Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97344.t1 | XP_013470484.1 | 97.1 | 682 | 20 | 0 | 1 | 682 | 1 | 682 | 0.00E+00 | 1240.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97344.t1 | A0A072VRW6 | 97.1 | 682 | 20 | 0 | 1 | 682 | 1 | 682 | 0.0e+00 | 1240.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene97344 | 0.869728 | 2.49E-66 | -1.69E-46 |
| MS.gene049159 | MS.gene97344 | 0.824705 | 6.98E-54 | -1.69E-46 |
| MS.gene049254 | MS.gene97344 | 0.856462 | 3.16E-62 | -1.69E-46 |
| MS.gene049272 | MS.gene97344 | 0.811107 | 8.26E-51 | -1.69E-46 |
| MS.gene049343 | MS.gene97344 | 0.805929 | 1.05E-49 | -1.69E-46 |
| MS.gene049404 | MS.gene97344 | 0.800666 | 1.30E-48 | -1.69E-46 |
| MS.gene049435 | MS.gene97344 | 0.813433 | 2.57E-51 | -1.69E-46 |
| MS.gene049452 | MS.gene97344 | 0.805754 | 1.15E-49 | -1.69E-46 |
| MS.gene049501 | MS.gene97344 | 0.824939 | 6.15E-54 | -1.69E-46 |
| MS.gene049567 | MS.gene97344 | 0.831195 | 1.92E-55 | -1.69E-46 |
| MS.gene049585 | MS.gene97344 | 0.814054 | 1.87E-51 | -1.69E-46 |
| MS.gene049711 | MS.gene97344 | 0.82797 | 1.17E-54 | -1.69E-46 |
| MS.gene049807 | MS.gene97344 | 0.820082 | 8.28E-53 | -1.69E-46 |
| MS.gene049850 | MS.gene97344 | 0.853308 | 2.60E-61 | -1.69E-46 |
| MS.gene049983 | MS.gene97344 | 0.803242 | 3.83E-49 | -1.69E-46 |
| MS.gene050026 | MS.gene97344 | 0.80899 | 2.36E-50 | -1.69E-46 |
| MS.gene050156 | MS.gene97344 | 0.824666 | 7.13E-54 | -1.69E-46 |
| MS.gene050442 | MS.gene97344 | 0.839369 | 1.65E-57 | -1.69E-46 |
| MS.gene05045 | MS.gene97344 | 0.811493 | 6.81E-51 | -1.69E-46 |
| MS.gene050559 | MS.gene97344 | 0.822452 | 2.35E-53 | -1.69E-46 |
| MS.gene050561 | MS.gene97344 | 0.830773 | 2.43E-55 | -1.69E-46 |
| MS.gene050562 | MS.gene97344 | 0.815981 | 7.00E-52 | -1.69E-46 |
| MS.gene050657 | MS.gene97344 | 0.806168 | 9.38E-50 | -1.69E-46 |
| MS.gene050719 | MS.gene97344 | 0.833637 | 4.76E-56 | -1.69E-46 |
| MS.gene050721 | MS.gene97344 | 0.831963 | 1.24E-55 | -1.69E-46 |
| MS.gene050724 | MS.gene97344 | 0.828303 | 9.69E-55 | -1.69E-46 |
| MS.gene050759 | MS.gene97344 | 0.804479 | 2.12E-49 | -1.69E-46 |
| MS.gene050780 | MS.gene97344 | 0.822402 | 2.42E-53 | -1.69E-46 |
| MS.gene050844 | MS.gene97344 | 0.829065 | 6.34E-55 | -1.69E-46 |
| MS.gene051181 | MS.gene97344 | 0.801927 | 7.15E-49 | -1.69E-46 |
| MS.gene051198 | MS.gene97344 | 0.822671 | 2.09E-53 | -1.69E-46 |
| MS.gene051247 | MS.gene97344 | 0.839083 | 1.96E-57 | -1.69E-46 |
| MS.gene051279 | MS.gene97344 | 0.808369 | 3.20E-50 | -1.69E-46 |
| MS.gene051388 | MS.gene97344 | 0.811129 | 8.17E-51 | -1.69E-46 |
| MS.gene051490 | MS.gene97344 | 0.824539 | 7.64E-54 | -1.69E-46 |
| MS.gene05157 | MS.gene97344 | 0.815345 | 9.69E-52 | -1.69E-46 |
| MS.gene051710 | MS.gene97344 | 0.801247 | 9.85E-49 | -1.69E-46 |
| MS.gene051719 | MS.gene97344 | 0.827543 | 1.48E-54 | -1.69E-46 |
| MS.gene051720 | MS.gene97344 | 0.814605 | 1.41E-51 | -1.69E-46 |
| MS.gene051744 | MS.gene97344 | 0.906352 | 1.63E-80 | -1.69E-46 |
| MS.gene051800 | MS.gene97344 | 0.828854 | 7.13E-55 | -1.69E-46 |
| MS.gene051957 | MS.gene97344 | 0.805669 | 1.19E-49 | -1.69E-46 |
| MS.gene052020 | MS.gene97344 | 0.838596 | 2.62E-57 | -1.69E-46 |
| MS.gene052037 | MS.gene97344 | 0.812174 | 4.84E-51 | -1.69E-46 |
| MS.gene052042 | MS.gene97344 | 0.818352 | 2.05E-52 | -1.69E-46 |
| MS.gene052208 | MS.gene97344 | 0.806547 | 7.80E-50 | -1.69E-46 |
| MS.gene052307 | MS.gene97344 | 0.822389 | 2.43E-53 | -1.69E-46 |
| MS.gene052311 | MS.gene97344 | 0.805166 | 1.52E-49 | -1.69E-46 |
| MS.gene052323 | MS.gene97344 | 0.811015 | 8.65E-51 | -1.69E-46 |
| MS.gene052463 | MS.gene97344 | 0.822721 | 2.04E-53 | -1.69E-46 |
| MS.gene052516 | MS.gene97344 | 0.851556 | 8.22E-61 | -1.69E-46 |
| MS.gene052519 | MS.gene97344 | 0.837459 | 5.13E-57 | -1.69E-46 |
| MS.gene052582 | MS.gene97344 | 0.823721 | 1.19E-53 | -1.69E-46 |
| MS.gene052584 | MS.gene97344 | 0.821203 | 4.57E-53 | -1.69E-46 |
| MS.gene052609 | MS.gene97344 | 0.822573 | 2.20E-53 | -1.69E-46 |
| MS.gene052611 | MS.gene97344 | 0.838189 | 3.33E-57 | -1.69E-46 |
| MS.gene052773 | MS.gene97344 | 0.852172 | 5.50E-61 | -1.69E-46 |
| MS.gene052863 | MS.gene97344 | 0.848023 | 7.98E-60 | -1.69E-46 |
| MS.gene052896 | MS.gene97344 | 0.837582 | 4.78E-57 | -1.69E-46 |
| MS.gene053079 | MS.gene97344 | 0.825938 | 3.57E-54 | -1.69E-46 |
| MS.gene053144 | MS.gene97344 | 0.834164 | 3.51E-56 | -1.69E-46 |
| MS.gene053226 | MS.gene97344 | 0.854417 | 1.25E-61 | -1.69E-46 |
| MS.gene053296 | MS.gene97344 | 0.813076 | 3.07E-51 | -1.69E-46 |
| MS.gene05350 | MS.gene97344 | 0.817624 | 2.99E-52 | -1.69E-46 |
| MS.gene053621 | MS.gene97344 | 0.82842 | 9.08E-55 | -1.69E-46 |
| MS.gene053647 | MS.gene97344 | 0.801147 | 1.03E-48 | -1.69E-46 |
| MS.gene053966 | MS.gene97344 | 0.824204 | 9.16E-54 | -1.69E-46 |
| MS.gene053998 | MS.gene97344 | 0.81872 | 1.69E-52 | -1.69E-46 |
| MS.gene05414 | MS.gene97344 | 0.809332 | 1.99E-50 | -1.69E-46 |
| MS.gene05415 | MS.gene97344 | 0.813254 | 2.81E-51 | -1.69E-46 |
| MS.gene05417 | MS.gene97344 | 0.801129 | 1.04E-48 | -1.69E-46 |
| MS.gene054236 | MS.gene97344 | 0.825312 | 5.02E-54 | -1.69E-46 |
| MS.gene05423 | MS.gene97344 | 0.822932 | 1.82E-53 | -1.69E-46 |
| MS.gene054467 | MS.gene97344 | 0.827856 | 1.24E-54 | -1.69E-46 |
| MS.gene054468 | MS.gene97344 | 0.812768 | 3.59E-51 | -1.69E-46 |
| MS.gene054472 | MS.gene97344 | 0.800187 | 1.62E-48 | -1.69E-46 |
| MS.gene054576 | MS.gene97344 | 0.824828 | 6.53E-54 | -1.69E-46 |
| MS.gene054584 | MS.gene97344 | 0.833239 | 5.98E-56 | -1.69E-46 |
| MS.gene05458 | MS.gene97344 | 0.805746 | 1.15E-49 | -1.69E-46 |
| MS.gene05462 | MS.gene97344 | 0.800825 | 1.20E-48 | -1.69E-46 |
| MS.gene054651 | MS.gene97344 | 0.847844 | 8.94E-60 | -1.69E-46 |
| MS.gene054775 | MS.gene97344 | 0.814354 | 1.61E-51 | -1.69E-46 |
| MS.gene054943 | MS.gene97344 | 0.80078 | 1.23E-48 | -1.69E-46 |
| MS.gene055227 | MS.gene97344 | 0.815112 | 1.09E-51 | -1.69E-46 |
| MS.gene055465 | MS.gene97344 | 0.819858 | 9.31E-53 | -1.69E-46 |
| MS.gene055466 | MS.gene97344 | 0.833056 | 6.64E-56 | -1.69E-46 |
| MS.gene055468 | MS.gene97344 | 0.808998 | 2.35E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene97344 | 0.830192 | 3.37E-55 | -1.69E-46 |
| MS.gene055586 | MS.gene97344 | 0.807819 | 4.19E-50 | -1.69E-46 |
| MS.gene055778 | MS.gene97344 | 0.825277 | 5.12E-54 | -1.69E-46 |
| MS.gene055818 | MS.gene97344 | 0.872569 | 2.87E-67 | -1.69E-46 |
| MS.gene055864 | MS.gene97344 | 0.8226 | 2.17E-53 | -1.69E-46 |
| MS.gene055926 | MS.gene97344 | 0.821815 | 3.30E-53 | -1.69E-46 |
| MS.gene05604 | MS.gene97344 | 0.806616 | 7.55E-50 | -1.69E-46 |
| MS.gene056050 | MS.gene97344 | 0.847228 | 1.32E-59 | -1.69E-46 |
| MS.gene056162 | MS.gene97344 | 0.800367 | 1.49E-48 | -1.69E-46 |
| MS.gene056173 | MS.gene97344 | 0.802856 | 4.60E-49 | -1.69E-46 |
| MS.gene056174 | MS.gene97344 | 0.848989 | 4.31E-60 | -1.69E-46 |
| MS.gene056308 | MS.gene97344 | 0.828919 | 6.88E-55 | -1.69E-46 |
| MS.gene056366 | MS.gene97344 | 0.826643 | 2.42E-54 | -1.69E-46 |
| MS.gene056373 | MS.gene97344 | 0.823243 | 1.54E-53 | -1.69E-46 |
| MS.gene056424 | MS.gene97344 | 0.803358 | 3.62E-49 | -1.69E-46 |
| MS.gene056506 | MS.gene97344 | 0.81327 | 2.79E-51 | -1.69E-46 |
| MS.gene056507 | MS.gene97344 | 0.832184 | 1.09E-55 | -1.69E-46 |
| MS.gene056553 | MS.gene97344 | 0.813859 | 2.07E-51 | -1.69E-46 |
| MS.gene056595 | MS.gene97344 | 0.804031 | 2.63E-49 | -1.69E-46 |
| MS.gene056699 | MS.gene97344 | 0.842594 | 2.35E-58 | -1.69E-46 |
| MS.gene05686 | MS.gene97344 | 0.839167 | 1.86E-57 | -1.69E-46 |
| MS.gene05690 | MS.gene97344 | 0.815186 | 1.05E-51 | -1.69E-46 |
| MS.gene057026 | MS.gene97344 | 0.837361 | 5.44E-57 | -1.69E-46 |
| MS.gene057034 | MS.gene97344 | 0.843676 | 1.21E-58 | -1.69E-46 |
| MS.gene057314 | MS.gene97344 | 0.817526 | 3.15E-52 | -1.69E-46 |
| MS.gene057360 | MS.gene97344 | 0.806998 | 6.26E-50 | -1.69E-46 |
| MS.gene057444 | MS.gene97344 | 0.812738 | 3.65E-51 | -1.69E-46 |
| MS.gene057598 | MS.gene97344 | 0.82382 | 1.13E-53 | -1.69E-46 |
| MS.gene057855 | MS.gene97344 | 0.819485 | 1.13E-52 | -1.69E-46 |
| MS.gene057869 | MS.gene97344 | 0.822471 | 2.33E-53 | -1.69E-46 |
| MS.gene057915 | MS.gene97344 | 0.874797 | 5.10E-68 | -1.69E-46 |
| MS.gene058009 | MS.gene97344 | 0.810836 | 9.46E-51 | -1.69E-46 |
| MS.gene058010 | MS.gene97344 | 0.856252 | 3.65E-62 | -1.69E-46 |
| MS.gene058037 | MS.gene97344 | 0.811581 | 6.52E-51 | -1.69E-46 |
| MS.gene058289 | MS.gene97344 | 0.82101 | 5.07E-53 | -1.69E-46 |
| MS.gene058477 | MS.gene97344 | 0.807812 | 4.21E-50 | -1.69E-46 |
| MS.gene05847 | MS.gene97344 | 0.806803 | 6.89E-50 | -1.69E-46 |
| MS.gene058625 | MS.gene97344 | 0.858287 | 9.14E-63 | -1.69E-46 |
| MS.gene058829 | MS.gene97344 | 0.810432 | 1.16E-50 | -1.69E-46 |
| MS.gene058919 | MS.gene97344 | 0.80638 | 8.46E-50 | -1.69E-46 |
| MS.gene058979 | MS.gene97344 | 0.854346 | 1.31E-61 | -1.69E-46 |
| MS.gene059015 | MS.gene97344 | 0.820686 | 6.02E-53 | -1.69E-46 |
| MS.gene059272 | MS.gene97344 | 0.80792 | 3.99E-50 | -1.69E-46 |
| MS.gene059283 | MS.gene97344 | 0.822152 | 2.76E-53 | -1.69E-46 |
| MS.gene059439 | MS.gene97344 | 0.809213 | 2.11E-50 | -1.69E-46 |
| MS.gene059570 | MS.gene97344 | 0.866602 | 2.53E-65 | -1.69E-46 |
| MS.gene059625 | MS.gene97344 | 0.828725 | 7.66E-55 | -1.69E-46 |
| MS.gene059634 | MS.gene97344 | 0.804949 | 1.69E-49 | -1.69E-46 |
| MS.gene059725 | MS.gene97344 | 0.800532 | 1.38E-48 | -1.69E-46 |
| MS.gene059774 | MS.gene97344 | 0.81494 | 1.19E-51 | -1.69E-46 |
| MS.gene059842 | MS.gene97344 | 0.807695 | 4.46E-50 | -1.69E-46 |
| MS.gene059965 | MS.gene97344 | 0.83071 | 2.52E-55 | -1.69E-46 |
| MS.gene060167 | MS.gene97344 | 0.812129 | 4.95E-51 | -1.69E-46 |
| MS.gene060312 | MS.gene97344 | 0.81331 | 2.73E-51 | -1.69E-46 |
| MS.gene060322 | MS.gene97344 | 0.823043 | 1.71E-53 | -1.69E-46 |
| MS.gene060373 | MS.gene97344 | 0.818371 | 2.03E-52 | -1.69E-46 |
| MS.gene06052 | MS.gene97344 | 0.830143 | 3.47E-55 | -1.69E-46 |
| MS.gene060637 | MS.gene97344 | 0.821469 | 3.97E-53 | -1.69E-46 |
| MS.gene060697 | MS.gene97344 | 0.815497 | 8.97E-52 | -1.69E-46 |
| MS.gene060803 | MS.gene97344 | 0.805894 | 1.07E-49 | -1.69E-46 |
| MS.gene060840 | MS.gene97344 | 0.806865 | 6.68E-50 | -1.69E-46 |
| MS.gene060935 | MS.gene97344 | 0.805675 | 1.19E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97344.t1 | MTR_1g115610 | 98.387 | 682 | 11 | 0 | 1 | 682 | 1 | 682 | 0.0 | 1368 |
| MS.gene97344.t1 | MTR_1g115610 | 97.727 | 528 | 12 | 0 | 155 | 682 | 93 | 620 | 0.0 | 1046 |
| MS.gene97344.t1 | MTR_1g115610 | 98.235 | 510 | 9 | 0 | 173 | 682 | 1 | 510 | 0.0 | 1021 |
| MS.gene97344.t1 | MTR_1g115610 | 98.406 | 502 | 8 | 0 | 1 | 502 | 1 | 502 | 0.0 | 1004 |
| MS.gene97344.t1 | MTR_1g115610 | 98.330 | 479 | 8 | 0 | 1 | 479 | 1 | 479 | 0.0 | 954 |
| MS.gene97344.t1 | MTR_1g115610 | 97.414 | 348 | 9 | 0 | 155 | 502 | 227 | 574 | 0.0 | 683 |
| MS.gene97344.t1 | MTR_1g115610 | 98.726 | 157 | 2 | 0 | 1 | 157 | 1 | 157 | 1.46e-102 | 325 |
| MS.gene97344.t1 | MTR_1g067400 | 48.373 | 676 | 320 | 10 | 3 | 675 | 2 | 651 | 0.0 | 567 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97344.t1 | AT5G13560 | 60.058 | 686 | 253 | 7 | 3 | 676 | 2 | 678 | 0.0 | 780 |
| MS.gene97344.t1 | AT2G37370 | 50.585 | 684 | 316 | 7 | 3 | 681 | 2 | 668 | 0.0 | 608 |
| MS.gene97344.t1 | AT2G37370 | 50.585 | 684 | 316 | 7 | 3 | 681 | 2 | 668 | 0.0 | 608 |
| MS.gene97344.t1 | AT2G37370 | 50.585 | 684 | 316 | 7 | 3 | 681 | 2 | 668 | 0.0 | 608 |
| MS.gene97344.t1 | AT2G37370 | 54.135 | 532 | 238 | 3 | 3 | 534 | 2 | 527 | 0.0 | 528 |
Find 130 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTATAGGCTTTGTCTTAC+TGG | 0.137879 | 1.2:-85829101 | MS.gene97344:intron |
| CCCTTCTCCTGGAGATGTTT+GGG | 0.212578 | 1.2:-85829335 | MS.gene97344:intron |
| CTTTATTATGATTCTGATAT+TGG | 0.221062 | 1.2:-85830251 | MS.gene97344:CDS |
| AATGCGATCATGAAGGATTT+TGG | 0.222308 | 1.2:+85831563 | None:intergenic |
| CCTTGCTGTTGAAGATATTA+AGG | 0.258689 | 1.2:-85831172 | MS.gene97344:CDS |
| TCCCTTCTCCTGGAGATGTT+TGG | 0.263141 | 1.2:-85829336 | MS.gene97344:CDS |
| CAAAACGTGGATCAACTTTC+TGG | 0.265233 | 1.2:-85822230 | MS.gene97344:CDS |
| GAATCCACAGAGACCTTCTT+TGG | 0.276603 | 1.2:-85831148 | MS.gene97344:intron |
| GTTGTAGGTTAATACTTCTT+TGG | 0.286653 | 1.2:-85822508 | MS.gene97344:intron |
| GATTTGAGTGAAGGTGATTT+TGG | 0.288162 | 1.2:+85819964 | None:intergenic |
| TCTTGAAGCTGAACTGAAAA+AGG | 0.292038 | 1.2:-85823603 | MS.gene97344:intron |
| AGTAAGCAGCTTACAAGATT+TGG | 0.297153 | 1.2:-85829054 | MS.gene97344:CDS |
| GCCAAGCTTGAATCTGAGTT+TGG | 0.308709 | 1.2:-85819910 | MS.gene97344:CDS |
| CTCAACAGGGAAATATTTCC+AGG | 0.314692 | 1.2:-85820474 | MS.gene97344:intron |
| TCACAACAAATGTTCCAATA+TGG | 0.319869 | 1.2:+85821217 | None:intergenic |
| TCTCATTACCTTGGCTTCAT+AGG | 0.340227 | 1.2:+85820853 | None:intergenic |
| GAGCCTTGTATTAACCATAT+TGG | 0.343181 | 1.2:-85821231 | MS.gene97344:CDS |
| CTGAGAGAGTTCAGTTGCTT+AGG | 0.366068 | 1.2:-85831275 | MS.gene97344:CDS |
| AGGGAAACCTCTTCCTCGTT+TGG | 0.366803 | 1.2:+85829354 | None:intergenic |
| GCTTGGCTAATTCAGCTTCA+TGG | 0.372198 | 1.2:+85819926 | None:intergenic |
| ATGCTGAAGCCTCTAGTCTT+AGG | 0.373993 | 1.2:-85827849 | MS.gene97344:CDS |
| TCAACTTTCTGGAAGATACT+TGG | 0.382032 | 1.2:-85822219 | MS.gene97344:CDS |
| ATCTTGTAAGCTGCTTACTA+TGG | 0.382980 | 1.2:+85829058 | None:intergenic |
| AAAACATCGCGAAAATTTAG+TGG | 0.389484 | 1.2:+85830221 | None:intergenic |
| AAATTTCTGTATTTGACTGC+TGG | 0.391944 | 1.2:+85822191 | None:intergenic |
| TGAGAATTTGTCGGGAGCTT+CGG | 0.392252 | 1.2:-85831226 | MS.gene97344:CDS |
| AGTTGAGCATCTGAAGATAA+AGG | 0.396507 | 1.2:-85822415 | MS.gene97344:intron |
| GATTGTTTGCTTCCTCAAAC+TGG | 0.403188 | 1.2:+85822442 | None:intergenic |
| CAACAGAGGAAATTAATGAT+TGG | 0.407683 | 1.2:-85819864 | MS.gene97344:CDS |
| TCACCTTCTGCTTCAGTTGG+AGG | 0.409354 | 1.2:-85820021 | MS.gene97344:CDS |
| CCTATAGGCTTTGTCTTACT+GGG | 0.415841 | 1.2:-85829100 | MS.gene97344:intron |
| GACCTCGACGGCTTTGTTGA+CGG | 0.422835 | 1.2:+85831671 | None:intergenic |
| CCTTCACCTTCTGCTTCAGT+TGG | 0.429537 | 1.2:-85820024 | MS.gene97344:CDS |
| GCCTTCAGCAACGGCTTGAC+CGG | 0.436205 | 1.2:+85831587 | None:intergenic |
| AACAGAGGAAATTAATGATT+GGG | 0.436246 | 1.2:-85819863 | MS.gene97344:CDS |
| TTTGCACAACGTGCCATCAC+TGG | 0.440668 | 1.2:-85828660 | MS.gene97344:CDS |
| TGCACAGACAGTTAAAAGAT+TGG | 0.442960 | 1.2:-85831325 | MS.gene97344:CDS |
| CAGCAATAATCCTTCCAGTC+TGG | 0.447710 | 1.2:+85826873 | None:intergenic |
| AAAGAGATTGAGAATTTGTC+GGG | 0.449006 | 1.2:-85831234 | MS.gene97344:CDS |
| GGAAGAGGTTTCCCTTCTCC+TGG | 0.453671 | 1.2:-85829346 | MS.gene97344:CDS |
| TCCTTACCAGTACTTCATCT+TGG | 0.453824 | 1.2:+85829012 | None:intergenic |
| GGGCTCTCTATTTCAAGAAC+TGG | 0.470284 | 1.2:+85820096 | None:intergenic |
| TACAGAAATTTATGAGAAGC+AGG | 0.470345 | 1.2:-85822179 | MS.gene97344:CDS |
| GTGACTAAAGGTGGTGAAAC+TGG | 0.471373 | 1.2:-85824457 | MS.gene97344:CDS |
| CTAAGCAACTGAACTCTCTC+AGG | 0.473370 | 1.2:+85831276 | None:intergenic |
| GCCGGTCAAGCCGTTGCTGA+AGG | 0.474065 | 1.2:-85831588 | MS.gene97344:CDS |
| TCCTGAGGTTCATGCCCAAA+AGG | 0.476205 | 1.2:-85826821 | MS.gene97344:intron |
| TGACAAGCTGAAGGTCTTAA+CGG | 0.478018 | 1.2:-85826148 | MS.gene97344:CDS |
| AAATTTATGAGAAGCAGGTC+AGG | 0.484747 | 1.2:-85822174 | MS.gene97344:intron |
| TATTATGATTCTGATATTGG+AGG | 0.487783 | 1.2:-85830248 | MS.gene97344:CDS |
| CAACTTTCTGGAAGATACTT+GGG | 0.487980 | 1.2:-85822218 | MS.gene97344:CDS |
| TAAAGAGATTGAGAATTTGT+CGG | 0.489122 | 1.2:-85831235 | MS.gene97344:CDS |
| TATTACCACTTTCAGTGTAG+TGG | 0.493198 | 1.2:-85820521 | MS.gene97344:CDS |
| TCCAAACTCAGATTCAAGCT+TGG | 0.493581 | 1.2:+85819909 | None:intergenic |
| ACTCAAATCAGATCAGGTAT+TGG | 0.495936 | 1.2:-85819950 | MS.gene97344:CDS |
| ACCTTCACTCAAATCAGATC+AGG | 0.497789 | 1.2:-85819956 | MS.gene97344:CDS |
| TTAAAAGTTCGCGTGACTAA+AGG | 0.500180 | 1.2:-85824469 | MS.gene97344:CDS |
| GAGTTCAGTTGCTTAGGAGA+TGG | 0.504417 | 1.2:-85831269 | MS.gene97344:CDS |
| GGAAAGTTTCTAACCAAAGA+AGG | 0.507071 | 1.2:+85831135 | None:intergenic |
| AGGTGGTGAAACTGGTGAAA+AGG | 0.507701 | 1.2:-85824449 | MS.gene97344:CDS |
| TGAAGCTCCAAACGAGGAAG+AGG | 0.509005 | 1.2:-85829361 | MS.gene97344:CDS |
| TCTTCCTCAAGATTTCTCCT+TGG | 0.509071 | 1.2:+85820884 | None:intergenic |
| AAAAGCGTATTTCTGACAAC+AGG | 0.513459 | 1.2:-85826095 | MS.gene97344:intron |
| GATTAGAATTTGTTCCAGAC+TGG | 0.514478 | 1.2:-85826887 | MS.gene97344:CDS |
| AAGCTACCAAGATGAAGTAC+TGG | 0.518951 | 1.2:-85829018 | MS.gene97344:intron |
| TTGTCGGGAGCTTCGGCTGA+AGG | 0.519241 | 1.2:-85831219 | MS.gene97344:CDS |
| GGAGGGTATAACACTATCAA+TGG | 0.520798 | 1.2:-85830180 | MS.gene97344:intron |
| ACCTCTGAGTCAAATTCTTG+AGG | 0.526194 | 1.2:+85821193 | None:intergenic |
| CTGCTGCTCAAGCACGATTG+TGG | 0.526248 | 1.2:-85822485 | MS.gene97344:CDS |
| GGAAGAGAGAGACCAGTTTG+AGG | 0.527497 | 1.2:-85822454 | MS.gene97344:CDS |
| CAGTGAGATAACAACTTCAC+AGG | 0.527733 | 1.2:-85827818 | MS.gene97344:CDS |
| TCAGCTTCTTACTACTTACC+AGG | 0.534463 | 1.2:-85821380 | MS.gene97344:intron |
| GTTATCCACTACACTGAAAG+TGG | 0.538687 | 1.2:+85820516 | None:intergenic |
| AGAATTTGTTCCAGACTGGA+AGG | 0.543034 | 1.2:-85826883 | MS.gene97344:CDS |
| AGACTCACCCAAACATCTCC+AGG | 0.544973 | 1.2:+85829328 | None:intergenic |
| ATGTTTCAGTCTTCACAGGT+GGG | 0.545766 | 1.2:+85820076 | None:intergenic |
| TTGCACAACGTGCCATCACT+GGG | 0.552720 | 1.2:-85828659 | MS.gene97344:CDS |
| TGAATCCTCAGTATCTGCAC+TGG | 0.552752 | 1.2:+85820919 | None:intergenic |
| GGTAATGTTTCAGTCTTCAC+AGG | 0.553096 | 1.2:+85820072 | None:intergenic |
| AATTTACAATGCGATCATGA+AGG | 0.555854 | 1.2:+85831556 | None:intergenic |
| CCCAAACATCTCCAGGAGAA+GGG | 0.556829 | 1.2:+85829335 | None:intergenic |
| GTAAGTAGTAAGAAGCTGAA+TGG | 0.557069 | 1.2:+85821384 | None:intergenic |
| CAGGCTTTAAAAGTTGCACT+CGG | 0.560691 | 1.2:-85826913 | MS.gene97344:CDS |
| GCTTGAATCTGAGTTTGGAA+AGG | 0.561070 | 1.2:-85819905 | MS.gene97344:CDS |
| ACCCAAACATCTCCAGGAGA+AGG | 0.564495 | 1.2:+85829334 | None:intergenic |
| GTCAACAAAGCCGTCGAGGT+CGG | 0.568463 | 1.2:-85831669 | MS.gene97344:CDS |
| TCTTCAAAGTCAGGCACTGG+AGG | 0.570285 | 1.2:-85830198 | MS.gene97344:CDS |
| ATTCACAAGTATTAAGTCCA+AGG | 0.573750 | 1.2:-85820901 | MS.gene97344:CDS |
| AGCACGATTGTGGAACGTGA+GGG | 0.577368 | 1.2:-85822475 | MS.gene97344:CDS |
| AATGTTTCAGTCTTCACAGG+TGG | 0.579834 | 1.2:+85820075 | None:intergenic |
| CTTCAAAGTCAGGCACTGGA+GGG | 0.580760 | 1.2:-85830197 | MS.gene97344:CDS |
| TAAATAGGTTGACAAGCTGA+AGG | 0.582137 | 1.2:-85826157 | MS.gene97344:intron |
| GGCTTGTTGAACGACGGTGT+CGG | 0.584473 | 1.2:+85831608 | None:intergenic |
| GGAAACAGAAGCAACCCTAC+AGG | 0.586700 | 1.2:-85827761 | MS.gene97344:intron |
| GTTCTTGTTGCCGACCTCGA+CGG | 0.591608 | 1.2:+85831659 | None:intergenic |
| TGTCTCTGTCTTTGAAAACT+CGG | 0.592272 | 1.2:+85819996 | None:intergenic |
| GAGCTTCTTCCTAAGACTAG+AGG | 0.596775 | 1.2:+85827840 | None:intergenic |
| TACAACAGAACACACCTGTA+GGG | 0.597918 | 1.2:+85827747 | None:intergenic |
| AAATCAATTCTGATCTCGCA+AGG | 0.602182 | 1.2:-85828632 | MS.gene97344:intron |
| AAAGTTCGCGTGACTAAAGG+TGG | 0.602456 | 1.2:-85824466 | MS.gene97344:CDS |
| GGATCTTAGCCACGATGACA+TGG | 0.603066 | 1.2:+85831695 | None:intergenic |
| AAGTCCAAGGAGAAATCTTG+AGG | 0.609204 | 1.2:-85820888 | MS.gene97344:CDS |
| CCTTAATATCTTCAACAGCA+AGG | 0.610486 | 1.2:+85831172 | None:intergenic |
| GTTCCAATATGGTTAATACA+AGG | 0.611572 | 1.2:+85821228 | None:intergenic |
| CGCCGTCAACAAAGCCGTCG+AGG | 0.612660 | 1.2:-85831673 | MS.gene97344:CDS |
| ACCTGATCTGATTTGAGTGA+AGG | 0.615572 | 1.2:+85819955 | None:intergenic |
| ATATTTGACCTATGAAGCCA+AGG | 0.617510 | 1.2:-85820861 | MS.gene97344:intron |
| GTACCTCCAACTGAAGCAGA+AGG | 0.621842 | 1.2:+85820018 | None:intergenic |
| ACCTCAAGAATTTGACTCAG+AGG | 0.624174 | 1.2:-85821194 | MS.gene97344:intron |
| GACACCGTCGTTCAACAAGC+CGG | 0.625021 | 1.2:-85831606 | MS.gene97344:CDS |
| AATTGATTATAAAGCTGCTG+AGG | 0.625723 | 1.2:-85827782 | MS.gene97344:CDS |
| AAGCACGATTGTGGAACGTG+AGG | 0.636747 | 1.2:-85822476 | MS.gene97344:CDS |
| CCAACTGAAGCAGAAGGTGA+AGG | 0.636940 | 1.2:+85820024 | None:intergenic |
| TGAAACTGGTGAAAAGGAGA+AGG | 0.639219 | 1.2:-85824443 | MS.gene97344:intron |
| GACAACCAGTGCAGATACTG+AGG | 0.645584 | 1.2:-85820924 | MS.gene97344:CDS |
| TTGACCGGCTTGTTGAACGA+CGG | 0.661518 | 1.2:+85831602 | None:intergenic |
| CTAACCAAAGAAGGTCTCTG+TGG | 0.664488 | 1.2:+85831144 | None:intergenic |
| AGTGAGATAACAACTTCACA+GGG | 0.666818 | 1.2:-85827817 | MS.gene97344:CDS |
| TGTTTGTCTACAGAAAGAGT+TGG | 0.668783 | 1.2:-85821253 | MS.gene97344:intron |
| GATTATTGAAGCTCCAAACG+AGG | 0.672469 | 1.2:-85829367 | MS.gene97344:CDS |
| CTCGACGGCTTTGTTGACGG+CGG | 0.681932 | 1.2:+85831674 | None:intergenic |
| TGTTCTTTAGGTGAAGCGAG+AGG | 0.683211 | 1.2:-85828694 | MS.gene97344:intron |
| TACTCAAGATTACTCAACAG+AGG | 0.683783 | 1.2:-85819878 | MS.gene97344:CDS |
| AAGCAATGGAGACTCTCCTG+AGG | 0.710271 | 1.2:-85826836 | MS.gene97344:CDS |
| AATCAGATGTCATCAAAACG+TGG | 0.712961 | 1.2:-85822243 | MS.gene97344:CDS |
| TGAGATAACAACTTCACAGG+GGG | 0.718246 | 1.2:-85827815 | MS.gene97344:CDS |
| GTATCGAAACCATGTCATCG+TGG | 0.720695 | 1.2:-85831704 | None:intergenic |
| TGATGAATTGGAGAGACACG+AGG | 0.721987 | 1.2:-85821425 | MS.gene97344:CDS |
| GAAGCTGCTATCTCGCATCG+AGG | 0.750129 | 1.2:-85831300 | MS.gene97344:CDS |
| GTGAGATAACAACTTCACAG+GGG | 0.793162 | 1.2:-85827816 | MS.gene97344:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 85819816 | 85831715 | 85819816 | ID=MS.gene97344 |
| chr1.2 | mRNA | 85819816 | 85831715 | 85819816 | ID=MS.gene97344.t1;Parent=MS.gene97344 |
| chr1.2 | exon | 85831563 | 85831715 | 85831563 | ID=MS.gene97344.t1.exon1;Parent=MS.gene97344.t1 |
| chr1.2 | CDS | 85831563 | 85831715 | 85831563 | ID=cds.MS.gene97344.t1;Parent=MS.gene97344.t1 |
| chr1.2 | exon | 85831149 | 85831370 | 85831149 | ID=MS.gene97344.t1.exon2;Parent=MS.gene97344.t1 |
| chr1.2 | CDS | 85831149 | 85831370 | 85831149 | ID=cds.MS.gene97344.t1;Parent=MS.gene97344.t1 |
| chr1.2 | exon | 85830181 | 85830276 | 85830181 | ID=MS.gene97344.t1.exon3;Parent=MS.gene97344.t1 |
| chr1.2 | CDS | 85830181 | 85830276 | 85830181 | ID=cds.MS.gene97344.t1;Parent=MS.gene97344.t1 |
| chr1.2 | exon | 85829336 | 85829388 | 85829336 | ID=MS.gene97344.t1.exon4;Parent=MS.gene97344.t1 |
| chr1.2 | CDS | 85829336 | 85829388 | 85829336 | ID=cds.MS.gene97344.t1;Parent=MS.gene97344.t1 |
| chr1.2 | exon | 85829019 | 85829115 | 85829019 | ID=MS.gene97344.t1.exon5;Parent=MS.gene97344.t1 |
| chr1.2 | CDS | 85829019 | 85829115 | 85829019 | ID=cds.MS.gene97344.t1;Parent=MS.gene97344.t1 |
| chr1.2 | exon | 85828633 | 85828706 | 85828633 | ID=MS.gene97344.t1.exon6;Parent=MS.gene97344.t1 |
| chr1.2 | CDS | 85828633 | 85828706 | 85828633 | ID=cds.MS.gene97344.t1;Parent=MS.gene97344.t1 |
| chr1.2 | exon | 85827762 | 85827876 | 85827762 | ID=MS.gene97344.t1.exon7;Parent=MS.gene97344.t1 |
| chr1.2 | CDS | 85827762 | 85827876 | 85827762 | ID=cds.MS.gene97344.t1;Parent=MS.gene97344.t1 |
| chr1.2 | exon | 85826822 | 85826932 | 85826822 | ID=MS.gene97344.t1.exon8;Parent=MS.gene97344.t1 |
| chr1.2 | CDS | 85826822 | 85826932 | 85826822 | ID=cds.MS.gene97344.t1;Parent=MS.gene97344.t1 |
| chr1.2 | exon | 85826096 | 85826172 | 85826096 | ID=MS.gene97344.t1.exon9;Parent=MS.gene97344.t1 |
| chr1.2 | CDS | 85826096 | 85826172 | 85826096 | ID=cds.MS.gene97344.t1;Parent=MS.gene97344.t1 |
| chr1.2 | exon | 85824444 | 85824510 | 85824444 | ID=MS.gene97344.t1.exon10;Parent=MS.gene97344.t1 |
| chr1.2 | CDS | 85824444 | 85824510 | 85824444 | ID=cds.MS.gene97344.t1;Parent=MS.gene97344.t1 |
| chr1.2 | exon | 85823604 | 85823669 | 85823604 | ID=MS.gene97344.t1.exon11;Parent=MS.gene97344.t1 |
| chr1.2 | CDS | 85823604 | 85823669 | 85823604 | ID=cds.MS.gene97344.t1;Parent=MS.gene97344.t1 |
| chr1.2 | exon | 85822416 | 85822523 | 85822416 | ID=MS.gene97344.t1.exon12;Parent=MS.gene97344.t1 |
| chr1.2 | CDS | 85822416 | 85822523 | 85822416 | ID=cds.MS.gene97344.t1;Parent=MS.gene97344.t1 |
| chr1.2 | exon | 85822175 | 85822305 | 85822175 | ID=MS.gene97344.t1.exon13;Parent=MS.gene97344.t1 |
| chr1.2 | CDS | 85822175 | 85822305 | 85822175 | ID=cds.MS.gene97344.t1;Parent=MS.gene97344.t1 |
| chr1.2 | exon | 85821381 | 85821447 | 85821381 | ID=MS.gene97344.t1.exon14;Parent=MS.gene97344.t1 |
| chr1.2 | CDS | 85821381 | 85821447 | 85821381 | ID=cds.MS.gene97344.t1;Parent=MS.gene97344.t1 |
| chr1.2 | exon | 85821195 | 85821262 | 85821195 | ID=MS.gene97344.t1.exon15;Parent=MS.gene97344.t1 |
| chr1.2 | CDS | 85821195 | 85821262 | 85821195 | ID=cds.MS.gene97344.t1;Parent=MS.gene97344.t1 |
| chr1.2 | exon | 85820862 | 85820955 | 85820862 | ID=MS.gene97344.t1.exon16;Parent=MS.gene97344.t1 |
| chr1.2 | CDS | 85820862 | 85820955 | 85820862 | ID=cds.MS.gene97344.t1;Parent=MS.gene97344.t1 |
| chr1.2 | exon | 85820475 | 85820545 | 85820475 | ID=MS.gene97344.t1.exon17;Parent=MS.gene97344.t1 |
| chr1.2 | CDS | 85820475 | 85820545 | 85820475 | ID=cds.MS.gene97344.t1;Parent=MS.gene97344.t1 |
| chr1.2 | exon | 85819816 | 85820194 | 85819816 | ID=MS.gene97344.t1.exon18;Parent=MS.gene97344.t1 |
| chr1.2 | CDS | 85819816 | 85820194 | 85819816 | ID=cds.MS.gene97344.t1;Parent=MS.gene97344.t1 |
| Gene Sequence |
| Protein sequence |
