Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85727.t1 | XP_013451828.1 | 99.1 | 339 | 3 | 0 | 1 | 339 | 1 | 339 | 6.40E-197 | 696.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85727.t1 | P46276 | 87.5 | 337 | 42 | 0 | 1 | 337 | 1 | 337 | 1.2e-178 | 627.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85727.t1 | G8A0S6 | 99.1 | 339 | 3 | 0 | 1 | 339 | 1 | 339 | 4.6e-197 | 696.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene85727.t1 | TF | C3H |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049260 | MS.gene85727 | 0.83128 | 1.83E-55 | -1.69E-46 |
| MS.gene049346 | MS.gene85727 | 0.800859 | 1.18E-48 | -1.69E-46 |
| MS.gene049351 | MS.gene85727 | 0.819582 | 1.08E-52 | -1.69E-46 |
| MS.gene049356 | MS.gene85727 | 0.832231 | 1.06E-55 | -1.69E-46 |
| MS.gene049389 | MS.gene85727 | 0.85053 | 1.60E-60 | -1.69E-46 |
| MS.gene049491 | MS.gene85727 | 0.840277 | 9.58E-58 | -1.69E-46 |
| MS.gene049661 | MS.gene85727 | 0.810291 | 1.24E-50 | -1.69E-46 |
| MS.gene049662 | MS.gene85727 | 0.806711 | 7.20E-50 | -1.69E-46 |
| MS.gene049758 | MS.gene85727 | 0.880253 | 6.39E-70 | -1.69E-46 |
| MS.gene049910 | MS.gene85727 | 0.835273 | 1.85E-56 | -1.69E-46 |
| MS.gene050076 | MS.gene85727 | 0.84184 | 3.72E-58 | -1.69E-46 |
| MS.gene050099 | MS.gene85727 | 0.804839 | 1.78E-49 | -1.69E-46 |
| MS.gene050128 | MS.gene85727 | 0.852452 | 4.57E-61 | -1.69E-46 |
| MS.gene050301 | MS.gene85727 | 0.895988 | 5.68E-76 | -1.69E-46 |
| MS.gene050397 | MS.gene85727 | 0.817683 | 2.90E-52 | -1.69E-46 |
| MS.gene050432 | MS.gene85727 | 0.835511 | 1.61E-56 | -1.69E-46 |
| MS.gene050464 | MS.gene85727 | 0.821287 | 4.38E-53 | -1.69E-46 |
| MS.gene050529 | MS.gene85727 | 0.823662 | 1.23E-53 | -1.69E-46 |
| MS.gene05053 | MS.gene85727 | 0.823609 | 1.26E-53 | -1.69E-46 |
| MS.gene050670 | MS.gene85727 | 0.830394 | 3.01E-55 | -1.69E-46 |
| MS.gene050767 | MS.gene85727 | 0.810463 | 1.14E-50 | -1.69E-46 |
| MS.gene050770 | MS.gene85727 | 0.81416 | 1.77E-51 | -1.69E-46 |
| MS.gene05101 | MS.gene85727 | 0.845932 | 2.98E-59 | -1.69E-46 |
| MS.gene05105 | MS.gene85727 | 0.816826 | 4.53E-52 | -1.69E-46 |
| MS.gene05119 | MS.gene85727 | -0.807445 | 5.04E-50 | -1.69E-46 |
| MS.gene051360 | MS.gene85727 | 0.816139 | 6.45E-52 | -1.69E-46 |
| MS.gene051471 | MS.gene85727 | 0.848392 | 6.31E-60 | -1.69E-46 |
| MS.gene051582 | MS.gene85727 | 0.811172 | 8.00E-51 | -1.69E-46 |
| MS.gene051860 | MS.gene85727 | 0.829389 | 5.29E-55 | -1.69E-46 |
| MS.gene051983 | MS.gene85727 | 0.802845 | 4.62E-49 | -1.69E-46 |
| MS.gene052077 | MS.gene85727 | 0.822469 | 2.33E-53 | -1.69E-46 |
| MS.gene052078 | MS.gene85727 | 0.865676 | 4.97E-65 | -1.69E-46 |
| MS.gene052178 | MS.gene85727 | 0.857447 | 1.62E-62 | -1.69E-46 |
| MS.gene052188 | MS.gene85727 | 0.871776 | 5.28E-67 | -1.69E-46 |
| MS.gene052207 | MS.gene85727 | 0.826754 | 2.28E-54 | -1.69E-46 |
| MS.gene052253 | MS.gene85727 | 0.824726 | 6.90E-54 | -1.69E-46 |
| MS.gene052290 | MS.gene85727 | 0.813305 | 2.74E-51 | -1.69E-46 |
| MS.gene052310 | MS.gene85727 | 0.85832 | 8.93E-63 | -1.69E-46 |
| MS.gene052322 | MS.gene85727 | 0.814895 | 1.22E-51 | -1.69E-46 |
| MS.gene052326 | MS.gene85727 | 0.824876 | 6.37E-54 | -1.69E-46 |
| MS.gene052340 | MS.gene85727 | 0.878297 | 3.15E-69 | -1.69E-46 |
| MS.gene052484 | MS.gene85727 | 0.804306 | 2.30E-49 | -1.69E-46 |
| MS.gene052485 | MS.gene85727 | 0.833838 | 4.24E-56 | -1.69E-46 |
| MS.gene053073 | MS.gene85727 | 0.846831 | 1.70E-59 | -1.69E-46 |
| MS.gene053103 | MS.gene85727 | 0.865353 | 6.28E-65 | -1.69E-46 |
| MS.gene05316 | MS.gene85727 | 0.827848 | 1.25E-54 | -1.69E-46 |
| MS.gene053209 | MS.gene85727 | 0.888801 | 4.28E-73 | -1.69E-46 |
| MS.gene053322 | MS.gene85727 | 0.801546 | 8.56E-49 | -1.69E-46 |
| MS.gene053557 | MS.gene85727 | 0.851557 | 8.21E-61 | -1.69E-46 |
| MS.gene053559 | MS.gene85727 | 0.803669 | 3.12E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene85727 | 0.878984 | 1.80E-69 | -1.69E-46 |
| MS.gene053928 | MS.gene85727 | 0.824535 | 7.66E-54 | -1.69E-46 |
| MS.gene054011 | MS.gene85727 | 0.800867 | 1.18E-48 | -1.69E-46 |
| MS.gene054123 | MS.gene85727 | 0.850889 | 1.27E-60 | -1.69E-46 |
| MS.gene054376 | MS.gene85727 | 0.819626 | 1.05E-52 | -1.69E-46 |
| MS.gene054473 | MS.gene85727 | 0.83608 | 1.15E-56 | -1.69E-46 |
| MS.gene05455 | MS.gene85727 | 0.815044 | 1.13E-51 | -1.69E-46 |
| MS.gene054930 | MS.gene85727 | 0.836602 | 8.50E-57 | -1.69E-46 |
| MS.gene055116 | MS.gene85727 | 0.846689 | 1.85E-59 | -1.69E-46 |
| MS.gene055254 | MS.gene85727 | 0.819463 | 1.15E-52 | -1.69E-46 |
| MS.gene055277 | MS.gene85727 | 0.856466 | 3.16E-62 | -1.69E-46 |
| MS.gene055390 | MS.gene85727 | 0.835441 | 1.67E-56 | -1.69E-46 |
| MS.gene055412 | MS.gene85727 | 0.819574 | 1.08E-52 | -1.69E-46 |
| MS.gene055422 | MS.gene85727 | 0.890118 | 1.31E-73 | -1.69E-46 |
| MS.gene055428 | MS.gene85727 | 0.867695 | 1.13E-65 | -1.69E-46 |
| MS.gene05553 | MS.gene85727 | 0.820095 | 8.22E-53 | -1.69E-46 |
| MS.gene055604 | MS.gene85727 | 0.822486 | 2.31E-53 | -1.69E-46 |
| MS.gene055666 | MS.gene85727 | 0.800609 | 1.33E-48 | -1.69E-46 |
| MS.gene055712 | MS.gene85727 | 0.837394 | 5.33E-57 | -1.69E-46 |
| MS.gene055859 | MS.gene85727 | 0.802662 | 5.04E-49 | -1.69E-46 |
| MS.gene056191 | MS.gene85727 | 0.812878 | 3.40E-51 | -1.69E-46 |
| MS.gene056314 | MS.gene85727 | 0.829013 | 6.53E-55 | -1.69E-46 |
| MS.gene056407 | MS.gene85727 | 0.855583 | 5.72E-62 | -1.69E-46 |
| MS.gene056410 | MS.gene85727 | 0.828633 | 8.07E-55 | -1.69E-46 |
| MS.gene056609 | MS.gene85727 | 0.833433 | 5.35E-56 | -1.69E-46 |
| MS.gene056612 | MS.gene85727 | 0.839282 | 1.74E-57 | -1.69E-46 |
| MS.gene056659 | MS.gene85727 | 0.827704 | 1.35E-54 | -1.69E-46 |
| MS.gene056719 | MS.gene85727 | 0.82839 | 9.24E-55 | -1.69E-46 |
| MS.gene056979 | MS.gene85727 | 0.808453 | 3.07E-50 | -1.69E-46 |
| MS.gene05702 | MS.gene85727 | 0.864663 | 1.03E-64 | -1.69E-46 |
| MS.gene057121 | MS.gene85727 | 0.800514 | 1.39E-48 | -1.69E-46 |
| MS.gene057123 | MS.gene85727 | 0.81257 | 3.97E-51 | -1.69E-46 |
| MS.gene057245 | MS.gene85727 | 0.814656 | 1.38E-51 | -1.69E-46 |
| MS.gene057295 | MS.gene85727 | 0.8159 | 7.30E-52 | -1.69E-46 |
| MS.gene05733 | MS.gene85727 | 0.832383 | 9.76E-56 | -1.69E-46 |
| MS.gene05735 | MS.gene85727 | 0.800856 | 1.18E-48 | -1.69E-46 |
| MS.gene057439 | MS.gene85727 | 0.835987 | 1.22E-56 | -1.69E-46 |
| MS.gene057448 | MS.gene85727 | 0.84717 | 1.37E-59 | -1.69E-46 |
| MS.gene057449 | MS.gene85727 | 0.827643 | 1.40E-54 | -1.69E-46 |
| MS.gene057450 | MS.gene85727 | 0.859961 | 2.88E-63 | -1.69E-46 |
| MS.gene057469 | MS.gene85727 | 0.820345 | 7.21E-53 | -1.69E-46 |
| MS.gene057749 | MS.gene85727 | 0.814643 | 1.39E-51 | -1.69E-46 |
| MS.gene057796 | MS.gene85727 | 0.815887 | 7.34E-52 | -1.69E-46 |
| MS.gene057823 | MS.gene85727 | 0.819779 | 9.71E-53 | -1.69E-46 |
| MS.gene058002 | MS.gene85727 | 0.850276 | 1.89E-60 | -1.69E-46 |
| MS.gene058082 | MS.gene85727 | 0.845765 | 3.31E-59 | -1.69E-46 |
| MS.gene05811 | MS.gene85727 | 0.863222 | 2.90E-64 | -1.69E-46 |
| MS.gene058142 | MS.gene85727 | 0.819114 | 1.38E-52 | -1.69E-46 |
| MS.gene058276 | MS.gene85727 | 0.809771 | 1.60E-50 | -1.69E-46 |
| MS.gene058293 | MS.gene85727 | 0.863513 | 2.36E-64 | -1.69E-46 |
| MS.gene058365 | MS.gene85727 | 0.819704 | 1.01E-52 | -1.69E-46 |
| MS.gene058660 | MS.gene85727 | 0.847645 | 1.01E-59 | -1.69E-46 |
| MS.gene058700 | MS.gene85727 | 0.803295 | 3.73E-49 | -1.69E-46 |
| MS.gene058787 | MS.gene85727 | 0.823965 | 1.04E-53 | -1.69E-46 |
| MS.gene058845 | MS.gene85727 | 0.816757 | 4.69E-52 | -1.69E-46 |
| MS.gene05886 | MS.gene85727 | 0.831616 | 1.51E-55 | -1.69E-46 |
| MS.gene058928 | MS.gene85727 | 0.826514 | 2.60E-54 | -1.69E-46 |
| MS.gene05907 | MS.gene85727 | 0.863437 | 2.49E-64 | -1.69E-46 |
| MS.gene059285 | MS.gene85727 | 0.828582 | 8.30E-55 | -1.69E-46 |
| MS.gene059326 | MS.gene85727 | 0.815216 | 1.04E-51 | -1.69E-46 |
| MS.gene059342 | MS.gene85727 | 0.812162 | 4.87E-51 | -1.69E-46 |
| MS.gene059366 | MS.gene85727 | 0.830265 | 3.24E-55 | -1.69E-46 |
| MS.gene059518 | MS.gene85727 | 0.861463 | 1.01E-63 | -1.69E-46 |
| MS.gene059597 | MS.gene85727 | 0.897436 | 1.41E-76 | -1.69E-46 |
| MS.gene05959 | MS.gene85727 | 0.83343 | 5.36E-56 | -1.69E-46 |
| MS.gene059676 | MS.gene85727 | 0.868511 | 6.18E-66 | -1.69E-46 |
| MS.gene059688 | MS.gene85727 | 0.877716 | 5.03E-69 | -1.69E-46 |
| MS.gene059692 | MS.gene85727 | 0.898026 | 7.94E-77 | -1.69E-46 |
| MS.gene059695 | MS.gene85727 | 0.892154 | 2.06E-74 | -1.69E-46 |
| MS.gene059708 | MS.gene85727 | 0.804329 | 2.28E-49 | -1.69E-46 |
| MS.gene059711 | MS.gene85727 | 0.846084 | 2.71E-59 | -1.69E-46 |
| MS.gene05984 | MS.gene85727 | 0.861343 | 1.10E-63 | -1.69E-46 |
| MS.gene059894 | MS.gene85727 | 0.896207 | 4.60E-76 | -1.69E-46 |
| MS.gene059899 | MS.gene85727 | 0.815061 | 1.12E-51 | -1.69E-46 |
| MS.gene059974 | MS.gene85727 | 0.846332 | 2.32E-59 | -1.69E-46 |
| MS.gene060005 | MS.gene85727 | 0.814783 | 1.29E-51 | -1.69E-46 |
| MS.gene06037 | MS.gene85727 | 0.86044 | 2.06E-63 | -1.69E-46 |
| MS.gene060403 | MS.gene85727 | 0.816746 | 4.72E-52 | -1.69E-46 |
| MS.gene060407 | MS.gene85727 | 0.817457 | 3.26E-52 | -1.69E-46 |
| MS.gene060495 | MS.gene85727 | 0.833521 | 5.08E-56 | -1.69E-46 |
| MS.gene060496 | MS.gene85727 | 0.808271 | 3.36E-50 | -1.69E-46 |
| MS.gene060559 | MS.gene85727 | 0.802308 | 5.97E-49 | -1.69E-46 |
| MS.gene060818 | MS.gene85727 | 0.806415 | 8.32E-50 | -1.69E-46 |
| MS.gene060837 | MS.gene85727 | 0.810446 | 1.15E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene85727 | 0.887836 | 1.01E-72 | -1.69E-46 |
| MS.gene061051 | MS.gene85727 | -0.850729 | 1.41E-60 | -1.69E-46 |
| MS.gene061112 | MS.gene85727 | 0.804183 | 2.44E-49 | -1.69E-46 |
| MS.gene061159 | MS.gene85727 | 0.822065 | 2.89E-53 | -1.69E-46 |
| MS.gene061265 | MS.gene85727 | 0.802742 | 4.86E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene85727 | MS.gene053579 | PPI |
| MS.gene85727 | MS.gene90221 | PPI |
| MS.gene068024 | MS.gene85727 | PPI |
| MS.gene028481 | MS.gene85727 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85727.t1 | MTR_6g035305 | 99.115 | 339 | 3 | 0 | 1 | 339 | 1 | 339 | 0.0 | 697 |
| MS.gene85727.t1 | MTR_2g008030 | 84.179 | 335 | 53 | 0 | 1 | 335 | 1 | 335 | 0.0 | 597 |
| MS.gene85727.t1 | MTR_7g066120 | 50.000 | 342 | 153 | 2 | 11 | 335 | 71 | 411 | 7.80e-114 | 336 |
| MS.gene85727.t1 | MTR_0776s0010 | 41.337 | 329 | 185 | 5 | 7 | 328 | 284 | 611 | 1.02e-83 | 276 |
| MS.gene85727.t1 | MTR_4g093620 | 40.836 | 311 | 161 | 6 | 32 | 332 | 87 | 384 | 6.71e-73 | 231 |
| MS.gene85727.t1 | MTR_3g070100 | 28.253 | 269 | 165 | 8 | 67 | 327 | 116 | 364 | 7.58e-19 | 87.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85727.t1 | AT1G43670 | 85.251 | 339 | 50 | 0 | 1 | 339 | 1 | 339 | 0.0 | 614 |
| MS.gene85727.t1 | AT3G54050 | 50.000 | 342 | 151 | 3 | 11 | 335 | 79 | 417 | 3.06e-114 | 338 |
| MS.gene85727.t1 | AT3G54050 | 50.000 | 342 | 151 | 3 | 11 | 335 | 79 | 417 | 3.06e-114 | 338 |
| MS.gene85727.t1 | AT5G64380 | 41.158 | 311 | 164 | 7 | 32 | 332 | 89 | 390 | 3.91e-74 | 234 |
| MS.gene85727.t1 | AT3G55800 | 29.304 | 273 | 157 | 8 | 67 | 327 | 123 | 371 | 1.30e-19 | 89.4 |
Find 80 sgRNAs with CRISPR-Local
Find 337 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATAAATCTTGCCTTTCTT+TGG | 0.224320 | 6.1:-16608693 | None:intergenic |
| ATCATAGCTACCAAGAAATA+TGG | 0.228525 | 6.1:-16610779 | None:intergenic |
| TTGCTTAATAACATTGTTCT+TGG | 0.232374 | 6.1:+16604796 | MS.gene85727:CDS |
| ACCACTGGAAGTGGTGTTAA+TGG | 0.234751 | 6.1:+16607893 | MS.gene85727:CDS |
| GCAAAGTCTCTTAGATATAT+TGG | 0.276844 | 6.1:+16608889 | MS.gene85727:CDS |
| CCTAACTCACCCTGACATTA+AGG | 0.279021 | 6.1:+16607949 | MS.gene85727:CDS |
| GAAAGATCTCCCATATTTCT+TGG | 0.282491 | 6.1:+16610769 | MS.gene85727:CDS |
| GCAAAGCTCATTGGACTTGC+AGG | 0.289654 | 6.1:+16606148 | MS.gene85727:CDS |
| CTTCCCAATGTCCTTCTTGA+TGG | 0.290934 | 6.1:+16610023 | MS.gene85727:CDS |
| GTGAAATCTCCACGTGATTC+AGG | 0.296233 | 6.1:-16604769 | None:intergenic |
| ATGCATTACCCTTTCCTTGC+CGG | 0.313636 | 6.1:-16610070 | None:intergenic |
| AATAAATCTTGCCTTTCTTT+GGG | 0.337209 | 6.1:-16608692 | None:intergenic |
| ATTCAACACAAAACGTGTTA+TGG | 0.348871 | 6.1:-16604731 | None:intergenic |
| CCTTAATGTCAGGGTGAGTT+AGG | 0.353076 | 6.1:-16607949 | None:intergenic |
| GTTCATCGTACATTGCTATA+TGG | 0.377460 | 6.1:+16609834 | MS.gene85727:CDS |
| TTCACTCTCGACCCTTCTCT+TGG | 0.387036 | 6.1:+16607917 | MS.gene85727:CDS |
| GGTAGGACCATCCCAGTTCT+TGG | 0.411498 | 6.1:-16608733 | None:intergenic |
| ATGAAGGGAATGCCAAGAAC+TGG | 0.427423 | 6.1:+16608721 | MS.gene85727:CDS |
| TGCAGGAGAGACCAATGTTC+AGG | 0.427688 | 6.1:+16606165 | MS.gene85727:CDS |
| ATGTTGGAAGAGCCGTCTAA+TGG | 0.435353 | 6.1:-16607306 | None:intergenic |
| GCAGAATATACCTTAATGTC+AGG | 0.435699 | 6.1:-16607959 | None:intergenic |
| TTTGTCAGCAGGGTACAAAA+AGG | 0.440471 | 6.1:-16609862 | None:intergenic |
| ATCGATTGTGGTGTTTCCAT+TGG | 0.440634 | 6.1:+16607327 | MS.gene85727:CDS |
| GCTGGTCTTGCAAAGCTCAT+TGG | 0.453630 | 6.1:+16606139 | MS.gene85727:CDS |
| AATGTCCTTCTTGATGGAAC+AGG | 0.459315 | 6.1:+16610029 | MS.gene85727:CDS |
| AAGATTTATTCAGTGAATGA+AGG | 0.460520 | 6.1:+16608705 | MS.gene85727:CDS |
| AGCCTTGCAGAACACCTCAT+TGG | 0.474174 | 6.1:-16606777 | None:intergenic |
| GGCTTTCACCGGCAAGGAAA+GGG | 0.474657 | 6.1:+16610062 | MS.gene85727:CDS |
| CATCATCTATGACTGGTTCA+TGG | 0.489912 | 6.1:-16607682 | None:intergenic |
| TCATAGCTACCAAGAAATAT+GGG | 0.491600 | 6.1:-16610778 | None:intergenic |
| TTCCAATGAGGTGTTCTGCA+AGG | 0.494248 | 6.1:+16606775 | MS.gene85727:CDS |
| AACAATGTTATTAAGCAAGA+TGG | 0.499875 | 6.1:-16604791 | None:intergenic |
| GTTCCATCAAGAAGGACATT+GGG | 0.503823 | 6.1:-16610026 | None:intergenic |
| GATGGAACAGGCAGGAGGAC+AGG | 0.504743 | 6.1:+16610041 | MS.gene85727:CDS |
| GCTGCTAACATGTTCTTCCC+TGG | 0.509552 | 6.1:-16607713 | None:intergenic |
| AGGCTTTCACCGGCAAGGAA+AGG | 0.509795 | 6.1:+16610061 | MS.gene85727:CDS |
| ATATATCTAAGAGACTTTGC+TGG | 0.512421 | 6.1:-16608886 | None:intergenic |
| AGGATAAACTCGCCAAGAGA+AGG | 0.516852 | 6.1:-16607929 | None:intergenic |
| AACAACTTTCCACGCTGCTT+AGG | 0.518664 | 6.1:-16606949 | None:intergenic |
| GCAGCTGGTTATTGCATGTA+CGG | 0.523788 | 6.1:+16607731 | MS.gene85727:CDS |
| AAATGCAAGTTTCCAACAGA+TGG | 0.529309 | 6.1:+16608859 | MS.gene85727:CDS |
| TAGATGATGTTCTGCAACCA+GGG | 0.531413 | 6.1:+16607696 | MS.gene85727:CDS |
| TCTTTGCAGATCCCAAAGAA+AGG | 0.537179 | 6.1:+16608681 | MS.gene85727:intron |
| TGTTCCATCAAGAAGGACAT+TGG | 0.542151 | 6.1:-16610027 | None:intergenic |
| GGGAACACTTACCTGAACAT+TGG | 0.543127 | 6.1:-16606176 | None:intergenic |
| AGATGAGGATGCAATATTCG+TGG | 0.547860 | 6.1:+16606924 | MS.gene85727:CDS |
| GCAGGAGGACAGGCTTTCAC+CGG | 0.548518 | 6.1:+16610051 | MS.gene85727:CDS |
| TTTGCTGGTGAACCATCTGT+TGG | 0.549730 | 6.1:-16608871 | None:intergenic |
| TCCTGCCTGTTCCATCAAGA+AGG | 0.554789 | 6.1:-16610034 | None:intergenic |
| ATAGATGATGTTCTGCAACC+AGG | 0.557336 | 6.1:+16607695 | MS.gene85727:CDS |
| GGAAACACCACAATCGATGT+TGG | 0.558592 | 6.1:-16607322 | None:intergenic |
| GGGAAGAACATGTTAGCAGC+TGG | 0.562041 | 6.1:+16607716 | MS.gene85727:CDS |
| TTGCAGTTTGTGATAACCAC+TGG | 0.562279 | 6.1:+16607878 | MS.gene85727:intron |
| TAGGGATCATACAGTTCCAA+TGG | 0.562520 | 6.1:-16607343 | None:intergenic |
| CAAAGCTCTTTATGCTGCAG+AGG | 0.565129 | 6.1:+16610816 | MS.gene85727:CDS |
| TGCAGAACATCATCTATGAC+TGG | 0.575640 | 6.1:-16607689 | None:intergenic |
| CTTGGTTTCTGAAGAAGATG+AGG | 0.575814 | 6.1:+16606909 | MS.gene85727:CDS |
| AGATTTATTCAGTGAATGAA+GGG | 0.580033 | 6.1:+16608706 | MS.gene85727:CDS |
| GGCTCTTCCAACATCGATTG+TGG | 0.580554 | 6.1:+16607315 | MS.gene85727:CDS |
| TGCAAGGCTTTGATAAGCAG+TGG | 0.582350 | 6.1:+16606791 | MS.gene85727:CDS |
| ACCATTAACACCACTTCCAG+TGG | 0.586134 | 6.1:-16607894 | None:intergenic |
| GGATAAACTCGCCAAGAGAA+GGG | 0.588099 | 6.1:-16607928 | None:intergenic |
| TCCTTCTTGATGGAACAGGC+AGG | 0.593282 | 6.1:+16610033 | MS.gene85727:CDS |
| CATGTACGGAAGCTCTTGCA+CGG | 0.593772 | 6.1:+16607745 | MS.gene85727:CDS |
| GCTTGATGTTCTTTCCAATG+AGG | 0.597378 | 6.1:+16606763 | MS.gene85727:CDS |
| TTTGTGATAACCACTGGAAG+TGG | 0.598951 | 6.1:+16607884 | MS.gene85727:CDS |
| CAGAATATACCTTAATGTCA+GGG | 0.600106 | 6.1:-16607958 | None:intergenic |
| TGTTTGTTCTGCTGTTAACA+AGG | 0.601443 | 6.1:+16604828 | MS.gene85727:CDS |
| GGGAATGCCAAGAACTGGGA+TGG | 0.611887 | 6.1:+16608726 | MS.gene85727:CDS |
| AGAGTCCCAATGGAAAACTT+CGG | 0.612489 | 6.1:+16609886 | MS.gene85727:CDS |
| AGTCTCTTAGATATATTGGA+AGG | 0.616044 | 6.1:+16608893 | MS.gene85727:CDS |
| ATTCATACGTACGCAGCGGT+AGG | 0.620838 | 6.1:-16608750 | None:intergenic |
| AGGACAGGCTTTCACCGGCA+AGG | 0.624102 | 6.1:+16610056 | MS.gene85727:CDS |
| TGAAGGGAATGCCAAGAACT+GGG | 0.636555 | 6.1:+16608722 | MS.gene85727:CDS |
| TACGATGTGCATCTGCGCTG+TGG | 0.637166 | 6.1:-16604696 | None:intergenic |
| CATCGTACATTGCTATATGG+AGG | 0.654004 | 6.1:+16609837 | MS.gene85727:CDS |
| TGGTAGCTATGATGATATCG+AGG | 0.676941 | 6.1:+16610789 | MS.gene85727:CDS |
| TTCTTGATGGAACAGGCAGG+AGG | 0.688021 | 6.1:+16610036 | MS.gene85727:CDS |
| TCTAAGCATCCTGAATCACG+TGG | 0.704682 | 6.1:+16604760 | MS.gene85727:CDS |
| TTCGTGGATCCTAAGCAGCG+TGG | 0.711587 | 6.1:+16606940 | MS.gene85727:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATAACTTAATTTTTTGT+TGG | + | chr6.1:16606261-16606280 | MS.gene85727:intron | 10.0% |
| !!! | ATTTATTTTTCTTTATTGTT+TGG | + | chr6.1:16606716-16606735 | MS.gene85727:intron | 10.0% |
| !!! | TCTAATTATTTTAATTTTGA+TGG | + | chr6.1:16609957-16609976 | MS.gene85727:intron | 10.0% |
| !!! | TTGAAAAGAATTTATTTTTA+CGG | + | chr6.1:16610368-16610387 | MS.gene85727:intron | 10.0% |
| !!! | TTTATTTTTTTTTACGATTT+AGG | + | chr6.1:16607265-16607284 | MS.gene85727:intron | 10.0% |
| !! | ACTTATTGTAATATTCAAAT+AGG | + | chr6.1:16608605-16608624 | MS.gene85727:intron | 15.0% |
| !! | CTTATTGTAATATTCAAATA+GGG | + | chr6.1:16608606-16608625 | MS.gene85727:intron | 15.0% |
| !! | TAAGATTGAAAATTTAACAA+TGG | + | chr6.1:16608802-16608821 | MS.gene85727:intron | 15.0% |
| !! | TGATGATATATTAAGTTATA+AGG | + | chr6.1:16606099-16606118 | MS.gene85727:intron | 15.0% |
| !!! | AAAATATAACTTTTTCATGA+TGG | + | chr6.1:16606437-16606456 | MS.gene85727:intron | 15.0% |
| !!! | AAATCACTTTTGATTAATTA+TGG | + | chr6.1:16606485-16606504 | MS.gene85727:intron | 15.0% |
| !!! | AACAATTTCTCATTTTAAAT+AGG | + | chr6.1:16610189-16610208 | MS.gene85727:intron | 15.0% |
| !!! | AAGCTAATATAATTTGTATT+TGG | + | chr6.1:16609934-16609953 | MS.gene85727:intron | 15.0% |
| !! | AAGAGATTTCAATAAAAGTA+TGG | + | chr6.1:16610438-16610457 | MS.gene85727:intron | 20.0% |
| !! | AATAAGTTTGCATTATAGAT+AGG | - | chr6.1:16608592-16608611 | None:intergenic | 20.0% |
| !! | ACATCATTTATGTTAATTGT+TGG | + | chr6.1:16608648-16608667 | MS.gene85727:intron | 20.0% |
| !! | ATATTGAGATGAAATCAATT+TGG | + | chr6.1:16606643-16606662 | MS.gene85727:intron | 20.0% |
| !! | CCAAATACATATTAACAATT+TGG | + | chr6.1:16606682-16606701 | MS.gene85727:intron | 20.0% |
| !! | CCAAATTGTTAATATGTATT+TGG | - | chr6.1:16606685-16606704 | None:intergenic | 20.0% |
| !! | CTTATTAGACATTTATAAGA+AGG | - | chr6.1:16610589-16610608 | None:intergenic | 20.0% |
| !! | CTTCTTATAAATGTCTAATA+AGG | + | chr6.1:16610587-16610606 | MS.gene85727:intron | 20.0% |
| !! | GAAGGAAAAAAAATATATGA+TGG | - | chr6.1:16610571-16610590 | None:intergenic | 20.0% |
| !! | TCTTGTGAATAAAAAAAATG+CGG | - | chr6.1:16609585-16609604 | None:intergenic | 20.0% |
| !! | TTAATTACTCCATTACAATT+CGG | + | chr6.1:16607844-16607863 | MS.gene85727:intron | 20.0% |
| !! | TTCAATGTAACTATATATGT+TGG | - | chr6.1:16605323-16605342 | None:intergenic | 20.0% |
| !!! | AAAAACAACTTATTTCTTAC+AGG | - | chr6.1:16609163-16609182 | None:intergenic | 20.0% |
| !!! | ACATACTTATAAGTTTGTTT+GGG | - | chr6.1:16606200-16606219 | None:intergenic | 20.0% |
| !!! | ATTAAGTTGTTTATCCAAAT+AGG | - | chr6.1:16605686-16605705 | None:intergenic | 20.0% |
| !!! | GAAGTTTAACTTTGATATTT+TGG | + | chr6.1:16607214-16607233 | MS.gene85727:intron | 20.0% |
| !!! | TAAAACAAAACAATTGCTTT+TGG | - | chr6.1:16610285-16610304 | None:intergenic | 20.0% |
| !!! | TATTTGTTTTCATTTTCCAT+AGG | + | chr6.1:16604873-16604892 | MS.gene85727:intron | 20.0% |
| !!! | TGAAAGATAATTGATGATTT+TGG | - | chr6.1:16609300-16609319 | None:intergenic | 20.0% |
| !!! | TGTGATTTTCTCAAATTATT+AGG | + | chr6.1:16605085-16605104 | MS.gene85727:intron | 20.0% |
| !!! | TTAAGTTGTTTATCCAAATA+GGG | - | chr6.1:16605685-16605704 | None:intergenic | 20.0% |
| !!! | TTATATTAGCTTAAACATTG+AGG | - | chr6.1:16609926-16609945 | None:intergenic | 20.0% |
| !!! | TTTTTCTTATTACAGTTATG+TGG | + | chr6.1:16608834-16608853 | MS.gene85727:intron | 20.0% |
| ! | AAAACAAGTATACATCACAT+TGG | - | chr6.1:16609657-16609676 | None:intergenic | 25.0% |
| ! | AAACATAGAATTATGATCAG+TGG | - | chr6.1:16604950-16604969 | None:intergenic | 25.0% |
| ! | AACAATGTTATTAAGCAAGA+TGG | - | chr6.1:16604794-16604813 | None:intergenic | 25.0% |
| ! | AAGATTTATTCAGTGAATGA+AGG | + | chr6.1:16608705-16608724 | MS.gene85727:CDS | 25.0% |
| ! | AATAAATCTTGCCTTTCTTT+GGG | - | chr6.1:16608695-16608714 | None:intergenic | 25.0% |
| ! | AATATGAAAAACAACACAGT+AGG | - | chr6.1:16607372-16607391 | None:intergenic | 25.0% |
| ! | ACCAAACTAGGATAAAAATA+AGG | - | chr6.1:16608519-16608538 | None:intergenic | 25.0% |
| ! | AGATTTATTCAGTGAATGAA+GGG | + | chr6.1:16608706-16608725 | MS.gene85727:CDS | 25.0% |
| ! | ATAATAAGAGTAGAGATACA+TGG | + | chr6.1:16610415-16610434 | MS.gene85727:intron | 25.0% |
| ! | ATATGAAAAACAACACAGTA+GGG | - | chr6.1:16607371-16607390 | None:intergenic | 25.0% |
| ! | CTAGAGTCTATAATTATTCA+TGG | + | chr6.1:16609246-16609265 | MS.gene85727:intron | 25.0% |
| ! | CTGTGATTGATATACAATTA+TGG | + | chr6.1:16605418-16605437 | MS.gene85727:intron | 25.0% |
| ! | GAAAACAACTTATAGCTTAT+TGG | - | chr6.1:16609112-16609131 | None:intergenic | 25.0% |
| ! | TAAAAGTTAATCGGTAAAGT+CGG | - | chr6.1:16609543-16609562 | None:intergenic | 25.0% |
| ! | TAATTACTCCATTACAATTC+GGG | + | chr6.1:16607845-16607864 | MS.gene85727:intron | 25.0% |
| ! | TCTATTTGCTTAAAACTTCA+TGG | + | chr6.1:16608078-16608097 | MS.gene85727:intron | 25.0% |
| ! | TCTCAAATTATTAGGAGTTT+CGG | + | chr6.1:16605093-16605112 | MS.gene85727:intron | 25.0% |
| ! | TGAATAAAAAAAATGCGGTT+GGG | - | chr6.1:16609580-16609599 | None:intergenic | 25.0% |
| ! | TTCAGTGTAATTATATGTGA+CGG | - | chr6.1:16605062-16605081 | None:intergenic | 25.0% |
| ! | TTGCTTAATAACATTGTTCT+TGG | + | chr6.1:16604796-16604815 | MS.gene85727:CDS | 25.0% |
| !! | ACTTCTAAGGAATTCAAAAA+AGG | - | chr6.1:16610615-16610634 | None:intergenic | 25.0% |
| !! | CATACTTATAAGTTTGTTTG+GGG | - | chr6.1:16606199-16606218 | None:intergenic | 25.0% |
| !! | GACATACTTATAAGTTTGTT+TGG | - | chr6.1:16606201-16606220 | None:intergenic | 25.0% |
| !! | TAGATTTTTCTTTTTTCTGC+AGG | + | chr6.1:16610215-16610234 | MS.gene85727:intron | 25.0% |
| !! | TCTTTATTGTTTGGAATGAA+GGG | + | chr6.1:16606725-16606744 | MS.gene85727:intron | 25.0% |
| !! | TGTTTAATAGCTTTTGATGA+TGG | + | chr6.1:16606864-16606883 | MS.gene85727:intron | 25.0% |
| !! | TTCAACAAATATCGTTTTGT+TGG | - | chr6.1:16610353-16610372 | None:intergenic | 25.0% |
| !! | TTCACATATATTCTCTAAGA+AGG | + | chr6.1:16607003-16607022 | MS.gene85727:intron | 25.0% |
| !! | TTCTTTATTGTTTGGAATGA+AGG | + | chr6.1:16606724-16606743 | MS.gene85727:intron | 25.0% |
| !! | TTGAACATTTTGCAGATTTT+TGG | + | chr6.1:16607638-16607657 | MS.gene85727:intron | 25.0% |
| !! | TTTTTGTACATTAAACAGCA+TGG | + | chr6.1:16609803-16609822 | MS.gene85727:intron | 25.0% |
| !!! | AAAAAGGTTGATATGAAGTA+AGG | + | chr6.1:16605240-16605259 | MS.gene85727:intron | 25.0% |
| !!! | AAATATCGTTTTGTTGGATT+AGG | - | chr6.1:16610347-16610366 | None:intergenic | 25.0% |
| !!! | AATATCGTTTTGTTGGATTA+GGG | - | chr6.1:16610346-16610365 | None:intergenic | 25.0% |
| !!! | ACTTAATTTTTTGTTGGATG+TGG | + | chr6.1:16606267-16606286 | MS.gene85727:intron | 25.0% |
| !!! | ATCAAATTTGATTTAGCTCT+TGG | + | chr6.1:16606393-16606412 | MS.gene85727:intron | 25.0% |
| !!! | CATATCAACCTTTTTTAATC+AGG | - | chr6.1:16605235-16605254 | None:intergenic | 25.0% |
| !!! | CTTAATTTTTTGTTGGATGT+GGG | + | chr6.1:16606268-16606287 | MS.gene85727:intron | 25.0% |
| !!! | GTGTTGTTTTTCATATTTGA+AGG | + | chr6.1:16607375-16607394 | MS.gene85727:intron | 25.0% |
| !!! | TAAGGTTTTGTTATATGTGT+AGG | + | chr6.1:16606117-16606136 | MS.gene85727:intron | 25.0% |
| !!! | TATTTTTACAACCCTGTTAT+TGG | + | chr6.1:16609504-16609523 | MS.gene85727:intron | 25.0% |
| !!! | TTGGTCTGATTAGTTTAATA+CGG | + | chr6.1:16607233-16607252 | MS.gene85727:intron | 25.0% |
| AAATAAGGCAAATTCTACAG+TGG | - | chr6.1:16608504-16608523 | None:intergenic | 30.0% | |
| AAGTAGTAAAATCAGCATGT+TGG | - | chr6.1:16610649-16610668 | None:intergenic | 30.0% | |
| AAGTTGTTTATCCAACTGAT+TGG | - | chr6.1:16605830-16605849 | None:intergenic | 30.0% | |
| ACAAATACGAAAAAGAGTGA+AGG | - | chr6.1:16604860-16604879 | None:intergenic | 30.0% | |
| ACCAGTGTTTAAAAATCACT+CGG | + | chr6.1:16608184-16608203 | MS.gene85727:intron | 30.0% | |
| AGATATCTTAAGTAAGGTCT+CGG | - | chr6.1:16609615-16609634 | None:intergenic | 30.0% | |
| AGTCTCTTAGATATATTGGA+AGG | + | chr6.1:16608893-16608912 | MS.gene85727:CDS | 30.0% | |
| AGTTGTTTATCCAACTGATT+GGG | - | chr6.1:16605829-16605848 | None:intergenic | 30.0% | |
| ATACATACACTCTTCACTAA+TGG | - | chr6.1:16609415-16609434 | None:intergenic | 30.0% | |
| ATAGCTATTGCTATAAGCTT+TGG | - | chr6.1:16609056-16609075 | None:intergenic | 30.0% | |
| ATATATCTAAGAGACTTTGC+TGG | - | chr6.1:16608889-16608908 | None:intergenic | 30.0% | |
| ATCAGTGCTTCATTAAACAT+GGG | + | chr6.1:16605155-16605174 | MS.gene85727:intron | 30.0% | |
| ATCATAGCTACCAAGAAATA+TGG | - | chr6.1:16610782-16610801 | None:intergenic | 30.0% | |
| ATTCAACACAAAACGTGTTA+TGG | - | chr6.1:16604734-16604753 | None:intergenic | 30.0% | |
| CAGAATATACCTTAATGTCA+GGG | - | chr6.1:16607961-16607980 | None:intergenic | 30.0% | |
| CGTCAGTTCAATAAAAAACA+AGG | - | chr6.1:16608347-16608366 | None:intergenic | 30.0% | |
| CTAAAGTTGACTACCTTAAT+AGG | + | chr6.1:16608148-16608167 | MS.gene85727:intron | 30.0% | |
| GAACTCAGATATCTTAAGTA+AGG | - | chr6.1:16609621-16609640 | None:intergenic | 30.0% | |
| GAATAAATCTTGCCTTTCTT+TGG | - | chr6.1:16608696-16608715 | None:intergenic | 30.0% | |
| GATACTTTACACCAATAACA+GGG | - | chr6.1:16609518-16609537 | None:intergenic | 30.0% | |
| GATGAATCTTCTATGATATC+AGG | + | chr6.1:16610717-16610736 | MS.gene85727:intron | 30.0% | |
| GATTGATATTCCATACTAAC+CGG | + | chr6.1:16607598-16607617 | MS.gene85727:intron | 30.0% | |
| GCAAAGTCTCTTAGATATAT+TGG | + | chr6.1:16608889-16608908 | MS.gene85727:CDS | 30.0% | |
| GGACTTCACTAAAAGTTAAT+CGG | - | chr6.1:16609552-16609571 | None:intergenic | 30.0% | |
| GTGAATAAAAAAAATGCGGT+TGG | - | chr6.1:16609581-16609600 | None:intergenic | 30.0% | |
| TAAACATTAATAGAGAGCAG+AGG | - | chr6.1:16608569-16608588 | None:intergenic | 30.0% | |
| TACATACACTCTTCACTAAT+GGG | - | chr6.1:16609414-16609433 | None:intergenic | 30.0% | |
| TAGAAGATTCATCAGTTGAT+TGG | - | chr6.1:16610710-16610729 | None:intergenic | 30.0% | |
| TATCAGTGCTTCATTAAACA+TGG | + | chr6.1:16605154-16605173 | MS.gene85727:intron | 30.0% | |
| TCATAGCTACCAAGAAATAT+GGG | - | chr6.1:16610781-16610800 | None:intergenic | 30.0% | |
| TGAGATTACTCTTGCAATAA+TGG | + | chr6.1:16606015-16606034 | MS.gene85727:intron | 30.0% | |
| TGATACTGCCTGATTAAAAA+AGG | + | chr6.1:16605224-16605243 | MS.gene85727:intron | 30.0% | |
| TTATGTTAATTGTTGGTGTG+TGG | + | chr6.1:16608655-16608674 | MS.gene85727:intron | 30.0% | |
| ! | AAGCATGTTAGACTCTTTTT+AGG | - | chr6.1:16608936-16608955 | None:intergenic | 30.0% |
| ! | ACTCTGATGTAAAGTTTGTT+CGG | - | chr6.1:16610523-16610542 | None:intergenic | 30.0% |
| ! | AGCATGTTAGACTCTTTTTA+GGG | - | chr6.1:16608935-16608954 | None:intergenic | 30.0% |
| ! | GATCTTTCATGCAATTTTGT+TGG | - | chr6.1:16610757-16610776 | None:intergenic | 30.0% |
| ! | TTACATTGCTGTTGTAATTG+TGG | + | chr6.1:16605549-16605568 | MS.gene85727:intron | 30.0% |
| !! | TTTTGGAAGTTTGCATCTTA+TGG | - | chr6.1:16610268-16610287 | None:intergenic | 30.0% |
| !!! | GCCTTATTTTTATCCTAGTT+TGG | + | chr6.1:16608515-16608534 | MS.gene85727:intron | 30.0% |
| !!! | GTTGTTTTTGATCCATTAGA+CGG | + | chr6.1:16607294-16607313 | MS.gene85727:CDS | 30.0% |
| !!! | TATGTTTTAACAGTGCATCT+TGG | + | chr6.1:16606891-16606910 | MS.gene85727:intron | 30.0% |
| AAAACAACACAGTAGGGATT+AGG | - | chr6.1:16607365-16607384 | None:intergenic | 35.0% | |
| AAACAACACAGTAGGGATTA+GGG | - | chr6.1:16607364-16607383 | None:intergenic | 35.0% | |
| AAACCAAGTGCATAGAATAG+AGG | - | chr6.1:16609484-16609503 | None:intergenic | 35.0% | |
| AAATGCAAGTTTCCAACAGA+TGG | + | chr6.1:16608859-16608878 | MS.gene85727:CDS | 35.0% | |
| AAGTTAAACTTCTCCCTAGA+AGG | - | chr6.1:16607206-16607225 | None:intergenic | 35.0% | |
| AATAGAGGCTTAAGTCCAAT+TGG | - | chr6.1:16609469-16609488 | None:intergenic | 35.0% | |
| AATTGACACCGGAAATATTC+CGG | - | chr6.1:16607620-16607639 | None:intergenic | 35.0% | |
| ACATTGCTATAGCTGCTATT+TGG | - | chr6.1:16606565-16606584 | None:intergenic | 35.0% | |
| AGACTCAAGAAGCTGAAAAA+TGG | - | chr6.1:16609348-16609367 | None:intergenic | 35.0% | |
| AGTTGCTCATAGCTTAGTTA+GGG | - | chr6.1:16610486-16610505 | None:intergenic | 35.0% | |
| ATCAGATGCTGTTGTAATCA+AGG | + | chr6.1:16607065-16607084 | MS.gene85727:intron | 35.0% | |
| CAGGAAAACAATAAGCTCTT+TGG | - | chr6.1:16609144-16609163 | None:intergenic | 35.0% | |
| CATACTAACCGGAATATTTC+CGG | + | chr6.1:16607609-16607628 | MS.gene85727:intron | 35.0% | |
| CATAGAATTATGATCAGTGG+TGG | - | chr6.1:16604947-16604966 | None:intergenic | 35.0% | |
| CATGATGGCTAGTAAAATGA+AGG | + | chr6.1:16606452-16606471 | MS.gene85727:intron | 35.0% | |
| CCATGACTGTATATCAATCA+CGG | - | chr6.1:16605500-16605519 | None:intergenic | 35.0% | |
| CGACAATTCAAAACCTTCTA+GGG | + | chr6.1:16607190-16607209 | MS.gene85727:intron | 35.0% | |
| GAAAGATCTCCCATATTTCT+TGG | + | chr6.1:16610769-16610788 | MS.gene85727:CDS | 35.0% | |
| GATATCTTAAGTAAGGTCTC+GGG | - | chr6.1:16609614-16609633 | None:intergenic | 35.0% | |
| GCAAAATGTTCAATTGACAC+CGG | - | chr6.1:16607631-16607650 | None:intergenic | 35.0% | |
| GCAGAATATACCTTAATGTC+AGG | - | chr6.1:16607962-16607981 | None:intergenic | 35.0% | |
| GGATACTTTACACCAATAAC+AGG | - | chr6.1:16609519-16609538 | None:intergenic | 35.0% | |
| GTAATTATATGTGACGGTGT+CGG | - | chr6.1:16605056-16605075 | None:intergenic | 35.0% | |
| GTATGGAAATTAGCATAACG+TGG | + | chr6.1:16610455-16610474 | MS.gene85727:intron | 35.0% | |
| GTGTCAATTCGACAAATTCA+AGG | + | chr6.1:16608280-16608299 | MS.gene85727:intron | 35.0% | |
| GTTCATCGTACATTGCTATA+TGG | + | chr6.1:16609834-16609853 | MS.gene85727:CDS | 35.0% | |
| TAAAAAAAATGCGGTTGGGA+TGG | - | chr6.1:16609576-16609595 | None:intergenic | 35.0% | |
| TAGTTGCTCATAGCTTAGTT+AGG | - | chr6.1:16610487-16610506 | None:intergenic | 35.0% | |
| TCGACAATTCAAAACCTTCT+AGG | + | chr6.1:16607189-16607208 | MS.gene85727:intron | 35.0% | |
| TGGCTAGTAAAATGAAGGTT+TGG | + | chr6.1:16606457-16606476 | MS.gene85727:intron | 35.0% | |
| TGTGATCTGTTCATAACTCT+TGG | + | chr6.1:16609371-16609390 | MS.gene85727:intron | 35.0% | |
| TGTTTGTTCTGCTGTTAACA+AGG | + | chr6.1:16604828-16604847 | MS.gene85727:CDS | 35.0% | |
| TTCATGGAACTAGCATTACT+AGG | + | chr6.1:16608094-16608113 | MS.gene85727:intron | 35.0% | |
| TTGATTACAACAGCATCTGA+TGG | - | chr6.1:16607066-16607085 | None:intergenic | 35.0% | |
| TTTGTGGGCAATAACTAATG+AGG | - | chr6.1:16609439-16609458 | None:intergenic | 35.0% | |
| ! | AACATACCGAAGTTTTCCAT+TGG | - | chr6.1:16609895-16609914 | None:intergenic | 35.0% |
| ! | ACATACCGAAGTTTTCCATT+GGG | - | chr6.1:16609894-16609913 | None:intergenic | 35.0% |
| ! | AGAACCTGAGTTCGATTTTT+GGG | - | chr6.1:16605806-16605825 | None:intergenic | 35.0% |
| ! | TAAGTGTGTGTTTGGAATTG+CGG | + | chr6.1:16605614-16605633 | MS.gene85727:intron | 35.0% |
| ! | TACATTATCAAGCATTGTGC+CGG | + | chr6.1:16607156-16607175 | MS.gene85727:intron | 35.0% |
| ! | TATTTGAAGGCATGTATGTC+TGG | + | chr6.1:16607388-16607407 | MS.gene85727:intron | 35.0% |
| ! | TCCGAGTGATTTTTAAACAC+TGG | - | chr6.1:16608188-16608207 | None:intergenic | 35.0% |
| ! | TTTATTTGCTAGTAACACCC+TGG | + | chr6.1:16605706-16605725 | MS.gene85727:intron | 35.0% |
| !! | AGGTTGATATGAAGTAAGGA+AGG | + | chr6.1:16605244-16605263 | MS.gene85727:intron | 35.0% |
| !! | ATACGAACTTGCTCATTTTG+AGG | + | chr6.1:16608119-16608138 | MS.gene85727:intron | 35.0% |
| !! | CCAATTGGTTCAACTTTTGT+GGG | - | chr6.1:16609454-16609473 | None:intergenic | 35.0% |
| !! | GGATGAGTTCTAAACTTCTA+AGG | - | chr6.1:16610628-16610647 | None:intergenic | 35.0% |
| !! | GTCAAGCTCTAAACAAATAC+TGG | - | chr6.1:16608547-16608566 | None:intergenic | 35.0% |
| !! | GTTTTGTTATATGTGTAGGC+TGG | + | chr6.1:16606121-16606140 | MS.gene85727:intron | 35.0% |
| !! | TCCAATTGGTTCAACTTTTG+TGG | - | chr6.1:16609455-16609474 | None:intergenic | 35.0% |
| !! | TTTTAAACACTGGTCTACCA+TGG | - | chr6.1:16608178-16608197 | None:intergenic | 35.0% |
| !!! | ATTTTGAGTTACCATGCTCA+GGG | + | chr6.1:16604921-16604940 | MS.gene85727:intron | 35.0% |
| !!! | GATTTTCAAGTACCAGTCTA+TGG | + | chr6.1:16608457-16608476 | MS.gene85727:intron | 35.0% |
| AAGCCTCTATTCTATGCACT+TGG | + | chr6.1:16609478-16609497 | MS.gene85727:intron | 40.0% | |
| AAGTTAATCGGTAAAGTCGG+TGG | - | chr6.1:16609540-16609559 | None:intergenic | 40.0% | |
| AATGTCCTTCTTGATGGAAC+AGG | + | chr6.1:16610029-16610048 | MS.gene85727:CDS | 40.0% | |
| ACAACGTCAAAACCGTAGAT+TGG | - | chr6.1:16605583-16605602 | None:intergenic | 40.0% | |
| AGAGTCCCAATGGAAAACTT+CGG | + | chr6.1:16609886-16609905 | MS.gene85727:CDS | 40.0% | |
| AGATGAGGATGCAATATTCG+TGG | + | chr6.1:16606924-16606943 | MS.gene85727:CDS | 40.0% | |
| AGTGCCAAACATAAAGGCTA+AGG | + | chr6.1:16605659-16605678 | MS.gene85727:intron | 40.0% | |
| ATAAAGGCTAAGGCCCTATT+TGG | + | chr6.1:16605669-16605688 | MS.gene85727:intron | 40.0% | |
| ATAGATGATGTTCTGCAACC+AGG | + | chr6.1:16607695-16607714 | MS.gene85727:CDS | 40.0% | |
| ATCGATTGTGGTGTTTCCAT+TGG | + | chr6.1:16607327-16607346 | MS.gene85727:CDS | 40.0% | |
| ATGCTTACTGCCCATGTATT+AGG | + | chr6.1:16608950-16608969 | MS.gene85727:intron | 40.0% | |
| CAGTAGATCCCGAATTGTAA+TGG | - | chr6.1:16607856-16607875 | None:intergenic | 40.0% | |
| CATCGTACATTGCTATATGG+AGG | + | chr6.1:16609837-16609856 | MS.gene85727:CDS | 40.0% | |
| CATTACAATTCGGGATCTAC+TGG | + | chr6.1:16607854-16607873 | MS.gene85727:intron | 40.0% | |
| CCAAACAAGGCCTAATACAT+GGG | - | chr6.1:16608963-16608982 | None:intergenic | 40.0% | |
| CCCACAAAAGTTGAACCAAT+TGG | + | chr6.1:16609451-16609470 | MS.gene85727:intron | 40.0% | |
| CCGTGATTGATATACAGTCA+TGG | + | chr6.1:16605497-16605516 | MS.gene85727:intron | 40.0% | |
| CGGAAATATTCCGGTTAGTA+TGG | - | chr6.1:16607611-16607630 | None:intergenic | 40.0% | |
| CTACAGTGGATCAATTCGAT+AGG | - | chr6.1:16608490-16608509 | None:intergenic | 40.0% | |
| CTACCATGGACAACCTATTA+AGG | - | chr6.1:16608164-16608183 | None:intergenic | 40.0% | |
| CTACCTTAATAGGTTGTCCA+TGG | + | chr6.1:16608158-16608177 | MS.gene85727:intron | 40.0% | |
| GCATTCAGTGCCAAACATAA+AGG | + | chr6.1:16605653-16605672 | MS.gene85727:intron | 40.0% | |
| GCTACAATGCACGACAAAAT+CGG | - | chr6.1:16607044-16607063 | None:intergenic | 40.0% | |
| GCTTATCTTGATAAGCGCTT+AGG | + | chr6.1:16605859-16605878 | MS.gene85727:intron | 40.0% | |
| GCTTGATGTTCTTTCCAATG+AGG | + | chr6.1:16606763-16606782 | MS.gene85727:CDS | 40.0% | |
| GGAGACTTTAAGTGTGTGTT+TGG | + | chr6.1:16605606-16605625 | MS.gene85727:intron | 40.0% | |
| GGTCTGTTCAAATTCTGCTA+CGG | - | chr6.1:16606596-16606615 | None:intergenic | 40.0% | |
| GGTTGAAGAGACATCAAAAG+TGG | + | chr6.1:16605439-16605458 | MS.gene85727:intron | 40.0% | |
| GTCAGTATCCATATCATGTC+TGG | + | chr6.1:16605119-16605138 | MS.gene85727:intron | 40.0% | |
| GTCTGAGTTCATAAGCTCTT+TGG | - | chr6.1:16609195-16609214 | None:intergenic | 40.0% | |
| GTTCCATCAAGAAGGACATT+GGG | - | chr6.1:16610029-16610048 | None:intergenic | 40.0% | |
| TAGATGATGTTCTGCAACCA+GGG | + | chr6.1:16607696-16607715 | MS.gene85727:CDS | 40.0% | |
| TAGGGATCATACAGTTCCAA+TGG | - | chr6.1:16607346-16607365 | None:intergenic | 40.0% | |
| TATCTGAGTTCAGTTCCACT+CGG | + | chr6.1:16609630-16609649 | MS.gene85727:intron | 40.0% | |
| TCCAAACAAGGCCTAATACA+TGG | - | chr6.1:16608964-16608983 | None:intergenic | 40.0% | |
| TCTTTGCAGATCCCAAAGAA+AGG | + | chr6.1:16608681-16608700 | MS.gene85727:intron | 40.0% | |
| TGCAGAACATCATCTATGAC+TGG | - | chr6.1:16607692-16607711 | None:intergenic | 40.0% | |
| TGCTTAGACAGTGACTTAAC+TGG | - | chr6.1:16608370-16608389 | None:intergenic | 40.0% | |
| TGGTAGCTATGATGATATCG+AGG | + | chr6.1:16610789-16610808 | MS.gene85727:CDS | 40.0% | |
| TGTTCCATCAAGAAGGACAT+TGG | - | chr6.1:16610030-16610049 | None:intergenic | 40.0% | |
| TTCCAAACTCCAAAAACGAC+AGG | - | chr6.1:16608436-16608455 | None:intergenic | 40.0% | |
| TTGCAGTTTGTGATAACCAC+TGG | + | chr6.1:16607878-16607897 | MS.gene85727:intron | 40.0% | |
| TTTGTCAGCAGGGTACAAAA+AGG | - | chr6.1:16609865-16609884 | None:intergenic | 40.0% | |
| TTTGTGATAACCACTGGAAG+TGG | + | chr6.1:16607884-16607903 | MS.gene85727:CDS | 40.0% | |
| ! | ACATTATCAAGCATTGTGCC+GGG | + | chr6.1:16607157-16607176 | MS.gene85727:intron | 40.0% |
| ! | CATCATCTATGACTGGTTCA+TGG | - | chr6.1:16607685-16607704 | None:intergenic | 40.0% |
| ! | CTTGGTTTCTGAAGAAGATG+AGG | + | chr6.1:16606909-16606928 | MS.gene85727:CDS | 40.0% |
| ! | GAGAACCTGAGTTCGATTTT+TGG | - | chr6.1:16605807-16605826 | None:intergenic | 40.0% |
| ! | GTTAGTGTTTCTGTTGTGTC+TGG | + | chr6.1:16605380-16605399 | MS.gene85727:intron | 40.0% |
| ! | TTTCAAGTACCAGTCTATGG+TGG | + | chr6.1:16608460-16608479 | MS.gene85727:intron | 40.0% |
| ! | TTTGGCACTGAATGCGATAT+TGG | - | chr6.1:16605648-16605667 | None:intergenic | 40.0% |
| !! | ATACTGGTTTCGACCAAACT+AGG | - | chr6.1:16608531-16608550 | None:intergenic | 40.0% |
| !! | ATGAAGCACTGATACGAACA+AGG | - | chr6.1:16605148-16605167 | None:intergenic | 40.0% |
| !! | TACGAAGCACTGATACTTCT+CGG | + | chr6.1:16604995-16605014 | MS.gene85727:intron | 40.0% |
| !!! | GATTTTGAGTTACCATGCTC+AGG | + | chr6.1:16604920-16604939 | MS.gene85727:intron | 40.0% |
| AAAAAATGCGGTTGGGATGG+AGG | - | chr6.1:16609573-16609592 | None:intergenic | 45.0% | |
| AACAACTTTCCACGCTGCTT+AGG | - | chr6.1:16606952-16606971 | None:intergenic | 45.0% | |
| AACTTTCGTTAGAGCTGAGC+AGG | - | chr6.1:16608042-16608061 | None:intergenic | 45.0% | |
| AAGTCACTGTCTAAGCAACG+AGG | + | chr6.1:16608373-16608392 | MS.gene85727:intron | 45.0% | |
| AATTGTCGACATCATGTCCC+CGG | - | chr6.1:16607178-16607197 | None:intergenic | 45.0% | |
| ACCAAGTCACCATAAAGACG+AGG | - | chr6.1:16608258-16608277 | None:intergenic | 45.0% | |
| ACCATTAACACCACTTCCAG+TGG | - | chr6.1:16607897-16607916 | None:intergenic | 45.0% | |
| ACCCTGGTTTCTTTCACAAG+CGG | + | chr6.1:16605722-16605741 | MS.gene85727:intron | 45.0% | |
| ACTGAGACATGCCTAATACG+AGG | - | chr6.1:16605275-16605294 | None:intergenic | 45.0% | |
| AGGATAAACTCGCCAAGAGA+AGG | - | chr6.1:16607932-16607951 | None:intergenic | 45.0% | |
| AGTCACTGTCTAAGCAACGA+GGG | + | chr6.1:16608374-16608393 | MS.gene85727:intron | 45.0% | |
| ATACATCACATTGGTCCGAG+TGG | - | chr6.1:16609648-16609667 | None:intergenic | 45.0% | |
| ATAGGTGATCCACCATAGAC+TGG | - | chr6.1:16608472-16608491 | None:intergenic | 45.0% | |
| ATGAAGGGAATGCCAAGAAC+TGG | + | chr6.1:16608721-16608740 | MS.gene85727:CDS | 45.0% | |
| ATGCATTACCCTTTCCTTGC+CGG | - | chr6.1:16610073-16610092 | None:intergenic | 45.0% | |
| ATGTTGGAAGAGCCGTCTAA+TGG | - | chr6.1:16607309-16607328 | None:intergenic | 45.0% | |
| CAAAGCTCTTTATGCTGCAG+AGG | + | chr6.1:16610816-16610835 | MS.gene85727:CDS | 45.0% | |
| CAACCAAACTCCAGATCAGT+GGG | - | chr6.1:16605749-16605768 | None:intergenic | 45.0% | |
| CAAGGACACCAGACATGATA+TGG | - | chr6.1:16605130-16605149 | None:intergenic | 45.0% | |
| CACACATGTTTGTGTCATGC+CGG | - | chr6.1:16607440-16607459 | None:intergenic | 45.0% | |
| CCTAACTCACCCTGACATTA+AGG | + | chr6.1:16607949-16607968 | MS.gene85727:CDS | 45.0% | |
| CCTTAATGTCAGGGTGAGTT+AGG | - | chr6.1:16607952-16607971 | None:intergenic | 45.0% | |
| CGTCAAGTGCAGAAAACCTA+TGG | - | chr6.1:16604892-16604911 | None:intergenic | 45.0% | |
| CTGAATTCATACGTACGCAG+CGG | - | chr6.1:16608757-16608776 | None:intergenic | 45.0% | |
| CTTCCCAATGTCCTTCTTGA+TGG | + | chr6.1:16610023-16610042 | MS.gene85727:CDS | 45.0% | |
| GAAACACTAACACGTCGACA+CGG | - | chr6.1:16605371-16605390 | None:intergenic | 45.0% | |
| GCAGCTGGTTATTGCATGTA+CGG | + | chr6.1:16607731-16607750 | MS.gene85727:CDS | 45.0% | |
| GCTGACAAAAAGAGTCCCAA+TGG | + | chr6.1:16609876-16609895 | MS.gene85727:CDS | 45.0% | |
| GGAAACACCACAATCGATGT+TGG | - | chr6.1:16607325-16607344 | None:intergenic | 45.0% | |
| GGATAAACTCGCCAAGAGAA+GGG | - | chr6.1:16607931-16607950 | None:intergenic | 45.0% | |
| GGGAACACTTACCTGAACAT+TGG | - | chr6.1:16606179-16606198 | None:intergenic | 45.0% | |
| GTCTGGTGTTCAACATGTGT+CGG | + | chr6.1:16607405-16607424 | MS.gene85727:intron | 45.0% | |
| GTGAAATCTCCACGTGATTC+AGG | - | chr6.1:16604772-16604791 | None:intergenic | 45.0% | |
| GTGGTTAAGCTGCCAATCTA+CGG | + | chr6.1:16605568-16605587 | MS.gene85727:intron | 45.0% | |
| TCCACCCAAAAATCGAACTC+AGG | + | chr6.1:16605799-16605818 | MS.gene85727:intron | 45.0% | |
| TCCTCGTCTTTATGGTGACT+TGG | + | chr6.1:16608254-16608273 | MS.gene85727:intron | 45.0% | |
| TCGCAGATCGCAACATATAG+TGG | - | chr6.1:16606617-16606636 | None:intergenic | 45.0% | |
| TCTAAGCATCCTGAATCACG+TGG | + | chr6.1:16604760-16604779 | MS.gene85727:CDS | 45.0% | |
| TGAAGGGAATGCCAAGAACT+GGG | + | chr6.1:16608722-16608741 | MS.gene85727:CDS | 45.0% | |
| TGTGAGCTTCTACTGCCAAT+GGG | - | chr6.1:16608233-16608252 | None:intergenic | 45.0% | |
| TGTGAGCTTCTACTTCCAGA+AGG | + | chr6.1:16608405-16608424 | MS.gene85727:intron | 45.0% | |
| TGTTTGTGTCATGCCGGTAT+CGG | - | chr6.1:16607434-16607453 | None:intergenic | 45.0% | |
| TTTGCTGGTGAACCATCTGT+TGG | - | chr6.1:16608874-16608893 | None:intergenic | 45.0% | |
| ! | ACCACTGGAAGTGGTGTTAA+TGG | + | chr6.1:16607893-16607912 | MS.gene85727:CDS | 45.0% |
| ! | ACTCTTCACTAATGGGTCAG+TGG | - | chr6.1:16609407-16609426 | None:intergenic | 45.0% |
| ! | AGGGCCTTAGCCTTTATGTT+TGG | - | chr6.1:16605666-16605685 | None:intergenic | 45.0% |
| ! | CACTGATCTGGAGTTTGGTT+GGG | + | chr6.1:16605748-16605767 | MS.gene85727:intron | 45.0% |
| ! | CATTATCAAGCATTGTGCCG+GGG | + | chr6.1:16607158-16607177 | MS.gene85727:intron | 45.0% |
| ! | GCACTGATACTTCTCGGATT+AGG | + | chr6.1:16605001-16605020 | MS.gene85727:intron | 45.0% |
| ! | GCTCAGCTCTAACGAAAGTT+GGG | + | chr6.1:16608042-16608061 | MS.gene85727:intron | 45.0% |
| ! | TGCAAGGCTTTGATAAGCAG+TGG | + | chr6.1:16606791-16606810 | MS.gene85727:CDS | 45.0% |
| ! | TGCTCAGCTCTAACGAAAGT+TGG | + | chr6.1:16608041-16608060 | MS.gene85727:intron | 45.0% |
| ! | TGGGACTCTTTTTGTCAGCA+GGG | - | chr6.1:16609875-16609894 | None:intergenic | 45.0% |
| ! | TTCCAATGAGGTGTTCTGCA+AGG | + | chr6.1:16606775-16606794 | MS.gene85727:CDS | 45.0% |
| ! | TTGGGACTCTTTTTGTCAGC+AGG | - | chr6.1:16609876-16609895 | None:intergenic | 45.0% |
| !! | ACCTGAGTTCGATTTTTGGG+TGG | - | chr6.1:16605803-16605822 | None:intergenic | 45.0% |
| !! | CCCATGTATTAGGCCTTGTT+TGG | + | chr6.1:16608960-16608979 | MS.gene85727:intron | 45.0% |
| !! | CGAACTTGCTCATTTTGAGG+CGG | + | chr6.1:16608122-16608141 | MS.gene85727:intron | 45.0% |
| !! | CTACGGTTTTGACGTTGTTG+TGG | + | chr6.1:16605585-16605604 | MS.gene85727:intron | 45.0% |
| !! | GATTAGGAGTGTCTTGGTGT+TGG | + | chr6.1:16605017-16605036 | MS.gene85727:intron | 45.0% |
| !! | TTCTCGGATTAGGAGTGTCT+TGG | + | chr6.1:16605011-16605030 | MS.gene85727:intron | 45.0% |
| !!! | AACTTGCTCATTTTGAGGCG+GGG | + | chr6.1:16608124-16608143 | MS.gene85727:intron | 45.0% |
| !!! | AAGGCAATGCCTGTCGTTTT+TGG | + | chr6.1:16608424-16608443 | MS.gene85727:intron | 45.0% |
| !!! | GAACTTGCTCATTTTGAGGC+GGG | + | chr6.1:16608123-16608142 | MS.gene85727:intron | 45.0% |
| !!! | TGCCTGTCGTTTTTGGAGTT+TGG | + | chr6.1:16608431-16608450 | MS.gene85727:intron | 45.0% |
| !!! | TTAAAAAATGATTTTTATTA+TGG | - | chr6.1:16610156-16610175 | None:intergenic | 5.0% |
| AGCAGTGGCAGAACAGTAAG+TGG | + | chr6.1:16606806-16606825 | MS.gene85727:intron | 50.0% | |
| AGCCTTGCAGAACACCTCAT+TGG | - | chr6.1:16606780-16606799 | None:intergenic | 50.0% | |
| ATTCATACGTACGCAGCGGT+AGG | - | chr6.1:16608753-16608772 | None:intergenic | 50.0% | |
| CATGTACGGAAGCTCTTGCA+CGG | + | chr6.1:16607745-16607764 | MS.gene85727:CDS | 50.0% | |
| CCAACCAAACTCCAGATCAG+TGG | - | chr6.1:16605750-16605769 | None:intergenic | 50.0% | |
| CCCGCTTGTGAAAGAAACCA+GGG | - | chr6.1:16605726-16605745 | None:intergenic | 50.0% | |
| CCCTGGTTTCTTTCACAAGC+GGG | + | chr6.1:16605723-16605742 | MS.gene85727:intron | 50.0% | |
| CGGCATGACACAAACATGTG+TGG | + | chr6.1:16607438-16607457 | MS.gene85727:intron | 50.0% | |
| CTACTGCCAATGGGCGTATT+CGG | - | chr6.1:16608224-16608243 | None:intergenic | 50.0% | |
| CTCAGGTTCTCCCAATCAGT+TGG | + | chr6.1:16605816-16605835 | MS.gene85727:intron | 50.0% | |
| GCAAAGCTCATTGGACTTGC+AGG | + | chr6.1:16606148-16606167 | MS.gene85727:CDS | 50.0% | |
| GCTCACACTCCTCGTCTTTA+TGG | + | chr6.1:16608246-16608265 | MS.gene85727:intron | 50.0% | |
| GCTGCTAACATGTTCTTCCC+TGG | - | chr6.1:16607716-16607735 | None:intergenic | 50.0% | |
| GGAAGGACACTCCTCGTATT+AGG | + | chr6.1:16605261-16605280 | MS.gene85727:intron | 50.0% | |
| GGGAAGAACATGTTAGCAGC+TGG | + | chr6.1:16607716-16607735 | MS.gene85727:CDS | 50.0% | |
| GTGTGAGCTTCTACTGCCAA+TGG | - | chr6.1:16608234-16608253 | None:intergenic | 50.0% | |
| TCCTGCCTGTTCCATCAAGA+AGG | - | chr6.1:16610037-16610056 | None:intergenic | 50.0% | |
| TCCTTCTTGATGGAACAGGC+AGG | + | chr6.1:16610033-16610052 | MS.gene85727:CDS | 50.0% | |
| TGCAGGAGAGACCAATGTTC+AGG | + | chr6.1:16606165-16606184 | MS.gene85727:CDS | 50.0% | |
| TTCACTCTCGACCCTTCTCT+TGG | + | chr6.1:16607917-16607936 | MS.gene85727:CDS | 50.0% | |
| TTCTTGATGGAACAGGCAGG+AGG | + | chr6.1:16610036-16610055 | MS.gene85727:CDS | 50.0% | |
| ! | AAACGACAGGCATTGCCTTC+TGG | - | chr6.1:16608423-16608442 | None:intergenic | 50.0% |
| ! | CCACTGATCTGGAGTTTGGT+TGG | + | chr6.1:16605747-16605766 | MS.gene85727:intron | 50.0% |
| ! | GGCTCTTCCAACATCGATTG+TGG | + | chr6.1:16607315-16607334 | MS.gene85727:CDS | 50.0% |
| ! | TGATCTGGAGTTTGGTTGGG+AGG | + | chr6.1:16605751-16605770 | MS.gene85727:intron | 50.0% |
| !! | GCTGGTCTTGCAAAGCTCAT+TGG | + | chr6.1:16606139-16606158 | MS.gene85727:CDS | 50.0% |
| AGGCTTTCACCGGCAAGGAA+AGG | + | chr6.1:16610061-16610080 | MS.gene85727:CDS | 55.0% | |
| CAACGACCGAATACGCCCAT+TGG | + | chr6.1:16608215-16608234 | MS.gene85727:intron | 55.0% | |
| GCCCGCTTGTGAAAGAAACC+AGG | - | chr6.1:16605727-16605746 | None:intergenic | 55.0% | |
| GGCTTTCACCGGCAAGGAAA+GGG | + | chr6.1:16610062-16610081 | MS.gene85727:CDS | 55.0% | |
| GGGAATGCCAAGAACTGGGA+TGG | + | chr6.1:16608726-16608745 | MS.gene85727:CDS | 55.0% | |
| GGTAGGACCATCCCAGTTCT+TGG | - | chr6.1:16608736-16608755 | None:intergenic | 55.0% | |
| TACGATGTGCATCTGCGCTG+TGG | - | chr6.1:16604699-16604718 | None:intergenic | 55.0% | |
| TTCGTGGATCCTAAGCAGCG+TGG | + | chr6.1:16606940-16606959 | MS.gene85727:CDS | 55.0% | |
| TTCGTTAGAGCTGAGCAGGC+AGG | - | chr6.1:16608038-16608057 | None:intergenic | 55.0% | |
| ! | CATGTGTCGGTGTCCGATAC+CGG | + | chr6.1:16607418-16607437 | MS.gene85727:intron | 55.0% |
| AGGACAGGCTTTCACCGGCA+AGG | + | chr6.1:16610056-16610075 | MS.gene85727:CDS | 60.0% | |
| ATCAGTGGTGGCCCTGAGCA+TGG | - | chr6.1:16604935-16604954 | None:intergenic | 60.0% | |
| GATGGAACAGGCAGGAGGAC+AGG | + | chr6.1:16610041-16610060 | MS.gene85727:CDS | 60.0% | |
| GCAGGAGGACAGGCTTTCAC+CGG | + | chr6.1:16610051-16610070 | MS.gene85727:CDS | 60.0% | |
| TTAGAGCTGAGCAGGCAGGC+AGG | - | chr6.1:16608034-16608053 | None:intergenic | 60.0% | |
| ! | GGGCCCACTGATCTGGAGTT+TGG | + | chr6.1:16605743-16605762 | MS.gene85727:intron | 60.0% |
| CACAAGCGGGCCCACTGATC+TGG | + | chr6.1:16605736-16605755 | MS.gene85727:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 16604691 | 16610846 | 16604691 | ID=MS.gene85727 |
| chr6.1 | mRNA | 16604691 | 16610846 | 16604691 | ID=MS.gene85727.t1;Parent=MS.gene85727 |
| chr6.1 | exon | 16604691 | 16604849 | 16604691 | ID=MS.gene85727.t1.exon1;Parent=MS.gene85727.t1 |
| chr6.1 | CDS | 16604691 | 16604849 | 16604691 | ID=cds.MS.gene85727.t1;Parent=MS.gene85727.t1 |
| chr6.1 | exon | 16606139 | 16606186 | 16606139 | ID=MS.gene85727.t1.exon2;Parent=MS.gene85727.t1 |
| chr6.1 | CDS | 16606139 | 16606186 | 16606139 | ID=cds.MS.gene85727.t1;Parent=MS.gene85727.t1 |
| chr6.1 | exon | 16606746 | 16606820 | 16606746 | ID=MS.gene85727.t1.exon3;Parent=MS.gene85727.t1 |
| chr6.1 | CDS | 16606746 | 16606820 | 16606746 | ID=cds.MS.gene85727.t1;Parent=MS.gene85727.t1 |
| chr6.1 | exon | 16606904 | 16606965 | 16606904 | ID=MS.gene85727.t1.exon4;Parent=MS.gene85727.t1 |
| chr6.1 | CDS | 16606904 | 16606965 | 16606904 | ID=cds.MS.gene85727.t1;Parent=MS.gene85727.t1 |
| chr6.1 | exon | 16607287 | 16607353 | 16607287 | ID=MS.gene85727.t1.exon5;Parent=MS.gene85727.t1 |
| chr6.1 | CDS | 16607287 | 16607353 | 16607287 | ID=cds.MS.gene85727.t1;Parent=MS.gene85727.t1 |
| chr6.1 | exon | 16607653 | 16607766 | 16607653 | ID=MS.gene85727.t1.exon6;Parent=MS.gene85727.t1 |
| chr6.1 | CDS | 16607653 | 16607766 | 16607653 | ID=cds.MS.gene85727.t1;Parent=MS.gene85727.t1 |
| chr6.1 | exon | 16607884 | 16607970 | 16607884 | ID=MS.gene85727.t1.exon7;Parent=MS.gene85727.t1 |
| chr6.1 | CDS | 16607884 | 16607970 | 16607884 | ID=cds.MS.gene85727.t1;Parent=MS.gene85727.t1 |
| chr6.1 | exon | 16608690 | 16608760 | 16608690 | ID=MS.gene85727.t1.exon8;Parent=MS.gene85727.t1 |
| chr6.1 | CDS | 16608690 | 16608760 | 16608690 | ID=cds.MS.gene85727.t1;Parent=MS.gene85727.t1 |
| chr6.1 | exon | 16608849 | 16608914 | 16608849 | ID=MS.gene85727.t1.exon9;Parent=MS.gene85727.t1 |
| chr6.1 | CDS | 16608849 | 16608914 | 16608849 | ID=cds.MS.gene85727.t1;Parent=MS.gene85727.t1 |
| chr6.1 | exon | 16609821 | 16609907 | 16609821 | ID=MS.gene85727.t1.exon10;Parent=MS.gene85727.t1 |
| chr6.1 | CDS | 16609821 | 16609907 | 16609821 | ID=cds.MS.gene85727.t1;Parent=MS.gene85727.t1 |
| chr6.1 | exon | 16610008 | 16610083 | 16610008 | ID=MS.gene85727.t1.exon11;Parent=MS.gene85727.t1 |
| chr6.1 | CDS | 16610008 | 16610083 | 16610008 | ID=cds.MS.gene85727.t1;Parent=MS.gene85727.t1 |
| chr6.1 | exon | 16610739 | 16610846 | 16610739 | ID=MS.gene85727.t1.exon12;Parent=MS.gene85727.t1 |
| chr6.1 | CDS | 16610739 | 16610846 | 16610739 | ID=cds.MS.gene85727.t1;Parent=MS.gene85727.t1 |
| Gene Sequence |
| Protein sequence |
