AlfalfaGEDB | MS.gene95112

M. sativa cultivar XinJiangDaYe / MS.gene95112

KEGG: K05389
GO: -
PFAM: PF07885.19

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene95112.t1	XP_003610592.2	86.6	351	10	1	1	314	1	351	1.60E-154	555.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene95112.t1	Q8LBL1	44.6	352	153	3	1	310	1	352	3.4e-68	260.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene95112.t1	G7JMW6	86.6	351	10	1	1	314	1	351	1.2e-154	555.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049137	MS.gene95112	0.823122	1.64E-53	-1.69E-46
MS.gene049222	MS.gene95112	0.800597	1.34E-48	-1.69E-46
MS.gene049356	MS.gene95112	0.826488	2.64E-54	-1.69E-46
MS.gene049369	MS.gene95112	0.813411	2.59E-51	-1.69E-46
MS.gene049396	MS.gene95112	0.822033	2.94E-53	-1.69E-46
MS.gene049488	MS.gene95112	0.820884	5.42E-53	-1.69E-46
MS.gene049609	MS.gene95112	0.882614	8.99E-71	-1.69E-46
MS.gene049633	MS.gene95112	0.800953	1.13E-48	-1.69E-46
MS.gene049661	MS.gene95112	0.817163	3.80E-52	-1.69E-46
MS.gene049662	MS.gene95112	0.815514	8.89E-52	-1.69E-46
MS.gene049794	MS.gene95112	0.807659	4.54E-50	-1.69E-46
MS.gene049805	MS.gene95112	0.855031	8.29E-62	-1.69E-46
MS.gene050397	MS.gene95112	0.828296	9.73E-55	-1.69E-46
MS.gene050426	MS.gene95112	-0.808211	3.46E-50	-1.69E-46
MS.gene050464	MS.gene95112	0.800527	1.38E-48	-1.69E-46
MS.gene050529	MS.gene95112	0.808218	3.45E-50	-1.69E-46
MS.gene050538	MS.gene95112	0.807033	6.16E-50	-1.69E-46
MS.gene050593	MS.gene95112	0.878165	3.50E-69	-1.69E-46
MS.gene050670	MS.gene95112	0.875128	3.93E-68	-1.69E-46
MS.gene050747	MS.gene95112	0.835147	1.99E-56	-1.69E-46
MS.gene050772	MS.gene95112	0.857612	1.45E-62	-1.69E-46
MS.gene05080	MS.gene95112	0.824945	6.13E-54	-1.69E-46
MS.gene05081	MS.gene95112	0.820397	7.01E-53	-1.69E-46
MS.gene050950	MS.gene95112	0.828646	8.01E-55	-1.69E-46
MS.gene05105	MS.gene95112	0.894799	1.76E-75	-1.69E-46
MS.gene051387	MS.gene95112	0.818062	2.38E-52	-1.69E-46
MS.gene051525	MS.gene95112	0.831325	1.78E-55	-1.69E-46
MS.gene051666	MS.gene95112	0.822811	1.94E-53	-1.69E-46
MS.gene051734	MS.gene95112	0.803641	3.16E-49	-1.69E-46
MS.gene051838	MS.gene95112	0.844955	5.48E-59	-1.69E-46
MS.gene051858	MS.gene95112	0.851868	6.70E-61	-1.69E-46
MS.gene051874	MS.gene95112	0.816429	5.56E-52	-1.69E-46
MS.gene052011	MS.gene95112	-0.815761	7.83E-52	-1.69E-46
MS.gene052134	MS.gene95112	0.832484	9.21E-56	-1.69E-46
MS.gene052135	MS.gene95112	0.825943	3.56E-54	-1.69E-46
MS.gene052136	MS.gene95112	0.841167	5.60E-58	-1.69E-46
MS.gene052188	MS.gene95112	0.828417	9.10E-55	-1.69E-46
MS.gene052253	MS.gene95112	0.828827	7.24E-55	-1.69E-46
MS.gene052310	MS.gene95112	0.820153	7.97E-53	-1.69E-46
MS.gene052340	MS.gene95112	0.800902	1.16E-48	-1.69E-46
MS.gene052346	MS.gene95112	0.851405	9.07E-61	-1.69E-46
MS.gene05240	MS.gene95112	-0.816687	4.86E-52	-1.69E-46
MS.gene052414	MS.gene95112	0.847945	8.38E-60	-1.69E-46
MS.gene052421	MS.gene95112	0.848949	4.42E-60	-1.69E-46
MS.gene052481	MS.gene95112	0.864389	1.26E-64	-1.69E-46
MS.gene052484	MS.gene95112	0.854927	8.89E-62	-1.69E-46
MS.gene052485	MS.gene95112	0.824229	9.04E-54	-1.69E-46
MS.gene052501	MS.gene95112	0.853541	2.23E-61	-1.69E-46
MS.gene052503	MS.gene95112	0.81094	8.98E-51	-1.69E-46
MS.gene052505	MS.gene95112	0.863953	1.72E-64	-1.69E-46
MS.gene052615	MS.gene95112	0.837259	5.78E-57	-1.69E-46
MS.gene052823	MS.gene95112	0.803581	3.26E-49	-1.69E-46
MS.gene052825	MS.gene95112	0.801265	9.77E-49	-1.69E-46
MS.gene052982	MS.gene95112	0.84786	8.85E-60	-1.69E-46
MS.gene052999	MS.gene95112	0.800113	1.68E-48	-1.69E-46
MS.gene053103	MS.gene95112	0.80163	8.22E-49	-1.69E-46
MS.gene053104	MS.gene95112	0.807228	5.60E-50	-1.69E-46
MS.gene053207	MS.gene95112	0.831128	1.99E-55	-1.69E-46
MS.gene053209	MS.gene95112	0.845633	3.59E-59	-1.69E-46
MS.gene053213	MS.gene95112	0.811305	7.48E-51	-1.69E-46
MS.gene053449	MS.gene95112	0.847819	9.08E-60	-1.69E-46
MS.gene053574	MS.gene95112	0.854791	9.73E-62	-1.69E-46
MS.gene053632	MS.gene95112	0.807817	4.20E-50	-1.69E-46
MS.gene053758	MS.gene95112	0.821847	3.25E-53	-1.69E-46
MS.gene053824	MS.gene95112	0.823346	1.46E-53	-1.69E-46
MS.gene053912	MS.gene95112	0.851412	9.03E-61	-1.69E-46
MS.gene053916	MS.gene95112	0.814412	1.56E-51	-1.69E-46
MS.gene054884	MS.gene95112	-0.807742	4.36E-50	-1.69E-46
MS.gene054927	MS.gene95112	0.838226	3.26E-57	-1.69E-46
MS.gene05494	MS.gene95112	0.827781	1.29E-54	-1.69E-46
MS.gene05505	MS.gene95112	0.860224	2.40E-63	-1.69E-46
MS.gene055116	MS.gene95112	0.862858	3.76E-64	-1.69E-46
MS.gene055206	MS.gene95112	0.836665	8.19E-57	-1.69E-46
MS.gene055224	MS.gene95112	0.805732	1.16E-49	-1.69E-46
MS.gene055289	MS.gene95112	0.867992	9.09E-66	-1.69E-46
MS.gene055577	MS.gene95112	0.807395	5.16E-50	-1.69E-46
MS.gene055722	MS.gene95112	0.861722	8.40E-64	-1.69E-46
MS.gene055741	MS.gene95112	0.819957	8.84E-53	-1.69E-46
MS.gene055744	MS.gene95112	0.822288	2.57E-53	-1.69E-46
MS.gene055909	MS.gene95112	0.804891	1.74E-49	-1.69E-46
MS.gene055911	MS.gene95112	0.806766	7.01E-50	-1.69E-46
MS.gene05592	MS.gene95112	0.829114	6.17E-55	-1.69E-46
MS.gene055941	MS.gene95112	0.818394	2.01E-52	-1.69E-46
MS.gene056166	MS.gene95112	0.810303	1.23E-50	-1.69E-46
MS.gene056422	MS.gene95112	0.819016	1.45E-52	-1.69E-46
MS.gene056448	MS.gene95112	0.840931	6.46E-58	-1.69E-46
MS.gene056511	MS.gene95112	0.888055	8.29E-73	-1.69E-46
MS.gene056877	MS.gene95112	0.807776	4.28E-50	-1.69E-46
MS.gene057048	MS.gene95112	0.806606	7.58E-50	-1.69E-46
MS.gene057076	MS.gene95112	0.874001	9.50E-68	-1.69E-46
MS.gene057124	MS.gene95112	0.872837	2.34E-67	-1.69E-46
MS.gene057146	MS.gene95112	0.825643	4.19E-54	-1.69E-46
MS.gene057310	MS.gene95112	0.816417	5.59E-52	-1.69E-46
MS.gene057331	MS.gene95112	0.83212	1.13E-55	-1.69E-46
MS.gene057416	MS.gene95112	0.827541	1.48E-54	-1.69E-46
MS.gene057734	MS.gene95112	0.837305	5.62E-57	-1.69E-46
MS.gene057749	MS.gene95112	0.827667	1.38E-54	-1.69E-46
MS.gene057823	MS.gene95112	0.834386	3.09E-56	-1.69E-46
MS.gene057856	MS.gene95112	0.82546	4.63E-54	-1.69E-46
MS.gene058006	MS.gene95112	0.82343	1.39E-53	-1.69E-46
MS.gene058007	MS.gene95112	0.803901	2.79E-49	-1.69E-46
MS.gene058019	MS.gene95112	0.802442	5.60E-49	-1.69E-46
MS.gene058130	MS.gene95112	0.83204	1.19E-55	-1.69E-46
MS.gene058338	MS.gene95112	0.815054	1.13E-51	-1.69E-46
MS.gene058376	MS.gene95112	0.831713	1.43E-55	-1.69E-46
MS.gene05837	MS.gene95112	0.812572	3.96E-51	-1.69E-46
MS.gene058419	MS.gene95112	0.80393	2.76E-49	-1.69E-46
MS.gene058444	MS.gene95112	0.829808	4.19E-55	-1.69E-46
MS.gene058660	MS.gene95112	0.803217	3.87E-49	-1.69E-46
MS.gene058700	MS.gene95112	0.827458	1.55E-54	-1.69E-46
MS.gene058723	MS.gene95112	0.801638	8.19E-49	-1.69E-46
MS.gene058838	MS.gene95112	0.826869	2.14E-54	-1.69E-46
MS.gene05883	MS.gene95112	0.830833	2.35E-55	-1.69E-46
MS.gene05886	MS.gene95112	0.803008	4.28E-49	-1.69E-46
MS.gene058928	MS.gene95112	0.83596	1.24E-56	-1.69E-46
MS.gene058948	MS.gene95112	0.8068	6.90E-50	-1.69E-46
MS.gene059023	MS.gene95112	0.803119	4.06E-49	-1.69E-46
MS.gene05913	MS.gene95112	0.800849	1.19E-48	-1.69E-46
MS.gene059141	MS.gene95112	0.800292	1.54E-48	-1.69E-46
MS.gene05934	MS.gene95112	0.824428	8.12E-54	-1.69E-46
MS.gene059366	MS.gene95112	0.841552	4.43E-58	-1.69E-46
MS.gene059420	MS.gene95112	0.84089	6.62E-58	-1.69E-46
MS.gene059455	MS.gene95112	0.814899	1.22E-51	-1.69E-46
MS.gene059536	MS.gene95112	0.828084	1.09E-54	-1.69E-46
MS.gene059688	MS.gene95112	0.858707	6.85E-63	-1.69E-46
MS.gene059692	MS.gene95112	0.837443	5.18E-57	-1.69E-46
MS.gene059695	MS.gene95112	0.836546	8.78E-57	-1.69E-46
MS.gene059711	MS.gene95112	0.801318	9.53E-49	-1.69E-46
MS.gene059718	MS.gene95112	0.81962	1.06E-52	-1.69E-46
MS.gene059807	MS.gene95112	0.808279	3.35E-50	-1.69E-46
MS.gene059902	MS.gene95112	0.853321	2.58E-61	-1.69E-46
MS.gene060403	MS.gene95112	0.840006	1.13E-57	-1.69E-46
MS.gene060804	MS.gene95112	0.843865	1.08E-58	-1.69E-46
MS.gene060818	MS.gene95112	0.837639	4.62E-57	-1.69E-46
MS.gene060835	MS.gene95112	0.869881	2.22E-66	-1.69E-46
MS.gene060837	MS.gene95112	0.863677	2.10E-64	-1.69E-46
MS.gene06092	MS.gene95112	0.826389	2.79E-54	-1.69E-46
MS.gene061041	MS.gene95112	0.820639	6.17E-53	-1.69E-46
MS.gene061154	MS.gene95112	0.865125	7.41E-65	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene95112.t1	MTR_4g133870	86.364	352	11	1	1	315	1	352	0.0	597
MS.gene95112.t1	MTR_5g095650	48.991	347	136	3	1	310	1	343	8.61e-98	292
MS.gene95112.t1	MTR_7g110600	35.417	240	149	3	71	306	136	373	2.59e-48	166
MS.gene95112.t1	MTR_5g091565	37.705	244	145	3	71	310	139	379	5.50e-48	165
MS.gene95112.t1	MTR_4g094582	35.510	245	148	5	71	310	174	413	1.82e-46	162
MS.gene95112.t1	MTR_4g133820	62.069	58	21	1	66	123	53	109	1.56e-15	72.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene95112.t1	AT5G55630	59.292	226	92	0	85	310	127	352	1.57e-92	279
MS.gene95112.t1	AT5G55630	59.292	226	92	0	85	310	127	352	1.57e-92	279
MS.gene95112.t1	AT4G18160	37.295	244	146	4	71	310	189	429	1.80e-45	160
MS.gene95112.t1	AT4G01840	33.600	250	154	3	71	310	156	403	1.34e-42	152
MS.gene95112.t1	AT5G46370	33.871	248	153	4	71	310	185	429	3.11e-42	151
MS.gene95112.t1	AT1G02510	32.174	230	132	4	69	298	72	277	1.23e-31	120
MS.gene95112.t1	AT5G46360	40.268	149	89	0	162	310	106	254	3.15e-31	118
MS.gene95112.t1	AT5G46360	38.732	142	86	1	146	286	89	230	4.58e-26	104

Find 47 sgRNAs with CRISPR-Local

Find 89 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGTTCCACGGTCACTACTTT+AGG	0.301171	8.2:-1000607	MS.gene95112:CDS
GTTATACATTGTGGAGATAA+AGG	0.305350	8.2:+1001120	None:intergenic
ATGTGCAAGGCTGAAAATTT+TGG	0.309852	8.2:-1000781	MS.gene95112:CDS
TGTATACAAGTTGAAGGAAA+TGG	0.323817	8.2:-999785	MS.gene95112:CDS
CGGTCACTACTTTAGGTTAT+GGG	0.344172	8.2:-1000600	MS.gene95112:CDS
TCACTGCTGAAATATCTTCT+TGG	0.344460	8.2:+999752	None:intergenic
AGATTACATTGTTGAGAAAC+AGG	0.387285	8.2:-1000824	MS.gene95112:CDS
ACGGTCACTACTTTAGGTTA+TGG	0.387375	8.2:-1000601	MS.gene95112:CDS
TTATACATTGTGGAGATAAA+GGG	0.395633	8.2:+1001121	None:intergenic
ATTGTGGAGATAAAGGGGTT+TGG	0.406546	8.2:+1001127	None:intergenic
GTATACAAGTTGAAGGAAAT+GGG	0.421596	8.2:-999784	MS.gene95112:CDS
CTTGAGGCAGCAGATCTTGA+TGG	0.425392	8.2:-1000409	MS.gene95112:CDS
GTCTTCACTGGCATGGCTCT+CGG	0.434853	8.2:-1000871	MS.gene95112:CDS
GTTTGTTGTATACAAGTTGA+AGG	0.439684	8.2:-999791	MS.gene95112:CDS
GCATGCATTTATGTCTTCAC+TGG	0.440926	8.2:-1000883	MS.gene95112:CDS
ATTGAGCAGCACCATTTGCT+TGG	0.490697	8.2:-1000527	MS.gene95112:CDS
AGCTATTGCTTTCAGAGTCA+AGG	0.495133	8.2:-1001260	MS.gene95112:CDS
GTGGAGATAAAGGGGTTTGG+AGG	0.501419	8.2:+1001130	None:intergenic
AAACTAGACTGTGATCAATC+AGG	0.508619	8.2:-999715	MS.gene95112:CDS
CATTTATGTCTTCACTGGCA+TGG	0.510032	8.2:-1000878	MS.gene95112:CDS
AGAAGATATTTCAGCAGTGA+TGG	0.521751	8.2:-999749	MS.gene95112:CDS
AAGAGCTTCTCGACTGCTGC+CGG	0.529816	8.2:-1000574	MS.gene95112:CDS
AAGAAGCAGAATTCAAGTTC+AGG	0.531566	8.2:-1001089	MS.gene95112:CDS
AAAAGACTGAGCCAAGCAAA+TGG	0.534462	8.2:+1000516	None:intergenic
GCGGTCTTCTTCTCTGAAGA+AGG	0.536019	8.2:+1001208	None:intergenic
ACTCTATTGTGTTTGTTCCA+CGG	0.539533	8.2:-1000620	MS.gene95112:CDS
TGTTTATCAGTTATACATTG+TGG	0.539721	8.2:+1001111	None:intergenic
TTGATGGAGACAAAGTTGTC+AGG	0.546814	8.2:-1000393	MS.gene95112:intron
GCTATTGCTTTCAGAGTCAA+GGG	0.570375	8.2:-1001259	MS.gene95112:CDS
TCTTGCTGAGTCCATGTGCA+AGG	0.575638	8.2:-1000794	MS.gene95112:CDS
ATTATCACTAAGTGATCTTG+AGG	0.579141	8.2:-1000425	MS.gene95112:CDS
TATACATTGTGGAGATAAAG+GGG	0.579592	8.2:+1001122	None:intergenic
TGAAGACATAAATGCATGCA+AGG	0.589047	8.2:+1000887	None:intergenic
TTGTGTTTAGCAGCATACCT+AGG	0.589326	8.2:-1001057	MS.gene95112:CDS
GGTCACTACTTTAGGTTATG+GGG	0.598779	8.2:-1000599	MS.gene95112:CDS
TGAAGATAGACAAAGATCAC+TGG	0.601013	8.2:-1000470	MS.gene95112:CDS
AACATAAGGTACCTGTGCCT+AGG	0.617422	8.2:+1001040	None:intergenic
AGAAGAAGACCGCGGCGTGG+CGG	0.622978	8.2:-1001198	MS.gene95112:CDS
GCTTCTCGACTGCTGCCGGT+AGG	0.626037	8.2:-1000570	MS.gene95112:CDS
TTAGCAGCATACCTAGGCAC+AGG	0.645513	8.2:-1001051	MS.gene95112:intron
TTCACTGGCATGGCTCTCGG+TGG	0.647484	8.2:-1000868	MS.gene95112:CDS
TCTGAAGTTCCGCCACGCCG+CGG	0.651177	8.2:+1001189	None:intergenic
AATCTGCAGCAAGAACAGAA+TGG	0.667031	8.2:-1001156	MS.gene95112:CDS
CAGAGAAGAAGACCGCGGCG+TGG	0.691942	8.2:-1001201	MS.gene95112:CDS
GCTGCTCAATATCCAAAACA+CGG	0.699934	8.2:+1000540	None:intergenic
ATAACCTAAAGTAGTGACCG+TGG	0.717695	8.2:+1000603	None:intergenic
TTCTTCAGAGAAGAAGACCG+CGG	0.758085	8.2:-1001206	MS.gene95112:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TAAAAAAAAATAAAATAAAA+TGG	-	chr8.2:1000792-1000811	MS.gene95112:CDS	0.0%
!!!	ATTTTTTAATTATTTTTTTT+TGG	-	chr8.2:1000903-1000922	MS.gene95112:CDS	0.0%
!!	ATAAAATGGAAATTAAAATA+AGG	-	chr8.2:1000806-1000825	MS.gene95112:CDS	10.0%
!!	AAAATTGTTGATCAATATTG+AGG	+	chr8.2:1001130-1001149	None:intergenic	20.0%
!!	TTATGAGTGAATTTGTAAAT+TGG	+	chr8.2:1000706-1000725	None:intergenic	20.0%
!!	TTTATTTATATCATTTGCAC+CGG	-	chr8.2:1001013-1001032	MS.gene95112:intron	20.0%
!	TGTTTATCAGTTATACATTG+TGG	+	chr8.2:999849-999868	None:intergenic	25.0%
!	TTATACATTGTGGAGATAAA+GGG	+	chr8.2:999839-999858	None:intergenic	25.0%
!	TTATTTATATCATTTGCACC+GGG	-	chr8.2:1001014-1001033	MS.gene95112:intron	25.0%
!!	ACTTGTTAGATAGAAACATA+AGG	+	chr8.2:999934-999953	None:intergenic	25.0%
!!	ATCACTTAGTGATAATTTTC+GGG	+	chr8.2:1000528-1000547	None:intergenic	25.0%
!!	GATCACTTAGTGATAATTTT+CGG	+	chr8.2:1000529-1000548	None:intergenic	25.0%
!!	TATTGAGAATCTAGATTTTG+TGG	-	chr8.2:1000310-1000329	MS.gene95112:intron	25.0%
	AATCATGAGCACAAAAAAAG+TGG	+	chr8.2:1000267-1000286	None:intergenic	30.0%
	AATCTCTGATTATTGCGAAT+TGG	+	chr8.2:1000654-1000673	None:intergenic	30.0%
	AGATTACATTGTTGAGAAAC+AGG	-	chr8.2:1000133-1000152	MS.gene95112:intron	30.0%
	ATTATCACTAAGTGATCTTG+AGG	-	chr8.2:1000532-1000551	MS.gene95112:CDS	30.0%
	CTAACAAGTTACCAAATTGA+GGG	-	chr8.2:999945-999964	MS.gene95112:intron	30.0%
	GCTTAGTGTAGCTAAATTAT+TGG	+	chr8.2:1001099-1001118	None:intergenic	30.0%
	GTTATACATTGTGGAGATAA+AGG	+	chr8.2:999840-999859	None:intergenic	30.0%
	TATACATTGTGGAGATAAAG+GGG	+	chr8.2:999838-999857	None:intergenic	30.0%
	TCTAACAAGTTACCAAATTG+AGG	-	chr8.2:999944-999963	MS.gene95112:intron	30.0%
	TGTCACAACACAGAAATAAA+GGG	+	chr8.2:999997-1000016	None:intergenic	30.0%
	TTGTCACAACACAGAAATAA+AGG	+	chr8.2:999998-1000017	None:intergenic	30.0%
!	GTATACAAGTTGAAGGAAAT+GGG	-	chr8.2:1001173-1001192	MS.gene95112:CDS	30.0%
!	TGTATACAAGTTGAAGGAAA+TGG	-	chr8.2:1001172-1001191	MS.gene95112:CDS	30.0%
!!	AGTTTTGCTATAGTGCTATT+TGG	+	chr8.2:1000050-1000069	None:intergenic	30.0%
!!	GTTTGTTGTATACAAGTTGA+AGG	-	chr8.2:1001166-1001185	MS.gene95112:CDS	30.0%
!!	TGAAAATTTTGGTCTACAAG+AGG	-	chr8.2:1000187-1000206	MS.gene95112:intron	30.0%
!!!	TTGTTTTTATGCCCTCAATT+TGG	+	chr8.2:999959-999978	None:intergenic	30.0%
	AAACTAGACTGTGATCAATC+AGG	-	chr8.2:1001242-1001261	MS.gene95112:CDS	35.0%
	ACAAAGATCACTGGCAAAAA+TGG	-	chr8.2:1000496-1000515	MS.gene95112:CDS	35.0%
	ACAATGACTACTGTTGGATA+TGG	-	chr8.2:1000014-1000033	MS.gene95112:intron	35.0%
	ACTCCTTTGATATGTATCGA+CGG	-	chr8.2:1000928-1000947	MS.gene95112:intron	35.0%
	ACTCTATTGTGTTTGTTCCA+CGG	-	chr8.2:1000337-1000356	MS.gene95112:intron	35.0%
	AGAAGATATTTCAGCAGTGA+TGG	-	chr8.2:1001208-1001227	MS.gene95112:CDS	35.0%
	CACTCATAAGTTATGAAGCA+CGG	-	chr8.2:1000717-1000736	MS.gene95112:CDS	35.0%
	TAAACAATCACACGTATCTG+AGG	-	chr8.2:1000836-1000855	MS.gene95112:CDS	35.0%
	TCACTGCTGAAATATCTTCT+TGG	+	chr8.2:1001208-1001227	None:intergenic	35.0%
	TGAAGACATAAATGCATGCA+AGG	+	chr8.2:1000073-1000092	None:intergenic	35.0%
	TGAAGATAGACAAAGATCAC+TGG	-	chr8.2:1000487-1000506	MS.gene95112:CDS	35.0%
!	AAAATTTTCAGCCTTGCACA+TGG	+	chr8.2:1000177-1000196	None:intergenic	35.0%
!	AAGAAGCAGAATTCAAGTTC+AGG	-	chr8.2:999868-999887	MS.gene95112:intron	35.0%
!	ATGTGCAAGGCTGAAAATTT+TGG	-	chr8.2:1000176-1000195	MS.gene95112:intron	35.0%
!!!	TTTTTTGTGCTCATGATTGC+AGG	-	chr8.2:1000269-1000288	MS.gene95112:intron	35.0%
	AAAAGACTGAGCCAAGCAAA+TGG	+	chr8.2:1000444-1000463	None:intergenic	40.0%
	AAACACGGCAAAAATCCTAC+CGG	+	chr8.2:1000405-1000424	None:intergenic	40.0%
	AATCTGCAGCAAGAACAGAA+TGG	-	chr8.2:999801-999820	MS.gene95112:CDS	40.0%
	AGCTATTGCTTTCAGAGTCA+AGG	-	chr8.2:999697-999716	MS.gene95112:CDS	40.0%
	ATAACCTAAAGTAGTGACCG+TGG	+	chr8.2:1000357-1000376	None:intergenic	40.0%
	ATTGTGGAGATAAAGGGGTT+TGG	+	chr8.2:999833-999852	None:intergenic	40.0%
	CATTTATGTCTTCACTGGCA+TGG	-	chr8.2:1000079-1000098	MS.gene95112:intron	40.0%
	GCATGCATTTATGTCTTCAC+TGG	-	chr8.2:1000074-1000093	MS.gene95112:intron	40.0%
	GCTATTGCTTTCAGAGTCAA+GGG	-	chr8.2:999698-999717	MS.gene95112:CDS	40.0%
	GCTGCTCAATATCCAAAACA+CGG	+	chr8.2:1000420-1000439	None:intergenic	40.0%
	GTATCAGATACACGTATCGA+CGG	+	chr8.2:1000751-1000770	None:intergenic	40.0%
	GTTGTGACAATGACTACTGT+TGG	-	chr8.2:1000008-1000027	MS.gene95112:intron	40.0%
	TATGATCTTACTGCATCTCC+CGG	+	chr8.2:1001035-1001054	None:intergenic	40.0%
	TCAACGCAATACTAGTGATG+AGG	+	chr8.2:1001067-1001086	None:intergenic	40.0%
	TTGATGGAGACAAAGTTGTC+AGG	-	chr8.2:1000564-1000583	MS.gene95112:CDS	40.0%
	TTGTGTTTAGCAGCATACCT+AGG	-	chr8.2:999900-999919	MS.gene95112:intron	40.0%
!	ACGGTCACTACTTTAGGTTA+TGG	-	chr8.2:1000356-1000375	MS.gene95112:intron	40.0%
!	CGGTCACTACTTTAGGTTAT+GGG	-	chr8.2:1000357-1000376	MS.gene95112:intron	40.0%
!	GGTCACTACTTTAGGTTATG+GGG	-	chr8.2:1000358-1000377	MS.gene95112:intron	40.0%
!	GTAGGATTTTTGCCGTGTTT+TGG	-	chr8.2:1000405-1000424	MS.gene95112:CDS	40.0%
	ACAACAAACTCTGCAGCACT+GGG	+	chr8.2:1001155-1001174	None:intergenic	45.0%
	ACGCCGTCGATACATATCAA+AGG	+	chr8.2:1000934-1000953	None:intergenic	45.0%
	AGCAGACACTTCACAATTGC+AGG	-	chr8.2:1000618-1000637	MS.gene95112:CDS	45.0%
	ATTGAGCAGCACCATTTGCT+TGG	-	chr8.2:1000430-1000449	MS.gene95112:CDS	45.0%
	GCAGACACTTCACAATTGCA+GGG	-	chr8.2:1000619-1000638	MS.gene95112:CDS	45.0%
	TACAACAAACTCTGCAGCAC+TGG	+	chr8.2:1001156-1001175	None:intergenic	45.0%
	TGTTCCACGGTCACTACTTT+AGG	-	chr8.2:1000350-1000369	MS.gene95112:intron	45.0%
	TTCTTCAGAGAAGAAGACCG+CGG	-	chr8.2:999751-999770	MS.gene95112:CDS	45.0%
!	AACATAAGGTACCTGTGCCT+AGG	+	chr8.2:999920-999939	None:intergenic	45.0%
	CTTGAGGCAGCAGATCTTGA+TGG	-	chr8.2:1000548-1000567	MS.gene95112:CDS	50.0%
	GTGGAGATAAAGGGGTTTGG+AGG	+	chr8.2:999830-999849	None:intergenic	50.0%
	TCTTGCTGAGTCCATGTGCA+AGG	-	chr8.2:1000163-1000182	MS.gene95112:intron	50.0%
	TTAGCAGCATACCTAGGCAC+AGG	-	chr8.2:999906-999925	MS.gene95112:intron	50.0%
!	GCGGTCTTCTTCTCTGAAGA+AGG	+	chr8.2:999752-999771	None:intergenic	50.0%
	AAGAGCTTCTCGACTGCTGC+CGG	-	chr8.2:1000383-1000402	MS.gene95112:intron	55.0%
	GTCTTCACTGGCATGGCTCT+CGG	-	chr8.2:1000086-1000105	MS.gene95112:intron	55.0%
	TTCACTGGCATGGCTCTCGG+TGG	-	chr8.2:1000089-1000108	MS.gene95112:intron	60.0%
!	CACACGTATCTGAGGCGTGC+TGG	-	chr8.2:1000844-1000863	MS.gene95112:CDS	60.0%
!	GAGACGTGTCGACGGCGTAT+CGG	-	chr8.2:1000866-1000885	MS.gene95112:CDS	60.0%
	AGAAGAAGACCGCGGCGTGG+CGG	-	chr8.2:999759-999778	MS.gene95112:CDS	65.0%
	CAGAGAAGAAGACCGCGGCG+TGG	-	chr8.2:999756-999775	MS.gene95112:CDS	65.0%
	GCGTGCTGGAGACGTGTCGA+CGG	-	chr8.2:1000858-1000877	MS.gene95112:CDS	65.0%
	GCTTCTCGACTGCTGCCGGT+AGG	-	chr8.2:1000387-1000406	MS.gene95112:intron	65.0%
!	TCTGAAGTTCCGCCACGCCG+CGG	+	chr8.2:999771-999790	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.2	gene	999675	1001304	999675	ID=MS.gene95112
chr8.2	mRNA	999675	1001304	999675	ID=MS.gene95112.t1;Parent=MS.gene95112
chr8.2	exon	1001052	1001304	1001052	ID=MS.gene95112.t1.exon1;Parent=MS.gene95112.t1
chr8.2	CDS	1001052	1001304	1001052	ID=cds.MS.gene95112.t1;Parent=MS.gene95112.t1
chr8.2	exon	1000394	1000940	1000394	ID=MS.gene95112.t1.exon2;Parent=MS.gene95112.t1
chr8.2	CDS	1000394	1000940	1000394	ID=cds.MS.gene95112.t1;Parent=MS.gene95112.t1
chr8.2	exon	999675	999822	999675	ID=MS.gene95112.t1.exon3;Parent=MS.gene95112.t1
chr8.2	CDS	999675	999822	999675	ID=cds.MS.gene95112.t1;Parent=MS.gene95112.t1

Gene Sequence

>MS.gene95112

ATGGGCAGTGATGAAGCTCAACAGCTATTGCTTTCAGAGTCAAGGGAACATTCTCATCTCAATGAGAAGAGTGACCTTCTTCAGAGAAGAAGACCGCGGCGTGGCGGAACTTCAGAGACAGATATCAATCTGCAGCAAGAACAGAATGGTGTCCTCCAAACCCCTTTATCTCCACAATGTATAACTGATAAACAAGAAGCAGAATTCAAGTTCAGGCTAGTGTTCTTGTGTTTAGCAGCATACCTAGGCACAGGTACCTTATGTTTCTATCTAACAAGTTACCAAATTGAGGGCATAAAAACAAATAATTTTCTTGATGCCCTTTATTTCTGTGTTGTGACAATGACTACTGTTGGATATGGAGATCTTGTTCCAAATAGCACTATAGCAAAACTCCTTGCATGCATTTATGTCTTCACTGGCATGGCTCTCGGTGGCTTAATTCTTAGCAAAGCAGCAGATTACATTGTTGAGAAACAGGAAATATTTCTTGCTGAGTCCATGTGCAAGGCTGAAAATTTTGGTCTACAAGAGGTTGCTAAAGAGCTTGAAACTAAGAAAAGCAAATACAAGTTTGTGCTTGCAGTAGCCACTTTTTTTGTGCTCATGATTGCAGGAACTGTTTTTCTGTATTTTATTGAGAATCTAGATTTTGTGGATGCACTCTATTGTGTTTGTTCCACGGTCACTACTTTAGGTTATGGGGATAAGAGCTTCTCGACTGCTGCCGGTAGGATTTTTGCCGTGTTTTGGATATTGAGCAGCACCATTTGCTTGGCTCAGTCTTTTGCTTATCTTGCTGAACTCTATACTGAAGATAGACAAAGATCACTGGCAAAAATGGTTCTCACCCGAAAATTATCACTAAGTGATCTTGAGGCAGCAGATCTTGATGGAGACAAAGTTGTCAGGTACTAAAATACACTAACAGATGAACTATTTTAGCAGACACTTCACAATTGCAGGGATATATTTTCCAATTCGCAATAATCAGAGATTATTTTGACTGATGCTTATAATTTCGAGAACCAATTTACAAATTCACTCATAAGTTATGAAGCACGGACACGATACCGTCGATACGTGTATCTGATACGATACGTTTAAGATACATTTATAAAAAAAAATAAAATAAAATGGAAATTAAAATAAGGAGAGAGCTAAACAATCACACGTATCTGAGGCGTGCTGGAGACGTGTCGACGGCGTATCGGAATTTTTTATTTTTATTTTTTAATTATTTTTTTTTGGATACTCCTTTGATATGTATCGACGGCGTATCAGATACGTATCAGTGCTTCATAGTGCTAAGCTTATATTATAAATGTATTTACTCTTTTTATTTATATCATTTGCACCGGGAGATGCAGTAAGATCATATTTATAACACCTCATCACTAGTATTGCGTTGATAAATTGCTCCAATAATTTAGCTACACTAAGCAATTAAATCCTCAATATTGATCAACAATTTTTTCCCAGTGCTGCAGAGTTTGTTGTATACAAGTTGAAGGAAATGGGAAAGATCAACCAAGAAGATATTTCAGCAGTGATGGAGAGTTTTAGAAAACTAGACTGTGATCAATCAGGAACTCTGACTGAAGCTGATATCAGAAATTTTGAATTCTGA

Protein sequence

>MS.gene95112.t1

MGSDEAQQLLLSESREHSHLNEKSDLLQRRRPRRGGTSETDINLQQEQNGVLQTPLSPQCITDKQEAEFKFRLVFLCLAAYLGTDLVPNSTIAKLLACIYVFTGMALGGLILSKAADYIVEKQEIFLAESMCKAENFGLQEVAKELETKKSKYKFVLAVATFFVLMIAGTVFLYFIENLDFVDALYCVCSTVTTLGYGDKSFSTAAGRIFAVFWILSSTICLAQSFAYLAELYTEDRQRSLAKMVLTRKLSLSDLEAADLDGDKVVSAAEFVVYKLKEMGKINQEDISAVMESFRKLDCDQSGTLTEADIRNFEF