AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780037655.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037655.01.T01 MTR_7g034590 90.533 169 12 2 1 166 1 168 6.87e-109 313
MsG0780037655.01.T01 MTR_7g034590 92.683 164 8 2 1 161 1 163 4.74e-108 311
MsG0780037655.01.T01 MTR_7g034590 79.882 169 12 3 1 166 1 150 5.10e-90 265
MsG0780037655.01.T01 MTR_6g045617 81.731 104 15 2 1 101 1 103 1.91e-53 170
MsG0780037655.01.T01 MTR_6g045607 93.590 78 5 0 167 244 1 78 8.33e-47 157
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037655.01.T01 AT3G01920 65.591 279 90 2 10 288 25 297 1.26e-134 384
MsG0780037655.01.T01 AT3G01920 59.804 306 90 3 10 288 25 324 2.49e-128 369

Find 97 sgRNAs with CRISPR-Local

Find 431 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGCTGAATCTTCATTAAAA+AGG 0.196340 7:-30371910 None:intergenic
ACATACCTTGTACATATTAA+TGG 0.203028 7:-30369430 None:intergenic
ATAATGTCATTAACTGGTTT+TGG 0.218311 7:-30371933 None:intergenic
CGAAAAGCCATGGAGGTTTA+TGG 0.252156 7:-30366173 None:intergenic
AATACCATCCAGTCTGAAAT+TGG 0.281224 7:-30371821 None:intergenic
ACAGTACACGTTCATCTTAA+TGG 0.283468 7:+30369276 MsG0780037655.01.T01:intron
CTATACTTCATAGGGCTATC+TGG 0.292625 7:+30372051 MsG0780037655.01.T01:three_prime_UTR
TGGTTCTGACTCATGGAAAT+TGG 0.296845 7:+30366419 MsG0780037655.01.T01:CDS
CCATTTCTAAACGATGATAA+TGG 0.316894 7:-30366128 None:intergenic
AAACCAGTTAATGACATTAT+AGG 0.325988 7:+30371936 MsG0780037655.01.T01:three_prime_UTR
TGTCCTATAATGTCATTAAC+TGG 0.334265 7:-30371939 None:intergenic
CCAAACCTTATGCACTGTTT+TGG 0.334771 7:-30369313 None:intergenic
CTTTCCTTCCCGTAGGACTC+TGG 0.335338 7:-30370932 None:intergenic
TATGTATCAGCTATCATAAC+TGG 0.344189 7:-30370416 None:intergenic
CTGTGTATTTGAGACGCTTT+GGG 0.344518 7:-30366269 None:intergenic
CCAGATGCCCTATACTTCAT+AGG 0.351707 7:+30372042 MsG0780037655.01.T01:three_prime_UTR
CCAAAACAGTGCATAAGGTT+TGG 0.352337 7:+30369313 MsG0780037655.01.T01:CDS
TCATCCATTCGTCTTCGTTC+AGG 0.356427 7:-30370388 None:intergenic
CAATGGCTGAGTTGTTTGTT+AGG 0.362631 7:-30367660 None:intergenic
TCTGTGTATTTGAGACGCTT+TGG 0.364526 7:-30366270 None:intergenic
CAGATAGCCCTATGAAGTAT+AGG 0.371288 7:-30372050 None:intergenic
TAGGACTCTGGGAGGCAATT+TGG 0.383853 7:-30370920 None:intergenic
CCATTATCATCGTTTAGAAA+TGG 0.383923 7:+30366128 MsG0780037655.01.T01:exon
GACATAGATAAGTACACATC+TGG 0.385667 7:+30368064 MsG0780037655.01.T01:CDS
CAAAACAGTGCATAAGGTTT+GGG 0.400628 7:+30369314 MsG0780037655.01.T01:CDS
TATATTACAGGATGGTGGTT+TGG 0.403125 7:+30366374 MsG0780037655.01.T01:intron
AATTTCAGACTGGATGGTAT+TGG 0.403596 7:+30371823 MsG0780037655.01.T01:CDS
AGATAGCCCTATGAAGTATA+GGG 0.411169 7:-30372049 None:intergenic
AAATTCTCTTCTGCATTGTT+CGG 0.413196 7:+30366061 None:intergenic
CTACTACTCCTCGGGATTTG+TGG 0.416279 7:-30366224 None:intergenic
CTTTAGTATTGCTTGACAAA+TGG 0.419936 7:-30369395 None:intergenic
ACCAGGTAGGCAATGCTTAA+CGG 0.428842 7:-30368131 None:intergenic
CATTACCAAAACAGTGCATA+AGG 0.430230 7:+30369308 MsG0780037655.01.T01:CDS
GCCGTTAAGCATTGCCTACC+TGG 0.441696 7:+30368130 MsG0780037655.01.T01:CDS
CCTCGGGATTTGTGGCTTCG+TGG 0.442811 7:-30366216 None:intergenic
TACATTGAAGCTGACCCATC+TGG 0.446109 7:+30366399 MsG0780037655.01.T01:CDS
ACCCATCTGGTTCTGACTCA+TGG 0.449809 7:+30366412 MsG0780037655.01.T01:CDS
CCTATGAAGTATAGGGCATC+TGG 0.452688 7:-30372042 None:intergenic
TCATCGTTTAGAAATGGAAA+TGG 0.462571 7:+30366134 MsG0780037655.01.T01:exon
GTTATGATAGCTGATACATA+TGG 0.475070 7:+30370419 MsG0780037655.01.T01:CDS
CTGCATTGTTCGGTGCTACA+AGG 0.483295 7:+30366071 None:intergenic
AAGGGTGATTAACATTCAAA+TGG 0.488049 7:-30371891 None:intergenic
TTTCCTTCCCGTAGGACTCT+GGG 0.494877 7:-30370931 None:intergenic
CATTGATACTACTACTCCTC+GGG 0.495623 7:-30366232 None:intergenic
GCTTGACAAATGGCATCGTC+AGG 0.502742 7:-30369385 None:intergenic
ATTAACATTCAAATGGCAGC+AGG 0.507067 7:-30371884 None:intergenic
ATACCTGCGTAGCCGTTCAA+TGG 0.512775 7:-30367677 None:intergenic
GAAATGGCAGCTTGTATTTG+TGG 0.522512 7:+30366150 MsG0780037655.01.T01:CDS
CCGAGGAGTAGTAGTATCAA+TGG 0.529514 7:+30366233 MsG0780037655.01.T01:CDS
TCTGGGTTTCCGTGTGGTGA+TGG 0.529851 7:+30368082 MsG0780037655.01.T01:CDS
CGGCTTTGAATAAATTTGCA+TGG 0.532203 7:-30368111 None:intergenic
TTCAGGGTCCAATTTCAGAC+TGG 0.535241 7:+30371813 MsG0780037655.01.T01:intron
ATTGCCTCCCAGAGTCCTAC+GGG 0.536870 7:+30370924 MsG0780037655.01.T01:CDS
AATTGCCTCCCAGAGTCCTA+CGG 0.550070 7:+30370923 MsG0780037655.01.T01:CDS
CAAGAATATAGACGGTTCAA+AGG 0.550560 7:+30367797 MsG0780037655.01.T01:CDS
CAGATGCCCTATACTTCATA+GGG 0.552112 7:+30372043 MsG0780037655.01.T01:three_prime_UTR
GAAGATAATCAGCAAACTGA+TGG 0.553611 7:+30371845 MsG0780037655.01.T01:CDS
CCATTGATACTACTACTCCT+CGG 0.566069 7:-30366233 None:intergenic
AAATGGCATCGTCAGGCATA+CGG 0.567821 7:-30369378 None:intergenic
GGGTCCAATTTCAGACTGGA+TGG 0.571381 7:+30371817 MsG0780037655.01.T01:intron
CAGAGTCCTACGGGAAGGAA+AGG 0.573248 7:+30370933 MsG0780037655.01.T01:CDS
GCACTGACAGTGTATCAGTA+GGG 0.584797 7:-30366485 None:intergenic
TTCCATGAGTCAGAACCAGA+TGG 0.586697 7:-30366414 None:intergenic
TCAGCAAACTGATGGTGAAG+AGG 0.588222 7:+30371853 MsG0780037655.01.T01:CDS
CAGCCATTGAACGGCTACGC+AGG 0.588246 7:+30367674 MsG0780037655.01.T01:CDS
AATATTATATTACAGGATGG+TGG 0.590435 7:+30366369 MsG0780037655.01.T01:intron
CAAACAACTCAGCCATTGAA+CGG 0.593103 7:+30367665 MsG0780037655.01.T01:CDS
TTTCCGTGTGGTGATGGTCA+AGG 0.602525 7:+30368088 MsG0780037655.01.T01:CDS
AGTTCCTGAACGAAGACGAA+TGG 0.605092 7:+30370384 MsG0780037655.01.T01:CDS
CATTTGTCAAGCAATACTAA+AGG 0.605552 7:+30369396 MsG0780037655.01.T01:CDS
TTTGTGGCCATAAACCTCCA+TGG 0.611979 7:+30366166 MsG0780037655.01.T01:CDS
TGTTGATGGTGGTGTAAGAG+TGG 0.616961 7:+30370870 MsG0780037655.01.T01:CDS
GAGAAAGCGTCGAAAAGCCA+TGG 0.618735 7:-30366183 None:intergenic
TACAGAATCAAGAATATAGA+CGG 0.622409 7:+30367789 MsG0780037655.01.T01:intron
TCCATGAGTCAGAACCAGAT+GGG 0.626499 7:-30366413 None:intergenic
TAACTACCTTTCCTTCCCGT+AGG 0.630895 7:-30370939 None:intergenic
AGCACTGACAGTGTATCAGT+AGG 0.631912 7:-30366486 None:intergenic
TATCTATGTCGCTAAATGAG+TGG 0.640128 7:-30368051 None:intergenic
AGCTGATACATATGGACCAG+AGG 0.644000 7:+30370427 MsG0780037655.01.T01:CDS
CTGCTGCCAAATATGCATCA+CGG 0.644154 7:+30369341 MsG0780037655.01.T01:CDS
CCTCCCAGAGTCCTACGGGA+AGG 0.644465 7:+30370928 MsG0780037655.01.T01:CDS
ACATAGATAAGTACACATCT+GGG 0.647148 7:+30368065 MsG0780037655.01.T01:CDS
GAGAGAATACTTACAGGACC+AGG 0.653062 7:-30368148 None:intergenic
GACATTATAGGACACAAAGG+TGG 0.654143 7:+30371948 MsG0780037655.01.T01:three_prime_UTR
TGGCCTTGACCATCACCACA+CGG 0.655857 7:-30368091 None:intergenic
GTACACCATTAATATGTACA+AGG 0.663930 7:+30369425 MsG0780037655.01.T01:CDS
AGATAATACTCGCTTCAACA+AGG 0.665078 7:+30366290 MsG0780037655.01.T01:CDS
TACACATCTGGGTTTCCGTG+TGG 0.674433 7:+30368076 MsG0780037655.01.T01:CDS
AATGACATTATAGGACACAA+AGG 0.678889 7:+30371945 MsG0780037655.01.T01:three_prime_UTR
TTAACATTCAAATGGCAGCA+GGG 0.683879 7:-30371883 None:intergenic
CCACGAAGCCACAAATCCCG+AGG 0.692006 7:+30366216 MsG0780037655.01.T01:CDS
AAAGCGTCGAAAAGCCATGG+AGG 0.697341 7:-30366180 None:intergenic
TTTGGTCATGTCAACCACAG+TGG 0.703360 7:-30370902 None:intergenic
GAATACTTACAGGACCAGGT+AGG 0.711191 7:-30368144 None:intergenic
GAGTGGCATAAGATGCTAAG+CGG 0.715867 7:-30368034 None:intergenic
CCTTCCCGTAGGACTCTGGG+AGG 0.724104 7:-30370928 None:intergenic
AGTGGCTCAGTCGTCCACTG+TGG 0.724666 7:+30370888 MsG0780037655.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAAAAATTAAAAAATACTA+TGG + Chr7:30368497-30368516 MsG0780037655.01.T01:intron 10.0%
!!! GTATTTTTTAATTTTTTCTT+TGG - Chr7:30368495-30368514 None:intergenic 10.0%
!!! TATTTTATAATTATTTACAC+TGG - Chr7:30370483-30370502 None:intergenic 10.0%
!! AATAATTATTATGTTGTTAG+TGG + Chr7:30368639-30368658 MsG0780037655.01.T01:intron 15.0%
!! ATAATTATTATGTTGTTAGT+GGG + Chr7:30368640-30368659 MsG0780037655.01.T01:intron 15.0%
!! ATCAAATATATATCGAAATA+CGG + Chr7:30369833-30369852 MsG0780037655.01.T01:intron 15.0%
!! CAACTTGTATTTAAATATTA+CGG - Chr7:30367067-30367086 None:intergenic 15.0%
!! CATTGAATAATTAATATAGT+TGG + Chr7:30371205-30371224 MsG0780037655.01.T01:intron 15.0%
!! CTAACAACATAATAATTATT+TGG - Chr7:30368639-30368658 None:intergenic 15.0%
!! TCATAAATAAATGGATAATA+TGG - Chr7:30367544-30367563 None:intergenic 15.0%
!! TTTATATATGTGTTAGAAAT+AGG + Chr7:30370560-30370579 MsG0780037655.01.T01:intron 15.0%
!!! AATAAATTAGCAAACTTTTT+TGG - Chr7:30370769-30370788 None:intergenic 15.0%
!!! ATAGACAATTCTTAAAATTT+TGG - Chr7:30370193-30370212 None:intergenic 15.0%
!! AAGAACTTGAAATTTATGAA+TGG - Chr7:30371096-30371115 None:intergenic 20.0%
!! AGAACTTGAAATTTATGAAT+GGG - Chr7:30371095-30371114 None:intergenic 20.0%
!! AGATATTAAAACCATTACTT+TGG + Chr7:30370825-30370844 MsG0780037655.01.T01:intron 20.0%
!! ATATGTTATTAATCTCGAAA+AGG - Chr7:30369061-30369080 None:intergenic 20.0%
!! ATCATTCACTGATAATAAAA+AGG + Chr7:30367103-30367122 MsG0780037655.01.T01:intron 20.0%
!! CATGAATTATATTTGAACAT+AGG - Chr7:30371749-30371768 None:intergenic 20.0%
!! CTGTAAAAAAAACAAGAAAT+AGG + Chr7:30370583-30370602 MsG0780037655.01.T01:intron 20.0%
!! GCAGATATTTAAAAATGAAA+TGG + Chr7:30369579-30369598 MsG0780037655.01.T01:intron 20.0%
!! TAAATAGGATGTAAAGTAAT+TGG - Chr7:30367907-30367926 None:intergenic 20.0%
!! TATGTTATTAATCTCGAAAA+GGG - Chr7:30369060-30369079 None:intergenic 20.0%
!! TCAACACATTTAATCTAAAT+AGG - Chr7:30367922-30367941 None:intergenic 20.0%
!! TGAAAAATTAAAGAAAACAG+AGG - Chr7:30368913-30368932 None:intergenic 20.0%
!! TGAACAATTATGGAAAATAA+GGG - Chr7:30370288-30370307 None:intergenic 20.0%
!!! ACAATTCTTAAAATTTTGGT+TGG - Chr7:30370189-30370208 None:intergenic 20.0%
!!! AGAAATTATGTTAGTTTTCA+GGG - Chr7:30368451-30368470 None:intergenic 20.0%
!!! ATCAAAATTTTCTTCATGTA+TGG + Chr7:30367949-30367968 MsG0780037655.01.T01:intron 20.0%
!!! CATCAAAATGAAATTGTTTT+GGG + Chr7:30371127-30371146 MsG0780037655.01.T01:intron 20.0%
!!! GATTTAGAATTTATGTTTAG+TGG + Chr7:30368949-30368968 MsG0780037655.01.T01:intron 20.0%
!!! TAAATTGGTAACAAAACAAT+AGG - Chr7:30369193-30369212 None:intergenic 20.0%
!!! TAGAAATTATGTTAGTTTTC+AGG - Chr7:30368452-30368471 None:intergenic 20.0%
!!! TCATCAAAATGAAATTGTTT+TGG + Chr7:30371126-30371145 MsG0780037655.01.T01:intron 20.0%
!!! TCATTTTCTCAACTTATTAT+CGG - Chr7:30366805-30366824 None:intergenic 20.0%
!!! TCTCTACTAATAAGTTTTAT+AGG + Chr7:30370793-30370812 MsG0780037655.01.T01:intron 20.0%
!!! TTTTTTTTTATCAGAGGTAT+GGG + Chr7:30366773-30366792 MsG0780037655.01.T01:intron 20.0%
! AAAATTCCAAGGTAAGATTT+AGG - Chr7:30370344-30370363 None:intergenic 25.0%
! AAACCAGTTAATGACATTAT+AGG + Chr7:30371936-30371955 MsG0780037655.01.T01:three_prime_UTR 25.0%
! AAATAACCATGCAATAGAAA+CGG - Chr7:30370458-30370477 None:intergenic 25.0%
! AACATTATGGAAATCAATTG+TGG - Chr7:30371611-30371630 None:intergenic 25.0%
! AAGTTTACAAATTCTTACGT+TGG + Chr7:30370974-30370993 MsG0780037655.01.T01:intron 25.0%
! AATATTATATTACAGGATGG+TGG + Chr7:30366369-30366388 MsG0780037655.01.T01:intron 25.0%
! AATGGATAATATGGAGTTAA+CGG - Chr7:30367535-30367554 None:intergenic 25.0%
! ACATACCTTGTACATATTAA+TGG - Chr7:30369433-30369452 None:intergenic 25.0%
! ACATTATGGAAATCAATTGT+GGG - Chr7:30371610-30371629 None:intergenic 25.0%
! ACCAATATTATATTACAGGA+TGG + Chr7:30366366-30366385 MsG0780037655.01.T01:intron 25.0%
! ACCATCCTGTAATATAATAT+TGG - Chr7:30366370-30366389 None:intergenic 25.0%
! ACTTATACAACGAGATATTT+GGG + Chr7:30371448-30371467 MsG0780037655.01.T01:intron 25.0%
! AGTCATTCTTATTCATCAAT+TGG + Chr7:30369095-30369114 MsG0780037655.01.T01:intron 25.0%
! ATATTGCAAATTGCAGTAAA+TGG - Chr7:30369149-30369168 None:intergenic 25.0%
! ATGCTGAATCTTCATTAAAA+AGG - Chr7:30371913-30371932 None:intergenic 25.0%
! ATGTTATTAATCTCGAAAAG+GGG - Chr7:30369059-30369078 None:intergenic 25.0%
! ATTAACAAACATTCTGTGTT+GGG + Chr7:30367176-30367195 MsG0780037655.01.T01:intron 25.0%
! CATAAAGAAGAAAAATTCCA+AGG - Chr7:30370355-30370374 None:intergenic 25.0%
! CTATTTATCACAAATCTACT+TGG + Chr7:30370724-30370743 MsG0780037655.01.T01:intron 25.0%
! CTGAACCAATATTATATTAC+AGG + Chr7:30366362-30366381 MsG0780037655.01.T01:intron 25.0%
! GTGAACAATTATGGAAAATA+AGG - Chr7:30370289-30370308 None:intergenic 25.0%
! TACAAAACATTGCAACATTA+TGG - Chr7:30371624-30371643 None:intergenic 25.0%
! TACAGAATCAAGAATATAGA+CGG + Chr7:30367789-30367808 MsG0780037655.01.T01:intron 25.0%
! TGCTGAATCTTCATTAAAAA+GGG - Chr7:30371912-30371931 None:intergenic 25.0%
! TGTAACTGGAAAATTCTTAT+CGG - Chr7:30370657-30370676 None:intergenic 25.0%
! TGTTCAATGAATCTAAAAAG+TGG + Chr7:30371262-30371281 MsG0780037655.01.T01:intron 25.0%
! TTTAAGCTAGAAAAGAAGTA+AGG - Chr7:30366529-30366548 None:intergenic 25.0%
!! CAAATTGCAAATTTTCCTTA+TGG + Chr7:30371697-30371716 MsG0780037655.01.T01:intron 25.0%
!! CATTAGTACTTAGAGATTTT+TGG - Chr7:30368401-30368420 None:intergenic 25.0%
!! GAATGTTTGTTAATGAAGTT+CGG - Chr7:30367170-30367189 None:intergenic 25.0%
!! GTGAGCATATTAATGATTTT+TGG + Chr7:30368191-30368210 MsG0780037655.01.T01:intron 25.0%
!! GTTTCTTTAATCTTTTCTAC+CGG + Chr7:30367303-30367322 MsG0780037655.01.T01:intron 25.0%
!! TTTCTTTAATCTTTTCTACC+GGG + Chr7:30367304-30367323 MsG0780037655.01.T01:intron 25.0%
!!! AATAAAGTATTGATCACATC+TGG - Chr7:30371302-30371321 None:intergenic 25.0%
!!! AATTGAGTTGAAAGTGTAAA+GGG - Chr7:30366339-30366358 None:intergenic 25.0%
!!! ACAAGGTATGTTTAATTTGT+TGG + Chr7:30369442-30369461 MsG0780037655.01.T01:intron 25.0%
!!! ACATATTTTCCCTTTTGTTT+GGG - Chr7:30370524-30370543 None:intergenic 25.0%
!!! AGCATATTAATGATTTTTGG+TGG + Chr7:30368194-30368213 MsG0780037655.01.T01:intron 25.0%
!!! ATAATGTCATTAACTGGTTT+TGG - Chr7:30371936-30371955 None:intergenic 25.0%
!!! ATATTAATGATTTTTGGTGG+GGG + Chr7:30368197-30368216 MsG0780037655.01.T01:intron 25.0%
!!! ATTAGCAAACTTTTTTGGTT+CGG - Chr7:30370764-30370783 None:intergenic 25.0%
!!! CATATTAATGATTTTTGGTG+GGG + Chr7:30368196-30368215 MsG0780037655.01.T01:intron 25.0%
!!! GCATATTAATGATTTTTGGT+GGG + Chr7:30368195-30368214 MsG0780037655.01.T01:intron 25.0%
!!! GTTGTTAATCTTTTGAAACA+AGG + Chr7:30366447-30366466 MsG0780037655.01.T01:CDS 25.0%
!!! GTTTTTTTTTATCAGAGGTA+TGG + Chr7:30366772-30366791 MsG0780037655.01.T01:intron 25.0%
AAATATCTGCATCACTTCAT+TGG - Chr7:30369569-30369588 None:intergenic 30.0%
AAGGGTGATTAACATTCAAA+TGG - Chr7:30371894-30371913 None:intergenic 30.0%
AATAGGAAATTTCATGTTCG+CGG + Chr7:30370600-30370619 MsG0780037655.01.T01:intron 30.0%
AATGACATTATAGGACACAA+AGG + Chr7:30371945-30371964 MsG0780037655.01.T01:three_prime_UTR 30.0%
AATTGCACACAATAAGTAAG+TGG - Chr7:30371348-30371367 None:intergenic 30.0%
ACATAGATAAGTACACATCT+GGG + Chr7:30368065-30368084 MsG0780037655.01.T01:CDS 30.0%
ATACAGCATGAACACTAAAT+TGG - Chr7:30369208-30369227 None:intergenic 30.0%
ATTCAGTAACCTTGTACATT+AGG + Chr7:30369496-30369515 MsG0780037655.01.T01:intron 30.0%
CACTTATACAACGAGATATT+TGG + Chr7:30371447-30371466 MsG0780037655.01.T01:intron 30.0%
CATAATTGTTCACAAGAGTA+TGG + Chr7:30370296-30370315 MsG0780037655.01.T01:intron 30.0%
CATACTCTTGTGAACAATTA+TGG - Chr7:30370298-30370317 None:intergenic 30.0%
CATTAACAAACATTCTGTGT+TGG + Chr7:30367175-30367194 MsG0780037655.01.T01:intron 30.0%
CATTTGTCAAGCAATACTAA+AGG + Chr7:30369396-30369415 MsG0780037655.01.T01:CDS 30.0%
CCATTATCATCGTTTAGAAA+TGG + Chr7:30366128-30366147 MsG0780037655.01.T01:exon 30.0%
CCATTTATTTATGAGCAAGT+AGG + Chr7:30367550-30367569 MsG0780037655.01.T01:intron 30.0%
CCATTTCTAAACGATGATAA+TGG - Chr7:30366131-30366150 None:intergenic 30.0%
CCTACTTGCTCATAAATAAA+TGG - Chr7:30367553-30367572 None:intergenic 30.0%
CTAAATGAGGGTAAATAAGT+TGG + Chr7:30369943-30369962 MsG0780037655.01.T01:intron 30.0%
CTAATATGTCAAAAGCCATT+AGG - Chr7:30371384-30371403 None:intergenic 30.0%
CTTCATGTGTAAAATGTAAC+TGG - Chr7:30370671-30370690 None:intergenic 30.0%
CTTTAGTATTGCTTGACAAA+TGG - Chr7:30369398-30369417 None:intergenic 30.0%
GACTAAAATGACAGTTTACT+TGG - Chr7:30366627-30366646 None:intergenic 30.0%
GCAATATCATGTCTTTATGT+GGG + Chr7:30369162-30369181 MsG0780037655.01.T01:intron 30.0%
GTACACCATTAATATGTACA+AGG + Chr7:30369425-30369444 MsG0780037655.01.T01:CDS 30.0%
GTATACTGGAAAAAGGTTAT+AGG - Chr7:30370239-30370258 None:intergenic 30.0%
GTTATGATAGCTGATACATA+TGG + Chr7:30370419-30370438 MsG0780037655.01.T01:CDS 30.0%
TAAATATAATGTGTCAGTGC+TGG + Chr7:30366840-30366859 MsG0780037655.01.T01:intron 30.0%
TAATGCATCTTTGTTGAGTA+TGG + Chr7:30366973-30366992 MsG0780037655.01.T01:intron 30.0%
TATGTATCAGCTATCATAAC+TGG - Chr7:30370419-30370438 None:intergenic 30.0%
TCATCGTTTAGAAATGGAAA+TGG + Chr7:30366134-30366153 MsG0780037655.01.T01:exon 30.0%
TGCAATATCATGTCTTTATG+TGG + Chr7:30369161-30369180 MsG0780037655.01.T01:intron 30.0%
TGTCCTATAATGTCATTAAC+TGG - Chr7:30371942-30371961 None:intergenic 30.0%
TTAAGAGTCATGTGATTTCA+GGG + Chr7:30371797-30371816 MsG0780037655.01.T01:intron 30.0%
TTCAACGTAATCACATTTGT+CGG + Chr7:30366732-30366751 MsG0780037655.01.T01:intron 30.0%
! ATTTTTCCGTGATGCATATT+TGG - Chr7:30369350-30369369 None:intergenic 30.0%
! CACATATTTTCCCTTTTGTT+TGG - Chr7:30370525-30370544 None:intergenic 30.0%
! GTTGAAGTCATTGATGATTA+TGG + Chr7:30367993-30368012 MsG0780037655.01.T01:intron 30.0%
! TTATTTGGACGTAGTCTTAA+TGG - Chr7:30368624-30368643 None:intergenic 30.0%
! TTTTGACATATTAGCTAACC+CGG + Chr7:30371390-30371409 MsG0780037655.01.T01:intron 30.0%
!! GAATTGAGTTGAAAGTGTAA+AGG - Chr7:30366340-30366359 None:intergenic 30.0%
!! TTTTGTGCTAACTGATTTTG+TGG + Chr7:30368717-30368736 MsG0780037655.01.T01:intron 30.0%
!!! AACCATTACTTTGGTTTTTC+AGG + Chr7:30370834-30370853 MsG0780037655.01.T01:intron 30.0%
!!! ACCATTACTTTGGTTTTTCA+GGG + Chr7:30370835-30370854 MsG0780037655.01.T01:intron 30.0%
!!! GACTCGTTTTTTTTTATCAG+AGG + Chr7:30366767-30366786 MsG0780037655.01.T01:intron 30.0%
!!! TATTAATGATTTTTGGTGGG+GGG + Chr7:30368198-30368217 MsG0780037655.01.T01:intron 30.0%
!!! TGTTGGATCATTTTTTGTCT+TGG + Chr7:30369459-30369478 MsG0780037655.01.T01:intron 30.0%
AAAGCGGAATAGCAGTTAAT+GGG - Chr7:30369009-30369028 None:intergenic 35.0%
AAGTGTACCATCCATATTAG+CGG - Chr7:30371045-30371064 None:intergenic 35.0%
AATTTCAGACTGGATGGTAT+TGG + Chr7:30371823-30371842 MsG0780037655.01.T01:CDS 35.0%
ACAAATCTACTTGGTATGCT+TGG + Chr7:30370733-30370752 MsG0780037655.01.T01:intron 35.0%
ACAGTACACGTTCATCTTAA+TGG + Chr7:30369276-30369295 MsG0780037655.01.T01:intron 35.0%
ACCCTGAAAAACCAAAGTAA+TGG - Chr7:30370839-30370858 None:intergenic 35.0%
ACTCGCAAACAAAACCTTAA+AGG - Chr7:30369670-30369689 None:intergenic 35.0%
ACTTTCGAGAGAATACTTAC+AGG - Chr7:30368157-30368176 None:intergenic 35.0%
AGATAATACTCGCTTCAACA+AGG + Chr7:30366290-30366309 MsG0780037655.01.T01:CDS 35.0%
AGATAGCCCTATGAAGTATA+GGG - Chr7:30372052-30372071 None:intergenic 35.0%
AGATTGTAACATAACCCCAA+TGG - Chr7:30367041-30367060 None:intergenic 35.0%
AGTTACATTGGTCCTTGAAT+GGG - Chr7:30367389-30367408 None:intergenic 35.0%
ATACCTGCCTATAACCTTTA+GGG + Chr7:30370255-30370274 MsG0780037655.01.T01:intron 35.0%
ATATGCATCACGGAAAAATG+TGG + Chr7:30369351-30369370 MsG0780037655.01.T01:CDS 35.0%
ATCTAACACCTACGATGTAA+AGG - Chr7:30368551-30368570 None:intergenic 35.0%
ATGGCACAATGGGTAAAAAA+TGG - Chr7:30371016-30371035 None:intergenic 35.0%
ATGTCTTTCGCTAGTTACAT+TGG - Chr7:30367401-30367420 None:intergenic 35.0%
ATGTTGAGAACCATGTCTTT+AGG - Chr7:30370136-30370155 None:intergenic 35.0%
ATTAACATTCAAATGGCAGC+AGG - Chr7:30371887-30371906 None:intergenic 35.0%
ATTGGGGTTATGTTACAATC+TGG + Chr7:30367040-30367059 MsG0780037655.01.T01:intron 35.0%
CAAAACAGTGCATAAGGTTT+GGG + Chr7:30369314-30369333 MsG0780037655.01.T01:CDS 35.0%
CAAGAATATAGACGGTTCAA+AGG + Chr7:30367797-30367816 MsG0780037655.01.T01:CDS 35.0%
CAGGCATACTGAAAAGAAAT+TGG - Chr7:30370216-30370235 None:intergenic 35.0%
CATGCGAAATATCAAGACAT+AGG + Chr7:30368524-30368543 MsG0780037655.01.T01:intron 35.0%
CATTACCAAAACAGTGCATA+AGG + Chr7:30369308-30369327 MsG0780037655.01.T01:CDS 35.0%
CCAATTGGATTTCTATGTAG+TGG + Chr7:30367865-30367884 MsG0780037655.01.T01:intron 35.0%
CCACTACATAGAAATCCAAT+TGG - Chr7:30367868-30367887 None:intergenic 35.0%
CTAACTCAACCTTACTAAAC+CGG - Chr7:30370164-30370183 None:intergenic 35.0%
CTCGCAAACAAAACCTTAAA+GGG - Chr7:30369669-30369688 None:intergenic 35.0%
CTTAAGAGTCATGTGATTTC+AGG + Chr7:30371796-30371815 MsG0780037655.01.T01:intron 35.0%
CTTGTACCTAAATCTTACCT+TGG + Chr7:30370335-30370354 MsG0780037655.01.T01:intron 35.0%
GAAATCAATTGTGGGAAATG+TGG - Chr7:30371602-30371621 None:intergenic 35.0%
GAAGATAATCAGCAAACTGA+TGG + Chr7:30371845-30371864 MsG0780037655.01.T01:CDS 35.0%
GACATAGATAAGTACACATC+TGG + Chr7:30368064-30368083 MsG0780037655.01.T01:CDS 35.0%
GAGATAGGCTGATGTAAAAA+TGG - Chr7:30370026-30370045 None:intergenic 35.0%
GGATTGAACTTTGAACTTCT+TGG - Chr7:30368430-30368449 None:intergenic 35.0%
GGTTGGATTGCAAAACATTT+AGG + Chr7:30371423-30371442 MsG0780037655.01.T01:intron 35.0%
TAAAGCGGAATAGCAGTTAA+TGG - Chr7:30369010-30369029 None:intergenic 35.0%
TAGTTACATTGGTCCTTGAA+TGG - Chr7:30367390-30367409 None:intergenic 35.0%
TATAAGCAGAGGAACACTTT+AGG + Chr7:30371180-30371199 MsG0780037655.01.T01:intron 35.0%
TATACCTGCCTATAACCTTT+AGG + Chr7:30370254-30370273 MsG0780037655.01.T01:intron 35.0%
TATCTATGTCGCTAAATGAG+TGG - Chr7:30368054-30368073 None:intergenic 35.0%
TATGCATCACGGAAAAATGT+GGG + Chr7:30369352-30369371 MsG0780037655.01.T01:CDS 35.0%
TATTTATGAGCAAGTAGGAG+AGG + Chr7:30367555-30367574 MsG0780037655.01.T01:intron 35.0%
TCGCAAACAAAACCTTAAAG+GGG - Chr7:30369668-30369687 None:intergenic 35.0%
TCTCTGTCTTTGTAAATAGC+CGG - Chr7:30368786-30368805 None:intergenic 35.0%
TGGCACAATGGGTAAAAAAT+GGG - Chr7:30371015-30371034 None:intergenic 35.0%
TTAACATTCAAATGGCAGCA+GGG - Chr7:30371886-30371905 None:intergenic 35.0%
TTCAGTAAGAGCTTTCCTAA+TGG + Chr7:30371366-30371385 MsG0780037655.01.T01:intron 35.0%
TTGTAACTTCGACTAATGCA+GGG + Chr7:30367468-30367487 MsG0780037655.01.T01:intron 35.0%
TTGTACATTAGGCCAAAAGT+AGG + Chr7:30369507-30369526 MsG0780037655.01.T01:intron 35.0%
TTTAATGCAGAGCTAAACAC+AGG + Chr7:30368685-30368704 MsG0780037655.01.T01:intron 35.0%
TTTGTAACTTCGACTAATGC+AGG + Chr7:30367467-30367486 MsG0780037655.01.T01:intron 35.0%
! AATACCATCCAGTCTGAAAT+TGG - Chr7:30371824-30371843 None:intergenic 35.0%
! AATGAGGGTAAATAAGTTGG+CGG + Chr7:30369946-30369965 MsG0780037655.01.T01:intron 35.0%
! GATGATGATGATGATGATGA+TGG - Chr7:30366109-30366128 None:intergenic 35.0%
! GTAGCTTGACATCTATTTCT+TGG + Chr7:30368277-30368296 MsG0780037655.01.T01:intron 35.0%
! GTGACAAAGTGTGTTTTTCA+GGG - Chr7:30369545-30369564 None:intergenic 35.0%
! GTGTAGAGTGTTATCACTAT+AGG - Chr7:30367494-30367513 None:intergenic 35.0%
! TACTTTTGGCCTAATGTACA+AGG - Chr7:30369508-30369527 None:intergenic 35.0%
! TATATTACAGGATGGTGGTT+TGG + Chr7:30366374-30366393 MsG0780037655.01.T01:intron 35.0%
! TCAAGCTACTTGATAGTTCA+TGG - Chr7:30368266-30368285 None:intergenic 35.0%
! TGTGACAAAGTGTGTTTTTC+AGG - Chr7:30369546-30369565 None:intergenic 35.0%
! TTCTCTAGTCTTCACAATAG+TGG + Chr7:30368979-30368998 MsG0780037655.01.T01:intron 35.0%
! TTCTGATCACCTCTATTTTC+TGG + Chr7:30368855-30368874 MsG0780037655.01.T01:intron 35.0%
! TTTTTACATCAGCCTATCTC+AGG + Chr7:30370026-30370045 MsG0780037655.01.T01:intron 35.0%
!! AGTTTGTTATAACCCATGTG+AGG + Chr7:30371500-30371519 MsG0780037655.01.T01:intron 35.0%
!! ATTTTCCCTTTTGTTTGGGA+AGG - Chr7:30370520-30370539 None:intergenic 35.0%
!! CAGAGCAAAGTTCTAAATGA+GGG + Chr7:30369931-30369950 MsG0780037655.01.T01:intron 35.0%
!! CGGCTTTGAATAAATTTGCA+TGG - Chr7:30368114-30368133 None:intergenic 35.0%
!! GGTTTTGCTCTTGTTTCAAT+TGG + Chr7:30367212-30367231 MsG0780037655.01.T01:intron 35.0%
!! TCAGAGCAAAGTTCTAAATG+AGG + Chr7:30369930-30369949 MsG0780037655.01.T01:intron 35.0%
!! TTTTCCCTTTTGTTTGGGAA+GGG - Chr7:30370519-30370538 None:intergenic 35.0%
!!! CTTGATTTTGTTGTTGATGG+TGG + Chr7:30370859-30370878 MsG0780037655.01.T01:CDS 35.0%
!!! GGTCTTGATTTTGTTGTTGA+TGG + Chr7:30370856-30370875 MsG0780037655.01.T01:CDS 35.0%
!!! TAAGGTTTTGTTTGCGAGTT+AGG + Chr7:30369671-30369690 MsG0780037655.01.T01:intron 35.0%
!!! TTAGAGATTTTTGGCGAAAC+AGG - Chr7:30368392-30368411 None:intergenic 35.0%
!!! TTTTTTACCCATTGTGCCAT+TGG + Chr7:30371016-30371035 MsG0780037655.01.T01:intron 35.0%
AACAAACTCATGTTAGCTCG+TGG - Chr7:30371488-30371507 None:intergenic 40.0%
AACAAGAGCAAAACCATGCA+TGG - Chr7:30367207-30367226 None:intergenic 40.0%
AACCATGTCTTTAGGCAATG+TGG - Chr7:30370128-30370147 None:intergenic 40.0%
AAGAAAACAGAGGCAAGAAG+CGG - Chr7:30368903-30368922 None:intergenic 40.0%
AAGGTTATAGGCAGGTATAC+TGG - Chr7:30370253-30370272 None:intergenic 40.0%
AATAGAAACGGTGATACCTC+TGG - Chr7:30370446-30370465 None:intergenic 40.0%
ACAAACTCATGTTAGCTCGT+GGG - Chr7:30371487-30371506 None:intergenic 40.0%
ACACAACACAAATATGCTCC+TGG - Chr7:30367769-30367788 None:intergenic 40.0%
ACATAGGACCTTTACATCGT+AGG + Chr7:30368540-30368559 MsG0780037655.01.T01:intron 40.0%
ACCATGTCTTTAGGCAATGT+GGG - Chr7:30370127-30370146 None:intergenic 40.0%
ACTAATGCAAGACCCATTCA+AGG + Chr7:30367374-30367393 MsG0780037655.01.T01:intron 40.0%
ACTAGCGAAAGACATATTCG+AGG + Chr7:30367406-30367425 MsG0780037655.01.T01:intron 40.0%
ACTGGAAAAAGGTTATAGGC+AGG - Chr7:30370235-30370254 None:intergenic 40.0%
AGATTGTTAGAATGACAGCC+CGG - Chr7:30367325-30367344 None:intergenic 40.0%
ATATAGACGGTTCAAAGGTG+AGG + Chr7:30367802-30367821 MsG0780037655.01.T01:intron 40.0%
ATGATGCAGAAGCAAACACT+TGG + Chr7:30369976-30369995 MsG0780037655.01.T01:intron 40.0%
ATGGTTCTCAACATACAAGC+CGG + Chr7:30370142-30370161 MsG0780037655.01.T01:intron 40.0%
ATTAGGCCAAAAGTAGGTTG+AGG + Chr7:30369513-30369532 MsG0780037655.01.T01:intron 40.0%
CAAACAACTCAGCCATTGAA+CGG + Chr7:30367665-30367684 MsG0780037655.01.T01:CDS 40.0%
CAATGGCTGAGTTGTTTGTT+AGG - Chr7:30367663-30367682 None:intergenic 40.0%
CAGATAGCCCTATGAAGTAT+AGG - Chr7:30372053-30372072 None:intergenic 40.0%
CAGATGCCCTATACTTCATA+GGG + Chr7:30372043-30372062 MsG0780037655.01.T01:three_prime_UTR 40.0%
CATCGTAGGTGTTAGATGAA+AGG + Chr7:30368554-30368573 MsG0780037655.01.T01:intron 40.0%
CATGCATTCGATGAGAAGTT+TGG + Chr7:30366871-30366890 MsG0780037655.01.T01:intron 40.0%
CATTGATACTACTACTCCTC+GGG - Chr7:30366235-30366254 None:intergenic 40.0%
CCAAAACAGTGCATAAGGTT+TGG + Chr7:30369313-30369332 MsG0780037655.01.T01:CDS 40.0%
CCAATGAGTGACTAATCTGA+GGG - Chr7:30367239-30367258 None:intergenic 40.0%
CCATTGATACTACTACTCCT+CGG - Chr7:30366236-30366255 None:intergenic 40.0%
CCTCTGCTTATAATAGTGAC+CGG - Chr7:30371172-30371191 None:intergenic 40.0%
CCTGGTTAAAGCAGTGATTT+GGG - Chr7:30367751-30367770 None:intergenic 40.0%
CTAGCGAAAGACATATTCGA+GGG + Chr7:30367407-30367426 MsG0780037655.01.T01:intron 40.0%
CTATACTTCATAGGGCTATC+TGG + Chr7:30372051-30372070 MsG0780037655.01.T01:three_prime_UTR 40.0%
CTATTCCGCTTTAGCAGTTT+CGG + Chr7:30369017-30369036 MsG0780037655.01.T01:intron 40.0%
CTGGTTAAAGCAGTGATTTG+GGG - Chr7:30367750-30367769 None:intergenic 40.0%
CTTCTCATCGAATGCATGTT+TGG - Chr7:30366869-30366888 None:intergenic 40.0%
CTTTGTTGAGTATGGCTCAT+AGG + Chr7:30366981-30367000 MsG0780037655.01.T01:intron 40.0%
GAAATGGCAGCTTGTATTTG+TGG + Chr7:30366150-30366169 MsG0780037655.01.T01:CDS 40.0%
GACATTATAGGACACAAAGG+TGG + Chr7:30371948-30371967 MsG0780037655.01.T01:three_prime_UTR 40.0%
GCGAATGGGTATATACACTT+GGG - Chr7:30369903-30369922 None:intergenic 40.0%
GGTCTTGCATTAGTTCAGTT+TGG - Chr7:30367368-30367387 None:intergenic 40.0%
GTATCACCGTTTCTATTGCA+TGG + Chr7:30370449-30370468 MsG0780037655.01.T01:intron 40.0%
GTTGAACAAACAGAGCCATT+GGG + Chr7:30367023-30367042 MsG0780037655.01.T01:intron 40.0%
TACCACTACTTAGCACCATA+AGG - Chr7:30371715-30371734 None:intergenic 40.0%
TAGGCAGGTATACTGGAAAA+AGG - Chr7:30370246-30370265 None:intergenic 40.0%
TATTCCGCTTTAGCAGTTTC+GGG + Chr7:30369018-30369037 MsG0780037655.01.T01:intron 40.0%
TCCAATGCCCTAAAGGTTAT+AGG - Chr7:30370265-30370284 None:intergenic 40.0%
TCCTGGTTAAAGCAGTGATT+TGG - Chr7:30367752-30367771 None:intergenic 40.0%
TCTATAAATCCTACTCCCTC+CGG + Chr7:30371150-30371169 MsG0780037655.01.T01:intron 40.0%
TGCACTGTTATACCCCTTTA+AGG + Chr7:30369653-30369672 MsG0780037655.01.T01:intron 40.0%
TGCGAATGGGTATATACACT+TGG - Chr7:30369904-30369923 None:intergenic 40.0%
TGCTTATAATAGTGACCGGA+GGG - Chr7:30371168-30371187 None:intergenic 40.0%
TTGAAATGCCCCATCTTACA+TGG + Chr7:30371543-30371562 MsG0780037655.01.T01:intron 40.0%
TTGAACAAACAGAGCCATTG+GGG + Chr7:30367024-30367043 MsG0780037655.01.T01:intron 40.0%
TTTGCGAGTTAGGTTTCGAA+GGG + Chr7:30369681-30369700 MsG0780037655.01.T01:intron 40.0%
! ACATACAAGCCGGTTTAGTA+AGG + Chr7:30370152-30370171 MsG0780037655.01.T01:intron 40.0%
! AGATTAGTCACTCATTGGGT+CGG + Chr7:30367241-30367260 MsG0780037655.01.T01:intron 40.0%
! ATGGGGCATTTCAAAGAAAG+CGG - Chr7:30371537-30371556 None:intergenic 40.0%
! CCAAACCTTATGCACTGTTT+TGG - Chr7:30369316-30369335 None:intergenic 40.0%
! CCTCAGATTAGTCACTCATT+GGG + Chr7:30367237-30367256 MsG0780037655.01.T01:intron 40.0%
! CTCTATTCCACTGCTATTTG+CGG - Chr7:30368743-30368762 None:intergenic 40.0%
! CTGTGTATTTGAGACGCTTT+GGG - Chr7:30366272-30366291 None:intergenic 40.0%
! GAAAGTGTAAAGGGAAGAAG+AGG - Chr7:30366330-30366349 None:intergenic 40.0%
! TCTGTGTATTTGAGACGCTT+TGG - Chr7:30366273-30366292 None:intergenic 40.0%
! TGGTTAAAGCAGTGATTTGG+GGG - Chr7:30367749-30367768 None:intergenic 40.0%
! TTCCTTATGGTGCTAAGTAG+TGG + Chr7:30371710-30371729 MsG0780037655.01.T01:intron 40.0%
!! CATTTGTGATGGATGTGAAC+GGG + Chr7:30370091-30370110 MsG0780037655.01.T01:intron 40.0%
!! CCATTTGTGATGGATGTGAA+CGG + Chr7:30370090-30370109 MsG0780037655.01.T01:intron 40.0%
!! TCTTGGTGATTTTTGCCAAG+TGG + Chr7:30368294-30368313 MsG0780037655.01.T01:intron 40.0%
!! TGGTTCTGACTCATGGAAAT+TGG + Chr7:30366419-30366438 MsG0780037655.01.T01:CDS 40.0%
!! TTCGATGAGAAGTTTGGTGT+TGG + Chr7:30366877-30366896 MsG0780037655.01.T01:intron 40.0%
!! TTGGGCTTTGTTTGTGAGTT+GGG - Chr7:30369885-30369904 None:intergenic 40.0%
!! TTTCCCTTTTGTTTGGGAAG+GGG - Chr7:30370518-30370537 None:intergenic 40.0%
!!! ACAAAGTGTGTTTTTCAGGG+TGG - Chr7:30369542-30369561 None:intergenic 40.0%
!!! ACCTCTATTTTCTGGCTATG+GGG + Chr7:30368863-30368882 MsG0780037655.01.T01:intron 40.0%
!!! AGTTGGGTTCTAGAGCATTT+TGG - Chr7:30369869-30369888 None:intergenic 40.0%
!!! CACCTCTATTTTCTGGCTAT+GGG + Chr7:30368862-30368881 MsG0780037655.01.T01:intron 40.0%
!!! CTTTTGAAACAAGGTGCTGT+TGG + Chr7:30366456-30366475 MsG0780037655.01.T01:CDS 40.0%
!!! TCACCTCTATTTTCTGGCTA+TGG + Chr7:30368861-30368880 MsG0780037655.01.T01:intron 40.0%
AAATGGCATCGTCAGGCATA+CGG - Chr7:30369381-30369400 None:intergenic 45.0%
AATGCCTCATTGCCTGAGAT+AGG - Chr7:30370041-30370060 None:intergenic 45.0%
ACAGATGAGAATCCTCCTAC+AGG - Chr7:30368836-30368855 None:intergenic 45.0%
ACCAGGTAGGCAATGCTTAA+CGG - Chr7:30368134-30368153 None:intergenic 45.0%
AGAAAACAGAGGCAAGAAGC+GGG - Chr7:30368902-30368921 None:intergenic 45.0%
AGACAGAGACTGTGATGTTC+AGG + Chr7:30368797-30368816 MsG0780037655.01.T01:intron 45.0%
AGCTGATACATATGGACCAG+AGG + Chr7:30370427-30370446 MsG0780037655.01.T01:CDS 45.0%
AGTTCCTGAACGAAGACGAA+TGG + Chr7:30370384-30370403 MsG0780037655.01.T01:CDS 45.0%
ATAAGGGTCCAATGCCCTAA+AGG - Chr7:30370272-30370291 None:intergenic 45.0%
ATGCCCTAAAGGTTATAGGC+AGG - Chr7:30370261-30370280 None:intergenic 45.0%
CAAACCCGAAACTGCTAAAG+CGG - Chr7:30369025-30369044 None:intergenic 45.0%
CAGATGAGAATCCTCCTACA+GGG - Chr7:30368835-30368854 None:intergenic 45.0%
CCAGATGCCCTATACTTCAT+AGG + Chr7:30372042-30372061 MsG0780037655.01.T01:three_prime_UTR 45.0%
CCCAAATCACTGCTTTAACC+AGG + Chr7:30367748-30367767 MsG0780037655.01.T01:intron 45.0%
CCCAATGAGTGACTAATCTG+AGG - Chr7:30367240-30367259 None:intergenic 45.0%
CCGAGGAGTAGTAGTATCAA+TGG + Chr7:30366233-30366252 MsG0780037655.01.T01:CDS 45.0%
CCGGTCACTATTATAAGCAG+AGG + Chr7:30371169-30371188 MsG0780037655.01.T01:intron 45.0%
CCGTTCACATCCATCACAAA+TGG - Chr7:30370093-30370112 None:intergenic 45.0%
CGAAAAGCCATGGAGGTTTA+TGG - Chr7:30366176-30366195 None:intergenic 45.0%
CGCAAATAGCAGTGGAATAG+AGG + Chr7:30368741-30368760 MsG0780037655.01.T01:intron 45.0%
CTCATAGGTACCTGAGAAGT+GGG + Chr7:30366996-30367015 MsG0780037655.01.T01:intron 45.0%
CTGCTGCCAAATATGCATCA+CGG + Chr7:30369341-30369360 MsG0780037655.01.T01:CDS 45.0%
CTGCTTATAATAGTGACCGG+AGG - Chr7:30371169-30371188 None:intergenic 45.0%
CTTAGCAGCGTTATTCCACT+TGG - Chr7:30368312-30368331 None:intergenic 45.0%
GAATACTTACAGGACCAGGT+AGG - Chr7:30368147-30368166 None:intergenic 45.0%
GAGAGAATACTTACAGGACC+AGG - Chr7:30368151-30368170 None:intergenic 45.0%
GAGTGGCATAAGATGCTAAG+CGG - Chr7:30368037-30368056 None:intergenic 45.0%
GCATTCGATGAGAAGTTTGG+TGG + Chr7:30366874-30366893 MsG0780037655.01.T01:intron 45.0%
GCGATAGCTGAGTAGAACTT+GGG + Chr7:30368662-30368681 MsG0780037655.01.T01:intron 45.0%
GGTTGAACAAACAGAGCCAT+TGG + Chr7:30367022-30367041 MsG0780037655.01.T01:intron 45.0%
GTGTGAACTTGACCTCACAT+GGG - Chr7:30371515-30371534 None:intergenic 45.0%
GTTTGCGAGTTAGGTTTCGA+AGG + Chr7:30369680-30369699 MsG0780037655.01.T01:intron 45.0%
TAACTACCTTTCCTTCCCGT+AGG - Chr7:30370942-30370961 None:intergenic 45.0%
TAAGCGGCTACAAGTAACAG+AGG - Chr7:30368021-30368040 None:intergenic 45.0%
TACATTGAAGCTGACCCATC+TGG + Chr7:30366399-30366418 MsG0780037655.01.T01:CDS 45.0%
TAGCCCCTTCCCAAACAAAA+GGG + Chr7:30370512-30370531 MsG0780037655.01.T01:intron 45.0%
TCATCCATTCGTCTTCGTTC+AGG - Chr7:30370391-30370410 None:intergenic 45.0%
TCCATATTAGCGGTCTCCAA+TGG - Chr7:30371035-30371054 None:intergenic 45.0%
TCCATGAGTCAGAACCAGAT+GGG - Chr7:30366416-30366435 None:intergenic 45.0%
TCCCACATTGCCTAAAGACA+TGG + Chr7:30370123-30370142 MsG0780037655.01.T01:intron 45.0%
TCCCCATAGCCAGAAAATAG+AGG - Chr7:30368867-30368886 None:intergenic 45.0%
TGCTCTGCTGTTGGAGAATT+AGG + Chr7:30367135-30367154 MsG0780037655.01.T01:intron 45.0%
TTAGCCCCTTCCCAAACAAA+AGG + Chr7:30370511-30370530 MsG0780037655.01.T01:intron 45.0%
TTCAGGGTCCAATTTCAGAC+TGG + Chr7:30371813-30371832 MsG0780037655.01.T01:intron 45.0%
TTCCATGAGTCAGAACCAGA+TGG - Chr7:30366417-30366436 None:intergenic 45.0%
TTGCGAGTTAGGTTTCGAAG+GGG + Chr7:30369682-30369701 MsG0780037655.01.T01:intron 45.0%
TTGGAGACCGCTAATATGGA+TGG + Chr7:30371035-30371054 MsG0780037655.01.T01:intron 45.0%
TTTGGTCATGTCAACCACAG+TGG - Chr7:30370905-30370924 None:intergenic 45.0%
TTTGTGGCCATAAACCTCCA+TGG + Chr7:30366166-30366185 MsG0780037655.01.T01:CDS 45.0%
! CCCTCAGATTAGTCACTCAT+TGG + Chr7:30367236-30367255 MsG0780037655.01.T01:intron 45.0%
! CCTATGAAGTATAGGGCATC+TGG - Chr7:30372045-30372064 None:intergenic 45.0%
! GCACTGACAGTGTATCAGTA+GGG - Chr7:30366488-30366507 None:intergenic 45.0%
! GGTTAAAGCAGTGATTTGGG+GGG - Chr7:30367748-30367767 None:intergenic 45.0%
! GTTAAAGCAGTGATTTGGGG+GGG - Chr7:30367747-30367766 None:intergenic 45.0%
! TCAGCAAACTGATGGTGAAG+AGG + Chr7:30371853-30371872 MsG0780037655.01.T01:CDS 45.0%
! TGGTCTCCTCAACCTACTTT+TGG - Chr7:30369522-30369541 None:intergenic 45.0%
! TTAAAGCAGTGATTTGGGGG+GGG - Chr7:30367746-30367765 None:intergenic 45.0%
!! AGCACTGACAGTGTATCAGT+AGG - Chr7:30366489-30366508 None:intergenic 45.0%
!! CTTGGGCTTTGTTTGTGAGT+TGG - Chr7:30369886-30369905 None:intergenic 45.0%
!! GCAAACACTTGGTCTTGATG+TGG + Chr7:30369987-30370006 MsG0780037655.01.T01:intron 45.0%
!! GCCTATAACCTTTAGGGCAT+TGG + Chr7:30370261-30370280 MsG0780037655.01.T01:intron 45.0%
!! GCTCTGAAGCTAATGCGAAT+GGG - Chr7:30369917-30369936 None:intergenic 45.0%
!! GCTTTAGCAGTTTCGGGTTT+GGG + Chr7:30369024-30369043 MsG0780037655.01.T01:intron 45.0%
!! TGCTCTGAAGCTAATGCGAA+TGG - Chr7:30369918-30369937 None:intergenic 45.0%
!! TGTTGATGGTGGTGTAAGAG+TGG + Chr7:30370870-30370889 MsG0780037655.01.T01:CDS 45.0%
!!! GGGTTCTAGAGCATTTTGGA+GGG - Chr7:30369865-30369884 None:intergenic 45.0%
!!! TGGGTTCTAGAGCATTTTGG+AGG - Chr7:30369866-30369885 None:intergenic 45.0%
!! AAAAAATTAAAAAATACTAT+GGG + Chr7:30368498-30368517 MsG0780037655.01.T01:intron 5.0%
!! TTGTAAAAATAAAAATAAAA+AGG + Chr7:30366590-30366609 MsG0780037655.01.T01:intron 5.0%
!!! TTTTTTATATTTTTAAAACT+TGG - Chr7:30367270-30367289 None:intergenic 5.0%
AACTGCAACTGCTCTGCTGT+TGG + Chr7:30367126-30367145 MsG0780037655.01.T01:intron 50.0%
AATTGCCTCCCAGAGTCCTA+CGG + Chr7:30370923-30370942 MsG0780037655.01.T01:CDS 50.0%
AGGTACCTGAGAAGTGGGTA+GGG + Chr7:30367001-30367020 MsG0780037655.01.T01:intron 50.0%
AGTTAGGTTTCGAAGGGGAG+GGG + Chr7:30369687-30369706 MsG0780037655.01.T01:intron 50.0%
ATACCTGCGTAGCCGTTCAA+TGG - Chr7:30367680-30367699 None:intergenic 50.0%
CTACTACTCCTCGGGATTTG+TGG - Chr7:30366227-30366246 None:intergenic 50.0%
GAGCAAAACCATGCATGGAC+TGG - Chr7:30367202-30367221 None:intergenic 50.0%
GAGTTAGGTTTCGAAGGGGA+GGG + Chr7:30369686-30369705 MsG0780037655.01.T01:intron 50.0%
GCAGTGGAATAGAGGCTGAA+TGG + Chr7:30368749-30368768 MsG0780037655.01.T01:intron 50.0%
GCCATTGGAGACCGCTAATA+TGG + Chr7:30371031-30371050 MsG0780037655.01.T01:intron 50.0%
GCGAGACACCATGTAAGATG+GGG - Chr7:30371554-30371573 None:intergenic 50.0%
GCTCATAGGTACCTGAGAAG+TGG + Chr7:30366995-30367014 MsG0780037655.01.T01:intron 50.0%
GCTGTTCTTGCGCTACCAAT+TGG + Chr7:30367850-30367869 MsG0780037655.01.T01:intron 50.0%
GCTTGACAAATGGCATCGTC+AGG - Chr7:30369388-30369407 None:intergenic 50.0%
GGCGAGACACCATGTAAGAT+GGG - Chr7:30371555-30371574 None:intergenic 50.0%
GGCGATAGCTGAGTAGAACT+TGG + Chr7:30368661-30368680 MsG0780037655.01.T01:intron 50.0%
GGGTCCAATTTCAGACTGGA+TGG + Chr7:30371817-30371836 MsG0780037655.01.T01:intron 50.0%
GGTGTGAACTTGACCTCACA+TGG - Chr7:30371516-30371535 None:intergenic 50.0%
GGTTCTCTGAATAGCCCTGT+AGG + Chr7:30368818-30368837 MsG0780037655.01.T01:intron 50.0%
GTAAATAGCCGGCTGCTACA+GGG - Chr7:30368775-30368794 None:intergenic 50.0%
TAATAGTGACCGGAGGGAGT+AGG - Chr7:30371162-30371181 None:intergenic 50.0%
TACACATCTGGGTTTCCGTG+TGG + Chr7:30368076-30368095 MsG0780037655.01.T01:CDS 50.0%
TAGGTACCTGAGAAGTGGGT+AGG + Chr7:30367000-30367019 MsG0780037655.01.T01:intron 50.0%
TATTAGCTAACCCGGCTCAC+AGG + Chr7:30371398-30371417 MsG0780037655.01.T01:intron 50.0%
TCAGCCTATCTCAGGCAATG+AGG + Chr7:30370034-30370053 MsG0780037655.01.T01:intron 50.0%
TCCATCACAAATGGTTGCCG+AGG - Chr7:30370084-30370103 None:intergenic 50.0%
TCTCTGAATAGCCCTGTAGG+AGG + Chr7:30368821-30368840 MsG0780037655.01.T01:intron 50.0%
TGGCGAGACACCATGTAAGA+TGG - Chr7:30371556-30371575 None:intergenic 50.0%
TGTAAATAGCCGGCTGCTAC+AGG - Chr7:30368776-30368795 None:intergenic 50.0%
TTCAACCCTACCCACTTCTC+AGG - Chr7:30367009-30367028 None:intergenic 50.0%
TTTCCTTCCCGTAGGACTCT+GGG - Chr7:30370934-30370953 None:intergenic 50.0%
TTTGTGGCCGCAAATAGCAG+TGG + Chr7:30368733-30368752 MsG0780037655.01.T01:intron 50.0%
! AGCTCGTGGGTTGAGTAGTA+TGG - Chr7:30371474-30371493 None:intergenic 50.0%
! CGATGAGAAGTTTGGTGGTC+AGG + Chr7:30366916-30366935 MsG0780037655.01.T01:intron 50.0%
! TAAAGCAGTGATTTGGGGGG+GGG - Chr7:30367745-30367764 None:intergenic 50.0%
! TAGGACTCTGGGAGGCAATT+TGG - Chr7:30370923-30370942 None:intergenic 50.0%
!! AAAGCGTCGAAAAGCCATGG+AGG - Chr7:30366183-30366202 None:intergenic 50.0%
!! ACCCATCTGGTTCTGACTCA+TGG + Chr7:30366412-30366431 MsG0780037655.01.T01:CDS 50.0%
!! CGCTTTAGCAGTTTCGGGTT+TGG + Chr7:30369023-30369042 MsG0780037655.01.T01:intron 50.0%
!! GAGAAAGCGTCGAAAAGCCA+TGG - Chr7:30366186-30366205 None:intergenic 50.0%
!! TTGTGATGGATGTGAACGGG+TGG + Chr7:30370094-30370113 MsG0780037655.01.T01:intron 50.0%
!! TTTCCGTGTGGTGATGGTCA+AGG + Chr7:30368088-30368107 MsG0780037655.01.T01:CDS 50.0%
AATCCAACCCACCTGTGAGC+CGG - Chr7:30371412-30371431 None:intergenic 55.0%
AGCGGTCTCCAATGGCACAA+TGG - Chr7:30371027-30371046 None:intergenic 55.0%
ATTGCCTCCCAGAGTCCTAC+GGG + Chr7:30370924-30370943 MsG0780037655.01.T01:CDS 55.0%
CAGAGTCCTACGGGAAGGAA+AGG + Chr7:30370933-30370952 MsG0780037655.01.T01:CDS 55.0%
CGAGTTAGGTTTCGAAGGGG+AGG + Chr7:30369685-30369704 MsG0780037655.01.T01:intron 55.0%
CTTTCCTTCCCGTAGGACTC+TGG - Chr7:30370935-30370954 None:intergenic 55.0%
GCCTCGGCAACCATTTGTGA+TGG + Chr7:30370080-30370099 MsG0780037655.01.T01:intron 55.0%
GCGGTCTCCAATGGCACAAT+GGG - Chr7:30371026-30371045 None:intergenic 55.0%
TCTGGGTTTCCGTGTGGTGA+TGG + Chr7:30368082-30368101 MsG0780037655.01.T01:CDS 55.0%
! AAAGCAGTGATTTGGGGGGG+GGG - Chr7:30367744-30367763 None:intergenic 55.0%
! GCCGTTAAGCATTGCCTACC+TGG + Chr7:30368130-30368149 MsG0780037655.01.T01:CDS 55.0%
! GCGCACTGACACGTCAAAAC+TGG + Chr7:30366685-30366704 MsG0780037655.01.T01:intron 55.0%
! TGGCCTTGACCATCACCACA+CGG - Chr7:30368094-30368113 None:intergenic 55.0%
!! AAATGGTTGCCGAGGCACTG+AGG - Chr7:30370076-30370095 None:intergenic 55.0%
!! AATGTGGTGCCATCGCTCGA+TGG - Chr7:30371586-30371605 None:intergenic 55.0%
AGCTAACCCGGCTCACAGGT+GGG + Chr7:30371402-30371421 MsG0780037655.01.T01:intron 60.0%
AGTGGCTCAGTCGTCCACTG+TGG + Chr7:30370888-30370907 MsG0780037655.01.T01:CDS 60.0%
ATCCAACCCACCTGTGAGCC+GGG - Chr7:30371411-30371430 None:intergenic 60.0%
CAGCCATTGAACGGCTACGC+AGG + Chr7:30367674-30367693 MsG0780037655.01.T01:CDS 60.0%
CCACGAAGCCACAAATCCCG+AGG + Chr7:30366216-30366235 MsG0780037655.01.T01:CDS 60.0%
CCTCGGGATTTGTGGCTTCG+TGG - Chr7:30366219-30366238 None:intergenic 60.0%
CTGAATGGCCCTGTAGCAGC+CGG + Chr7:30368764-30368783 MsG0780037655.01.T01:intron 60.0%
GTGTTGGGCCAGTCCATGCA+TGG + Chr7:30367191-30367210 MsG0780037655.01.T01:intron 60.0%
TAGCTAACCCGGCTCACAGG+TGG + Chr7:30371401-30371420 MsG0780037655.01.T01:intron 60.0%
TAGGTTTCGAAGGGGAGGGG+AGG + Chr7:30369690-30369709 MsG0780037655.01.T01:intron 60.0%
! AAGCAGTGATTTGGGGGGGG+GGG - Chr7:30367743-30367762 None:intergenic 60.0%
AACCCGGCTCACAGGTGGGT+TGG + Chr7:30371406-30371425 MsG0780037655.01.T01:intron 65.0%
CACACTCCGCCATCGAGCGA+TGG + Chr7:30371574-30371593 MsG0780037655.01.T01:intron 65.0%
CCTCCCAGAGTCCTACGGGA+AGG + Chr7:30370928-30370947 MsG0780037655.01.T01:CDS 65.0%
CCTTCCCGTAGGACTCTGGG+AGG - Chr7:30370931-30370950 None:intergenic 65.0%
TTCGAAGGGGAGGGGAGGAG+AGG + Chr7:30369695-30369714 MsG0780037655.01.T01:intron 65.0%
! AGCAGTGATTTGGGGGGGGG+GGG - Chr7:30367742-30367761 None:intergenic 65.0%
!! CATCGCTCGATGGCGGAGTG+TGG - Chr7:30371576-30371595 None:intergenic 65.0%
!! GTGGTGCCATCGCTCGATGG+CGG - Chr7:30371583-30371602 None:intergenic 65.0%
! GGGGGGGGGGGTGTAAAACG+TGG - Chr7:30367730-30367749 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 30366072 30372119 30366072 ID=MsG0780037655.01;Name=MsG0780037655.01
Chr7 mRNA 30366072 30372119 30366072 ID=MsG0780037655.01.T01;Parent=MsG0780037655.01;Name=MsG0780037655.01.T01;_AED=0.45;_eAED=0.45;_QI=75|1|1|1|0.75|0.77|9|221|299
Chr7 exon 30371818 30372119 30371818 ID=MsG0780037655.01.T01:exon:4672;Parent=MsG0780037655.01.T01
Chr7 exon 30370856 30370954 30370856 ID=MsG0780037655.01.T01:exon:4671;Parent=MsG0780037655.01.T01
Chr7 exon 30370379 30370448 30370379 ID=MsG0780037655.01.T01:exon:4670;Parent=MsG0780037655.01.T01
Chr7 exon 30369280 30369446 30369280 ID=MsG0780037655.01.T01:exon:4669;Parent=MsG0780037655.01.T01
Chr7 exon 30368034 30368156 30368034 ID=MsG0780037655.01.T01:exon:4668;Parent=MsG0780037655.01.T01
Chr7 exon 30367794 30367818 30367794 ID=MsG0780037655.01.T01:exon:4667;Parent=MsG0780037655.01.T01
Chr7 exon 30367642 30367695 30367642 ID=MsG0780037655.01.T01:exon:4666;Parent=MsG0780037655.01.T01
Chr7 exon 30366384 30366499 30366384 ID=MsG0780037655.01.T01:exon:4665;Parent=MsG0780037655.01.T01
Chr7 exon 30366072 30366311 30366072 ID=MsG0780037655.01.T01:exon:4664;Parent=MsG0780037655.01.T01
Chr7 five_prime_UTR 30366072 30366146 30366072 ID=MsG0780037655.01.T01:five_prime_utr;Parent=MsG0780037655.01.T01
Chr7 CDS 30366147 30366311 30366147 ID=MsG0780037655.01.T01:cds;Parent=MsG0780037655.01.T01
Chr7 CDS 30366384 30366499 30366384 ID=MsG0780037655.01.T01:cds;Parent=MsG0780037655.01.T01
Chr7 CDS 30367642 30367695 30367642 ID=MsG0780037655.01.T01:cds;Parent=MsG0780037655.01.T01
Chr7 CDS 30367794 30367818 30367794 ID=MsG0780037655.01.T01:cds;Parent=MsG0780037655.01.T01
Chr7 CDS 30368034 30368156 30368034 ID=MsG0780037655.01.T01:cds;Parent=MsG0780037655.01.T01
Chr7 CDS 30369280 30369446 30369280 ID=MsG0780037655.01.T01:cds;Parent=MsG0780037655.01.T01
Chr7 CDS 30370379 30370448 30370379 ID=MsG0780037655.01.T01:cds;Parent=MsG0780037655.01.T01
Chr7 CDS 30370856 30370954 30370856 ID=MsG0780037655.01.T01:cds;Parent=MsG0780037655.01.T01
Chr7 CDS 30371818 30371898 30371818 ID=MsG0780037655.01.T01:cds;Parent=MsG0780037655.01.T01
Chr7 three_prime_UTR 30371899 30372119 30371899 ID=MsG0780037655.01.T01:three_prime_utr;Parent=MsG0780037655.01.T01
Gene Sequence

>MsG0780037655.01.T01

ATGGAAATGGCAGCTTGTATTTGTGGCCATAAACCTCCATGGCTTTTCGACGCTTTCTCTCATTCAAAACCACGAAGCCACAAATCCCGAGGAGTAGTAGTATCAATGGTTATTAAACGAAGCCCAAAGCGTCTCAAATACACAGATAATACTCGCTTCAACAAGGATGGTGGTTTGGTTTACATTGAAGCTGACCCATCTGGTTCTGACTCATGGAAATTGGAATCAGTTGTTAATCTTTTGAAACAAGGTGCTGTTGGAGTCATCCCTACTGATACACTATATGCGATAGCATGTGACCTAACAAACAACTCAGCCATTGAACGGCTACGCAGAATCAAGAATATAGACGGTTCAAAGCCGCTTAGCATCTTATGCCACTCATTTAGCGACATAGATAAGTACACATCTGGGTTTCCGTGTGGTGATGGTCAAGGCCATGCAAATTTATTCAAAGCCGTTAAGCATTGCCTACCTGGTCCTTACACGTTCATCTTAATGGCTAGCAAAGCATTACCAAAACAGTGCATAAGGTTTGGGACTACTGCTGCCAAATATGCATCACGGAAAAATGTGGGTGTCCGTATGCCTGACGATGCCATTTGTCAAGCAATACTAAAGGAGATGAGTACACCATTAATATGTACAAGCATCAAGTTCCTGAACGAAGACGAATGGATGATTGATCCAGTTATGATAGCTGATACATATGGACCAGAGGGTCTTGATTTTGTTGTTGATGGTGGTGTAAGAGTGGCTCAGTCGTCCACTGTGGTTGACATGACCAAATTGCCTCCCAGAGTCCTACGGGAAGGAAAGGGTCCAATTTCAGACTGGATGGTATTGGAAGATAATCAGCAAACTGATGGTGAAGAGGATCTGATCCCTGCTGCCATTTGA

Protein sequence

>MsG0780037655.01.T01

MEMAACICGHKPPWLFDAFSHSKPRSHKSRGVVVSMVIKRSPKRLKYTDNTRFNKDGGLVYIEADPSGSDSWKLESVVNLLKQGAVGVIPTDTLYAIACDLTNNSAIERLRRIKNIDGSKPLSILCHSFSDIDKYTSGFPCGDGQGHANLFKAVKHCLPGPYTFILMASKALPKQCIRFGTTAAKYASRKNVGVRMPDDAICQAILKEMSTPLICTSIKFLNEDEWMIDPVMIADTYGPEGLDFVVDGGVRVAQSSTVVDMTKLPPRVLREGKGPISDWMVLEDNQQTDGEEDLIPAAI*