 3.37e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76306.t1 | AT3G25920 | 77.612 | 201 | 43 | 1 | 2 | 202 | 60 | 258 | 1.81e-108 | 313 |
Find 58 sgRNAs with CRISPR-Local
Find 395 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGGTTTCGGTTGGACAATT+TGG | 0.209684 | 1.1:+78194410 | MS.gene76306:CDS |
| CAAGGAGCGAGTTGTGGTTT+TGG | 0.247810 | 1.1:+78194492 | MS.gene76306:CDS |
| TCCTGCAATTCCTCTAAGTT+TGG | 0.258498 | 1.1:-78194598 | None:intergenic |
| CGGTTTCGGTTGGACAATTT+GGG | 0.284648 | 1.1:+78194411 | MS.gene76306:CDS |
| AGCAGCTGCTTCTCGCTTCT+TGG | 0.291577 | 1.1:-78199195 | None:intergenic |
| TTGCATATTTAAACAGAATC+TGG | 0.313222 | 1.1:-78199224 | None:intergenic |
| CGACGATTGCCCAAACTTAG+AGG | 0.316218 | 1.1:+78194588 | MS.gene76306:CDS |
| AGATTGATGTGGACATATTT+CGG | 0.336604 | 1.1:-78195597 | None:intergenic |
| CTCCTTTGCTGATGTGGAAA+AGG | 0.349946 | 1.1:-78199069 | None:intergenic |
| CTCTTTCTTGAACCTGGTTG+TGG | 0.358662 | 1.1:-78194435 | None:intergenic |
| TGTTCCATCACTGTGATTCC+TGG | 0.369456 | 1.1:+78199110 | MS.gene76306:CDS |
| CCCAAACTTAGAGGAATTGC+AGG | 0.376415 | 1.1:+78194597 | MS.gene76306:CDS |
| TGATTCCTGGCCGTAAGAAA+TGG | 0.380224 | 1.1:+78199123 | MS.gene76306:CDS |
| CCTGCAATTCCTCTAAGTTT+GGG | 0.397805 | 1.1:-78194597 | None:intergenic |
| GAAATATGTCCACATCAATC+TGG | 0.400269 | 1.1:+78195599 | MS.gene76306:CDS |
| TTTGCTCTCTTTCTTGAACC+TGG | 0.419614 | 1.1:-78194441 | None:intergenic |
| AAGTTTCTCCTTTGCTGATG+TGG | 0.426566 | 1.1:-78199075 | None:intergenic |
| TAATAAGGCTGCTTCTGCTT+CGG | 0.436199 | 1.1:+78194365 | MS.gene76306:CDS |
| AAGAAAGAGAGCAAAGAGAA+AGG | 0.443452 | 1.1:+78194449 | MS.gene76306:CDS |
| ATGGCTTAACCCATTTCTTA+CGG | 0.452810 | 1.1:-78199133 | None:intergenic |
| AACCAGCAGGTGAAAATGTT+CGG | 0.456863 | 1.1:+78194391 | MS.gene76306:CDS |
| AGAAGGGGAAGAGGTGTCTC+TGG | 0.461261 | 1.1:+78195647 | MS.gene76306:CDS |
| CAGGTGAAAATGTTCGGTTT+CGG | 0.473561 | 1.1:+78194397 | MS.gene76306:CDS |
| GACAATTTGGGTCCACAACC+AGG | 0.479320 | 1.1:+78194423 | MS.gene76306:CDS |
| AGAAAGAGAGCAAAGAGAAA+GGG | 0.484644 | 1.1:+78194450 | MS.gene76306:CDS |
| TGAAAATGTTCGGTTTCGGT+TGG | 0.487169 | 1.1:+78194401 | MS.gene76306:CDS |
| TTAACCCATTTCTTACGGCC+AGG | 0.492636 | 1.1:-78199128 | None:intergenic |
| GGAACGGAAACTTCTATTGA+AGG | 0.496485 | 1.1:+78195710 | MS.gene76306:CDS |
| AGTTTCCGTTCCCTTCCTGA+TGG | 0.497026 | 1.1:-78195699 | None:intergenic |
| ACATAATAAGGTATGCATGC+TGG | 0.501018 | 1.1:+78195570 | MS.gene76306:intron |
| TCTGCTTCGGTGAAACCAGC+AGG | 0.507750 | 1.1:+78194378 | MS.gene76306:CDS |
| AGAGCAAAGAGAAAGGGAAG+AGG | 0.509714 | 1.1:+78194456 | MS.gene76306:CDS |
| GATTCCTGGCCGTAAGAAAT+GGG | 0.511756 | 1.1:+78199124 | MS.gene76306:CDS |
| GAAGATGCTGGATTTCAAGA+AGG | 0.525528 | 1.1:+78195630 | MS.gene76306:CDS |
| AAGGAGAAACTTGAGTCTGC+TGG | 0.526406 | 1.1:+78199086 | MS.gene76306:CDS |
| CTGGGAGACATAGAAGATGC+TGG | 0.529748 | 1.1:+78195618 | MS.gene76306:CDS |
| AAACGTGTGATTAACCCATC+AGG | 0.531753 | 1.1:+78195684 | MS.gene76306:CDS |
| AAGATGCTGGATTTCAAGAA+GGG | 0.537870 | 1.1:+78195631 | MS.gene76306:CDS |
| GTTTCCGTTCCCTTCCTGAT+GGG | 0.539207 | 1.1:-78195698 | None:intergenic |
| AAATATGTCCACATCAATCT+GGG | 0.544105 | 1.1:+78195600 | MS.gene76306:CDS |
| AGAGGTATTGCCGCAGGACA+AGG | 0.557884 | 1.1:+78194474 | MS.gene76306:CDS |
| TTGGGCAATCGTCGATAAAG+TGG | 0.564517 | 1.1:-78194579 | None:intergenic |
| AAGAAGTTGACAATAAAAGC+TGG | 0.573815 | 1.1:+78199044 | MS.gene76306:CDS |
| GCAGGACAAGGAGCGAGTTG+TGG | 0.577933 | 1.1:+78194486 | MS.gene76306:CDS |
| TGGATTTCAAGAAGGGGAAG+AGG | 0.578835 | 1.1:+78195638 | MS.gene76306:CDS |
| AAGGGAAGAGGTATTGCCGC+AGG | 0.588347 | 1.1:+78194468 | MS.gene76306:CDS |
| GGTGTCTCTGGAGACACTGA+CGG | 0.598433 | 1.1:+78195659 | MS.gene76306:CDS |
| GTGTGATTAACCCATCAGGA+AGG | 0.611754 | 1.1:+78195688 | MS.gene76306:CDS |
| CTATGTCTCCCAGATTGATG+TGG | 0.622447 | 1.1:-78195608 | None:intergenic |
| CTTCTTGGCGAAGTATTCGT+CGG | 0.627986 | 1.1:-78199180 | None:intergenic |
| ACGGCCAGGAATCACAGTGA+TGG | 0.630385 | 1.1:-78199114 | None:intergenic |
| TGTGATTAACCCATCAGGAA+GGG | 0.634878 | 1.1:+78195689 | MS.gene76306:CDS |
| TCTGGACCTGGTATCATGAG+AGG | 0.634957 | 1.1:+78194537 | MS.gene76306:CDS |
| TCAAAACCTCTCATGATACC+AGG | 0.646172 | 1.1:-78194543 | None:intergenic |
| TTAACCCATCAGGAAGGGAA+CGG | 0.658603 | 1.1:+78195694 | MS.gene76306:CDS |
| AGATGCTGGATTTCAAGAAG+GGG | 0.662527 | 1.1:+78195632 | MS.gene76306:CDS |
| ACAACTCGCTCCTTGTCCTG+CGG | 0.686055 | 1.1:-78194484 | None:intergenic |
| AAACTTAGAGGAATTGCAGG+AGG | 0.696930 | 1.1:+78194600 | MS.gene76306:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAATTAAATGTACATTTA+GGG | - | chr1.1:78196461-78196480 | None:intergenic | 10.0% |
| !!! | TACACAATATATTTTTAAAA+AGG | + | chr1.1:78198959-78198978 | MS.gene76306:intron | 10.0% |
| !!! | TTTTAATTAAATGTACATTT+AGG | - | chr1.1:78196462-78196481 | None:intergenic | 10.0% |
| !! | AATTTCAACAATAAAACAAT+AGG | - | chr1.1:78194657-78194676 | None:intergenic | 15.0% |
| !! | GAATTATATTAGGATAATTT+AGG | + | chr1.1:78195006-78195025 | MS.gene76306:intron | 15.0% |
| !!! | AAAAGCAATTATTTTATGAA+AGG | + | chr1.1:78195436-78195455 | MS.gene76306:intron | 15.0% |
| !!! | GAAAATAATGTTTTTAACTA+TGG | + | chr1.1:78194694-78194713 | MS.gene76306:intron | 15.0% |
| !!! | GATTATTTTAGATTAACTAT+AGG | - | chr1.1:78196254-78196273 | None:intergenic | 15.0% |
| !!! | TATTAATCTTTTTCACTTTA+AGG | + | chr1.1:78197863-78197882 | MS.gene76306:intron | 15.0% |
| !! | AAAGAGTTAAAGTTAGTTAA+TGG | + | chr1.1:78196111-78196130 | MS.gene76306:intron | 20.0% |
| !! | AAATATCAATTTCTGTCTAT+TGG | + | chr1.1:78196479-78196498 | MS.gene76306:intron | 20.0% |
| !! | ACCAGATAGAATATTTAAAA+GGG | + | chr1.1:78196900-78196919 | MS.gene76306:intron | 20.0% |
| !! | GAGAATTCAAGAATATAAAA+TGG | + | chr1.1:78197047-78197066 | MS.gene76306:intron | 20.0% |
| !! | TACCAGATAGAATATTTAAA+AGG | + | chr1.1:78196899-78196918 | MS.gene76306:intron | 20.0% |
| !! | TTTCATATTATGCCTTTAAT+CGG | + | chr1.1:78195954-78195973 | MS.gene76306:intron | 20.0% |
| !!! | AATAATGTTTTTAACTATGG+CGG | + | chr1.1:78194697-78194716 | MS.gene76306:intron | 20.0% |
| !!! | ATTTCTAAAGTGATATTTAG+CGG | + | chr1.1:78198600-78198619 | MS.gene76306:intron | 20.0% |
| !!! | CTTTGAAAATCAACATATTA+GGG | - | chr1.1:78195224-78195243 | None:intergenic | 20.0% |
| !!! | GGATTTTGTTGAATTATATT+AGG | + | chr1.1:78194996-78195015 | MS.gene76306:intron | 20.0% |
| !!! | TATTTTCAACAAGAGAAATA+AGG | + | chr1.1:78196290-78196309 | MS.gene76306:intron | 20.0% |
| !!! | TCTTTGAAAATCAACATATT+AGG | - | chr1.1:78195225-78195244 | None:intergenic | 20.0% |
| !!! | TTCACTTTTAAAAACAAATG+AGG | + | chr1.1:78195840-78195859 | MS.gene76306:intron | 20.0% |
| ! | AAAAGGAAAAGATGTCTTTA+TGG | + | chr1.1:78197227-78197246 | MS.gene76306:intron | 25.0% |
| ! | AAAGGAAAAGATGTCTTTAT+GGG | + | chr1.1:78197228-78197247 | MS.gene76306:intron | 25.0% |
| ! | AATAAAAAAGATTACCGAAC+AGG | + | chr1.1:78197152-78197171 | MS.gene76306:intron | 25.0% |
| ! | AGAAGTCTTTCTTGATATAT+GGG | - | chr1.1:78195886-78195905 | None:intergenic | 25.0% |
| ! | ATAAAAAAGATTACCGAACA+GGG | + | chr1.1:78197153-78197172 | MS.gene76306:intron | 25.0% |
| ! | CAATTTCAAACAACTTATAC+AGG | + | chr1.1:78198842-78198861 | MS.gene76306:intron | 25.0% |
| ! | CATTTCAAGATGTCAATAAA+GGG | - | chr1.1:78195262-78195281 | None:intergenic | 25.0% |
| ! | CTCTTGTTGAAAATATGTTT+AGG | - | chr1.1:78196285-78196304 | None:intergenic | 25.0% |
| ! | GTATATCATTGAAGATTATG+TGG | + | chr1.1:78196529-78196548 | MS.gene76306:intron | 25.0% |
| ! | GTTGTCTATAAATAAGAAGA+GGG | + | chr1.1:78196316-78196335 | MS.gene76306:intron | 25.0% |
| ! | TAGTCTATATACTACCAAAT+GGG | + | chr1.1:78194833-78194852 | MS.gene76306:intron | 25.0% |
| ! | TCATTAGTAGGAAAAAACAA+TGG | + | chr1.1:78195073-78195092 | MS.gene76306:intron | 25.0% |
| ! | TGATGTGTCATAATGTTATT+AGG | + | chr1.1:78196759-78196778 | MS.gene76306:intron | 25.0% |
| ! | TGTCAGATTCTAAACATATT+TGG | - | chr1.1:78197459-78197478 | None:intergenic | 25.0% |
| ! | TGTTGTCTATAAATAAGAAG+AGG | + | chr1.1:78196315-78196334 | MS.gene76306:intron | 25.0% |
| ! | TTAAACTCCATGTGAAAAAA+GGG | - | chr1.1:78194974-78194993 | None:intergenic | 25.0% |
| ! | TTAGTCTATATACTACCAAA+TGG | + | chr1.1:78194832-78194851 | MS.gene76306:intron | 25.0% |
| ! | TTATTAACAACAAAAACACG+AGG | - | chr1.1:78194351-78194370 | None:intergenic | 25.0% |
| ! | TTATTGTCTAAAGAGAATCA+TGG | + | chr1.1:78195286-78195305 | MS.gene76306:intron | 25.0% |
| ! | TTTAAACTCCATGTGAAAAA+AGG | - | chr1.1:78194975-78194994 | None:intergenic | 25.0% |
| ! | TTTCATATGAAATAGGTGTT+GGG | + | chr1.1:78196654-78196673 | MS.gene76306:intron | 25.0% |
| !! | AAAGTTAGTTAATGGATGTT+GGG | + | chr1.1:78196119-78196138 | MS.gene76306:intron | 25.0% |
| !! | AATATTTTCCTGAGTTTATG+AGG | - | chr1.1:78198805-78198824 | None:intergenic | 25.0% |
| !! | ACCCTTTTAAATATTCTATC+TGG | - | chr1.1:78196904-78196923 | None:intergenic | 25.0% |
| !! | TAAAGTTAGTTAATGGATGT+TGG | + | chr1.1:78196118-78196137 | MS.gene76306:intron | 25.0% |
| !! | TAAGTTCAAACGCAATATTT+TGG | + | chr1.1:78196026-78196045 | MS.gene76306:intron | 25.0% |
| !! | TAGAATAAGGTATCAATTTG+TGG | - | chr1.1:78197820-78197839 | None:intergenic | 25.0% |
| !! | TGAATTTGAAACTGTAAAGT+TGG | + | chr1.1:78196066-78196085 | MS.gene76306:intron | 25.0% |
| !! | TTAAAAGGGTTTTTCTTGAA+AGG | + | chr1.1:78196914-78196933 | MS.gene76306:intron | 25.0% |
| !! | TTCGTAGATATGAAAAGTAT+TGG | - | chr1.1:78198568-78198587 | None:intergenic | 25.0% |
| !! | TTTTCATATGAAATAGGTGT+TGG | + | chr1.1:78196653-78196672 | MS.gene76306:intron | 25.0% |
| !! | TTTTTCACATGGAGTTTAAA+TGG | + | chr1.1:78194975-78194994 | MS.gene76306:intron | 25.0% |
| !!! | AATTCTATTTCTAAGTTGGT+TGG | - | chr1.1:78198082-78198101 | None:intergenic | 25.0% |
| !!! | CTTTTAAAAACAAATGAGGA+TGG | + | chr1.1:78195844-78195863 | MS.gene76306:intron | 25.0% |
| !!! | GAGGTATTTTCATATGAAAT+AGG | + | chr1.1:78196647-78196666 | MS.gene76306:intron | 25.0% |
| !!! | TCGTGTTTTTGTTGTTAATA+AGG | + | chr1.1:78194350-78194369 | MS.gene76306:CDS | 25.0% |
| !!! | TCTTGTCATTTTAGTATAGT+CGG | + | chr1.1:78196362-78196381 | MS.gene76306:intron | 25.0% |
| !!! | TCTTTTTCACTTTAAGGATA+AGG | + | chr1.1:78197869-78197888 | MS.gene76306:intron | 25.0% |
| !!! | TTGCTTTTGAAATGAAATCA+TGG | - | chr1.1:78195424-78195443 | None:intergenic | 25.0% |
| !!! | TTTTGAAATGAAATCATGGA+AGG | - | chr1.1:78195420-78195439 | None:intergenic | 25.0% |
| AAAGAGAATCATGGCAATTA+TGG | + | chr1.1:78195295-78195314 | MS.gene76306:intron | 30.0% | |
| AAATATGTCCACATCAATCT+GGG | + | chr1.1:78195600-78195619 | MS.gene76306:CDS | 30.0% | |
| AAATGAGTGAAGAAAAGAGT+CGG | + | chr1.1:78197002-78197021 | MS.gene76306:intron | 30.0% | |
| AAATGGAGAAGTAAGAAGAA+AGG | + | chr1.1:78197064-78197083 | MS.gene76306:intron | 30.0% | |
| AACATGTAAGACAACAACTA+AGG | - | chr1.1:78195776-78195795 | None:intergenic | 30.0% | |
| AACCAAAATTCTCCGATTAA+AGG | - | chr1.1:78195969-78195988 | None:intergenic | 30.0% | |
| AACTACTACATCAAGCTAAA+AGG | + | chr1.1:78197782-78197801 | MS.gene76306:intron | 30.0% | |
| AACTTTATTCACGATAGACA+AGG | - | chr1.1:78195920-78195939 | None:intergenic | 30.0% | |
| AAGAAGAAAGGTGAAAGAAA+TGG | + | chr1.1:78197076-78197095 | MS.gene76306:intron | 30.0% | |
| AAGAAGTTGACAATAAAAGC+TGG | + | chr1.1:78199044-78199063 | MS.gene76306:CDS | 30.0% | |
| AAGACTTCCTTTATAAGAAG+AGG | + | chr1.1:78197643-78197662 | MS.gene76306:intron | 30.0% | |
| AATGAAATCATGGAAGGATA+TGG | - | chr1.1:78195414-78195433 | None:intergenic | 30.0% | |
| ACATGTAAGACAACAACTAA+GGG | - | chr1.1:78195775-78195794 | None:intergenic | 30.0% | |
| ACTACTACATCAAGCTAAAA+GGG | + | chr1.1:78197783-78197802 | MS.gene76306:intron | 30.0% | |
| ACTTCTAATTAGTCATGCAT+TGG | + | chr1.1:78198886-78198905 | MS.gene76306:intron | 30.0% | |
| ACTTTAACTCTTTCAACCAA+CGG | - | chr1.1:78196104-78196123 | None:intergenic | 30.0% | |
| ACTTTATTCACGATAGACAA+GGG | - | chr1.1:78195919-78195938 | None:intergenic | 30.0% | |
| AGAAGAGCTCTTTCAAATAA+TGG | - | chr1.1:78198777-78198796 | None:intergenic | 30.0% | |
| AGATTGATGTGGACATATTT+CGG | - | chr1.1:78195600-78195619 | None:intergenic | 30.0% | |
| AGGAAGAGAAATTTAGGTAT+TGG | - | chr1.1:78195335-78195354 | None:intergenic | 30.0% | |
| ATACCCAACAAAATACCAAA+TGG | - | chr1.1:78196812-78196831 | None:intergenic | 30.0% | |
| ATGACTTTCAAATGTGATGT+AGG | - | chr1.1:78195158-78195177 | None:intergenic | 30.0% | |
| ATTATTTGAAAGAGCTCTTC+TGG | + | chr1.1:78198776-78198795 | MS.gene76306:intron | 30.0% | |
| ATTTCTGTCTATTGGTATCA+AGG | + | chr1.1:78196487-78196506 | MS.gene76306:intron | 30.0% | |
| CAAACATGCATAAACTTCTA+GGG | + | chr1.1:78198231-78198250 | MS.gene76306:intron | 30.0% | |
| CAGAGTTTCACAATTTGTAA+TGG | - | chr1.1:78197351-78197370 | None:intergenic | 30.0% | |
| CCATTTCAAGATGTCAATAA+AGG | - | chr1.1:78195263-78195282 | None:intergenic | 30.0% | |
| CCTTTATTGACATCTTGAAA+TGG | + | chr1.1:78195260-78195279 | MS.gene76306:intron | 30.0% | |
| CTGTAAAGTTGGAATATAAG+AGG | + | chr1.1:78196077-78196096 | MS.gene76306:intron | 30.0% | |
| CTTCTAATTAGTCATGCATT+GGG | + | chr1.1:78198887-78198906 | MS.gene76306:intron | 30.0% | |
| GAAGTCTTTCTTGATATATG+GGG | - | chr1.1:78195885-78195904 | None:intergenic | 30.0% | |
| GAGAAGTCTTTCTTGATATA+TGG | - | chr1.1:78195887-78195906 | None:intergenic | 30.0% | |
| GATATATACAACAGCATATC+CGG | - | chr1.1:78195202-78195221 | None:intergenic | 30.0% | |
| GTATCTACCTCTTCTTATAA+AGG | - | chr1.1:78197653-78197672 | None:intergenic | 30.0% | |
| TAAAAAAGATTACCGAACAG+GGG | + | chr1.1:78197154-78197173 | MS.gene76306:intron | 30.0% | |
| TACCCAACAAAATACCAAAT+GGG | - | chr1.1:78196811-78196830 | None:intergenic | 30.0% | |
| TATATATAAGAAGAGGCTGA+AGG | + | chr1.1:78197997-78198016 | MS.gene76306:intron | 30.0% | |
| TATCATTGAAGATTATGTGG+CGG | + | chr1.1:78196532-78196551 | MS.gene76306:intron | 30.0% | |
| TGCTCTACATGAATAATACT+TGG | - | chr1.1:78197685-78197704 | None:intergenic | 30.0% | |
| TGCTGTCTATATATAAGAAG+AGG | + | chr1.1:78197990-78198009 | MS.gene76306:intron | 30.0% | |
| TGTTGGATTGTATTTCAAAG+AGG | + | chr1.1:78197575-78197594 | MS.gene76306:intron | 30.0% | |
| TTAGGGAAAATTTCCTTGTA+TGG | - | chr1.1:78196444-78196463 | None:intergenic | 30.0% | |
| TTGACAGTGTAATTCAATGA+TGG | + | chr1.1:78194730-78194749 | MS.gene76306:intron | 30.0% | |
| TTTCTTTCATTCTTTGTCGT+AGG | + | chr1.1:78195461-78195480 | MS.gene76306:intron | 30.0% | |
| TTTCTTTGAGCCTTACAAAA+CGG | - | chr1.1:78196190-78196209 | None:intergenic | 30.0% | |
| ! | AACCCATTTGGTATTTTGTT+GGG | + | chr1.1:78196806-78196825 | MS.gene76306:intron | 30.0% |
| ! | AATAAGAATAAAGGCACACA+TGG | + | chr1.1:78196556-78196575 | MS.gene76306:intron | 30.0% |
| ! | AATATAATTTGCCCGCTAAT+AGG | + | chr1.1:78194945-78194964 | MS.gene76306:intron | 30.0% |
| ! | AATTTAGGATCCTACTGTTA+GGG | + | chr1.1:78195021-78195040 | MS.gene76306:intron | 30.0% |
| ! | ATTGTTTTCATGATGTCTAG+AGG | + | chr1.1:78195806-78195825 | MS.gene76306:intron | 30.0% |
| ! | TAACCCATTTGGTATTTTGT+TGG | + | chr1.1:78196805-78196824 | MS.gene76306:intron | 30.0% |
| ! | TAATTTAGGATCCTACTGTT+AGG | + | chr1.1:78195020-78195039 | MS.gene76306:intron | 30.0% |
| ! | TCTAGCATCATGAATTTTGT+TGG | + | chr1.1:78198666-78198685 | MS.gene76306:intron | 30.0% |
| ! | TTTTCCTTCACAAAGCTTAT+AGG | - | chr1.1:78198164-78198183 | None:intergenic | 30.0% |
| !! | AAATTTAGGTATTGGAAGCT+TGG | - | chr1.1:78195327-78195346 | None:intergenic | 30.0% |
| !! | AATAATAGTTTGTTGTGCTC+TGG | + | chr1.1:78198991-78199010 | MS.gene76306:intron | 30.0% |
| !! | ACACATTACTTGTTGGTTTA+TGG | + | chr1.1:78195734-78195753 | MS.gene76306:intron | 30.0% |
| !! | GAGCAATTCTATTTCTAAGT+TGG | - | chr1.1:78198086-78198105 | None:intergenic | 30.0% |
| !! | TAAACATGAAGATGGATTGT+TGG | + | chr1.1:78197558-78197577 | MS.gene76306:intron | 30.0% |
| !!! | CTTGTCATTTTAGTATAGTC+GGG | + | chr1.1:78196363-78196382 | MS.gene76306:intron | 30.0% |
| !!! | CTTGTTATTTTGATAGAGCT+GGG | + | chr1.1:78198028-78198047 | MS.gene76306:intron | 30.0% |
| !!! | TCTTGTTATTTTGATAGAGC+TGG | + | chr1.1:78198027-78198046 | MS.gene76306:intron | 30.0% |
| !!! | TTGTCATTTTAGTATAGTCG+GGG | + | chr1.1:78196364-78196383 | MS.gene76306:intron | 30.0% |
| AAAAAAGGGCAACCTATTAG+CGG | - | chr1.1:78194960-78194979 | None:intergenic | 35.0% | |
| AAAGAAACTGTAGCATGTTC+TGG | + | chr1.1:78198626-78198645 | MS.gene76306:intron | 35.0% | |
| AAGAAAGAGAGCAAAGAGAA+AGG | + | chr1.1:78194449-78194468 | MS.gene76306:CDS | 35.0% | |
| AAGATGCTGGATTTCAAGAA+GGG | + | chr1.1:78195631-78195650 | MS.gene76306:CDS | 35.0% | |
| AATCTGACAACTTCAACCTT+TGG | + | chr1.1:78197470-78197489 | MS.gene76306:intron | 35.0% | |
| ACATAATAAGGTATGCATGC+TGG | + | chr1.1:78195570-78195589 | MS.gene76306:intron | 35.0% | |
| ACATATAATACGCTACCAAG+TGG | + | chr1.1:78198718-78198737 | MS.gene76306:intron | 35.0% | |
| ACTATTGGAGGAGATGAATT+TGG | + | chr1.1:78196969-78196988 | MS.gene76306:intron | 35.0% | |
| AGAAAGAGAGCAAAGAGAAA+GGG | + | chr1.1:78194450-78194469 | MS.gene76306:CDS | 35.0% | |
| ATCAATTTGACATACAGGTC+AGG | + | chr1.1:78196863-78196882 | MS.gene76306:intron | 35.0% | |
| ATCATTGAAGATTATGTGGC+GGG | + | chr1.1:78196533-78196552 | MS.gene76306:intron | 35.0% | |
| ATCTCTTCTTACACAACACT+TGG | + | chr1.1:78194624-78194643 | MS.gene76306:intron | 35.0% | |
| ATCTGACAACTTCAACCTTT+GGG | + | chr1.1:78197471-78197490 | MS.gene76306:intron | 35.0% | |
| ATGGCTTAACCCATTTCTTA+CGG | - | chr1.1:78199136-78199155 | None:intergenic | 35.0% | |
| ATTGATGAGAGGCAGATTAA+TGG | + | chr1.1:78197618-78197637 | MS.gene76306:intron | 35.0% | |
| CAAGAAAGACTTCTCATATG+AGG | + | chr1.1:78195892-78195911 | MS.gene76306:intron | 35.0% | |
| CAAGGATCAATTTGACATAC+AGG | + | chr1.1:78196858-78196877 | MS.gene76306:intron | 35.0% | |
| CATATAATACGCTACCAAGT+GGG | + | chr1.1:78198719-78198738 | MS.gene76306:intron | 35.0% | |
| CTAACAGAAGTGGAATGAAA+AGG | + | chr1.1:78197210-78197229 | MS.gene76306:intron | 35.0% | |
| CTACTTGTAGCATCATTAGT+AGG | + | chr1.1:78195061-78195080 | MS.gene76306:intron | 35.0% | |
| GAAATATGTCCACATCAATC+TGG | + | chr1.1:78195599-78195618 | MS.gene76306:CDS | 35.0% | |
| GAAATGGAGTGAAATGACTA+TGG | + | chr1.1:78197092-78197111 | MS.gene76306:intron | 35.0% | |
| GAACTGAGGAAGAGAAATTT+AGG | - | chr1.1:78195341-78195360 | None:intergenic | 35.0% | |
| GAAGGATATGGAAGAATAAG+GGG | - | chr1.1:78195402-78195421 | None:intergenic | 35.0% | |
| GCAAACATGCATAAACTTCT+AGG | + | chr1.1:78198230-78198249 | MS.gene76306:intron | 35.0% | |
| GCATTCTTTACCTTACAAAC+TGG | - | chr1.1:78198373-78198392 | None:intergenic | 35.0% | |
| GGAAAACTACAGAACTTCAA+AGG | - | chr1.1:78196423-78196442 | None:intergenic | 35.0% | |
| GGAAGGATATGGAAGAATAA+GGG | - | chr1.1:78195403-78195422 | None:intergenic | 35.0% | |
| GTCAAGCATAATAAGAACTG+AGG | - | chr1.1:78195355-78195374 | None:intergenic | 35.0% | |
| GTGAAGGAAAATAACATGCT+CGG | + | chr1.1:78198173-78198192 | MS.gene76306:intron | 35.0% | |
| GTGAGGAAGTAATTTCAGTT+GGG | + | chr1.1:78196591-78196610 | MS.gene76306:intron | 35.0% | |
| TACATAATCAATCTGCAACC+AGG | - | chr1.1:78195122-78195141 | None:intergenic | 35.0% | |
| TCAATTTGACATACAGGTCA+GGG | + | chr1.1:78196864-78196883 | MS.gene76306:intron | 35.0% | |
| TCATGAAGTAAGCCTATTAC+AGG | + | chr1.1:78195174-78195193 | MS.gene76306:intron | 35.0% | |
| TCTCTTCTTACACAACACTT+GGG | + | chr1.1:78194625-78194644 | MS.gene76306:intron | 35.0% | |
| TGAGGAAGTAATTTCAGTTG+GGG | + | chr1.1:78196592-78196611 | MS.gene76306:intron | 35.0% | |
| TGAGTTAAGCTTGTAGTTTG+TGG | + | chr1.1:78197939-78197958 | MS.gene76306:intron | 35.0% | |
| TGGAAGGATATGGAAGAATA+AGG | - | chr1.1:78195404-78195423 | None:intergenic | 35.0% | |
| TGTGTTGGATCAACAAGTTT+GGG | + | chr1.1:78196625-78196644 | MS.gene76306:intron | 35.0% | |
| TTCATGTTTAGCAACAGCAT+AGG | - | chr1.1:78197548-78197567 | None:intergenic | 35.0% | |
| TTGATACACCTGTTAGTTGA+AGG | + | chr1.1:78197912-78197931 | MS.gene76306:intron | 35.0% | |
| ! | AAAAGTGTGCTCTTGTACAA+AGG | + | chr1.1:78197317-78197336 | MS.gene76306:intron | 35.0% |
| ! | AAGGGTTTTTCTTGAAAGGA+CGG | + | chr1.1:78196918-78196937 | MS.gene76306:intron | 35.0% |
| ! | ATAATCGAGTCCGTTTTGTA+AGG | + | chr1.1:78196177-78196196 | MS.gene76306:intron | 35.0% |
| ! | CTTTTCATTCCACTTCTGTT+AGG | - | chr1.1:78197212-78197231 | None:intergenic | 35.0% |
| ! | GAGTTAAGCTTGTAGTTTGT+GGG | + | chr1.1:78197940-78197959 | MS.gene76306:intron | 35.0% |
| ! | GTTCTGTAGTTTTCCATACA+AGG | + | chr1.1:78196428-78196447 | MS.gene76306:intron | 35.0% |
| ! | TGAAGGTACACATTACTTGT+TGG | + | chr1.1:78195727-78195746 | MS.gene76306:intron | 35.0% |
| ! | TGCCTTTAATCGGAGAATTT+TGG | + | chr1.1:78195964-78195983 | MS.gene76306:intron | 35.0% |
| ! | TTCTTGATATATGGGGTACT+AGG | - | chr1.1:78195878-78195897 | None:intergenic | 35.0% |
| !! | ATTTCTAAGTTGGTTGGAAG+AGG | - | chr1.1:78198076-78198095 | None:intergenic | 35.0% |
| !! | GTTCAAACGCAATATTTTGG+TGG | + | chr1.1:78196029-78196048 | MS.gene76306:intron | 35.0% |
| !! | TTTCTAAGTTGGTTGGAAGA+GGG | - | chr1.1:78198075-78198094 | None:intergenic | 35.0% |
| !! | TTTGTACAAGAGCACACTTT+TGG | - | chr1.1:78197318-78197337 | None:intergenic | 35.0% |
| !!! | TGTCATTTTAGTATAGTCGG+GGG | + | chr1.1:78196365-78196384 | MS.gene76306:intron | 35.0% |
| AAAAAGGGCAACCTATTAGC+GGG | - | chr1.1:78194959-78194978 | None:intergenic | 40.0% | |
| AAACAAAGCTTGTCCTTCCA+TGG | - | chr1.1:78196709-78196728 | None:intergenic | 40.0% | |
| AAACGTGTGATTAACCCATC+AGG | + | chr1.1:78195684-78195703 | MS.gene76306:CDS | 40.0% | |
| AAACTTAGAGGAATTGCAGG+AGG | + | chr1.1:78194600-78194619 | MS.gene76306:CDS | 40.0% | |
| AAAGAGTTCTTTGGCATGAC+TGG | + | chr1.1:78197737-78197756 | MS.gene76306:intron | 40.0% | |
| AAATGACTATGGCATGGAAG+TGG | + | chr1.1:78197103-78197122 | MS.gene76306:intron | 40.0% | |
| AACCAGCAGGTGAAAATGTT+CGG | + | chr1.1:78194391-78194410 | MS.gene76306:CDS | 40.0% | |
| AAGAATGCCCAAGCTCTATT+TGG | + | chr1.1:78198385-78198404 | MS.gene76306:intron | 40.0% | |
| AAGAGGGCTTAGATTTGAGA+GGG | + | chr1.1:78196332-78196351 | MS.gene76306:intron | 40.0% | |
| AAGAGTTCTTTGGCATGACT+GGG | + | chr1.1:78197738-78197757 | MS.gene76306:intron | 40.0% | |
| AAGTTTCTCCTTTGCTGATG+TGG | - | chr1.1:78199078-78199097 | None:intergenic | 40.0% | |
| AGAATGCCCAAGCTCTATTT+GGG | + | chr1.1:78198386-78198405 | MS.gene76306:intron | 40.0% | |
| AGAGGTCAAAAATCTCGATC+TGG | + | chr1.1:78194519-78194538 | MS.gene76306:CDS | 40.0% | |
| AGATGCTGGATTTCAAGAAG+GGG | + | chr1.1:78195632-78195651 | MS.gene76306:CDS | 40.0% | |
| AGCTTGAAGATGAAGTTGTG+GGG | + | chr1.1:78197502-78197521 | MS.gene76306:intron | 40.0% | |
| AGGATAAGGTGAAACTTGAG+AGG | + | chr1.1:78197883-78197902 | MS.gene76306:intron | 40.0% | |
| AGTAGCCAAGGTGATATCAA+AGG | + | chr1.1:78197422-78197441 | MS.gene76306:intron | 40.0% | |
| ATAAGTCATCTGTGTAGCCA+TGG | + | chr1.1:78196689-78196708 | MS.gene76306:intron | 40.0% | |
| ATACGAGATTCGTTGTTCGA+TGG | - | chr1.1:78197402-78197421 | None:intergenic | 40.0% | |
| ATATACTCCCAACTCCTTGA+TGG | - | chr1.1:78196515-78196534 | None:intergenic | 40.0% | |
| CAAAAAACCTTACCGGAAGA+TGG | + | chr1.1:78198135-78198154 | MS.gene76306:intron | 40.0% | |
| CACACTCAGGACTGAATATT+TGG | - | chr1.1:78198433-78198452 | None:intergenic | 40.0% | |
| CAGGTGAAAATGTTCGGTTT+CGG | + | chr1.1:78194397-78194416 | MS.gene76306:CDS | 40.0% | |
| CATTAGGTCTTCATGCATGT+AGG | - | chr1.1:78197375-78197394 | None:intergenic | 40.0% | |
| CCTGCAATTCCTCTAAGTTT+GGG | - | chr1.1:78194600-78194619 | None:intergenic | 40.0% | |
| CTCAAACTCCTTCAACTAAC+AGG | - | chr1.1:78197923-78197942 | None:intergenic | 40.0% | |
| CTGTGTTGGATCAACAAGTT+TGG | + | chr1.1:78196624-78196643 | MS.gene76306:intron | 40.0% | |
| CTTTGCCTTTGATATCACCT+TGG | - | chr1.1:78197430-78197449 | None:intergenic | 40.0% | |
| GAAAATAACATGCTCGGCAA+TGG | + | chr1.1:78198179-78198198 | MS.gene76306:intron | 40.0% | |
| GAACCAATGAAGAACAAAGC+TGG | + | chr1.1:78197253-78197272 | MS.gene76306:intron | 40.0% | |
| GAAGATGCTGGATTTCAAGA+AGG | + | chr1.1:78195630-78195649 | MS.gene76306:CDS | 40.0% | |
| GAGCTTGAAGATGAAGTTGT+GGG | + | chr1.1:78197501-78197520 | MS.gene76306:intron | 40.0% | |
| GATTATGCGGTTGAGAAACA+CGG | - | chr1.1:78196163-78196182 | None:intergenic | 40.0% | |
| GCTGTTGCTAAACATGAAGA+TGG | + | chr1.1:78197550-78197569 | MS.gene76306:intron | 40.0% | |
| GGAAAAGATGTCTTTATGGG+TGG | + | chr1.1:78197231-78197250 | MS.gene76306:intron | 40.0% | |
| GGAACGGAAACTTCTATTGA+AGG | + | chr1.1:78195710-78195729 | MS.gene76306:CDS | 40.0% | |
| GGTGAGGAAGTAATTTCAGT+TGG | + | chr1.1:78196590-78196609 | MS.gene76306:intron | 40.0% | |
| GTGTATGCATAAATCTCGCT+TGG | + | chr1.1:78195503-78195522 | MS.gene76306:intron | 40.0% | |
| GTTTCGGCAAAAAACCTTAC+CGG | + | chr1.1:78198128-78198147 | MS.gene76306:intron | 40.0% | |
| TAATAAGGCTGCTTCTGCTT+CGG | + | chr1.1:78194365-78194384 | MS.gene76306:CDS | 40.0% | |
| TCAAAACCTCTCATGATACC+AGG | - | chr1.1:78194546-78194565 | None:intergenic | 40.0% | |
| TCCATGATTCGTAACCCATT+TGG | + | chr1.1:78196794-78196813 | MS.gene76306:intron | 40.0% | |
| TCCTGCAATTCCTCTAAGTT+TGG | - | chr1.1:78194601-78194620 | None:intergenic | 40.0% | |
| TGAAAATGTTCGGTTTCGGT+TGG | + | chr1.1:78194401-78194420 | MS.gene76306:CDS | 40.0% | |
| TGAGAATTGTGAGTGATTCC+TGG | + | chr1.1:78195101-78195120 | MS.gene76306:intron | 40.0% | |
| TGAGCTTGAAGATGAAGTTG+TGG | + | chr1.1:78197500-78197519 | MS.gene76306:intron | 40.0% | |
| TGTCACATCACTGTTGAATG+CGG | + | chr1.1:78197286-78197305 | MS.gene76306:intron | 40.0% | |
| TGTGATTAACCCATCAGGAA+GGG | + | chr1.1:78195689-78195708 | MS.gene76306:CDS | 40.0% | |
| TTATGACACATCACCCAAGT+CGG | - | chr1.1:78196752-78196771 | None:intergenic | 40.0% | |
| TTGGAATATAAGAGGTCCGT+TGG | + | chr1.1:78196085-78196104 | MS.gene76306:intron | 40.0% | |
| TTGTTGGGTATGAAGCAAGA+GGG | + | chr1.1:78196821-78196840 | MS.gene76306:intron | 40.0% | |
| TTTGCTCTCTTTCTTGAACC+TGG | - | chr1.1:78194444-78194463 | None:intergenic | 40.0% | |
| TTTGTTGGGTATGAAGCAAG+AGG | + | chr1.1:78196820-78196839 | MS.gene76306:intron | 40.0% | |
| ! | ACAAAACGGACTCGATTATG+CGG | - | chr1.1:78196176-78196195 | None:intergenic | 40.0% |
| ! | AGGACTGAATATTTGGAGTG+AGG | - | chr1.1:78198426-78198445 | None:intergenic | 40.0% |
| ! | GCTTCCTATAAGCTTTGTGA+AGG | + | chr1.1:78198157-78198176 | MS.gene76306:intron | 40.0% |
| ! | TCTGGTTTCCTCATAAACTC+AGG | + | chr1.1:78198794-78198813 | MS.gene76306:intron | 40.0% |
| ! | TGTGGCGGGAATAAGAATAA+AGG | + | chr1.1:78196547-78196566 | MS.gene76306:intron | 40.0% |
| ! | TTTTTATTCTCCTCTGCCCT+AGG | - | chr1.1:78197140-78197159 | None:intergenic | 40.0% |
| !! | AATGGGTTACGAATCATGGA+TGG | - | chr1.1:78196794-78196813 | None:intergenic | 40.0% |
| !! | ACCAAATGGGTTACGAATCA+TGG | - | chr1.1:78196798-78196817 | None:intergenic | 40.0% |
| !! | ACCTTACAAACTGGTCTTGT+CGG | - | chr1.1:78198364-78198383 | None:intergenic | 40.0% |
| !! | CATATGAAATAGGTGTTGGG+AGG | + | chr1.1:78196657-78196676 | MS.gene76306:intron | 40.0% |
| !! | CTTCCAGCTTTGTTCTTCAT+TGG | - | chr1.1:78197259-78197278 | None:intergenic | 40.0% |
| !! | GGTATCATGAGAGGTTTTGA+AGG | + | chr1.1:78194546-78194565 | MS.gene76306:CDS | 40.0% |
| !! | GTTCTGGATCCAGGTTTTTA+GGG | - | chr1.1:78198277-78198296 | None:intergenic | 40.0% |
| !!! | AGTTGTGGTTTTGGAATGAG+AGG | + | chr1.1:78194501-78194520 | MS.gene76306:CDS | 40.0% |
| !!! | ATCATGAGAGGTTTTGAAGG+TGG | + | chr1.1:78194549-78194568 | MS.gene76306:CDS | 40.0% |
| !!! | GCAAGATTTTTGGCAACTGA+TGG | - | chr1.1:78199155-78199174 | None:intergenic | 40.0% |
| !!! | TAGGTTGCCCTTTTTTCACA+TGG | + | chr1.1:78194964-78194983 | MS.gene76306:intron | 40.0% |
| AAATACGCTGTTACCAGAGC+AGG | - | chr1.1:78198299-78198318 | None:intergenic | 45.0% | |
| AAGAAAAGAGTCGGTCGGTT+TGG | + | chr1.1:78197011-78197030 | MS.gene76306:intron | 45.0% | |
| AAGGAGAAACTTGAGTCTGC+TGG | + | chr1.1:78199086-78199105 | MS.gene76306:CDS | 45.0% | |
| AAGGCTTCCCAAATAGAGCT+TGG | - | chr1.1:78198396-78198415 | None:intergenic | 45.0% | |
| AATGCTCCAAAACCCGACTT+GGG | + | chr1.1:78196736-78196755 | MS.gene76306:intron | 45.0% | |
| ACCGACAAGACCAGTTTGTA+AGG | + | chr1.1:78198360-78198379 | MS.gene76306:intron | 45.0% | |
| ACCTGGTAACCTAACAGAAG+TGG | + | chr1.1:78197200-78197219 | MS.gene76306:intron | 45.0% | |
| ACTGGGAGTCAAACTGTCAA+AGG | + | chr1.1:78197755-78197774 | MS.gene76306:intron | 45.0% | |
| ACTTCTGTTAGGTTACCAGG+TGG | - | chr1.1:78197201-78197220 | None:intergenic | 45.0% | |
| AGAGCAAAGAGAAAGGGAAG+AGG | + | chr1.1:78194456-78194475 | MS.gene76306:CDS | 45.0% | |
| AGAGCAACACAGAGTTTGAG+AGG | + | chr1.1:78197699-78197718 | MS.gene76306:intron | 45.0% | |
| AGATTGAAGCTACCCTTGGA+CGG | + | chr1.1:78196943-78196962 | MS.gene76306:intron | 45.0% | |
| AGGCTTCCCAAATAGAGCTT+GGG | - | chr1.1:78198395-78198414 | None:intergenic | 45.0% | |
| AGTAAGCCTATTACAGGAGC+CGG | + | chr1.1:78195180-78195199 | MS.gene76306:intron | 45.0% | |
| ATACGCTACCAAGTGGGAAA+AGG | + | chr1.1:78198725-78198744 | MS.gene76306:intron | 45.0% | |
| ATCCATTGTGACGAAAAGCG+TGG | - | chr1.1:78198929-78198948 | None:intergenic | 45.0% | |
| ATTCAGTCCTGAGTGTGTGA+GGG | + | chr1.1:78198436-78198455 | MS.gene76306:intron | 45.0% | |
| ATTGCGCAAAAGCTCCCATT+TGG | - | chr1.1:78194850-78194869 | None:intergenic | 45.0% | |
| CAAAAATCTCGATCTGGACC+TGG | + | chr1.1:78194525-78194544 | MS.gene76306:CDS | 45.0% | |
| CATCAATGCATGAGCCTATG+CGG | - | chr1.1:78197605-78197624 | None:intergenic | 45.0% | |
| CCCAAACTTAGAGGAATTGC+AGG | + | chr1.1:78194597-78194616 | MS.gene76306:CDS | 45.0% | |
| CCTCCTGTATGGTTCAGTTT+CGG | + | chr1.1:78198112-78198131 | MS.gene76306:intron | 45.0% | |
| CGAATCTCGTATAGTAGCCA+AGG | + | chr1.1:78197410-78197429 | MS.gene76306:intron | 45.0% | |
| CGGTTTCGGTTGGACAATTT+GGG | + | chr1.1:78194411-78194430 | MS.gene76306:CDS | 45.0% | |
| CTATGTCTCCCAGATTGATG+TGG | - | chr1.1:78195611-78195630 | None:intergenic | 45.0% | |
| CTCCTTTGCTGATGTGGAAA+AGG | - | chr1.1:78199072-78199091 | None:intergenic | 45.0% | |
| CTCTTTCTTGAACCTGGTTG+TGG | - | chr1.1:78194438-78194457 | None:intergenic | 45.0% | |
| CTGGGAGTCAAACTGTCAAA+GGG | + | chr1.1:78197756-78197775 | MS.gene76306:intron | 45.0% | |
| CTTCTCTACTCCCTATACCA+AGG | - | chr1.1:78196392-78196411 | None:intergenic | 45.0% | |
| CTTGATCACTCCCTAACAGT+AGG | - | chr1.1:78195034-78195053 | None:intergenic | 45.0% | |
| GAAGAGGGCTTAGATTTGAG+AGG | + | chr1.1:78196331-78196350 | MS.gene76306:intron | 45.0% | |
| GAGTGAAGAAAAGAGTCGGT+CGG | + | chr1.1:78197006-78197025 | MS.gene76306:intron | 45.0% | |
| GATTCCTGGCCGTAAGAAAT+GGG | + | chr1.1:78199124-78199143 | MS.gene76306:CDS | 45.0% | |
| GCTTATAGGAAGCCATCTTC+CGG | - | chr1.1:78198150-78198169 | None:intergenic | 45.0% | |
| GGAGTGAAATGACTATGGCA+TGG | + | chr1.1:78197097-78197116 | MS.gene76306:intron | 45.0% | |
| GTCTTGCTGCAGCTAGAATA+AGG | - | chr1.1:78197833-78197852 | None:intergenic | 45.0% | |
| GTGTGATTAACCCATCAGGA+AGG | + | chr1.1:78195688-78195707 | MS.gene76306:CDS | 45.0% | |
| GTGTGCTCTTGTACAAAGGA+TGG | + | chr1.1:78197321-78197340 | MS.gene76306:intron | 45.0% | |
| GTTGGATCAACAAGTTTGGG+AGG | + | chr1.1:78196628-78196647 | MS.gene76306:intron | 45.0% | |
| TATGACACATCACCCAAGTC+GGG | - | chr1.1:78196751-78196770 | None:intergenic | 45.0% | |
| TATTCAGTCCTGAGTGTGTG+AGG | + | chr1.1:78198435-78198454 | MS.gene76306:intron | 45.0% | |
| TCCACTTCTGTTAGGTTACC+AGG | - | chr1.1:78197204-78197223 | None:intergenic | 45.0% | |
| TCGGTTTCGGTTGGACAATT+TGG | + | chr1.1:78194410-78194429 | MS.gene76306:CDS | 45.0% | |
| TGACAACTTCAACCTTTGGG+TGG | + | chr1.1:78197474-78197493 | MS.gene76306:intron | 45.0% | |
| TGATTCCTGGCCGTAAGAAA+TGG | + | chr1.1:78199123-78199142 | MS.gene76306:CDS | 45.0% | |
| TGGATTTCAAGAAGGGGAAG+AGG | + | chr1.1:78195638-78195657 | MS.gene76306:CDS | 45.0% | |
| TGTTCCATCACTGTGATTCC+TGG | + | chr1.1:78199110-78199129 | MS.gene76306:CDS | 45.0% | |
| TTAACCCATCAGGAAGGGAA+CGG | + | chr1.1:78195694-78195713 | MS.gene76306:CDS | 45.0% | |
| TTAACCCATTTCTTACGGCC+AGG | - | chr1.1:78199131-78199150 | None:intergenic | 45.0% | |
| TTGCCGAAACTGAACCATAC+AGG | - | chr1.1:78198118-78198137 | None:intergenic | 45.0% | |
| TTGGGCAATCGTCGATAAAG+TGG | - | chr1.1:78194582-78194601 | None:intergenic | 45.0% | |
| TTGGTATCAAGGCTCCATCA+AGG | + | chr1.1:78196498-78196517 | MS.gene76306:intron | 45.0% | |
| ! | AAAGGCACACATGGATGTCA+TGG | + | chr1.1:78196565-78196584 | MS.gene76306:intron | 45.0% |
| ! | AACCGAACATTTTCACCTGC+TGG | - | chr1.1:78194396-78194415 | None:intergenic | 45.0% |
| ! | CTTCTTGGCGAAGTATTCGT+CGG | - | chr1.1:78199183-78199202 | None:intergenic | 45.0% |
| ! | GCATGGAAGTGGAAGTTGAT+CGG | + | chr1.1:78197114-78197133 | MS.gene76306:intron | 45.0% |
| ! | TAGCTGCAGCAAGACTGTTT+TGG | + | chr1.1:78197838-78197857 | MS.gene76306:intron | 45.0% |
| ! | TAGGCTCATGCATTGATGAG+AGG | + | chr1.1:78197607-78197626 | MS.gene76306:intron | 45.0% |
| ! | TGCCTTTTCCACATCAGCAA+AGG | + | chr1.1:78199067-78199086 | MS.gene76306:CDS | 45.0% |
| ! | TTCCACGCTTTTCGTCACAA+TGG | + | chr1.1:78198924-78198943 | MS.gene76306:intron | 45.0% |
| ! | TTTGGAGTGAGGACAAACGA+AGG | - | chr1.1:78198415-78198434 | None:intergenic | 45.0% |
| !! | GTACAAGAGCACACTTTTGG+TGG | - | chr1.1:78197315-78197334 | None:intergenic | 45.0% |
| !! | GTTGTTCGATGGTGGACATT+AGG | - | chr1.1:78197391-78197410 | None:intergenic | 45.0% |
| !! | GTTTGTTGTGCTCTGGTTTC+AGG | + | chr1.1:78198998-78199017 | MS.gene76306:intron | 45.0% |
| !!! | GGTTCTGGATCCAGGTTTTT+AGG | - | chr1.1:78198278-78198297 | None:intergenic | 45.0% |
| !!! | GTGCTCTGGTTTCAGGTTTT+GGG | + | chr1.1:78199005-78199024 | MS.gene76306:intron | 45.0% |
| !!! | TGGATCCAGGTTTTTAGGGT+TGG | - | chr1.1:78198273-78198292 | None:intergenic | 45.0% |
| !!! | TGGTTTCAGGTTTTGGGTGA+AGG | + | chr1.1:78199011-78199030 | MS.gene76306:intron | 45.0% |
| !!! | TGTGCTCTGGTTTCAGGTTT+TGG | + | chr1.1:78199004-78199023 | MS.gene76306:intron | 45.0% |
| !! | TTATAAAAAAAAACATAATA+AGG | + | chr1.1:78195558-78195577 | MS.gene76306:intron | 5.0% |
| !!! | TTTTATAAAAATAAAAGAAA+AGG | - | chr1.1:78195546-78195565 | None:intergenic | 5.0% |
| AGGGCTTGTGCATGAATGCA+AGG | + | chr1.1:78196840-78196859 | MS.gene76306:intron | 50.0% | |
| AGTTTCCGTTCCCTTCCTGA+TGG | - | chr1.1:78195702-78195721 | None:intergenic | 50.0% | |
| ATTACCGAACAGGGGACAGT+AGG | + | chr1.1:78197162-78197181 | MS.gene76306:intron | 50.0% | |
| CAACACAGAGTTTGAGAGGC+GGG | + | chr1.1:78197703-78197722 | MS.gene76306:intron | 50.0% | |
| CAAGGCTCCATCAAGGAGTT+GGG | + | chr1.1:78196505-78196524 | MS.gene76306:intron | 50.0% | |
| CAATCCTACTGTCCCCTGTT+CGG | - | chr1.1:78197169-78197188 | None:intergenic | 50.0% | |
| CAATGCTCCAAAACCCGACT+TGG | + | chr1.1:78196735-78196754 | MS.gene76306:intron | 50.0% | |
| CACATCACTGTTGAATGCGG+AGG | + | chr1.1:78197289-78197308 | MS.gene76306:intron | 50.0% | |
| CATGGATGTCATGGATGGTG+AGG | + | chr1.1:78196574-78196593 | MS.gene76306:intron | 50.0% | |
| CCGAAACTGAACCATACAGG+AGG | - | chr1.1:78198115-78198134 | None:intergenic | 50.0% | |
| CGACGATTGCCCAAACTTAG+AGG | + | chr1.1:78194588-78194607 | MS.gene76306:CDS | 50.0% | |
| CGAGATTCGTTGTTCGATGG+TGG | - | chr1.1:78197399-78197418 | None:intergenic | 50.0% | |
| CTACCAAGTGGGAAAAGGCA+TGG | + | chr1.1:78198730-78198749 | MS.gene76306:intron | 50.0% | |
| CTGGGAGACATAGAAGATGC+TGG | + | chr1.1:78195618-78195637 | MS.gene76306:CDS | 50.0% | |
| GACAATTTGGGTCCACAACC+AGG | + | chr1.1:78194423-78194442 | MS.gene76306:CDS | 50.0% | |
| GATTGAAGCTACCCTTGGAC+GGG | + | chr1.1:78196944-78196963 | MS.gene76306:intron | 50.0% | |
| GCAACACAGAGTTTGAGAGG+CGG | + | chr1.1:78197702-78197721 | MS.gene76306:intron | 50.0% | |
| GCACACATGGATGTCATGGA+TGG | + | chr1.1:78196569-78196588 | MS.gene76306:intron | 50.0% | |
| GCAGGCGTCAAAGAGTTCTT+TGG | + | chr1.1:78197728-78197747 | MS.gene76306:intron | 50.0% | |
| GCATATCCGGCTCCTGTAAT+AGG | - | chr1.1:78195189-78195208 | None:intergenic | 50.0% | |
| GGCAAGATTGAAGCTACCCT+TGG | + | chr1.1:78196939-78196958 | MS.gene76306:intron | 50.0% | |
| GGCCAACTGAAGACTCATCA+GGG | - | chr1.1:78198054-78198073 | None:intergenic | 50.0% | |
| GGTTACGAATCATGGATGGC+TGG | - | chr1.1:78196790-78196809 | None:intergenic | 50.0% | |
| GTCATCTGTGTAGCCATGGA+AGG | + | chr1.1:78196693-78196712 | MS.gene76306:intron | 50.0% | |
| GTTTCCGTTCCCTTCCTGAT+GGG | - | chr1.1:78195701-78195720 | None:intergenic | 50.0% | |
| TAGGAAGCCATCTTCCGGTA+AGG | - | chr1.1:78198145-78198164 | None:intergenic | 50.0% | |
| TCAAGCTCAATGCCACCCAA+AGG | - | chr1.1:78197489-78197508 | None:intergenic | 50.0% | |
| TCAAGGCTCCATCAAGGAGT+TGG | + | chr1.1:78196504-78196523 | MS.gene76306:intron | 50.0% | |
| TCCAATAGTGACCCGTCCAA+GGG | - | chr1.1:78196958-78196977 | None:intergenic | 50.0% | |
| TCTGGACCTGGTATCATGAG+AGG | + | chr1.1:78194537-78194556 | MS.gene76306:CDS | 50.0% | |
| TGCTCTTTGAGCCTCCTGTA+TGG | + | chr1.1:78198101-78198120 | MS.gene76306:intron | 50.0% | |
| TGGGGAAGATGCATCTGTGT+TGG | + | chr1.1:78196610-78196629 | MS.gene76306:intron | 50.0% | |
| TTAGTATAGTCGGGGGTCCT+TGG | + | chr1.1:78196372-78196391 | MS.gene76306:intron | 50.0% | |
| TTCAAAGAGGCTGACCGCAT+AGG | + | chr1.1:78197588-78197607 | MS.gene76306:intron | 50.0% | |
| TTCAGTCCTGAGTGTGTGAG+GGG | + | chr1.1:78198437-78198456 | MS.gene76306:intron | 50.0% | |
| ! | AAGTGGAAGTTGATCGGCCT+AGG | + | chr1.1:78197120-78197139 | MS.gene76306:intron | 50.0% |
| ! | ACATCACCCAAGTCGGGTTT+TGG | - | chr1.1:78196745-78196764 | None:intergenic | 50.0% |
| ! | AGTGGAAGTTGATCGGCCTA+GGG | + | chr1.1:78197121-78197140 | MS.gene76306:intron | 50.0% |
| ! | CAAGGAGCGAGTTGTGGTTT+TGG | + | chr1.1:78194492-78194511 | MS.gene76306:CDS | 50.0% |
| ! | GCTTGTAGTTTGTGGGAGCT+AGG | + | chr1.1:78197947-78197966 | MS.gene76306:intron | 50.0% |
| ! | GTCGGCACGTGCAAGATTTT+TGG | - | chr1.1:78199165-78199184 | None:intergenic | 50.0% |
| !! | CTGGTCTTGTCGGTTCAGTT+AGG | - | chr1.1:78198354-78198373 | None:intergenic | 50.0% |
| !! | TCTAGGGTTAGCCTTGACGA+CGG | + | chr1.1:78198247-78198266 | MS.gene76306:intron | 50.0% |
| ACAACTCGCTCCTTGTCCTG+CGG | - | chr1.1:78194487-78194506 | None:intergenic | 55.0% | |
| ACCCTTGGACGGGTCACTAT+TGG | + | chr1.1:78196954-78196973 | MS.gene76306:intron | 55.0% | |
| ACGGCCAGGAATCACAGTGA+TGG | - | chr1.1:78199117-78199136 | None:intergenic | 55.0% | |
| AGCAGCTGCTTCTCGCTTCT+TGG | - | chr1.1:78199198-78199217 | None:intergenic | 55.0% | |
| AGTCGGGGGTCCTTGGTATA+GGG | + | chr1.1:78196379-78196398 | MS.gene76306:intron | 55.0% | |
| CAGGGGACAGTAGGATTGCA+AGG | + | chr1.1:78197171-78197190 | MS.gene76306:intron | 55.0% | |
| CTCCAATAGTGACCCGTCCA+AGG | - | chr1.1:78196959-78196978 | None:intergenic | 55.0% | |
| CTTGGACGGGTCACTATTGG+AGG | + | chr1.1:78196957-78196976 | MS.gene76306:intron | 55.0% | |
| GACGGCCAACCCTAAAAACC+TGG | + | chr1.1:78198265-78198284 | MS.gene76306:intron | 55.0% | |
| GCTGTTACCAGAGCAGGTTC+TGG | - | chr1.1:78198293-78198312 | None:intergenic | 55.0% | |
| GGATTGCAAGGTCAACCACC+TGG | + | chr1.1:78197183-78197202 | MS.gene76306:intron | 55.0% | |
| GGCCCTGATGAGTCTTCAGT+TGG | + | chr1.1:78198049-78198068 | MS.gene76306:intron | 55.0% | |
| GGGCCAACTGAAGACTCATC+AGG | - | chr1.1:78198055-78198074 | None:intergenic | 55.0% | |
| TAGTCGGGGGTCCTTGGTAT+AGG | + | chr1.1:78196378-78196397 | MS.gene76306:intron | 55.0% | |
| TCTGCTTCGGTGAAACCAGC+AGG | + | chr1.1:78194378-78194397 | MS.gene76306:CDS | 55.0% | |
| ! | AGTGGGAAAAGGCATGGTGG+TGG | + | chr1.1:78198736-78198755 | MS.gene76306:intron | 55.0% |
| ! | CCAAGTGGGAAAAGGCATGG+TGG | + | chr1.1:78198733-78198752 | MS.gene76306:intron | 55.0% |
| ! | CCACCATGCCTTTTCCCACT+TGG | - | chr1.1:78198736-78198755 | None:intergenic | 55.0% |
| ! | GGTGTCTCTGGAGACACTGA+CGG | + | chr1.1:78195659-78195678 | MS.gene76306:CDS | 55.0% |
| !! | AAGGGAAGAGGTATTGCCGC+AGG | + | chr1.1:78194468-78194487 | MS.gene76306:CDS | 55.0% |
| !! | AGAAGGGGAAGAGGTGTCTC+TGG | + | chr1.1:78195647-78195666 | MS.gene76306:CDS | 55.0% |
| !! | AGAGGTATTGCCGCAGGACA+AGG | + | chr1.1:78194474-78194493 | MS.gene76306:CDS | 55.0% |
| !! | TTTAGGGTTGGCCGTCGTCA+AGG | - | chr1.1:78198261-78198280 | None:intergenic | 55.0% |
| ACACCTCCCCTCACACACTC+AGG | - | chr1.1:78198446-78198465 | None:intergenic | 60.0% | |
| AGTCCTGAGTGTGTGAGGGG+AGG | + | chr1.1:78198440-78198459 | MS.gene76306:intron | 60.0% | |
| AGTTGATCGGCCTAGGGCAG+AGG | + | chr1.1:78197127-78197146 | MS.gene76306:intron | 60.0% | |
| CATGCTCGGCAATGGCAGTG+CGG | + | chr1.1:78198187-78198206 | MS.gene76306:intron | 60.0% | |
| CCTGGATCCAGAACCTGCTC+TGG | + | chr1.1:78198283-78198302 | MS.gene76306:intron | 60.0% | |
| GAGTTTGAGAGGCGGGATGC+AGG | + | chr1.1:78197710-78197729 | MS.gene76306:intron | 60.0% | |
| GCAGGACAAGGAGCGAGTTG+TGG | + | chr1.1:78194486-78194505 | MS.gene76306:CDS | 60.0% | |
| !! | CCAGAGCAGGTTCTGGATCC+AGG | - | chr1.1:78198286-78198305 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 78194342 | 78199238 | 78194342 | ID=MS.gene76306 |
| chr1.1 | mRNA | 78194342 | 78199238 | 78194342 | ID=MS.gene76306.t1;Parent=MS.gene76306 |
| chr1.1 | exon | 78194342 | 78194621 | 78194342 | ID=MS.gene76306.t1.exon1;Parent=MS.gene76306.t1 |
| chr1.1 | CDS | 78194342 | 78194621 | 78194342 | ID=cds.MS.gene76306.t1;Parent=MS.gene76306.t1 |
| chr1.1 | exon | 78195580 | 78195731 | 78195580 | ID=MS.gene76306.t1.exon2;Parent=MS.gene76306.t1 |
| chr1.1 | CDS | 78195580 | 78195731 | 78195580 | ID=cds.MS.gene76306.t1;Parent=MS.gene76306.t1 |
| chr1.1 | exon | 78199020 | 78199238 | 78199020 | ID=MS.gene76306.t1.exon3;Parent=MS.gene76306.t1 |
| chr1.1 | CDS | 78199020 | 78199238 | 78199020 | ID=cds.MS.gene76306.t1;Parent=MS.gene76306.t1 |
| Gene Sequence |
| Protein sequence |
