AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580024766.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024766.01.T02 MTR_5g016110 95.833 96 4 0 64 159 438 533 1.54e-65 209
MsG0580024766.01.T02 MTR_5g016110 98.039 51 1 0 1 51 209 259 5.86e-27 105
MsG0580024766.01.T02 MTR_5g016110 95.833 96 4 0 64 159 380 475 2.31e-65 207
MsG0580024766.01.T02 MTR_5g016110 98.039 51 1 0 1 51 151 201 7.18e-27 105
MsG0580024766.01.T02 MTR_5g016110 96.809 94 3 0 64 157 438 531 5.04e-64 206
MsG0580024766.01.T02 MTR_5g016110 98.039 51 1 0 1 51 209 259 7.92e-27 105
MsG0580024766.01.T01 MTR_5g016110 95.833 96 4 0 64 159 438 533 1.54e-65 209
MsG0580024766.01.T01 MTR_5g016110 98.039 51 1 0 1 51 209 259 5.86e-27 105
MsG0580024766.01.T01 MTR_5g016110 95.833 96 4 0 64 159 380 475 2.31e-65 207
MsG0580024766.01.T01 MTR_5g016110 98.039 51 1 0 1 51 151 201 7.18e-27 105
MsG0580024766.01.T01 MTR_5g016110 96.809 94 3 0 64 157 438 531 5.04e-64 206
MsG0580024766.01.T01 MTR_5g016110 98.039 51 1 0 1 51 209 259 7.92e-27 105
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024766.01.T02 AT4G37480 58.333 96 40 0 64 159 430 525 2.65e-36 131
MsG0580024766.01.T02 AT4G37480 68.519 54 17 0 1 54 205 258 1.57e-16 76.3
MsG0580024766.01.T01 AT4G37480 58.333 96 40 0 64 159 430 525 2.65e-36 131
MsG0580024766.01.T01 AT4G37480 68.519 54 17 0 1 54 205 258 1.57e-16 76.3

Find 213 sgRNAs with CRISPR-Local

Find 417 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGCAATATCAAAGTTTATT+TGG 0.161545 5:-9388868 MsG0580024766.01.T02:three_prime_UTR
CATTAAAAGTTTCAATGATA+TGG 0.169392 5:-9390866 MsG0580024766.01.T01:three_prime_UTR
GAGACATTCAGTTCAGTATT+TGG 0.178645 5:+9391687 None:intergenic
ACATCCCAATCATTTCATTA+TGG 0.179235 5:+9389693 MsG0580024764.01.T01:CDS
GATCTTTAGTTATCTATTTC+AGG 0.204542 5:-9391202 MsG0580024766.01.T01:intron
CATTAAAGTTAAGGCATAAA+AGG 0.225823 5:+9388696 MsG0580024763.01.T01:five_prime_UTR
TTGATATTGCATGGGGTAAT+AGG 0.263515 5:+9388879 MsG0580024763.01.T01:intron
ACTCATTAAGCTGAATAATT+AGG 0.265114 5:+9390549 MsG0580024764.01.T01:intron
CTGTGTTGATGTTACCTTAC+AGG 0.274078 5:+9389566 MsG0580024764.01.T01:CDS
GTAAATCTACACCTTGAATA+TGG 0.283254 5:-9390125 MsG0580024766.01.T02:three_prime_UTR
TGTCAGCTCCTAGTTTATTA+TGG 0.285048 5:+9391414 None:intergenic
GGAATATGTCATGGTCTAAT+AGG 0.286210 5:+9389206 MsG0580024763.01.T01:intron
AGTCATTGTGTAGTTGTAAA+TGG 0.293527 5:+9391824 None:intergenic
TATTCAAGGTGTAGATTTAC+TGG 0.295017 5:+9390128 MsG0580024764.01.T01:CDS
CATCCCAATCATTTCATTAT+GGG 0.296642 5:+9389694 MsG0580024764.01.T01:CDS
AACCTATTGTTTATTCTCTC+TGG 0.302779 5:-9390257 MsG0580024766.01.T02:three_prime_UTR
TAAAAGAAAGTATCAGAAAA+AGG 0.308089 5:+9388969 MsG0580024763.01.T01:intron
TGAAAACAACCTTGCTTTGT+TGG 0.310340 5:+9388518 MsG0580024763.01.T01:five_prime_UTR
ACAACTACACAATGACTCTT+TGG 0.311464 5:-9391818 MsG0580024765.01.T01:CDS
TTCCTGGTGCTGTGGTCTAT+TGG 0.311655 5:-9391710 MsG0580024765.01.T01:CDS
TAGGATCTGCAAAGAGAAAT+AGG 0.321522 5:-9390463 MsG0580024766.01.T01:three_prime_UTR
AACGAACCATGGTTGCTTCC+CGG 0.333037 5:-9388629 MsG0580024766.01.T02:three_prime_UTR
ATTAAAAGTTTCAATGATAT+GGG 0.337189 5:-9390865 MsG0580024766.01.T01:three_prime_UTR
TGTTACATTTCGCAACTCTA+TGG 0.339497 5:+9391113 None:intergenic
GCAAGCAGTCTATTCAAAAT+TGG 0.340848 5:+9390327 MsG0580024764.01.T01:intron
GCTGTATTCATGGGGAGAAC+TGG 0.347057 5:+9389260 MsG0580024763.01.T01:CDS
TTTACTTTGACTACGTTGAA+TGG 0.353446 5:-9391165 MsG0580024766.01.T01:intron
CTAAAGCTTGCAGCTGCAAT+TGG 0.364895 5:-9389348 MsG0580024766.01.T02:three_prime_UTR
AAGTATATGTGTATAATGAT+TGG 0.365954 5:+9389397 MsG0580024763.01.T01:CDS
CTGTTTATCTGCCTATATAC+TGG 0.369110 5:-9391272 MsG0580024766.01.T01:intron
ACGGGTTTCCATTAAAGTTA+AGG 0.374992 5:+9388687 MsG0580024763.01.T01:five_prime_UTR
AAATTCGCACTTACTCTAGA+AGG 0.375714 5:-9389372 MsG0580024766.01.T02:three_prime_UTR
GGAGAAACAAGTGGATCTTC+AGG 0.375718 5:+9388729 MsG0580024763.01.T01:CDS
TGATTGTCTTGAGGATATAT+TGG 0.376726 5:+9389643 MsG0580024764.01.T01:CDS
GCAAGTTCCATATGCATGTT+AGG 0.378055 5:+9391309 None:intergenic
AGACATTAGACACCACATTC+TGG 0.381155 5:-9389848 MsG0580024766.01.T02:three_prime_UTR
GATCCCCATAATGAAATGAT+TGG 0.381828 5:-9389698 MsG0580024766.01.T02:three_prime_UTR
ATATTAGAGTATGTATTTCA+TGG 0.383660 5:+9389026 MsG0580024763.01.T01:intron
TGCTTCAGCAATTTAACAAC+TGG 0.384909 5:-9390649 MsG0580024766.01.T01:three_prime_UTR
TCCTAGTTTATTATGGTAAA+GGG 0.385624 5:+9391421 None:intergenic
TTTAGGCATTTGTAAAGGTA+TGG 0.391330 5:+9391512 None:intergenic
CTCCTAGTTTATTATGGTAA+AGG 0.391688 5:+9391420 None:intergenic
TACCATCCACTTTCTTCATA+AGG 0.394550 5:-9389987 MsG0580024766.01.T02:three_prime_UTR
GGAGAAGGAAGAGGAGGAAA+AGG 0.396271 5:-9388484 MsG0580024766.01.T02:three_prime_UTR
GATCCTCCCATTTGCAGTAC+TGG 0.400519 5:-9391028 MsG0580024766.01.T01:intron
TATAACATTTCATGCTAACT+TGG 0.402374 5:+9389185 MsG0580024763.01.T01:intron
CATACCGGTCTTTGCTCAAA+AGG 0.406196 5:-9388786 MsG0580024766.01.T02:three_prime_UTR
GGGTCGTTCTTTCTTCGCCT+TGG 0.406243 5:+9389288 MsG0580024763.01.T01:CDS
TAACTAATAGAATAATGCTT+TGG 0.406729 5:-9391136 MsG0580024766.01.T01:intron
AAATAAAGACTCCAGTATAT+AGG 0.407877 5:+9391261 None:intergenic
TCATTTCATTATGGGGATCA+TGG 0.410863 5:+9389702 MsG0580024764.01.T01:CDS
TCATGGGGAGAACTGGGTCC+AGG 0.410922 5:+9389267 MsG0580024763.01.T01:CDS
TGCTAAAGTAAAGAACAAAA+AGG 0.411381 5:+9391051 None:intergenic
ACTAGCTTCCGTGCCTTGCC+TGG 0.417609 5:-9391652 MsG0580024765.01.T01:CDS
GTGGATCTTCAGGAGGTAGC+TGG 0.417633 5:+9388739 MsG0580024763.01.T01:CDS
TTGCTGAAGCAAACTCTAGT+TGG 0.417913 5:+9390661 MsG0580024764.01.T01:intron
GAGCTTCAAAATTTCTCAAC+GGG 0.420370 5:+9388669 MsG0580024763.01.T01:five_prime_UTR
TCTTGCAGCTGCTGCTGCTG+AGG 0.421207 5:+9390947 MsG0580024764.01.T01:CDS
TTCAGTTTGTATGTGTGTGC+AGG 0.425347 5:-9389095 MsG0580024766.01.T02:three_prime_UTR
CACATATATTCCTTGTCTCC+AGG 0.433647 5:+9390621 MsG0580024764.01.T01:intron
GTACTCGACAAATCAATTAC+TGG 0.434361 5:+9390172 MsG0580024764.01.T01:intron
AACTGCAAGACAAACTAAAC+CGG 0.436110 5:+9388610 MsG0580024763.01.T01:five_prime_UTR
CAAGATCCTACAATATCTTC+AGG 0.438443 5:+9390834 MsG0580024764.01.T01:CDS
GCTGCTGCTGAGGCTGCAGA+TGG 0.438479 5:+9390957 MsG0580024764.01.T01:CDS
CAGGAGGCCAGTACTGCAAA+TGG 0.438936 5:+9391021 MsG0580024764.01.T01:CDS
TTCTTCGCCTTGGAGGTCTC+TGG 0.439796 5:+9389298 MsG0580024763.01.T01:CDS
TTTATACTAGCTGCTGGAAC+AGG 0.441314 5:+9389600 MsG0580024764.01.T01:CDS
TGTCATGCTTTCTGATGGCT+TGG 0.442179 5:-9389054 MsG0580024766.01.T02:three_prime_UTR
TTGTACTTTGTGTTGACCTT+GGG 0.445992 5:-9390795 MsG0580024766.01.T01:intron
CCTAGCTCGTGATAGATTGT+TGG 0.448412 5:+9390482 MsG0580024764.01.T01:intron
AGTACTGAAAGGTAAATTAG+AGG 0.449856 5:-9391781 MsG0580024765.01.T01:CDS
TAAATATGTATAATCTTATC+CGG 0.450407 5:-9391349 MsG0580024766.01.T01:intron
GGGTAATAGGATATTCCCTT+TGG 0.452798 5:+9388892 MsG0580024763.01.T01:intron
CTAGCTCGTGATAGATTGTT+GGG 0.458803 5:+9390483 MsG0580024764.01.T01:intron
AACTGTGGTTAAGAAATTAA+CGG 0.459238 5:+9389909 MsG0580024764.01.T01:intron
GGGACTTCAATTTCCAATCC+AGG 0.460451 5:-9388765 MsG0580024766.01.T02:three_prime_UTR
CATTTCATTATGGGGATCAT+GGG 0.460452 5:+9389703 MsG0580024764.01.T01:CDS
AAATAAACTTTGATATTGCA+TGG 0.460714 5:+9388870 MsG0580024763.01.T01:intron
CAGTATATAGGCAGATAAAC+AGG 0.461166 5:+9391273 None:intergenic
AGTATATGTGTATAATGATT+GGG 0.461202 5:+9389398 MsG0580024763.01.T01:CDS
GGTTTAGTTTGTCTTGCAGT+TGG 0.461505 5:-9388608 MsG0580024766.01.T02:three_prime_UTR
CTTCTGTCCTAACATGCATA+TGG 0.461570 5:-9391316 MsG0580024766.01.T01:intron
GAGAGAATAAACAATAGGTT+AGG 0.463366 5:+9390260 MsG0580024764.01.T01:intron
TCAGGAGGTAGCTGGGATCC+TGG 0.464576 5:+9388747 MsG0580024763.01.T01:CDS
ACCTGCGCAAACCATATTCA+AGG 0.464691 5:+9390114 MsG0580024764.01.T01:CDS
TTGGCAGTGTTCACAGTGCT+TGG 0.468253 5:+9389321 MsG0580024763.01.T01:CDS
GTCCAGAGAGAATAAACAAT+AGG 0.472179 5:+9390255 MsG0580024764.01.T01:intron
ACTGTGGTTAAGAAATTAAC+GGG 0.472617 5:+9389910 MsG0580024764.01.T01:intron
AGGATGGAATGCTGTATTCA+TGG 0.479665 5:+9389250 MsG0580024763.01.T01:CDS
AAGCTGAATAATTAGGATGC+AGG 0.484440 5:+9390556 MsG0580024764.01.T01:intron
TAGATTGTTGGGCTCTTACA+AGG 0.485638 5:+9390494 MsG0580024764.01.T01:intron
GTCTTTAAAATTGTAAGAGA+TGG 0.487080 5:+9390290 MsG0580024764.01.T01:intron
AACCTATCTCTACAGTATAC+TGG 0.487242 5:-9390984 MsG0580024766.01.T01:intron
GAAGGAAGAGGAGGAAAAGG+AGG 0.488611 5:-9388481 MsG0580024766.01.T02:three_prime_UTR
ACTGGAGCATTGCTTGTCAC+TGG 0.490569 5:+9390685 MsG0580024764.01.T01:intron
TGCTGAAGCAAACTCTAGTT+GGG 0.491191 5:+9390662 MsG0580024764.01.T01:intron
AATAAACTTTGATATTGCAT+GGG 0.495057 5:+9388871 MsG0580024763.01.T01:intron
GGCATAAAAGGTGAGATGAA+TGG 0.498108 5:+9388708 MsG0580024763.01.T01:exon
TTAGGCATTTGTAAAGGTAT+GGG 0.498863 5:+9391513 None:intergenic
TCTTTACTTGGAGAAGGAAG+AGG 0.499084 5:-9388493 MsG0580024766.01.T02:three_prime_UTR
TCGTTCTTTCTTCGCCTTGG+AGG 0.501822 5:+9389291 MsG0580024763.01.T01:CDS
CACAAAGTACAACCTAAGTA+AGG 0.503451 5:+9390806 MsG0580024764.01.T01:CDS
TTCAATTCTTTACTTGGAGA+AGG 0.504464 5:-9388499 MsG0580024766.01.T02:three_prime_UTR
AAGAGAAGAATGAATCTTTG+TGG 0.504529 5:-9391564 MsG0580024766.01.T01:intron
AGTACTCCTGAAGATATTGT+AGG 0.504834 5:-9390840 MsG0580024766.01.T01:intron
CTAACTGTCATGCTTTCTGA+TGG 0.506642 5:-9389059 MsG0580024766.01.T02:three_prime_UTR
AATTAACGGGATCACAATGC+AGG 0.506658 5:+9389923 MsG0580024764.01.T01:CDS
GTTGTACTTTGTGTTGACCT+TGG 0.506897 5:-9390796 MsG0580024766.01.T01:intron
CTGTATTCATGGGGAGAACT+GGG 0.507278 5:+9389261 MsG0580024763.01.T01:CDS
AACAAAATCATATGATGTGA+AGG 0.511103 5:+9391237 None:intergenic
TTAGATAAAGACAAGACCAT+TGG 0.511125 5:+9390199 MsG0580024764.01.T01:intron
GTCATTCCTTATGAAGAAAG+TGG 0.511705 5:+9389981 MsG0580024764.01.T01:CDS
TCGTCCGCTTTCACATCTGC+AGG 0.511726 5:-9390921 MsG0580024766.01.T01:three_prime_UTR
CTCACGTAGTCTTATCTACA+TGG 0.518385 5:-9391757 MsG0580024765.01.T01:CDS
GGACAGAAGTCCGTGGAAGC+CGG 0.518517 5:+9391330 None:intergenic
TTTATTGCATTTAACCTAGT+GGG 0.521492 5:+9389788 MsG0580024764.01.T01:intron
CTGAGATTTATACTAGCTGC+TGG 0.524640 5:+9389594 MsG0580024764.01.T01:CDS
AAATGAGTACTCATCTTTGA+AGG 0.527068 5:+9389230 MsG0580024763.01.T01:CDS
ACTGAACTGAATGTCTCAAT+CGG 0.527821 5:-9391681 MsG0580024765.01.T01:CDS
ATCCCCATAATGAAATGATT+GGG 0.533240 5:-9389697 MsG0580024766.01.T02:three_prime_UTR
AAGCAAACTCTAGTTGGGAC+TGG 0.534146 5:+9390667 MsG0580024764.01.T01:intron
GGCCAATAGACCACAGCACC+AGG 0.535402 5:+9391708 None:intergenic
AAATCTCAGAGGTTCCTGTA+AGG 0.537507 5:-9389580 MsG0580024766.01.T02:three_prime_UTR
GGACATTTAGGCATTTGTAA+AGG 0.537925 5:+9391507 None:intergenic
GACCAGTATACTGTAGAGAT+AGG 0.539279 5:+9390982 MsG0580024764.01.T01:CDS
TGGGGATCATGGGGTGAGCA+AGG 0.539398 5:+9389713 MsG0580024764.01.T01:intron
AAAGACAAGACCATTGGTAA+AGG 0.540144 5:+9390205 MsG0580024764.01.T01:intron
CTGAATGTCTCAATCGGTCA+AGG 0.541047 5:-9391675 MsG0580024765.01.T01:CDS
ATTTAACAACTGGTTTAACC+TGG 0.541170 5:-9390639 MsG0580024766.01.T01:three_prime_UTR
GTAAATAATATATGTGGTCA+TGG 0.541286 5:+9388368 None:intergenic
CACACACATACAAACTGAAA+CGG 0.543210 5:+9389099 MsG0580024763.01.T01:intron
AGGTAGCTGGGATCCTGGAT+TGG 0.543722 5:+9388752 MsG0580024763.01.T01:CDS
ATCCCAATCATTTCATTATG+GGG 0.544243 5:+9389695 MsG0580024764.01.T01:CDS
TGGATCTTCAGGAGGTAGCT+GGG 0.548745 5:+9388740 MsG0580024763.01.T01:CDS
TTGTGTCTTTGATTGTCTTG+AGG 0.548909 5:+9389634 MsG0580024764.01.T01:CDS
GAGTACTCATCTTTGAAGGA+TGG 0.549927 5:+9389234 MsG0580024763.01.T01:CDS
TCCCTTTACCATAATAAACT+AGG 0.550803 5:-9391422 MsG0580024766.01.T01:intron
ACCTTGAATATGGTTTGCGC+AGG 0.551319 5:-9390115 MsG0580024766.01.T02:three_prime_UTR
GTTGACCTTGGGAACTTGAA+CGG 0.554757 5:-9390784 MsG0580024766.01.T01:intron
AACTATCTCCAGGCAAGGCA+CGG 0.555303 5:+9391644 None:intergenic
TTCTTCGTTATTATAACACA+TGG 0.555929 5:-9391377 MsG0580024766.01.T01:intron
CTTTATTGCATTTAACCTAG+TGG 0.556661 5:+9389787 MsG0580024764.01.T01:intron
AGAGTGTTCGTGACTACAGA+AGG 0.557643 5:-9389816 MsG0580024766.01.T02:three_prime_UTR
ATACCGGTCTTTGCTCAAAA+GGG 0.558808 5:-9388785 MsG0580024766.01.T02:three_prime_UTR
CTCAAATTAGCCTTTACCAA+TGG 0.559646 5:-9390215 MsG0580024766.01.T02:three_prime_UTR
CGTAGTCTTATCTACATGGT+TGG 0.560674 5:-9391753 MsG0580024765.01.T01:CDS
AGGAGGCCAGTACTGCAAAT+GGG 0.560894 5:+9391022 MsG0580024764.01.T01:CDS
ATAGAAAGGAGGATAAAATG+AGG 0.561994 5:+9388939 MsG0580024763.01.T01:intron
TGCTAACTTGGAATATGTCA+TGG 0.564573 5:+9389197 MsG0580024763.01.T01:intron
CCAACAATCTATCACGAGCT+AGG 0.567433 5:-9390482 MsG0580024766.01.T01:three_prime_UTR
ATTTATCTTTGCTACACCAG+TGG 0.569868 5:+9390717 MsG0580024764.01.T01:intron
ATAATAACGAAGAAAACTAC+AGG 0.573134 5:+9391386 None:intergenic
AGCTGAATAATTAGGATGCA+GGG 0.573724 5:+9390557 MsG0580024764.01.T01:intron
TCGCCTTGGAGGTCTCTGGT+TGG 0.574053 5:+9389302 MsG0580024763.01.T01:CDS
AATGTTGTGCAACTATCTCC+AGG 0.574675 5:+9391634 None:intergenic
TTACTTGGAGAAGGAAGAGG+AGG 0.575146 5:-9388490 MsG0580024766.01.T02:three_prime_UTR
GAAGAAAGTGGATGGTATGA+CGG 0.576103 5:+9389993 MsG0580024764.01.T01:CDS
TCTCTTGCATAACAATTCTG+AGG 0.578025 5:+9391581 None:intergenic
ATATATTATTTACGTGGAGG+AGG 0.581209 5:-9388358 MsG0580024766.01.T02:three_prime_UTR
ATAATCTTATCCGGCTTCCA+CGG 0.583764 5:-9391340 MsG0580024766.01.T01:intron
GGATGGAATGCTGTATTCAT+GGG 0.587098 5:+9389251 MsG0580024763.01.T01:CDS
CATGGGGAGAACTGGGTCCA+GGG 0.587436 5:+9389268 MsG0580024763.01.T01:CDS
CTCCACGTAAATAATATATG+TGG 0.592160 5:+9388362 None:intergenic
AGAGCTTCAAAATTTCTCAA+CGG 0.592707 5:+9388668 MsG0580024763.01.T01:five_prime_UTR
TCAGTTTGTATGTGTGTGCA+GGG 0.593093 5:-9389094 MsG0580024766.01.T02:three_prime_UTR
AAAGAACAGAGATAGAAAGG+AGG 0.596475 5:+9388928 MsG0580024763.01.T01:intron
ATGAGTAAACCAACAAAGCA+AGG 0.599136 5:-9388527 MsG0580024766.01.T02:three_prime_UTR
ATTAACGGGATCACAATGCA+GGG 0.599163 5:+9389924 MsG0580024764.01.T01:CDS
ATAAACTTTGATATTGCATG+GGG 0.606577 5:+9388872 MsG0580024763.01.T01:intron
ATCAACCGTTCAAGTTCCCA+AGG 0.607453 5:+9390779 MsG0580024764.01.T01:CDS
TTCCTTATGAAGAAAGTGGA+TGG 0.609524 5:+9389985 MsG0580024764.01.T01:CDS
TTAAAAGTTTCAATGATATG+GGG 0.610051 5:-9390864 MsG0580024766.01.T01:three_prime_UTR
ATGCAGGGGTGGAGTTATGT+TGG 0.613989 5:+9389939 MsG0580024764.01.T01:CDS
GCGCAGGTGAAGTCTTCAGA+GGG 0.615121 5:-9390099 MsG0580024766.01.T02:three_prime_UTR
ATTCAAGGTGTAGATTTACT+GGG 0.616830 5:+9390129 MsG0580024764.01.T01:CDS
GATATTCCCTTTGGACTGAG+AGG 0.619733 5:+9388901 MsG0580024763.01.T01:intron
AGGCGAAGAAAGAACGACCC+TGG 0.620568 5:-9389285 MsG0580024766.01.T02:three_prime_UTR
TGCGCAGGTGAAGTCTTCAG+AGG 0.620722 5:-9390100 MsG0580024766.01.T02:three_prime_UTR
GATGCTCTGCTAGTACTGAA+AGG 0.620747 5:-9391792 MsG0580024765.01.T01:CDS
ACTAAACCGGGAAGCAACCA+TGG 0.621555 5:+9388623 MsG0580024763.01.T01:five_prime_UTR
ACTGGTTTAACCTGGAGACA+AGG 0.622281 5:-9390631 MsG0580024766.01.T01:three_prime_UTR
ACGGGATCACAATGCAGGGG+TGG 0.622766 5:+9389928 MsG0580024764.01.T01:CDS
AGAATGAAGAAATTCTCCAC+TGG 0.626300 5:-9390733 MsG0580024766.01.T01:three_prime_UTR
CACATATATTATTTACGTGG+AGG 0.629590 5:-9388361 MsG0580024766.01.T02:three_prime_UTR
TGTGTAGTTGTAAATGGACA+AGG 0.632034 5:+9391830 None:intergenic
GAGAGTTAAGAGAGTAACCT+CGG 0.636337 5:-9390035 MsG0580024766.01.T02:three_prime_UTR
GACCACATATATTATTTACG+TGG 0.640165 5:-9388364 MsG0580024766.01.T02:three_prime_UTR
GAAAGGAGGATAAAATGAGG+AGG 0.640811 5:+9388942 MsG0580024763.01.T01:intron
TAATGTGTACTGTAGAAAGG+AGG 0.641199 5:+9390884 MsG0580024764.01.T01:CDS
TTTGGATGATGAACGAACCA+TGG 0.644971 5:-9388640 MsG0580024766.01.T02:three_prime_UTR
TTTACTGGGACATAGCAAGT+AGG 0.646061 5:+9390143 MsG0580024764.01.T01:intron
ACTGCAAGACAAACTAAACC+GGG 0.646464 5:+9388611 MsG0580024763.01.T01:five_prime_UTR
ATTTCATTATGGGGATCATG+GGG 0.646922 5:+9389704 MsG0580024764.01.T01:CDS
GTAGTTGTCTACATACATAC+CGG 0.646983 5:-9388801 MsG0580024766.01.T02:three_prime_UTR
ATTGCCTGCAGATGTGAAAG+CGG 0.647332 5:+9390917 MsG0580024764.01.T01:CDS
TCTATGTTGTTGCCAGAATG+TGG 0.649982 5:+9389836 MsG0580024764.01.T01:intron
TGTGCAACTATCTCCAGGCA+AGG 0.650202 5:+9391639 None:intergenic
ATAGATAACTAAAGATCACA+TGG 0.650379 5:+9391208 None:intergenic
ATGGTATGACGGACAGATGT+GGG 0.654790 5:+9390004 MsG0580024764.01.T01:CDS
GAGATGAATGGAGAAACAAG+TGG 0.659434 5:+9388720 MsG0580024763.01.T01:exon
TACAGAAGGGAGTTCCCACT+AGG 0.662375 5:-9389802 MsG0580024766.01.T02:three_prime_UTR
CATGTAGATAAGACTACGTG+AGG 0.664067 5:+9391758 None:intergenic
GAGTGTTCGTGACTACAGAA+GGG 0.676854 5:-9389815 MsG0580024766.01.T02:three_prime_UTR
CTGCCAACCAGAGACCTCCA+AGG 0.677013 5:-9389305 MsG0580024766.01.T02:three_prime_UTR
AGGCCAGTACTGCAAATGGG+AGG 0.682389 5:+9391025 MsG0580024764.01.T01:CDS
CATGTTAGGACAGAAGTCCG+TGG 0.685051 5:+9391323 None:intergenic
GATGGTATGACGGACAGATG+TGG 0.687282 5:+9390003 MsG0580024764.01.T01:CDS
GATGGAATGCTGTATTCATG+GGG 0.687693 5:+9389252 MsG0580024763.01.T01:CDS
GAAACAAGTGGATCTTCAGG+AGG 0.690118 5:+9388732 MsG0580024763.01.T01:CDS
TTAACGGGATCACAATGCAG+GGG 0.713831 5:+9389925 MsG0580024764.01.T01:CDS
GCAGCTAGTATAAATCTCAG+AGG 0.718109 5:-9389591 MsG0580024766.01.T02:three_prime_UTR
AGATGTGGGTCAAGCCACCG+AGG 0.732791 5:+9390018 MsG0580024764.01.T01:CDS
AGTTAAGAGAGTAACCTCGG+TGG 0.783943 5:-9390032 MsG0580024766.01.T02:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTAATACTGTTAATATT+AGG - Chr5:9390353-9390372 MsG0580024766.01.T01:three_prime_UTR 10.0%
!! CAAAAATAATTACAAATAAT+TGG + Chr5:9394276-9394295 None:intergenic 10.0%
!! AAAACAAAAATTGTTCATAT+TGG - Chr5:9391189-9391208 MsG0580024766.01.T01:intron 15.0%
!! AATCAAAATTTGCATTTATT+TGG - Chr5:9390070-9390089 MsG0580024766.01.T02:three_prime_UTR 15.0%
!! ATGAGAAAAAATCAAAATAT+TGG + Chr5:9393682-9393701 None:intergenic 15.0%
!! ATTAAAAGTTTCAATGATAT+GGG - Chr5:9391807-9391826 MsG0580024765.01.T01:CDS 15.0%
!! ATTCTTATAAAGTTAAAAGA+AGG + Chr5:9389931-9389950 MsG0580024764.01.T01:CDS 15.0%
!! TAAATATGTATAATCTTATC+CGG - Chr5:9391323-9391342 MsG0580024766.01.T01:intron 15.0%
!!! AATATGAACAATTTTTGTTT+TGG + Chr5:9391190-9391209 None:intergenic 15.0%
!!! ATATGAACAATTTTTGTTTT+GGG + Chr5:9391189-9391208 None:intergenic 15.0%
!!! GCATACATTTTTTTTTTTTT+TGG - Chr5:9393211-9393230 MsG0580024765.01.T01:intron 15.0%
!!! TATAAGAAACATTTTTTAGT+GGG - Chr5:9393506-9393525 MsG0580024765.01.T01:CDS 15.0%
!!! TTATAAGAAACATTTTTTAG+TGG - Chr5:9393505-9393524 MsG0580024765.01.T01:CDS 15.0%
!! AAAACATTTAGAAATGCTAT+TGG - Chr5:9390651-9390670 MsG0580024766.01.T01:three_prime_UTR 20.0%
!! AAATAAACTTTGATATTGCA+TGG + Chr5:9393805-9393824 None:intergenic 20.0%
!! AAGGGGTTAATATTATTAAA+AGG + Chr5:9389731-9389750 MsG0580024764.01.T01:intron 20.0%
!! AAGTATATGTGTATAATGAT+TGG + Chr5:9393278-9393297 None:intergenic 20.0%
!! AATAAACTTTGATATTGCAT+GGG + Chr5:9393804-9393823 None:intergenic 20.0%
!! AATACAAAAAAGAAAAGACT+TGG + Chr5:9389015-9389034 MsG0580024763.01.T01:intron 20.0%
!! AATACTGTTAATATTAGGTT+GGG - Chr5:9390358-9390377 MsG0580024766.01.T01:three_prime_UTR 20.0%
!! AGTATATGTGTATAATGATT+GGG + Chr5:9393277-9393296 None:intergenic 20.0%
!! ATATTAGAGTATGTATTTCA+TGG + Chr5:9393649-9393668 None:intergenic 20.0%
!! ATGCAATATCAAAGTTTATT+TGG - Chr5:9393804-9393823 MsG0580024765.01.T01:intron 20.0%
!! CATTAAAAGTTTCAATGATA+TGG - Chr5:9391806-9391825 MsG0580024765.01.T01:CDS 20.0%
!! TAACTAATAGAATAATGCTT+TGG - Chr5:9391536-9391555 MsG0580024766.01.T01:intron 20.0%
!! TAATACTGTTAATATTAGGT+TGG - Chr5:9390357-9390376 MsG0580024766.01.T01:three_prime_UTR 20.0%
!! TAATTCAGTAAATAAAGCTA+AGG + Chr5:9390192-9390211 MsG0580024764.01.T01:intron 20.0%
!! TAGATAGCATATTAGAAATT+TGG + Chr5:9390289-9390308 MsG0580024764.01.T01:intron 20.0%
!! TCTAAATAGTAAAAGAAACA+TGG - Chr5:9389035-9389054 MsG0580024766.01.T02:three_prime_UTR 20.0%
!! TTAAAAGTTTCAATGATATG+GGG - Chr5:9391808-9391827 MsG0580024765.01.T01:CDS 20.0%
!! TTAATACTTGGAACTTAAAA+TGG - Chr5:9388970-9388989 MsG0580024766.01.T02:three_prime_UTR 20.0%
!! TTTGTAGTTATTATAGAGTA+TGG + Chr5:9389583-9389602 MsG0580024764.01.T01:CDS 20.0%
!!! ATTTCAAGTGTAGATTTATT+GGG - Chr5:9389402-9389421 MsG0580024766.01.T02:three_prime_UTR 20.0%
!!! CTTACAATTTTAAAGACAAA+AGG - Chr5:9392388-9392407 MsG0580024765.01.T01:intron 20.0%
!!! GCTTCATTTCTTTAATTTTT+TGG + Chr5:9392250-9392269 None:intergenic 20.0%
!!! TAAAAGAAAGTATCAGAAAA+AGG + Chr5:9393706-9393725 None:intergenic 20.0%
!!! TATTTCAAGTGTAGATTTAT+TGG - Chr5:9389401-9389420 MsG0580024766.01.T02:three_prime_UTR 20.0%
!!! TTTTTACTTTTAGGTAAAAG+AGG - Chr5:9392603-9392622 MsG0580024765.01.T01:intron 20.0%
! AAAAGATAAACTTCTTCTGA+TGG + Chr5:9389967-9389986 MsG0580024764.01.T01:CDS 25.0%
! AAATAAAGACTCCAGTATAT+AGG + Chr5:9391414-9391433 None:intergenic 25.0%
! AACAAAATCATATGATGTGA+AGG + Chr5:9391438-9391457 None:intergenic 25.0%
! AACTGTGGTTAAGAAATTAA+CGG + Chr5:9392766-9392785 None:intergenic 25.0%
! ACTCATTAAGCTGAATAATT+AGG + Chr5:9392126-9392145 None:intergenic 25.0%
! ATAAACAAATCTGTAGACTT+TGG - Chr5:9390025-9390044 MsG0580024766.01.T02:three_prime_UTR 25.0%
! ATAAACTTTGATATTGCATG+GGG + Chr5:9393803-9393822 None:intergenic 25.0%
! ATAATAACGAAGAAAACTAC+AGG + Chr5:9391289-9391308 None:intergenic 25.0%
! ATAGATAACTAAAGATCACA+TGG + Chr5:9391467-9391486 None:intergenic 25.0%
! ATAGTAAAAGAAACATGGTA+TGG - Chr5:9389040-9389059 MsG0580024766.01.T02:three_prime_UTR 25.0%
! ATGTTCTAATGCAATTCAAA+CGG - Chr5:9388693-9388712 MsG0580024766.01.T02:three_prime_UTR 25.0%
! CATGAAACATAGAACATTAT+TGG - Chr5:9388914-9388933 MsG0580024766.01.T02:three_prime_UTR 25.0%
! CATTAAAGTTAAGGCATAAA+AGG + Chr5:9393979-9393998 None:intergenic 25.0%
! CTTTATAAGAATTGCTGTAA+TGG - Chr5:9389939-9389958 MsG0580024766.01.T02:three_prime_UTR 25.0%
! GATCTTTAGTTATCTATTTC+AGG - Chr5:9391470-9391489 MsG0580024766.01.T01:intron 25.0%
! GTAAATAATATATGTGGTCA+TGG + Chr5:9394307-9394326 None:intergenic 25.0%
! TAAAAAGAACAGAGATAGAA+AGG + Chr5:9393750-9393769 None:intergenic 25.0%
! TAAACAAATCTGTAGACTTT+GGG - Chr5:9390026-9390045 MsG0580024766.01.T02:three_prime_UTR 25.0%
! TAATTTATTGACAGTGCATA+AGG + Chr5:9390742-9390761 MsG0580024764.01.T01:CDS 25.0%
! TAGATGTCTAATGAAACAAA+TGG + Chr5:9390312-9390331 MsG0580024764.01.T01:intron 25.0%
! TAGTAAAAGAAACATGGTAT+GGG - Chr5:9389041-9389060 MsG0580024766.01.T02:three_prime_UTR 25.0%
! TATAACATTTCATGCTAACT+TGG + Chr5:9393490-9393509 None:intergenic 25.0%
! TCCTAGTTTATTATGGTAAA+GGG + Chr5:9391254-9391273 None:intergenic 25.0%
! TGCTAAAGTAAAGAACAAAA+AGG + Chr5:9391624-9391643 None:intergenic 25.0%
! TTATTTACAAATAGCACAGT+TGG - Chr5:9388794-9388813 MsG0580024766.01.T02:three_prime_UTR 25.0%
! TTCTTCGTTATTATAACACA+TGG - Chr5:9391295-9391314 MsG0580024766.01.T01:intron 25.0%
! TTTATTGCATTTAACCTAGT+GGG + Chr5:9392887-9392906 None:intergenic 25.0%
!! AAAAGGATTTCAAGTAGTAT+TGG + Chr5:9389714-9389733 MsG0580024764.01.T01:intron 25.0%
!! AAATGTTTTCTTGCTTGTTT+TGG + Chr5:9390640-9390659 MsG0580024764.01.T01:intron 25.0%
!! ATACTGTTAATATTAGGTTG+GGG - Chr5:9390359-9390378 MsG0580024766.01.T01:three_prime_UTR 25.0%
!! CTTTTATGCCTTAACTTTAA+TGG - Chr5:9393977-9393996 MsG0580024765.01.T01:intron 25.0%
!! TATTAGAAATTTGGTTCCAA+CGG + Chr5:9390280-9390299 MsG0580024764.01.T01:intron 25.0%
!! TTTTAATGTGTACTGTAGAA+AGG + Chr5:9391794-9391813 None:intergenic 25.0%
!!! ATTTTTGTTTTGGGACATTT+AGG + Chr5:9391180-9391199 None:intergenic 25.0%
!!! GAAGTTTTTTACATGCATTT+TGG - Chr5:9390121-9390140 MsG0580024766.01.T02:three_prime_UTR 25.0%
!!! GGACTTTTGTTTTTACTTTT+AGG - Chr5:9392594-9392613 MsG0580024765.01.T01:intron 25.0%
!!! GTCTTTAAAATTGTAAGAGA+TGG + Chr5:9392385-9392404 None:intergenic 25.0%
!!! GTTGTTTTCAATTCTTTACT+TGG - Chr5:9394167-9394186 MsG0580024765.01.T01:CDS 25.0%
!!! TATTTGAAATTTTAGAGCTG+CGG + Chr5:9388595-9388614 MsG0580024763.01.T01:five_prime_UTR 25.0%
!!! TTATGCACACTTTTTTTCTT+AGG - Chr5:9394226-9394245 MsG0580024765.01.T01:intron 25.0%
!!! TTTTTACATGCATTTTGGTT+TGG - Chr5:9390126-9390145 MsG0580024766.01.T02:three_prime_UTR 25.0%
AAATGAGTACTCATCTTTGA+AGG + Chr5:9393445-9393464 None:intergenic 30.0%
AACATATGGCAAAGATAAGA+AGG - Chr5:9389818-9389837 MsG0580024766.01.T02:three_prime_UTR 30.0%
AACCTATTGTTTATTCTCTC+TGG - Chr5:9392415-9392434 MsG0580024765.01.T01:intron 30.0%
AACTCTCAATTGTGTTGAAA+TGG - Chr5:9389478-9389497 MsG0580024766.01.T02:three_prime_UTR 30.0%
AAGAGAAGAATGAATCTTTG+TGG - Chr5:9391108-9391127 MsG0580024766.01.T01:intron 30.0%
ACATATGGCAAAGATAAGAA+GGG - Chr5:9389819-9389838 MsG0580024766.01.T02:three_prime_UTR 30.0%
ACATCCCAATCATTTCATTA+TGG + Chr5:9392982-9393001 None:intergenic 30.0%
ACTGCACGTAATTTAAGAAT+CGG + Chr5:9389649-9389668 MsG0580024764.01.T01:CDS 30.0%
ACTGTGGTTAAGAAATTAAC+GGG + Chr5:9392765-9392784 None:intergenic 30.0%
AGAGCTTCAAAATTTCTCAA+CGG + Chr5:9394007-9394026 None:intergenic 30.0%
AGCCAAAATCTGTATAACTA+AGG + Chr5:9389750-9389769 MsG0580024764.01.T01:intron 30.0%
AGTCATTGTGTAGTTGTAAA+TGG + Chr5:9390851-9390870 MsG0580024764.01.T01:CDS 30.0%
ATAGAAAGGAGGATAAAATG+AGG + Chr5:9393736-9393755 None:intergenic 30.0%
ATATATTATTTACGTGGAGG+AGG - Chr5:9394314-9394333 MsG0580024765.01.T01:CDS 30.0%
ATCCCAATCATTTCATTATG+GGG + Chr5:9392980-9392999 None:intergenic 30.0%
ATCCCCATAATGAAATGATT+GGG - Chr5:9392975-9392994 MsG0580024765.01.T01:intron 30.0%
ATCTCTCTATTACTGATGTT+TGG - Chr5:9389208-9389227 MsG0580024766.01.T02:three_prime_UTR 30.0%
ATGATCTTGCTAGAAATTCT+GGG - Chr5:9389068-9389087 MsG0580024766.01.T02:three_prime_UTR 30.0%
ATTAAAGCTTGAAGTGGTAT+GGG - Chr5:9389438-9389457 MsG0580024766.01.T02:three_prime_UTR 30.0%
ATTCAAGGTGTAGATTTACT+GGG + Chr5:9392546-9392565 None:intergenic 30.0%
CACATATATTATTTACGTGG+AGG - Chr5:9394311-9394330 MsG0580024765.01.T01:CDS 30.0%
CATCCCAATCATTTCATTAT+GGG + Chr5:9392981-9393000 None:intergenic 30.0%
CCAAAATCTGTATAACTAAG+GGG + Chr5:9389748-9389767 MsG0580024764.01.T01:intron 30.0%
CTCCACGTAAATAATATATG+TGG + Chr5:9394313-9394332 None:intergenic 30.0%
CTCCTAGTTTATTATGGTAA+AGG + Chr5:9391255-9391274 None:intergenic 30.0%
CTTTATTGCATTTAACCTAG+TGG + Chr5:9392888-9392907 None:intergenic 30.0%
GAATTAAGTAAACAGAGCTA+AGG + Chr5:9390226-9390245 MsG0580024764.01.T01:intron 30.0%
GACCACATATATTATTTACG+TGG - Chr5:9394308-9394327 MsG0580024765.01.T01:CDS 30.0%
GAGAGAATAAACAATAGGTT+AGG + Chr5:9392415-9392434 None:intergenic 30.0%
GCCAAAATCTGTATAACTAA+GGG + Chr5:9389749-9389768 MsG0580024764.01.T01:intron 30.0%
GGAGTGATATTGTAGATTTA+TGG - Chr5:9389540-9389559 MsG0580024766.01.T02:three_prime_UTR 30.0%
GTAAATCTACACCTTGAATA+TGG - Chr5:9392547-9392566 MsG0580024765.01.T01:intron 30.0%
GTAGATTTATTGGGCATTAA+AGG - Chr5:9389411-9389430 MsG0580024766.01.T02:three_prime_UTR 30.0%
GTTCCAAGTATTAAACCAAT+AGG + Chr5:9388964-9388983 MsG0580024763.01.T01:intron 30.0%
TACTATCACTTGTAGTCTAT+GGG + Chr5:9390462-9390481 MsG0580024764.01.T01:intron 30.0%
TAGCCTCTTCAAAAAAGAAT+CGG + Chr5:9389615-9389634 MsG0580024764.01.T01:CDS 30.0%
TATTCAAGGTGTAGATTTAC+TGG + Chr5:9392547-9392566 None:intergenic 30.0%
TCATCTAACTTCTAACAAAG+TGG + Chr5:9389335-9389354 MsG0580024763.01.T01:CDS 30.0%
TCCCTTTACCATAATAAACT+AGG - Chr5:9391250-9391269 MsG0580024766.01.T01:intron 30.0%
TGAATTGCATTAGAACATCT+AGG + Chr5:9388691-9388710 MsG0580024763.01.T01:five_prime_UTR 30.0%
TGATTGTCTTGAGGATATAT+TGG + Chr5:9393032-9393051 None:intergenic 30.0%
TGGGTTATGATAAAACTTTC+AGG - Chr5:9389087-9389106 MsG0580024766.01.T02:three_prime_UTR 30.0%
TGTTCACAAGTAAAAAACTG+TGG + Chr5:9392781-9392800 None:intergenic 30.0%
TTAGATAAAGACAAGACCAT+TGG + Chr5:9392476-9392495 None:intergenic 30.0%
TTCAATTCTTTACTTGGAGA+AGG - Chr5:9394173-9394192 MsG0580024765.01.T01:CDS 30.0%
TTGAAATACAAACCAGATGA+TGG + Chr5:9389389-9389408 MsG0580024763.01.T01:CDS 30.0%
TTTACTTTGACTACGTTGAA+TGG - Chr5:9391507-9391526 MsG0580024766.01.T01:intron 30.0%
TTTAGGCATTTGTAAAGGTA+TGG + Chr5:9391163-9391182 None:intergenic 30.0%
! AATTCATCTTTTGATCTTCC+TGG - Chr5:9390946-9390965 MsG0580024766.01.T01:three_prime_UTR 30.0%
! AGTACTGAAAGGTAAATTAG+AGG - Chr5:9390891-9390910 MsG0580024766.01.T01:three_prime_UTR 30.0%
! ATTTAACAACTGGTTTAACC+TGG - Chr5:9392033-9392052 MsG0580024765.01.T01:CDS 30.0%
! TTAGGCATTTGTAAAGGTAT+GGG + Chr5:9391162-9391181 None:intergenic 30.0%
! TTTTCAGTAGATGATATCTC+TGG + Chr5:9388462-9388481 MsG0580024763.01.T01:five_prime_UTR 30.0%
!! ATGGTGTTATTATACCATCT+TGG - Chr5:9389497-9389516 MsG0580024766.01.T02:three_prime_UTR 30.0%
!! GGTCAACACATTATTTTACT+AGG + Chr5:9389314-9389333 MsG0580024763.01.T01:CDS 30.0%
!! GGTTGATTTATTTTCTTCTG+TGG - Chr5:9391909-9391928 MsG0580024765.01.T01:intron 30.0%
!! TGGTGTTATTATACCATCTT+GGG - Chr5:9389498-9389517 MsG0580024766.01.T02:three_prime_UTR 30.0%
!! TGTCCTATTGGTTTAATACT+TGG - Chr5:9388958-9388977 MsG0580024766.01.T02:three_prime_UTR 30.0%
!!! ATTTTGAAGCTCTTGGATTT+TGG - Chr5:9394014-9394033 MsG0580024765.01.T01:intron 30.0%
!!! GATCTTGTTTTTCCTTACTT+AGG - Chr5:9391854-9391873 MsG0580024765.01.T01:intron 30.0%
!!! TTGAGAAATTTTGAAGCTCT+TGG - Chr5:9394007-9394026 MsG0580024765.01.T01:intron 30.0%
AAAAGCTACTGCTGATATGT+GGG + Chr5:9388766-9388785 MsG0580024763.01.T01:CDS 35.0%
AAACTCTATAGACAAGTGCA+TGG + Chr5:9390526-9390545 MsG0580024764.01.T01:intron 35.0%
AAAGAACAGAGATAGAAAGG+AGG + Chr5:9393747-9393766 None:intergenic 35.0%
AAAGACAAGACCATTGGTAA+AGG + Chr5:9392470-9392489 None:intergenic 35.0%
AAATTCGCACTTACTCTAGA+AGG - Chr5:9393300-9393319 MsG0580024765.01.T01:intron 35.0%
AACCTATCTCTACAGTATAC+TGG - Chr5:9391688-9391707 MsG0580024765.01.T01:CDS 35.0%
AACTCTATAGACAAGTGCAT+GGG + Chr5:9390525-9390544 MsG0580024764.01.T01:intron 35.0%
AACTGCAAGACAAACTAAAC+CGG + Chr5:9394065-9394084 None:intergenic 35.0%
AAGCTGAATAATTAGGATGC+AGG + Chr5:9392119-9392138 None:intergenic 35.0%
AATTAGTTGCTACAGCATCT+AGG - Chr5:9388659-9388678 MsG0580024766.01.T02:three_prime_UTR 35.0%
ACAACTACACAATGACTCTT+TGG - Chr5:9390854-9390873 MsG0580024766.01.T01:three_prime_UTR 35.0%
ACACTTTCTGCTCTTAGAAA+AGG - Chr5:9389254-9389273 MsG0580024766.01.T02:three_prime_UTR 35.0%
ACGGGTTTCCATTAAAGTTA+AGG + Chr5:9393988-9394007 None:intergenic 35.0%
ACTATCACTTGTAGTCTATG+GGG + Chr5:9390461-9390480 MsG0580024764.01.T01:intron 35.0%
ACTGAACTGAATGTCTCAAT+CGG - Chr5:9390991-9391010 MsG0580024766.01.T01:intron 35.0%
AGAATGAAGAAATTCTCCAC+TGG - Chr5:9391939-9391958 MsG0580024765.01.T01:intron 35.0%
AGCCTCTTCAAAAAAGAATC+GGG + Chr5:9389614-9389633 MsG0580024764.01.T01:CDS 35.0%
AGCTGAATAATTAGGATGCA+GGG + Chr5:9392118-9392137 None:intergenic 35.0%
AGTACTCCTGAAGATATTGT+AGG - Chr5:9391832-9391851 MsG0580024765.01.T01:CDS 35.0%
ATGAGTAAACCAACAAAGCA+AGG - Chr5:9394145-9394164 MsG0580024765.01.T01:CDS 35.0%
ATTAGTTGCTACAGCATCTA+GGG - Chr5:9388660-9388679 MsG0580024766.01.T02:three_prime_UTR 35.0%
ATTTATCTTTGCTACACCAG+TGG + Chr5:9391958-9391977 None:intergenic 35.0%
ATTTCATTATGGGGATCATG+GGG + Chr5:9392971-9392990 None:intergenic 35.0%
CAAGATCCTACAATATCTTC+AGG + Chr5:9391841-9391860 None:intergenic 35.0%
CAATATCACTCCATCTTTCA+TGG + Chr5:9389532-9389551 None:intergenic 35.0%
CACAAAGTACAACCTAAGTA+AGG + Chr5:9391869-9391888 None:intergenic 35.0%
CACACACATACAAACTGAAA+CGG + Chr5:9393576-9393595 None:intergenic 35.0%
CAGTAAATAAAGCTAAGGAC+TGG + Chr5:9390187-9390206 MsG0580024764.01.T01:intron 35.0%
CAGTATATAGGCAGATAAAC+AGG + Chr5:9391402-9391421 None:intergenic 35.0%
CATGATCTTGCTAGAAATTC+TGG - Chr5:9389067-9389086 MsG0580024766.01.T02:three_prime_UTR 35.0%
CATTAAAGCTTGAAGTGGTA+TGG - Chr5:9389437-9389456 MsG0580024766.01.T02:three_prime_UTR 35.0%
CATTTCATTATGGGGATCAT+GGG + Chr5:9392972-9392991 None:intergenic 35.0%
CTACTATCACTTGTAGTCTA+TGG + Chr5:9390463-9390482 MsG0580024764.01.T01:intron 35.0%
CTGCACGTAATTTAAGAATC+GGG + Chr5:9389648-9389667 MsG0580024764.01.T01:CDS 35.0%
CTGTTTATCTGCCTATATAC+TGG - Chr5:9391400-9391419 MsG0580024766.01.T01:intron 35.0%
GAGACATTCAGTTCAGTATT+TGG + Chr5:9390988-9391007 MsG0580024764.01.T01:CDS 35.0%
GAGCTTCAAAATTTCTCAAC+GGG + Chr5:9394006-9394025 None:intergenic 35.0%
GATCCCCATAATGAAATGAT+TGG - Chr5:9392974-9392993 MsG0580024765.01.T01:intron 35.0%
GCAAGCAGTCTATTCAAAAT+TGG + Chr5:9392348-9392367 None:intergenic 35.0%
GGAATATGTCATGGTCTAAT+AGG + Chr5:9393469-9393488 None:intergenic 35.0%
GGACATTTAGGCATTTGTAA+AGG + Chr5:9391168-9391187 None:intergenic 35.0%
GTACTCGACAAATCAATTAC+TGG + Chr5:9392503-9392522 None:intergenic 35.0%
GTAGTTGTCTACATACATAC+CGG - Chr5:9393871-9393890 MsG0580024765.01.T01:intron 35.0%
GTATTAAACCAATAGGACAG+CGG + Chr5:9388957-9388976 MsG0580024763.01.T01:intron 35.0%
GTCATTCCTTATGAAGAAAG+TGG + Chr5:9392694-9392713 None:intergenic 35.0%
GTCCAGAGAGAATAAACAAT+AGG + Chr5:9392420-9392439 None:intergenic 35.0%
TAATGTGTACTGTAGAAAGG+AGG + Chr5:9391791-9391810 None:intergenic 35.0%
TACCATCCACTTTCTTCATA+AGG - Chr5:9392685-9392704 MsG0580024765.01.T01:intron 35.0%
TAGGATCTGCAAAGAGAAAT+AGG - Chr5:9392209-9392228 MsG0580024765.01.T01:intron 35.0%
TATTAAACCAATAGGACAGC+GGG + Chr5:9388956-9388975 MsG0580024763.01.T01:intron 35.0%
TCATTTCATTATGGGGATCA+TGG + Chr5:9392973-9392992 None:intergenic 35.0%
TCTATGTTTCATGATCGCAT+GGG + Chr5:9388907-9388926 MsG0580024763.01.T01:intron 35.0%
TCTCTTGCATAACAATTCTG+AGG + Chr5:9391094-9391113 None:intergenic 35.0%
TGAAAACAACCTTGCTTTGT+TGG + Chr5:9394157-9394176 None:intergenic 35.0%
TGCACGTAATTTAAGAATCG+GGG + Chr5:9389647-9389666 MsG0580024764.01.T01:CDS 35.0%
TGCTAACTTGGAATATGTCA+TGG + Chr5:9393478-9393497 None:intergenic 35.0%
TGCTTCAGCAATTTAACAAC+TGG - Chr5:9392023-9392042 MsG0580024765.01.T01:CDS 35.0%
TGGGATCTTCATCTGAATTA+AGG + Chr5:9388747-9388766 MsG0580024763.01.T01:CDS 35.0%
TGTCAGCTCCTAGTTTATTA+TGG + Chr5:9391261-9391280 None:intergenic 35.0%
TGTGTAGTTGTAAATGGACA+AGG + Chr5:9390845-9390864 MsG0580024764.01.T01:CDS 35.0%
TGTTACATTTCGCAACTCTA+TGG + Chr5:9391562-9391581 None:intergenic 35.0%
TGTTGAGTTCCAAAATCATC+TGG + Chr5:9388569-9388588 MsG0580024763.01.T01:five_prime_UTR 35.0%
TTCCTTATGAAGAAAGTGGA+TGG + Chr5:9392690-9392709 None:intergenic 35.0%
TTCTATGTTTCATGATCGCA+TGG + Chr5:9388908-9388927 MsG0580024763.01.T01:intron 35.0%
TTCTTACAGATCCTTCCATT+CGG - Chr5:9388493-9388512 MsG0580024766.01.T02:three_prime_UTR 35.0%
TTGATATTGCATGGGGTAAT+AGG + Chr5:9393796-9393815 None:intergenic 35.0%
TTGCATTAGAACATCTAGGT+AGG + Chr5:9388687-9388706 MsG0580024763.01.T01:five_prime_UTR 35.0%
TTGTGTCTTTGATTGTCTTG+AGG + Chr5:9393041-9393060 None:intergenic 35.0%
! CATACCACTTCAAGCTTTAA+TGG + Chr5:9389439-9389458 None:intergenic 35.0%
! CCCCTTAGTTATACAGATTT+TGG - Chr5:9389745-9389764 MsG0580024766.01.T02:three_prime_UTR 35.0%
! GGTTGGTATGTTGAAACATA+TGG - Chr5:9389804-9389823 MsG0580024766.01.T02:three_prime_UTR 35.0%
! GTGCAGAAAACTTGTTCAAT+AGG - Chr5:9390701-9390720 MsG0580024766.01.T01:three_prime_UTR 35.0%
! TTGTACTTTGTGTTGACCTT+GGG - Chr5:9391877-9391896 MsG0580024765.01.T01:intron 35.0%
! TTTTAACCTCTCAGTCCAAA+GGG - Chr5:9393765-9393784 MsG0580024765.01.T01:intron 35.0%
! TTTTTAACCTCTCAGTCCAA+AGG - Chr5:9393764-9393783 MsG0580024765.01.T01:intron 35.0%
!! AGTTGGTAGCAAAATCCATT+TGG - Chr5:9388811-9388830 MsG0580024766.01.T02:three_prime_UTR 35.0%
!! ATTCTAGAGCTTTACTTGCT+TGG + Chr5:9389190-9389209 MsG0580024763.01.T01:intron 35.0%
!! CTCAAATTAGCCTTTACCAA+TGG - Chr5:9392457-9392476 MsG0580024765.01.T01:intron 35.0%
!! GTTAATATTAGGTTGGGGAT+GGG - Chr5:9390364-9390383 MsG0580024766.01.T01:three_prime_UTR 35.0%
!! GTTGGTAGCAAAATCCATTT+GGG - Chr5:9388812-9388831 MsG0580024766.01.T02:three_prime_UTR 35.0%
!! TGTTAATATTAGGTTGGGGA+TGG - Chr5:9390363-9390382 MsG0580024766.01.T01:three_prime_UTR 35.0%
!! TTTCAGGTCGTGATCTTTTT+GGG - Chr5:9388412-9388431 MsG0580024766.01.T02:three_prime_UTR 35.0%
AAATCTCAGAGGTTCCTGTA+AGG - Chr5:9393092-9393111 MsG0580024765.01.T01:intron 40.0%
AACCTCAGGAGTTTCATAAG+AGG + Chr5:9388382-9388401 None:intergenic 40.0%
AATGTTGTGCAACTATCTCC+AGG + Chr5:9391041-9391060 MsG0580024764.01.T01:CDS 40.0%
AATTAACGGGATCACAATGC+AGG + Chr5:9392752-9392771 None:intergenic 40.0%
ACATAACAACATCCTTCGTC+TGG + Chr5:9388862-9388881 MsG0580024763.01.T01:intron 40.0%
ACTCTATAGACAAGTGCATG+GGG + Chr5:9390524-9390543 MsG0580024764.01.T01:intron 40.0%
ACTGCAAGACAAACTAAACC+GGG + Chr5:9394064-9394083 None:intergenic 40.0%
AGACATTAGACACCACATTC+TGG - Chr5:9392824-9392843 MsG0580024765.01.T01:CDS 40.0%
AGAGCAAACAGATACATTGC+TGG + Chr5:9390588-9390607 MsG0580024764.01.T01:intron 40.0%
AGGATGGAATGCTGTATTCA+TGG + Chr5:9393425-9393444 None:intergenic 40.0%
ATAATCTTATCCGGCTTCCA+CGG - Chr5:9391332-9391351 MsG0580024766.01.T01:intron 40.0%
ATACCGGTCTTTGCTCAAAA+GGG - Chr5:9393887-9393906 MsG0580024765.01.T01:intron 40.0%
ATATGTTCCGAGTTCTTCAC+TGG - Chr5:9390679-9390698 MsG0580024766.01.T01:three_prime_UTR 40.0%
ATCCATTTGGGAACCATATC+TGG - Chr5:9388824-9388843 MsG0580024766.01.T02:three_prime_UTR 40.0%
ATTAACGGGATCACAATGCA+GGG + Chr5:9392751-9392770 None:intergenic 40.0%
ATTATAGCGAGCAAGCTGAA+AGG - Chr5:9389880-9389899 MsG0580024766.01.T02:three_prime_UTR 40.0%
CACATATATTCCTTGTCTCC+AGG + Chr5:9392054-9392073 None:intergenic 40.0%
CATGTAGATAAGACTACGTG+AGG + Chr5:9390917-9390936 MsG0580024764.01.T01:CDS 40.0%
CGTCCATTACAGATTGACAA+AGG + Chr5:9388520-9388539 MsG0580024763.01.T01:five_prime_UTR 40.0%
CTAACTGTCATGCTTTCTGA+TGG - Chr5:9393613-9393632 MsG0580024765.01.T01:intron 40.0%
CTAGCTCGTGATAGATTGTT+GGG + Chr5:9392192-9392211 None:intergenic 40.0%
CTGAGATTTATACTAGCTGC+TGG + Chr5:9393081-9393100 None:intergenic 40.0%
CTTCTGTCCTAACATGCATA+TGG - Chr5:9391356-9391375 MsG0580024766.01.T01:intron 40.0%
GAAAAGCTACTGCTGATATG+TGG + Chr5:9388767-9388786 MsG0580024763.01.T01:CDS 40.0%
GAAAGGAGGATAAAATGAGG+AGG + Chr5:9393733-9393752 None:intergenic 40.0%
GAACACATGAATGTGATCTC+CGG + Chr5:9388725-9388744 MsG0580024763.01.T01:CDS 40.0%
GAAGAAAGTGGATGGTATGA+CGG + Chr5:9392682-9392701 None:intergenic 40.0%
GACCAGTATACTGTAGAGAT+AGG + Chr5:9391693-9391712 None:intergenic 40.0%
GAGAGTTAAGAGAGTAACCT+CGG - Chr5:9392637-9392656 MsG0580024765.01.T01:intron 40.0%
GAGATGAATGGAGAAACAAG+TGG + Chr5:9393955-9393974 None:intergenic 40.0%
GAGTCATTGCTAGCTCAATT+TGG - Chr5:9390765-9390784 MsG0580024766.01.T01:intron 40.0%
GATGGAATGCTGTATTCATG+GGG + Chr5:9393423-9393442 None:intergenic 40.0%
GCAAGTTCCATATGCATGTT+AGG + Chr5:9391366-9391385 None:intergenic 40.0%
GCAGCTAGTATAAATCTCAG+AGG - Chr5:9393081-9393100 MsG0580024765.01.T01:intron 40.0%
GCCTCTTCAAAAAAGAATCG+GGG + Chr5:9389613-9389632 MsG0580024764.01.T01:CDS 40.0%
GGATGGAATGCTGTATTCAT+GGG + Chr5:9393424-9393443 None:intergenic 40.0%
GGCATAAAAGGTGAGATGAA+TGG + Chr5:9393967-9393986 None:intergenic 40.0%
GGGATGTGAACATGAAAAAG+AGG - Chr5:9392995-9393014 MsG0580024765.01.T01:intron 40.0%
GGGTAATAGGATATTCCCTT+TGG + Chr5:9393783-9393802 None:intergenic 40.0%
GGTGAAAGAACCATGAAAGA+TGG - Chr5:9389519-9389538 MsG0580024766.01.T02:three_prime_UTR 40.0%
GGTTCCATTAAAGCTTGAAG+TGG - Chr5:9389432-9389451 MsG0580024766.01.T02:three_prime_UTR 40.0%
GTAATTTATCCTCAGTCCGT+TGG - Chr5:9390261-9390280 MsG0580024766.01.T02:three_prime_UTR 40.0%
TAAGGAGTGGAGTGATAAGA+GGG + Chr5:9390403-9390422 MsG0580024764.01.T01:intron 40.0%
TAGATTGTTGGGCTCTTACA+AGG + Chr5:9392181-9392200 None:intergenic 40.0%
TCAGTTTGTATGTGTGTGCA+GGG - Chr5:9393578-9393597 MsG0580024765.01.T01:intron 40.0%
TCTATGTTGTTGCCAGAATG+TGG + Chr5:9392839-9392858 None:intergenic 40.0%
TCTTACAGATCCTTCCATTC+GGG - Chr5:9388494-9388513 MsG0580024766.01.T02:three_prime_UTR 40.0%
TCTTTACTTGGAGAAGGAAG+AGG - Chr5:9394179-9394198 MsG0580024765.01.T01:intron 40.0%
TGCTGAAGCAAACTCTAGTT+GGG + Chr5:9392013-9392032 None:intergenic 40.0%
TTAAGGAGTGGAGTGATAAG+AGG + Chr5:9390404-9390423 MsG0580024764.01.T01:intron 40.0%
TTATATGCGTAGCCATCATC+TGG - Chr5:9389374-9389393 MsG0580024766.01.T02:three_prime_UTR 40.0%
TTCAGTTTGTATGTGTGTGC+AGG - Chr5:9393577-9393596 MsG0580024765.01.T01:intron 40.0%
TTGCTGAAGCAAACTCTAGT+TGG + Chr5:9392014-9392033 None:intergenic 40.0%
TTTACTGGGACATAGCAAGT+AGG + Chr5:9392532-9392551 None:intergenic 40.0%
TTTATACTAGCTGCTGGAAC+AGG + Chr5:9393075-9393094 None:intergenic 40.0%
TTTGGATGATGAACGAACCA+TGG - Chr5:9394032-9394051 MsG0580024765.01.T01:intron 40.0%
! CATATGCACTGGTATCATGT+GGG - Chr5:9389115-9389134 MsG0580024766.01.T02:three_prime_UTR 40.0%
! CTGTGTTGATGTTACCTTAC+AGG + Chr5:9393109-9393128 None:intergenic 40.0%
! GAGTACTCATCTTTGAAGGA+TGG + Chr5:9393441-9393460 None:intergenic 40.0%
! GTAGAAAGGCCAGATGATTT+TGG - Chr5:9388557-9388576 MsG0580024766.01.T02:three_prime_UTR 40.0%
! GTTGTACTTTGTGTTGACCT+TGG - Chr5:9391876-9391895 MsG0580024765.01.T01:intron 40.0%
! GTTTCTTCCTGACTGTTTTG+AGG - Chr5:9388344-9388363 MsG0580024766.01.T02:three_prime_UTR 40.0%
! TCTAAGAGCAGAAAGTGTGA+GGG + Chr5:9389252-9389271 MsG0580024763.01.T01:CDS 40.0%
! TTCTAAGAGCAGAAAGTGTG+AGG + Chr5:9389253-9389272 MsG0580024763.01.T01:CDS 40.0%
! TTTTATCGAGCATTAGCAGG+AGG + Chr5:9391670-9391689 None:intergenic 40.0%
!! AGGTTTTATCGAGCATTAGC+AGG + Chr5:9391673-9391692 None:intergenic 40.0%
!! CGTAGTCTTATCTACATGGT+TGG - Chr5:9390919-9390938 MsG0580024766.01.T01:three_prime_UTR 40.0%
!! CTCACGTAGTCTTATCTACA+TGG - Chr5:9390915-9390934 MsG0580024766.01.T01:three_prime_UTR 40.0%
!! GGTTTAGTTTGTCTTGCAGT+TGG - Chr5:9394064-9394083 MsG0580024765.01.T01:CDS 40.0%
!! GTTTCAGGTCGTGATCTTTT+TGG - Chr5:9388411-9388430 MsG0580024766.01.T02:three_prime_UTR 40.0%
!! TCATAATGTTGGTTGGTGGT+TGG + Chr5:9390437-9390456 MsG0580024764.01.T01:intron 40.0%
!! TCTCTGGAATCTTGTTGACT+AGG + Chr5:9388446-9388465 MsG0580024763.01.T01:five_prime_UTR 40.0%
!!! ACCCCGATTCTTTTTTGAAG+AGG - Chr5:9389609-9389628 MsG0580024766.01.T02:three_prime_UTR 40.0%
AAGCAAACTCTAGTTGGGAC+TGG + Chr5:9392008-9392027 None:intergenic 45.0%
ACCTGCGCAAACCATATTCA+AGG + Chr5:9392561-9392580 None:intergenic 45.0%
AGATGACTTCGATCATGCTG+TGG - Chr5:9389349-9389368 MsG0580024766.01.T02:three_prime_UTR 45.0%
AGTTAAGAGAGTAACCTCGG+TGG - Chr5:9392640-9392659 MsG0580024765.01.T01:intron 45.0%
ATAGACAAGTGCATGGGGTT+GGG + Chr5:9390519-9390538 MsG0580024764.01.T01:intron 45.0%
ATGGGGCTCATAATGTTGGT+TGG + Chr5:9390444-9390463 MsG0580024764.01.T01:intron 45.0%
ATTGCCTGCAGATGTGAAAG+CGG + Chr5:9391758-9391777 None:intergenic 45.0%
CATACCAACCTCCTATGTCA+TGG + Chr5:9389794-9389813 MsG0580024764.01.T01:intron 45.0%
CATACCGGTCTTTGCTCAAA+AGG - Chr5:9393886-9393905 MsG0580024765.01.T01:intron 45.0%
CATGGTTCTTTCACCCAAGA+TGG + Chr5:9389514-9389533 None:intergenic 45.0%
CCAACAATCTATCACGAGCT+AGG - Chr5:9392190-9392209 MsG0580024765.01.T01:intron 45.0%
CCTAGCTCGTGATAGATTGT+TGG + Chr5:9392193-9392212 None:intergenic 45.0%
CTAAAGCTTGCAGCTGCAAT+TGG - Chr5:9393324-9393343 MsG0580024765.01.T01:intron 45.0%
CTAGAGCTTTACTTGCTTGG+TGG + Chr5:9389187-9389206 MsG0580024763.01.T01:intron 45.0%
CTGAATGTCTCAATCGGTCA+AGG - Chr5:9390997-9391016 MsG0580024766.01.T01:intron 45.0%
CTGTATTCATGGGGAGAACT+GGG + Chr5:9393414-9393433 None:intergenic 45.0%
GAAACAAGTGGATCTTCAGG+AGG + Chr5:9393943-9393962 None:intergenic 45.0%
GAAACCAAGTGCAAAACCTC+AGG + Chr5:9388396-9388415 MsG0580024763.01.T01:five_prime_UTR 45.0%
GAGTGTTCGTGACTACAGAA+GGG - Chr5:9392857-9392876 MsG0580024765.01.T01:CDS 45.0%
GATATTCCCTTTGGACTGAG+AGG + Chr5:9393774-9393793 None:intergenic 45.0%
GCAATTCAAACGGAAGATGC+CGG - Chr5:9388703-9388722 MsG0580024766.01.T02:three_prime_UTR 45.0%
GGAGAAACAAGTGGATCTTC+AGG + Chr5:9393946-9393965 None:intergenic 45.0%
GGGACTTCAATTTCCAATCC+AGG - Chr5:9393907-9393926 MsG0580024765.01.T01:intron 45.0%
GGGCCTTTGTCAATCTGTAA+TGG - Chr5:9388514-9388533 MsG0580024766.01.T02:three_prime_UTR 45.0%
GTCCAGATATGGTTCCCAAA+TGG + Chr5:9388829-9388848 MsG0580024763.01.T01:intron 45.0%
GTCCTCTTATGAAACTCCTG+AGG - Chr5:9388377-9388396 MsG0580024766.01.T02:three_prime_UTR 45.0%
GTCTATGGGGCTCATAATGT+TGG + Chr5:9390448-9390467 MsG0580024764.01.T01:intron 45.0%
GTTGACCTTGGGAACTTGAA+CGG - Chr5:9391888-9391907 MsG0580024765.01.T01:intron 45.0%
TATAGACAAGTGCATGGGGT+TGG + Chr5:9390520-9390539 MsG0580024764.01.T01:intron 45.0%
TATGCCGTCACAAAGGTTCT+GGG - Chr5:9389848-9389867 MsG0580024766.01.T02:three_prime_UTR 45.0%
TCTTCAGCCTCAAAACAGTC+AGG + Chr5:9388354-9388373 None:intergenic 45.0%
TGGTTGGAGTGGAAGAGTTA+AGG + Chr5:9390421-9390440 MsG0580024764.01.T01:intron 45.0%
TGTCATGCTTTCTGATGGCT+TGG - Chr5:9393618-9393637 MsG0580024765.01.T01:intron 45.0%
TTAACGGGATCACAATGCAG+GGG + Chr5:9392750-9392769 None:intergenic 45.0%
TTACTTGGAGAAGGAAGAGG+AGG - Chr5:9394182-9394201 MsG0580024765.01.T01:intron 45.0%
TTCAGGTGAAGCATATGCAC+TGG - Chr5:9389104-9389123 MsG0580024766.01.T02:three_prime_UTR 45.0%
TTCTGCACCAGTGAAGAACT+CGG + Chr5:9390689-9390708 MsG0580024764.01.T01:intron 45.0%
TTGGGAACCATATCTGGACT+TGG - Chr5:9388830-9388849 MsG0580024766.01.T02:three_prime_UTR 45.0%
! AACTCCTGAGGTTTTGCACT+TGG - Chr5:9388389-9388408 MsG0580024766.01.T02:three_prime_UTR 45.0%
! ACCTTGAATATGGTTTGCGC+AGG - Chr5:9392557-9392576 MsG0580024765.01.T01:intron 45.0%
! ACTGGTTTAACCTGGAGACA+AGG - Chr5:9392041-9392060 MsG0580024765.01.T01:CDS 45.0%
! AGAGTGTTCGTGACTACAGA+AGG - Chr5:9392856-9392875 MsG0580024765.01.T01:CDS 45.0%
! AGTCCCTTTTGAGCAAAGAC+CGG + Chr5:9393893-9393912 None:intergenic 45.0%
! ATCAACCGTTCAAGTTCCCA+AGG + Chr5:9391896-9391915 None:intergenic 45.0%
! GAGGTTTTGCACTTGGTTTC+AGG - Chr5:9388396-9388415 MsG0580024766.01.T02:three_prime_UTR 45.0%
! GATCTAGAGTTGCATGTCTC+TGG - Chr5:9388635-9388654 MsG0580024766.01.T02:three_prime_UTR 45.0%
! GATGCTCTGCTAGTACTGAA+AGG - Chr5:9390880-9390899 MsG0580024766.01.T01:three_prime_UTR 45.0%
! GCATATGCACTGGTATCATG+TGG - Chr5:9389114-9389133 MsG0580024766.01.T02:three_prime_UTR 45.0%
! TGATCGCATGGGTCTTTTCA+CGG + Chr5:9388896-9388915 MsG0580024763.01.T01:intron 45.0%
!! AATTTGGTTCCAACGGACTG+AGG + Chr5:9390273-9390292 MsG0580024764.01.T01:intron 45.0%
!! AGGTCGTGATCTTTTTGGGA+TGG - Chr5:9388416-9388435 MsG0580024766.01.T02:three_prime_UTR 45.0%
!! ATGGTATGACGGACAGATGT+GGG + Chr5:9392671-9392690 None:intergenic 45.0%
!! TTTTGATCTTCCTGGTGCTG+TGG - Chr5:9390954-9390973 MsG0580024766.01.T01:three_prime_UTR 45.0%
!!! ACTGTTTTGAGGCTGAAGAG+AGG - Chr5:9388355-9388374 MsG0580024766.01.T02:three_prime_UTR 45.0%
AACGAACCATGGTTGCTTCC+CGG - Chr5:9394043-9394062 MsG0580024765.01.T01:intron 50.0%
AACTATCTCCAGGCAAGGCA+CGG + Chr5:9391031-9391050 MsG0580024764.01.T01:CDS 50.0%
ACTAAACCGGGAAGCAACCA+TGG + Chr5:9394052-9394071 None:intergenic 50.0%
AGGAGGCCAGTACTGCAAAT+GGG + Chr5:9391653-9391672 None:intergenic 50.0%
ATGCAGGGGTGGAGTTATGT+TGG + Chr5:9392736-9392755 None:intergenic 50.0%
CAGATTGACAAAGGCCCGAA+TGG + Chr5:9388511-9388530 MsG0580024763.01.T01:five_prime_UTR 50.0%
CATGTTAGGACAGAAGTCCG+TGG + Chr5:9391352-9391371 None:intergenic 50.0%
CCATCCCAGAACCTTTGTGA+CGG + Chr5:9389855-9389874 MsG0580024764.01.T01:intron 50.0%
CTATGCCGTCACAAAGGTTC+TGG - Chr5:9389847-9389866 MsG0580024766.01.T02:three_prime_UTR 50.0%
GAAGGAAGAGGAGGAAAAGG+AGG - Chr5:9394191-9394210 MsG0580024765.01.T01:intron 50.0%
GAGTGCTCCAAGTCCAGATA+TGG + Chr5:9388840-9388859 MsG0580024763.01.T01:intron 50.0%
GATCCTCCCATTTGCAGTAC+TGG - Chr5:9391644-9391663 MsG0580024765.01.T01:CDS 50.0%
GCACCAGCAGGAATGTAGAA+AGG - Chr5:9388543-9388562 MsG0580024766.01.T02:three_prime_UTR 50.0%
GCTGTATTCATGGGGAGAAC+TGG + Chr5:9393415-9393434 None:intergenic 50.0%
GCTTCCATGACATAGGAGGT+TGG - Chr5:9389787-9389806 MsG0580024766.01.T02:three_prime_UTR 50.0%
GGAGAAGGAAGAGGAGGAAA+AGG - Chr5:9394188-9394207 MsG0580024765.01.T01:intron 50.0%
GGAGTGGAAGAGTTAAGGAG+TGG + Chr5:9390416-9390435 MsG0580024764.01.T01:intron 50.0%
GTCGTACTATGCCGTCACAA+AGG - Chr5:9389841-9389860 MsG0580024766.01.T02:three_prime_UTR 50.0%
TACAGAAGGGAGTTCCCACT+AGG - Chr5:9392870-9392889 MsG0580024765.01.T01:CDS 50.0%
TCGTTCTTTCTTCGCCTTGG+AGG + Chr5:9393384-9393403 None:intergenic 50.0%
TGGAGTGATAAGAGGGTCGA+GGG + Chr5:9390396-9390415 MsG0580024764.01.T01:intron 50.0%
TGGATCTTCAGGAGGTAGCT+GGG + Chr5:9393935-9393954 None:intergenic 50.0%
TGGCCTTTCTACATTCCTGC+TGG + Chr5:9388549-9388568 MsG0580024763.01.T01:five_prime_UTR 50.0%
TGTGCAACTATCTCCAGGCA+AGG + Chr5:9391036-9391055 MsG0580024764.01.T01:CDS 50.0%
TGTGGCTTCCATGACATAGG+AGG - Chr5:9389783-9389802 MsG0580024766.01.T02:three_prime_UTR 50.0%
TTGACAAAGGCCCGAATGGA+AGG + Chr5:9388507-9388526 MsG0580024763.01.T01:five_prime_UTR 50.0%
TTGCTATCCCGCTGTCCTAT+TGG - Chr5:9388946-9388965 MsG0580024766.01.T02:three_prime_UTR 50.0%
TTGGCAGTGTTCACAGTGCT+TGG + Chr5:9393354-9393373 None:intergenic 50.0%
! GGGCTCATAATGTTGGTTGG+TGG + Chr5:9390441-9390460 MsG0580024764.01.T01:intron 50.0%
!! ACAAAGGTTCTGGGATGGCT+TGG - Chr5:9389857-9389876 MsG0580024766.01.T02:three_prime_UTR 50.0%
!! ACATCTCTGAAACGCGACTG+TGG + Chr5:9390161-9390180 MsG0580024764.01.T01:intron 50.0%
!! ACTGGAGCATTGCTTGTCAC+TGG + Chr5:9391990-9392009 None:intergenic 50.0%
!! ATGTTGGTTGGTGGTTGGAG+TGG + Chr5:9390432-9390451 MsG0580024764.01.T01:intron 50.0%
!! CATCTCTGAAACGCGACTGT+GGG + Chr5:9390160-9390179 MsG0580024764.01.T01:intron 50.0%
!! GATGGTATGACGGACAGATG+TGG + Chr5:9392672-9392691 None:intergenic 50.0%
!! TTCCTGGTGCTGTGGTCTAT+TGG - Chr5:9390962-9390981 MsG0580024766.01.T01:three_prime_UTR 50.0%
AGGCCAGTACTGCAAATGGG+AGG + Chr5:9391650-9391669 None:intergenic 55.0%
AGGCGAAGAAAGAACGACCC+TGG - Chr5:9393387-9393406 MsG0580024765.01.T01:intron 55.0%
AGGTAGCTGGGATCCTGGAT+TGG + Chr5:9393923-9393942 None:intergenic 55.0%
ATGTCATGGAAGCCACAGCG+AGG + Chr5:9389780-9389799 MsG0580024764.01.T01:intron 55.0%
CAGGAGGCCAGTACTGCAAA+TGG + Chr5:9391654-9391673 None:intergenic 55.0%
CGCTGTGGCTTCCATGACAT+AGG - Chr5:9389780-9389799 MsG0580024766.01.T02:three_prime_UTR 55.0%
GCGCAGGTGAAGTCTTCAGA+GGG - Chr5:9392573-9392592 MsG0580024765.01.T01:intron 55.0%
GGGTCGTTCTTTCTTCGCCT+TGG + Chr5:9393387-9393406 None:intergenic 55.0%
GTGGAGTGATAAGAGGGTCG+AGG + Chr5:9390397-9390416 MsG0580024764.01.T01:intron 55.0%
GTGGATCTTCAGGAGGTAGC+TGG + Chr5:9393936-9393955 None:intergenic 55.0%
TCGTCCGCTTTCACATCTGC+AGG - Chr5:9391751-9391770 MsG0580024765.01.T01:CDS 55.0%
TGCGCAGGTGAAGTCTTCAG+AGG - Chr5:9392572-9392591 MsG0580024765.01.T01:intron 55.0%
TGGCTATTTGAGCCTCGCTG+TGG - Chr5:9389765-9389784 MsG0580024766.01.T02:three_prime_UTR 55.0%
TTCTTCGCCTTGGAGGTCTC+TGG + Chr5:9393377-9393396 None:intergenic 55.0%
! ACTTGGAGCACTCCAGACGA+AGG - Chr5:9388847-9388866 MsG0580024766.01.T02:three_prime_UTR 55.0%
! GCTTGGTGGTAAACGTGCTC+TGG + Chr5:9389173-9389192 MsG0580024763.01.T01:intron 55.0%
! TAATGGACGTGAGCACCAGC+AGG - Chr5:9388531-9388550 MsG0580024766.01.T02:three_prime_UTR 55.0%
! TGCATGGGGTTGGGTTGTTG+AGG + Chr5:9390510-9390529 MsG0580024764.01.T01:intron 55.0%
!! CCGTCACAAAGGTTCTGGGA+TGG - Chr5:9389852-9389871 MsG0580024766.01.T02:three_prime_UTR 55.0%
ACGGGATCACAATGCAGGGG+TGG + Chr5:9392747-9392766 None:intergenic 60.0%
AGATGTGGGTCAAGCCACCG+AGG + Chr5:9392657-9392676 None:intergenic 60.0%
CATGGGGAGAACTGGGTCCA+GGG + Chr5:9393407-9393426 None:intergenic 60.0%
CTGCCAACCAGAGACCTCCA+AGG - Chr5:9393367-9393386 MsG0580024765.01.T01:intron 60.0%
GGACAGAAGTCCGTGGAAGC+CGG + Chr5:9391345-9391364 None:intergenic 60.0%
GGCCAATAGACCACAGCACC+AGG + Chr5:9390967-9390986 MsG0580024764.01.T01:CDS 60.0%
TCAGGAGGTAGCTGGGATCC+TGG + Chr5:9393928-9393947 None:intergenic 60.0%
TCATGGGGAGAACTGGGTCC+AGG + Chr5:9393408-9393427 None:intergenic 60.0%
TCGCCTTGGAGGTCTCTGGT+TGG + Chr5:9393373-9393392 None:intergenic 60.0%
TCTTGCAGCTGCTGCTGCTG+AGG + Chr5:9391728-9391747 None:intergenic 60.0%
TGGGGATCATGGGGTGAGCA+AGG + Chr5:9392962-9392981 None:intergenic 60.0%
! ACTAGCTTCCGTGCCTTGCC+TGG - Chr5:9391020-9391039 MsG0580024766.01.T01:intron 60.0%
GCTGCTGCTGAGGCTGCAGA+TGG + Chr5:9391718-9391737 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 9388339 9394355 9388339 ID=MsG0580024766.01;Name=MsG0580024766.01
Chr5 mRNA 9390268 9394355 9390268 ID=MsG0580024766.01.T01;Parent=MsG0580024766.01;Name=MsG0580024766.01.T01;_AED=0.41;_eAED=0.41;_QI=0|0.8|0.83|1|0.2|0|6|700|159
Chr5 exon 9390268 9390753 9390268 ID=MsG0580024766.01.T01:exon:2907;Parent=MsG0580024766.01.T01
Chr5 exon 9390845 9390991 9390845 ID=MsG0580024766.01.T01:exon:2906;Parent=MsG0580024766.01.T01
Chr5 exon 9391793 9391859 9391793 ID=MsG0580024766.01.T01:exon:2905;Parent=MsG0580024766.01.T01
Chr5 CDS 9394173 9394355 9394173 ID=MsG0580024766.01.T01:cds;Parent=MsG0580024766.01.T01
Chr5 CDS 9392793 9392941 9392793 ID=MsG0580024766.01.T01:cds;Parent=MsG0580024766.01.T01
Chr5 CDS 9391972 9392119 9391972 ID=MsG0580024766.01.T01:cds;Parent=MsG0580024766.01.T01
Chr5 three_prime_UTR 9391793 9391859 9391793 ID=MsG0580024766.01.T01:three_prime_utr;Parent=MsG0580024766.01.T01
Chr5 three_prime_UTR 9390845 9390991 9390845 ID=MsG0580024766.01.T01:three_prime_utr;Parent=MsG0580024766.01.T01
Chr5 three_prime_UTR 9390268 9390753 9390268 ID=MsG0580024766.01.T01:three_prime_utr;Parent=MsG0580024766.01.T01
Chr5 mRNA 9388339 9394355 9388339 ID=MsG0580024766.01.T02;Parent=MsG0580024766.01;Name=MsG0580024766.01.T02;_AED=0.21;_eAED=0.21;_QI=0|0.75|0.8|1|0.25|0|5|3419|159
Chr5 exon 9388339 9390511 9388339 ID=MsG0580024766.01.T02:exon:2909;Parent=MsG0580024766.01.T02
Chr5 exon 9390614 9391859 9390614 ID=MsG0580024766.01.T02:exon:2908;Parent=MsG0580024766.01.T02
Chr5 CDS 9394173 9394355 9394173 ID=MsG0580024766.01.T02:cds;Parent=MsG0580024766.01.T02
Chr5 CDS 9392793 9392941 9392793 ID=MsG0580024766.01.T02:cds;Parent=MsG0580024766.01.T02
Chr5 CDS 9391972 9392119 9391972 ID=MsG0580024766.01.T02:cds;Parent=MsG0580024766.01.T02
Chr5 three_prime_UTR 9390614 9391859 9390614 ID=MsG0580024766.01.T02:three_prime_utr;Parent=MsG0580024766.01.T02
Chr5 three_prime_UTR 9388339 9390511 9388339 ID=MsG0580024766.01.T02:three_prime_utr;Parent=MsG0580024766.01.T02
Gene Sequence

>MsG0580024766.01.T02

ATGGAGTTTCTTCCTGACTGTTTTGAGGCTGAAGAGAGGTCCTCTTATGAAACTCCTGAGGTTTTGCACTTGGTTTCAGGTCGTGATCTTTTTGGGATGGTTTGCCTAGTCAACAAGATTCCAGAGATATCATCTACTGAAAATGAAAAGTTACTTCTTACAGATCCTTCCATTCGGGCCTTTTTATACAGATTTTGGCTATTTGAGCCTCGCTGTGGCTTCCATGACATAGGAGGTTGGTATGTTGAAACATATGGCAAAGATAAGAAGGGTCGTACTATGCCGTCACAAAGGTTCTGGGATGGCTTGGATTATAGCGAGCAAGCTGAAAGAAGACTTCATCCAGCAATGTATCTGTTTGCTCTTGCATATCGAACGCTTGATCTTGAATATGCCAAAACAAGCAAGAAAACATTTAGAAATGCTATTGGAGCACATATGTTCCGAGTTCTTCACTGGTGCAGAAAACTTGTTCAATAG

>MsG0580024766.01.T01

ATGGAGTTTCTTCCTGACTGTTTTGAGGCTGAAGAGAGGTCCTCTTATGAAACTCCTGAGGTTTTGCACTTGGTTTCAGGTCGTGATCTTTTTGGGATGGTTTGCCTAGTCAACAAGATTCCAGAGATATCATCTACTGAAAATGAAAAGTTACTTCTTACAGATCCTTCCATTCGGGCCTTTTTATACAGATTTTGGCTATTTGAGCCTCGCTGTGGCTTCCATGACATAGGAGGTTGGTATGTTGAAACATATGGCAAAGATAAGAAGGGTCGTACTATGCCGTCACAAAGGTTCTGGGATGGCTTGGATTATAGCGAGCAAGCTGAAAGAAGACTTCATCCAGCAATGTATCTGTTTGCTCTTGCATATCGAACGCTTGATCTTGAATATGCCAAAACAAGCAAGAAAACATTTAGAAATGCTATTGGAGCACATATGTTCCGAGTTCTTCACTGGTGCAGAAAACTTGTTCAATAG

Protein sequence

>MsG0580024766.01.T02

MEFLPDCFEAEERSSYETPEVLHLVSGRDLFGMVCLVNKIPEISSTENEKLLLTDPSIRAFLYRFWLFEPRCGFHDIGGWYVETYGKDKKGRTMPSQRFWDGLDYSEQAERRLHPAMYLFALAYRTLDLEYAKTSKKTFRNAIGAHMFRVLHWCRKLVQ*

>MsG0580024766.01.T01

MEFLPDCFEAEERSSYETPEVLHLVSGRDLFGMVCLVNKIPEISSTENEKLLLTDPSIRAFLYRFWLFEPRCGFHDIGGWYVETYGKDKKGRTMPSQRFWDGLDYSEQAERRLHPAMYLFALAYRTLDLEYAKTSKKTFRNAIGAHMFRVLHWCRKLVQ*