Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280011451.01.T01 | XP_003597966.1 | 89.172 | 314 | 30 | 4 | 36 | 348 | 1 | 311 | 0 | 559 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280011451.01.T01 | Q9T072 | 38.462 | 221 | 120 | 5 | 131 | 345 | 116 | 326 | 6.13E-37 | 139 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280011451.01.T01 | G7IMA7 | 89.172 | 314 | 30 | 4 | 36 | 348 | 1 | 311 | 0.0 | 559 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048909.01 | MsG0280011451.01 | 0.814341 | 1.618982e-51 | 1.083478e-48 |
| MsG0080048969.01 | MsG0280011451.01 | 0.800881 | 1.170254e-48 | 5.510924e-46 |
| MsG0080049016.01 | MsG0280011451.01 | 0.832213 | 1.074625e-55 | 1.193080e-52 |
| MsG0080049018.01 | MsG0280011451.01 | 0.806427 | 8.271394e-50 | 4.488216e-47 |
| MsG0180000120.01 | MsG0280011451.01 | 0.803342 | 3.649359e-49 | 1.829290e-46 |
| MsG0180000455.01 | MsG0280011451.01 | 0.832965 | 6.995026e-56 | 7.942417e-53 |
| MsG0180000502.01 | MsG0280011451.01 | 0.801424 | 9.063791e-49 | 4.326969e-46 |
| MsG0180001827.01 | MsG0280011451.01 | 0.841038 | 6.053647e-58 | 8.784469e-55 |
| MsG0180001907.01 | MsG0280011451.01 | 0.824788 | 6.677761e-54 | 5.975265e-51 |
| MsG0180002982.01 | MsG0280011451.01 | 0.815669 | 8.213933e-52 | 5.699181e-49 |
| MsG0180003350.01 | MsG0280011451.01 | 0.806319 | 8.713786e-50 | 4.715253e-47 |
| MsG0180003442.01 | MsG0280011451.01 | 0.828163 | 1.047041e-54 | 1.032465e-51 |
| MsG0180003451.01 | MsG0280011451.01 | 0.808561 | 2.915752e-50 | 1.672491e-47 |
| MsG0180004193.01 | MsG0280011451.01 | 0.805348 | 1.394320e-49 | 7.359576e-47 |
| MsG0180004311.01 | MsG0280011451.01 | 0.813467 | 2.521864e-51 | 1.648282e-48 |
| MsG0180004580.01 | MsG0280011451.01 | 0.800506 | 1.396083e-48 | 6.511571e-46 |
| MsG0180004852.01 | MsG0280011451.01 | 0.803136 | 4.025445e-49 | 2.007217e-46 |
| MsG0180004865.01 | MsG0280011451.01 | 0.810160 | 1.323564e-50 | 7.920069e-48 |
| MsG0180005806.01 | MsG0280011451.01 | 0.822049 | 2.916507e-53 | 2.413997e-50 |
| MsG0180005991.01 | MsG0280011451.01 | 0.806663 | 7.372697e-50 | 4.024601e-47 |
| MsG0180006239.01 | MsG0280011451.01 | 0.818240 | 2.173583e-52 | 1.618016e-49 |
| MsG0280006451.01 | MsG0280011451.01 | 0.835738 | 1.408711e-56 | 1.738275e-53 |
| MsG0280010655.01 | MsG0280011451.01 | 0.802090 | 6.615639e-49 | 3.212075e-46 |
| MsG0280010905.01 | MsG0280011451.01 | 0.825980 | 3.485558e-54 | 3.226638e-51 |
| MsG0280011276.01 | MsG0280011451.01 | 0.803924 | 2.764163e-49 | 1.406595e-46 |
| MsG0280011449.01 | MsG0280011451.01 | 0.861172 | 1.236526e-63 | 3.466679e-60 |
| MsG0280011451.01 | MsG0380012251.01 | 0.804463 | 2.133994e-49 | 1.100997e-46 |
| MsG0280011451.01 | MsG0380012804.01 | 0.804889 | 1.738904e-49 | 9.071926e-47 |
| MsG0280011451.01 | MsG0380014558.01 | 0.817581 | 3.061369e-52 | 2.238175e-49 |
| MsG0280011451.01 | MsG0380014560.01 | 0.807646 | 4.565602e-50 | 2.556680e-47 |
| MsG0280011451.01 | MsG0380015501.01 | 0.832172 | 1.100025e-55 | 1.219812e-52 |
| MsG0280011451.01 | MsG0380015883.01 | 0.807309 | 5.383616e-50 | 2.988632e-47 |
| MsG0280011451.01 | MsG0380015897.01 | 0.812483 | 4.144439e-51 | 2.638349e-48 |
| MsG0280011451.01 | MsG0380015898.01 | 0.806374 | 8.486579e-50 | 4.598708e-47 |
| MsG0280011451.01 | MsG0380016086.01 | -0.816247 | 6.100791e-52 | 4.300542e-49 |
| MsG0280011451.01 | MsG0380016478.01 | 0.803319 | 3.690321e-49 | 1.848739e-46 |
| MsG0280011451.01 | MsG0380016530.01 | 0.810073 | 1.381884e-50 | 8.250524e-48 |
| MsG0280011451.01 | MsG0480018100.01 | 0.813291 | 2.756729e-51 | 1.793056e-48 |
| MsG0280011451.01 | MsG0480018323.01 | 0.811244 | 7.713544e-51 | 4.750321e-48 |
| MsG0280011451.01 | MsG0480018983.01 | 0.841749 | 3.933114e-58 | 5.835133e-55 |
| MsG0280011451.01 | MsG0480019693.01 | 0.842203 | 2.984800e-58 | 4.492091e-55 |
| MsG0280011451.01 | MsG0480019974.01 | 0.801903 | 7.227708e-49 | 3.492637e-46 |
| MsG0280011451.01 | MsG0480020122.01 | 0.800158 | 1.643398e-48 | 7.597539e-46 |
| MsG0280011451.01 | MsG0480021367.01 | 0.811791 | 5.867037e-51 | 3.665726e-48 |
| MsG0280011451.01 | MsG0480021420.01 | 0.808560 | 2.916662e-50 | 1.672995e-47 |
| MsG0280011451.01 | MsG0480021893.01 | 0.820133 | 8.055139e-53 | 6.320753e-50 |
| MsG0280011451.01 | MsG0480022138.01 | 0.810412 | 1.167912e-50 | 7.034927e-48 |
| MsG0280011451.01 | MsG0480022150.01 | 0.809761 | 1.612738e-50 | 9.551031e-48 |
| MsG0280011451.01 | MsG0480022297.01 | 0.857407 | 1.666546e-62 | 4.108871e-59 |
| MsG0280011451.01 | MsG0480022626.01 | 0.808700 | 2.722150e-50 | 1.567101e-47 |
| MsG0280011451.01 | MsG0480022804.01 | 0.801166 | 1.023679e-48 | 4.855375e-46 |
| MsG0280011451.01 | MsG0480023148.01 | 0.807846 | 4.140394e-50 | 2.330710e-47 |
| MsG0280011451.01 | MsG0480023166.01 | 0.807433 | 5.067362e-50 | 2.822042e-47 |
| MsG0280011451.01 | MsG0480023469.01 | 0.806184 | 9.305821e-50 | 5.018490e-47 |
| MsG0280011451.01 | MsG0480023616.01 | 0.801659 | 8.110145e-49 | 3.894754e-46 |
| MsG0280011451.01 | MsG0480023821.01 | 0.817873 | 2.630472e-52 | 1.938660e-49 |
| MsG0280011451.01 | MsG0480023850.01 | 0.817322 | 3.502640e-52 | 2.542625e-49 |
| MsG0280011451.01 | MsG0580024329.01 | 0.810548 | 1.091188e-50 | 6.596654e-48 |
| MsG0280011451.01 | MsG0580024665.01 | 0.813346 | 2.681938e-51 | 1.747063e-48 |
| MsG0280011451.01 | MsG0580025259.01 | 0.802124 | 6.509776e-49 | 3.163353e-46 |
| MsG0280011451.01 | MsG0580025373.01 | 0.816818 | 4.545259e-52 | 3.254333e-49 |
| MsG0280011451.01 | MsG0580025589.01 | 0.800471 | 1.419375e-48 | 6.614251e-46 |
| MsG0280011451.01 | MsG0580027410.01 | 0.813564 | 2.401607e-51 | 1.573699e-48 |
| MsG0280011451.01 | MsG0580028092.01 | 0.809983 | 1.444544e-50 | 8.604802e-48 |
| MsG0280011451.01 | MsG0580028800.01 | 0.802244 | 6.150762e-49 | 2.998148e-46 |
| MsG0280011451.01 | MsG0580029032.01 | 0.831508 | 1.604259e-55 | 1.744559e-52 |
| MsG0280011451.01 | MsG0580029918.01 | 0.818667 | 1.739462e-52 | 1.310247e-49 |
| MsG0280011451.01 | MsG0580030135.01 | -0.805879 | 1.078442e-49 | 5.770701e-47 |
| MsG0280011451.01 | MsG0680030399.01 | 0.822620 | 2.149148e-53 | 1.808362e-50 |
| MsG0280011451.01 | MsG0680030879.01 | 0.827893 | 1.216415e-54 | 1.189994e-51 |
| MsG0280011451.01 | MsG0680030896.01 | 0.855680 | 5.361164e-62 | 1.247836e-58 |
| MsG0280011451.01 | MsG0680033049.01 | 0.826632 | 2.438242e-54 | 2.299307e-51 |
| MsG0280011451.01 | MsG0780036424.01 | 0.816382 | 5.691714e-52 | 4.026892e-49 |
| MsG0280011451.01 | MsG0780036584.01 | 0.837505 | 4.996917e-57 | 6.504715e-54 |
| MsG0280011451.01 | MsG0780036881.01 | 0.820337 | 7.235578e-53 | 5.708989e-50 |
| MsG0280011451.01 | MsG0780037436.01 | 0.812690 | 3.733633e-51 | 2.389807e-48 |
| MsG0280011451.01 | MsG0780037655.01 | 0.801128 | 1.042055e-48 | 4.937928e-46 |
| MsG0280011451.01 | MsG0780038106.01 | 0.844020 | 9.790247e-59 | 1.560066e-55 |
| MsG0280011451.01 | MsG0780038334.01 | 0.807810 | 4.213515e-50 | 2.369691e-47 |
| MsG0280011451.01 | MsG0780038337.01 | 0.834046 | 3.757460e-56 | 4.406923e-53 |
| MsG0280011451.01 | MsG0780038341.01 | 0.803034 | 4.226075e-49 | 2.101752e-46 |
| MsG0280011451.01 | MsG0780039179.01 | 0.810232 | 1.276665e-50 | 7.653747e-48 |
| MsG0280011451.01 | MsG0780039339.01 | 0.811065 | 8.433404e-51 | 5.169341e-48 |
| MsG0280011451.01 | MsG0780039879.01 | 0.810790 | 9.674292e-51 | 5.886710e-48 |
| MsG0280011451.01 | MsG0780040644.01 | 0.805534 | 1.274652e-49 | 6.759988e-47 |
| MsG0280011451.01 | MsG0780040649.01 | 0.801961 | 7.032300e-49 | 3.403031e-46 |
| MsG0280011451.01 | MsG0780040701.01 | 0.802408 | 5.691232e-49 | 2.785796e-46 |
| MsG0280011451.01 | MsG0780041249.01 | 0.816388 | 5.672974e-52 | 4.014310e-49 |
| MsG0280011451.01 | MsG0780041617.01 | 0.824706 | 6.978970e-54 | 6.230453e-51 |
| MsG0280011451.01 | MsG0780041618.01 | 0.811630 | 6.358954e-51 | 3.956027e-48 |
| MsG0280011451.01 | MsG0780041640.01 | 0.842233 | 2.930764e-58 | 4.414843e-55 |
| MsG0280011451.01 | MsG0880042043.01 | 0.808273 | 3.359179e-50 | 1.912485e-47 |
| MsG0280011451.01 | MsG0880042895.01 | 0.827078 | 1.907864e-54 | 1.822674e-51 |
| MsG0280011451.01 | MsG0880042921.01 | 0.835327 | 1.789890e-56 | 2.181735e-53 |
| MsG0280011451.01 | MsG0880043032.01 | 0.800054 | 1.725587e-48 | 7.956781e-46 |
| MsG0280011451.01 | MsG0880043343.01 | 0.804628 | 1.971503e-49 | 1.021486e-46 |
| MsG0280011451.01 | MsG0880043913.01 | 0.830144 | 3.465511e-55 | 3.620422e-52 |
| MsG0280011451.01 | MsG0880044595.01 | 0.806953 | 6.403363e-50 | 3.521875e-47 |
| MsG0280011451.01 | MsG0880045073.01 | 0.813319 | 2.717901e-51 | 1.769179e-48 |
| MsG0280011451.01 | MsG0880045150.01 | 0.829969 | 3.822355e-55 | 3.972972e-52 |
| MsG0280011451.01 | MsG0880045259.01 | 0.828447 | 8.947519e-55 | 8.896059e-52 |
| MsG0280011451.01 | MsG0880045261.01 | 0.824851 | 6.450226e-54 | 5.782185e-51 |
| MsG0280011451.01 | MsG0880045283.01 | 0.803382 | 3.579909e-49 | 1.796341e-46 |
| MsG0280011451.01 | MsG0880045899.01 | 0.812097 | 5.032779e-51 | 3.170599e-48 |
| MsG0280011451.01 | MsG0880046288.01 | 0.809450 | 1.881211e-50 | 1.104832e-47 |
| MsG0280011451.01 | MsG0880046406.01 | 0.821792 | 3.344891e-53 | 2.748546e-50 |
| MsG0280011451.01 | MsG0880046456.01 | 0.801479 | 8.832324e-49 | 4.222380e-46 |
| MsG0280011451.01 | MsG0880046574.01 | 0.803699 | 3.078120e-49 | 1.557213e-46 |
| MsG0280011451.01 | MsG0880046584.01 | 0.835570 | 1.553763e-56 | 1.907474e-53 |
| MsG0280011451.01 | MsG0880046639.01 | 0.846361 | 2.279199e-59 | 3.913169e-56 |
| MsG0280011451.01 | MsG0880046968.01 | 0.806291 | 8.833741e-50 | 4.776833e-47 |
| MsG0280011451.01 | MsG0880047161.01 | 0.805426 | 1.342314e-49 | 7.099399e-47 |
| MsG0280011451.01 | MsG0880047669.01 | 0.817482 | 3.223455e-52 | 2.350383e-49 |
| MsG0280011451.01 | MsG0880047670.01 | 0.800066 | 1.715495e-48 | 7.912788e-46 |
| MsG0280006964.01 | MsG0280011451.01 | 0.825872 | 3.698099e-54 | 3.412902e-51 |
| MsG0280007036.01 | MsG0280011451.01 | 0.804780 | 1.833288e-49 | 9.536546e-47 |
| MsG0280007047.01 | MsG0280011451.01 | 0.813991 | 1.933844e-51 | 1.281926e-48 |
| MsG0280007079.01 | MsG0280011451.01 | 0.806021 | 1.007068e-49 | 5.408410e-47 |
| MsG0280007600.01 | MsG0280011451.01 | 0.811474 | 6.875882e-51 | 4.260374e-48 |
| MsG0280007800.01 | MsG0280011451.01 | 0.805356 | 1.388750e-49 | 7.331904e-47 |
| MsG0280007902.01 | MsG0280011451.01 | 0.818666 | 1.740300e-52 | 1.310828e-49 |
| MsG0280008939.01 | MsG0280011451.01 | 0.813266 | 2.791550e-51 | 1.814435e-48 |
| MsG0280008966.01 | MsG0280011451.01 | 0.807471 | 4.974657e-50 | 2.773282e-47 |
| MsG0280009434.01 | MsG0280011451.01 | 0.816073 | 6.671533e-52 | 4.680633e-49 |
| MsG0280010195.01 | MsG0280011451.01 | 0.814219 | 1.722304e-51 | 1.148771e-48 |
| MsG0280010461.01 | MsG0280011451.01 | 0.814970 | 1.174436e-51 | 7.994172e-49 |
| MsG0280010523.01 | MsG0280011451.01 | 0.805172 | 1.517413e-49 | 7.973396e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280011451.01.T01 | MTR_2g104490 | 89.172 | 314 | 30 | 4 | 36 | 348 | 1 | 311 | 0.0 | 559 |
| MsG0280011451.01.T01 | MTR_2g104490 | 90.690 | 290 | 23 | 4 | 36 | 324 | 1 | 287 | 0.0 | 526 |
| MsG0280011451.01.T01 | MTR_2g104550 | 78.981 | 314 | 56 | 6 | 36 | 343 | 1 | 310 | 5.28e-165 | 464 |
| MsG0280011451.01.T01 | MTR_4g009540 | 43.266 | 349 | 137 | 10 | 36 | 343 | 1 | 329 | 1.64e-74 | 234 |
| MsG0280011451.01.T01 | MTR_4g009110 | 42.577 | 357 | 147 | 10 | 36 | 343 | 1 | 348 | 4.03e-69 | 221 |
| MsG0280011451.01.T01 | MTR_4g009540 | 42.121 | 330 | 130 | 10 | 36 | 324 | 1 | 310 | 1.80e-65 | 210 |
| MsG0280011451.01.T01 | MTR_8g009020 | 47.934 | 242 | 113 | 6 | 111 | 343 | 84 | 321 | 2.23e-55 | 184 |
| MsG0280011451.01.T01 | MTR_2g104500 | 40.345 | 290 | 146 | 6 | 58 | 343 | 4 | 270 | 2.35e-54 | 180 |
| MsG0280011451.01.T01 | MTR_7g080780 | 37.278 | 338 | 171 | 6 | 36 | 343 | 1 | 327 | 1.15e-52 | 177 |
| MsG0280011451.01.T01 | MTR_7g080780 | 37.383 | 321 | 162 | 5 | 53 | 343 | 3 | 314 | 4.90e-51 | 173 |
| MsG0280011451.01.T01 | MTR_2g104530 | 46.117 | 206 | 105 | 3 | 143 | 345 | 72 | 274 | 1.00e-47 | 163 |
| MsG0280011451.01.T01 | MTR_8g009010 | 39.032 | 310 | 133 | 10 | 66 | 355 | 11 | 284 | 2.62e-46 | 160 |
| MsG0280011451.01.T01 | MTR_5g014520 | 43.277 | 238 | 106 | 5 | 116 | 339 | 102 | 324 | 2.83e-45 | 158 |
| MsG0280011451.01.T01 | MTR_8g069740 | 39.711 | 277 | 137 | 10 | 60 | 323 | 6 | 265 | 5.50e-43 | 150 |
| MsG0280011451.01.T01 | MTR_5g014600 | 38.436 | 307 | 139 | 11 | 76 | 343 | 38 | 333 | 6.53e-43 | 152 |
| MsG0280011451.01.T01 | MTR_6g047570 | 39.927 | 273 | 137 | 9 | 79 | 339 | 69 | 326 | 1.09e-41 | 149 |
| MsG0280011451.01.T01 | MTR_4g067010 | 40.670 | 209 | 117 | 3 | 140 | 343 | 109 | 315 | 9.91e-41 | 146 |
| MsG0280011451.01.T01 | MTR_0246s0020 | 39.759 | 249 | 124 | 6 | 116 | 339 | 122 | 369 | 1.25e-40 | 147 |
| MsG0280011451.01.T01 | MTR_0250s0040 | 43.850 | 187 | 99 | 4 | 157 | 339 | 71 | 255 | 2.31e-40 | 143 |
| MsG0280011451.01.T01 | MTR_4g066460 | 37.121 | 264 | 147 | 6 | 93 | 347 | 74 | 327 | 1.91e-39 | 143 |
| MsG0280011451.01.T01 | MTR_0011s0260 | 40.271 | 221 | 120 | 4 | 130 | 339 | 131 | 350 | 6.60e-39 | 142 |
| MsG0280011451.01.T01 | MTR_4g092700 | 45.402 | 174 | 93 | 1 | 174 | 345 | 158 | 331 | 4.87e-38 | 139 |
| MsG0280011451.01.T01 | MTR_0011s0210 | 40.271 | 221 | 120 | 4 | 130 | 339 | 131 | 350 | 5.89e-38 | 139 |
| MsG0280011451.01.T01 | MTR_2g010450 | 46.154 | 182 | 89 | 3 | 170 | 345 | 173 | 351 | 1.36e-37 | 138 |
| MsG0280011451.01.T01 | MTR_2g104560 | 42.932 | 191 | 95 | 3 | 156 | 339 | 36 | 219 | 2.10e-37 | 134 |
| MsG0280011451.01.T01 | MTR_4g097940 | 42.708 | 192 | 100 | 4 | 157 | 343 | 138 | 324 | 1.35e-36 | 135 |
| MsG0280011451.01.T01 | MTR_2g104650 | 35.374 | 294 | 150 | 9 | 60 | 344 | 6 | 268 | 2.51e-36 | 133 |
| MsG0280011451.01.T01 | MTR_4g097920 | 42.188 | 192 | 101 | 4 | 157 | 343 | 123 | 309 | 9.20e-36 | 132 |
| MsG0280011451.01.T01 | MTR_4g097920 | 42.188 | 192 | 101 | 4 | 157 | 343 | 138 | 324 | 1.24e-35 | 132 |
| MsG0280011451.01.T01 | MTR_2g104590 | 38.095 | 231 | 118 | 6 | 119 | 344 | 13 | 223 | 8.04e-35 | 128 |
| MsG0280011451.01.T01 | MTR_5g014560 | 43.850 | 187 | 99 | 3 | 157 | 339 | 114 | 298 | 8.61e-35 | 130 |
| MsG0280011451.01.T01 | MTR_0246s0020 | 38.397 | 237 | 120 | 6 | 116 | 327 | 122 | 357 | 3.00e-34 | 130 |
| MsG0280011451.01.T01 | MTR_0246s0050 | 39.227 | 181 | 101 | 3 | 161 | 339 | 138 | 311 | 2.07e-33 | 126 |
| MsG0280011451.01.T01 | MTR_4g098035 | 39.227 | 181 | 101 | 3 | 161 | 339 | 159 | 332 | 2.48e-33 | 127 |
| MsG0280011451.01.T01 | MTR_4g066380 | 36.800 | 250 | 140 | 6 | 93 | 339 | 82 | 316 | 5.72e-33 | 125 |
| MsG0280011451.01.T01 | MTR_5g014640 | 34.016 | 244 | 149 | 5 | 104 | 343 | 87 | 322 | 1.27e-32 | 124 |
| MsG0280011451.01.T01 | MTR_4g097950 | 39.604 | 202 | 105 | 3 | 154 | 339 | 44 | 244 | 5.57e-30 | 115 |
| MsG0280011451.01.T01 | MTR_7g451650 | 38.503 | 187 | 100 | 3 | 164 | 346 | 23 | 198 | 4.97e-28 | 108 |
| MsG0280011451.01.T01 | MTR_7g050350 | 42.857 | 140 | 66 | 2 | 203 | 339 | 1 | 129 | 4.09e-25 | 99.4 |
| MsG0280011451.01.T01 | MTR_7g451650 | 42.857 | 140 | 66 | 2 | 203 | 339 | 1 | 129 | 4.09e-25 | 99.4 |
| MsG0280011451.01.T01 | MTR_4g009510 | 39.759 | 166 | 84 | 4 | 185 | 346 | 53 | 206 | 7.56e-25 | 100 |
| MsG0280011451.01.T01 | MTR_4g009420 | 38.667 | 150 | 76 | 2 | 197 | 346 | 65 | 198 | 8.29e-23 | 95.1 |
| MsG0280011451.01.T01 | MTR_7g451650 | 38.788 | 165 | 86 | 3 | 164 | 324 | 23 | 176 | 1.02e-21 | 91.7 |
| MsG0280011451.01.T01 | MTR_4g009420 | 38.636 | 132 | 65 | 2 | 197 | 328 | 65 | 180 | 1.18e-16 | 78.2 |
| MsG0280011451.01.T01 | MTR_8g067280 | 29.379 | 177 | 102 | 3 | 150 | 308 | 438 | 609 | 1.29e-15 | 78.6 |
| MsG0280011451.01.T01 | MTR_5g030430 | 25.431 | 232 | 148 | 4 | 101 | 308 | 410 | 640 | 4.95e-15 | 77.0 |
| MsG0280011451.01.T01 | MTR_6g047550 | 46.835 | 79 | 42 | 0 | 174 | 252 | 173 | 251 | 6.43e-15 | 74.3 |
| MsG0280011451.01.T01 | MTR_8g024790 | 29.310 | 174 | 108 | 6 | 141 | 308 | 264 | 428 | 9.52e-15 | 75.5 |
| MsG0280011451.01.T01 | MTR_5g014550 | 39.516 | 124 | 69 | 3 | 204 | 323 | 54 | 175 | 3.05e-14 | 71.2 |
| MsG0280011451.01.T01 | MTR_8g027495 | 26.144 | 153 | 107 | 2 | 173 | 325 | 457 | 603 | 7.71e-13 | 70.1 |
| MsG0280011451.01.T01 | MTR_1g072320 | 23.618 | 199 | 139 | 4 | 158 | 343 | 454 | 652 | 1.28e-12 | 69.3 |
| MsG0280011451.01.T01 | MTR_7g117670 | 34.211 | 114 | 61 | 2 | 173 | 282 | 401 | 504 | 2.96e-12 | 68.2 |
| MsG0280011451.01.T01 | MTR_8g024770 | 25.000 | 176 | 116 | 6 | 142 | 308 | 251 | 419 | 5.11e-11 | 64.3 |
| MsG0280011451.01.T01 | MTR_7g096350 | 37.363 | 91 | 54 | 2 | 163 | 250 | 343 | 433 | 9.96e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280011451.01.T01 | AT4G37850 | 38.462 | 221 | 120 | 5 | 131 | 345 | 116 | 326 | 6.25e-38 | 139 |
| MsG0280011451.01.T01 | AT4G37850 | 38.462 | 221 | 120 | 5 | 131 | 345 | 116 | 326 | 6.25e-38 | 139 |
| MsG0280011451.01.T01 | AT2G22750 | 36.948 | 249 | 136 | 6 | 112 | 347 | 65 | 305 | 2.08e-33 | 126 |
| MsG0280011451.01.T01 | AT2G22750 | 36.948 | 249 | 136 | 6 | 112 | 347 | 93 | 333 | 2.32e-33 | 127 |
| MsG0280011451.01.T01 | AT2G22750 | 36.948 | 249 | 136 | 6 | 112 | 347 | 89 | 329 | 2.58e-33 | 126 |
| MsG0280011451.01.T01 | AT2G22760 | 41.667 | 180 | 99 | 3 | 166 | 339 | 111 | 290 | 4.57e-32 | 122 |
| MsG0280011451.01.T01 | AT2G22750 | 36.948 | 249 | 135 | 7 | 112 | 347 | 65 | 304 | 4.94e-32 | 122 |
| MsG0280011451.01.T01 | AT2G22750 | 36.948 | 249 | 135 | 7 | 112 | 347 | 93 | 332 | 5.45e-32 | 123 |
| MsG0280011451.01.T01 | AT2G22760 | 42.073 | 164 | 90 | 2 | 166 | 324 | 111 | 274 | 5.71e-28 | 111 |
| MsG0280011451.01.T01 | AT2G22770 | 35.638 | 188 | 104 | 2 | 174 | 344 | 132 | 319 | 7.87e-25 | 103 |
| MsG0280011451.01.T01 | AT5G46760 | 28.800 | 250 | 148 | 9 | 75 | 308 | 320 | 555 | 7.64e-17 | 82.4 |
| MsG0280011451.01.T01 | AT4G17880 | 27.650 | 217 | 141 | 5 | 97 | 308 | 347 | 552 | 2.66e-16 | 80.5 |
| MsG0280011451.01.T01 | AT4G09820 | 33.803 | 142 | 76 | 2 | 164 | 305 | 353 | 476 | 8.41e-16 | 79.0 |
| MsG0280011451.01.T01 | AT2G46510 | 36.800 | 125 | 62 | 4 | 157 | 280 | 377 | 485 | 2.10e-14 | 74.7 |
| MsG0280011451.01.T01 | AT1G32640 | 28.571 | 182 | 111 | 7 | 157 | 323 | 434 | 611 | 1.54e-12 | 69.3 |
| MsG0280011451.01.T01 | AT1G01260 | 39.706 | 68 | 40 | 1 | 161 | 227 | 419 | 486 | 9.75e-11 | 63.5 |
| MsG0280011451.01.T01 | AT1G01260 | 39.706 | 68 | 40 | 1 | 161 | 227 | 419 | 486 | 9.75e-11 | 63.5 |
| MsG0280011451.01.T01 | AT1G01260 | 39.706 | 68 | 40 | 1 | 161 | 227 | 419 | 486 | 9.75e-11 | 63.5 |
Find 83 sgRNAs with CRISPR-Local
Find 146 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAGTTGGATTCTGGATAAT+TGG | 0.153662 | 2:-84186880 | None:intergenic |
| CAGCAACCTGTTACATATTC+TGG | 0.210205 | 2:+84184773 | MsG0280011451.01.T01:CDS |
| ATTTACTGCTAGTTGGATTC+TGG | 0.230839 | 2:-84186888 | None:intergenic |
| GCTAGCAGTGTATTGGCTTT+TGG | 0.252967 | 2:+84185692 | MsG0280011451.01.T01:CDS |
| GATTCTTTGCTATTCTTGTT+TGG | 0.275304 | 2:-84185464 | None:intergenic |
| TTACTTCTACTCTTTGTTCT+TGG | 0.277856 | 2:-84184962 | None:intergenic |
| ACTTCTTGTTCTGATTCTTC+TGG | 0.307827 | 2:-84184938 | None:intergenic |
| TGATGTTAAAGCAAGAATAT+TGG | 0.324656 | 2:+84185574 | MsG0280011451.01.T01:CDS |
| GCACTTTCAGCTACTATTCC+TGG | 0.324686 | 2:+84185118 | MsG0280011451.01.T01:CDS |
| AGTAGTAGTAGCTGGTATTA+TGG | 0.354699 | 2:-84184912 | None:intergenic |
| AGCTAATGGAATGGGGATAA+GGG | 0.360309 | 2:-84184450 | None:intergenic |
| TACTCAAATTTACTGCTAGT+TGG | 0.363245 | 2:-84186895 | None:intergenic |
| TAGAAGTGGTTCTCAGTGTT+TGG | 0.364117 | 2:+84185042 | MsG0280011451.01.T01:CDS |
| TGTCACTGCTAGCAGTGTAT+TGG | 0.365840 | 2:+84185685 | MsG0280011451.01.T01:CDS |
| AAGCTAATGGAATGGGGATA+AGG | 0.375867 | 2:-84184451 | None:intergenic |
| TGAGCCATCCATCTCATTAG+AGG | 0.377502 | 2:-84184810 | None:intergenic |
| AAGTAATAATAAGAGGAGTT+TGG | 0.391916 | 2:+84184979 | MsG0280011451.01.T01:CDS |
| TCAGTGTTTGGATCACATTA+TGG | 0.401190 | 2:+84185054 | MsG0280011451.01.T01:CDS |
| CGAAATGACGGTGATTGATT+TGG | 0.404748 | 2:+84186546 | MsG0280011451.01.T01:CDS |
| CTGCTTCCAGAATATGTAAC+AGG | 0.414669 | 2:-84184779 | None:intergenic |
| CTGGATGAAGCTAATGGAAT+GGG | 0.417691 | 2:-84184458 | None:intergenic |
| TGTTGTTGACACATTACATA+AGG | 0.417949 | 2:+84186612 | MsG0280011451.01.T01:CDS |
| AGAGTAGAAGTAATAATAAG+AGG | 0.424376 | 2:+84184972 | MsG0280011451.01.T01:CDS |
| TGGCTTTACTATTGTCGCTC+AGG | 0.443880 | 2:+84185727 | MsG0280011451.01.T01:CDS |
| TAGTTGGATTCTGGATAATT+GGG | 0.445976 | 2:-84186879 | None:intergenic |
| GGAACATTGGCCTCTTCATT+CGG | 0.453854 | 2:+84184517 | MsG0280011451.01.T01:CDS |
| AGAACATCATGGAGGAATCA+TGG | 0.464890 | 2:+84184495 | MsG0280011451.01.T01:CDS |
| TTCTACTCTTCTTTCCACTT+TGG | 0.465419 | 2:-84185024 | None:intergenic |
| TTTATTACCTTCTTCAAGCC+AGG | 0.465921 | 2:-84185136 | None:intergenic |
| AAAGATAGAATAAATGTCCT+TGG | 0.468384 | 2:-84184878 | None:intergenic |
| AGCAAGAATATTGGAAAATG+AGG | 0.474113 | 2:+84185583 | MsG0280011451.01.T01:CDS |
| TAATGGTGACAATAGGAATT+GGG | 0.480317 | 2:+84184671 | MsG0280011451.01.T01:intron |
| TACCACCTCAAATTCTGATC+AGG | 0.481127 | 2:+84185529 | MsG0280011451.01.T01:CDS |
| TATTCACTGGATGAAGCTAA+TGG | 0.482747 | 2:-84184464 | None:intergenic |
| ATGGATGGCTCAGATTGCTC+AGG | 0.485183 | 2:+84184821 | MsG0280011451.01.T01:CDS |
| GAGTATATTTCTTCAATCAA+AGG | 0.509904 | 2:+84186913 | MsG0280011451.01.T01:three_prime_UTR |
| TGGAGGAATCATGGGAACAT+TGG | 0.515296 | 2:+84184504 | MsG0280011451.01.T01:CDS |
| TACTATTCCTGGCTTGAAGA+AGG | 0.517604 | 2:+84185129 | MsG0280011451.01.T01:CDS |
| CCTCGGCAGTTAACTGCAGT+CGG | 0.518963 | 2:-84186699 | None:intergenic |
| TCTGGTGTAGTAGTAGTAGC+TGG | 0.520741 | 2:-84184920 | None:intergenic |
| GGAATGGGGATAAGGGAGGA+TGG | 0.529986 | 2:-84184443 | None:intergenic |
| ATAGGAATTGGGTGATGTTG+AGG | 0.530496 | 2:+84184682 | MsG0280011451.01.T01:intron |
| GCAATCCTGATCAGAATTTG+AGG | 0.532272 | 2:-84185534 | None:intergenic |
| ACTGGATGAAGCTAATGGAA+TGG | 0.547841 | 2:-84184459 | None:intergenic |
| TCTTTCATCCTCTAATGAGA+TGG | 0.562481 | 2:+84184802 | MsG0280011451.01.T01:CDS |
| AGTGGAAAGAAGAGTAGAAG+TGG | 0.563816 | 2:+84185028 | MsG0280011451.01.T01:CDS |
| TAATGGAATGGGGATAAGGG+AGG | 0.565036 | 2:-84184447 | None:intergenic |
| GTTCTGTGATGTGTATTCAC+TGG | 0.566034 | 2:-84184477 | None:intergenic |
| GGTGATGTTGAGGATTTGCT+AGG | 0.567202 | 2:+84184692 | MsG0280011451.01.T01:CDS |
| CTTCGGCAGTTAACTGCCGA+GGG | 0.577695 | 2:-84186666 | None:intergenic |
| TCTTCGGCAGTTAACTGCCG+AGG | 0.580644 | 2:-84186667 | None:intergenic |
| TAGAATAAATGTCCTTGGAG+TGG | 0.581040 | 2:-84184873 | None:intergenic |
| ATGGACAAGAACTATATACT+TGG | 0.584966 | 2:+84185386 | MsG0280011451.01.T01:CDS |
| GCAAAAGCAAGTAACCAAAG+TGG | 0.587147 | 2:+84185010 | MsG0280011451.01.T01:CDS |
| TGGACGGTGTTGATGAAGGA+TGG | 0.592345 | 2:-84184853 | None:intergenic |
| AAGTAATTAATGTTTGATCG+TGG | 0.592571 | 2:+84184389 | None:intergenic |
| GGAGTGGACGGTGTTGATGA+AGG | 0.594219 | 2:-84184857 | None:intergenic |
| GAACATCATGGAGGAATCAT+GGG | 0.596545 | 2:+84184496 | MsG0280011451.01.T01:CDS |
| GGTGTCTTGCAGATGGGTGA+AGG | 0.598134 | 2:+84186520 | MsG0280011451.01.T01:intron |
| ATAAATGTCCTTGGAGTGGA+CGG | 0.600736 | 2:-84184869 | None:intergenic |
| GGGTGAAGGGTACGAAATGA+CGG | 0.601090 | 2:+84186534 | MsG0280011451.01.T01:CDS |
| TCCTCGGCAGTTAACTACCG+AGG | 0.601197 | 2:-84186726 | None:intergenic |
| CATTCAGATCCACTGTGAGA+AGG | 0.601974 | 2:+84185610 | MsG0280011451.01.T01:CDS |
| TCATCCTCTAATGAGATGGA+TGG | 0.603818 | 2:+84184806 | MsG0280011451.01.T01:CDS |
| CTTGCTTTAACATCAAAGAG+TGG | 0.605135 | 2:-84185566 | None:intergenic |
| AATATGTAACAGGTTGCTGA+AGG | 0.616197 | 2:-84184769 | None:intergenic |
| CATCAACACCGTCCACTCCA+AGG | 0.620000 | 2:+84184861 | MsG0280011451.01.T01:CDS |
| ATACACATCACAGAACATCA+TGG | 0.634001 | 2:+84184484 | MsG0280011451.01.T01:CDS |
| GTGTCTTGCAGATGGGTGAA+GGG | 0.634582 | 2:+84186521 | MsG0280011451.01.T01:intron |
| ACCTCGGTAGTTAACTGCCG+AGG | 0.639567 | 2:+84186725 | MsG0280011451.01.T01:three_prime_UTR |
| TCGGCAGTTAACTGCCGAGG+GGG | 0.642604 | 2:-84186664 | None:intergenic |
| AGAACGTGTGAAGGAGCTAG+AGG | 0.643700 | 2:+84185439 | MsG0280011451.01.T01:CDS |
| GTGATGTTGAGGATTTGCTA+GGG | 0.643753 | 2:+84184693 | MsG0280011451.01.T01:CDS |
| TACTCGGTAGTTAACTACCG+AGG | 0.653578 | 2:-84186767 | None:intergenic |
| ACTACTTCAAGAACGTGTGA+AGG | 0.653803 | 2:+84185430 | MsG0280011451.01.T01:CDS |
| CCGACTGCAGTTAACTGCCG+AGG | 0.656056 | 2:+84186699 | MsG0280011451.01.T01:three_prime_UTR |
| TTAACTGCCGAGGAAAACCT+CGG | 0.663108 | 2:+84186709 | MsG0280011451.01.T01:three_prime_UTR |
| TGGATGGCTCAGATTGCTCA+GGG | 0.676528 | 2:+84184822 | MsG0280011451.01.T01:CDS |
| TGTCAATTTCCTTCTCACAG+TGG | 0.679003 | 2:-84185619 | None:intergenic |
| TGGATGAAGCTAATGGAATG+GGG | 0.684423 | 2:-84184457 | None:intergenic |
| ATCCTGATCAGAATTTGAGG+TGG | 0.691103 | 2:-84185531 | None:intergenic |
| TTCGGCAGTTAACTGCCGAG+GGG | 0.705924 | 2:-84186665 | None:intergenic |
| CACATCACAGAACATCATGG+AGG | 0.746318 | 2:+84184487 | MsG0280011451.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAAAAAAACAAAAAAAAA+AGG | - | Chr2:84186835-84186854 | None:intergenic | 10.0% |
| !! | AGAAAAAAACAAAAAAAAAA+GGG | - | Chr2:84186834-84186853 | None:intergenic | 10.0% |
| !! | TAAATAATCATTTCAATTAA+TGG | + | Chr2:84184654-84184673 | MsG0280011451.01.T01:intron | 10.0% |
| !!! | TATAATATCATAATGTTTTA+TGG | - | Chr2:84185779-84185798 | None:intergenic | 10.0% |
| !! | AATGTTTAGCTATTTAAATA+TGG | - | Chr2:84186100-84186119 | None:intergenic | 15.0% |
| !! | ATGTTTAGCTATTTAAATAT+GGG | - | Chr2:84186099-84186118 | None:intergenic | 15.0% |
| !! | CAATCTAATATTTAATAACA+TGG | + | Chr2:84186499-84186518 | MsG0280011451.01.T01:intron | 15.0% |
| !! | TGCATAAATTAATTAATAGA+TGG | + | Chr2:84185367-84185386 | MsG0280011451.01.T01:intron | 15.0% |
| !!! | AATTATTTTAATCAAGTTGT+AGG | + | Chr2:84186246-84186265 | MsG0280011451.01.T01:intron | 15.0% |
| !! | AAACAATATTAGAAAAACCT+CGG | + | Chr2:84186750-84186769 | MsG0280011451.01.T01:three_prime_UTR | 20.0% |
| !! | AGACGTTTGATAAATTTATA+AGG | - | Chr2:84185874-84185893 | None:intergenic | 20.0% |
| !! | CTCATGAGATAATATTTAAA+GGG | + | Chr2:84185892-84185911 | MsG0280011451.01.T01:intron | 20.0% |
| !! | TATTAATGAATAGTTTGACT+TGG | - | Chr2:84186195-84186214 | None:intergenic | 20.0% |
| !! | TCTCATGAGATAATATTTAA+AGG | + | Chr2:84185891-84185910 | MsG0280011451.01.T01:intron | 20.0% |
| !!! | ATGGTAATAATTCACTTTTA+TGG | + | Chr2:84186034-84186053 | MsG0280011451.01.T01:intron | 20.0% |
| !!! | ATTAAGAGCACTAATTAAAT+TGG | - | Chr2:84185176-84185195 | None:intergenic | 20.0% |
| !!! | ATTTTATAACGGATTGAATT+GGG | + | Chr2:84185329-84185348 | MsG0280011451.01.T01:intron | 20.0% |
| !!! | TATTTTATAACGGATTGAAT+TGG | + | Chr2:84185328-84185347 | MsG0280011451.01.T01:intron | 20.0% |
| !!! | TCAAAAACAGTTTTCTTTTA+TGG | + | Chr2:84186015-84186034 | MsG0280011451.01.T01:intron | 20.0% |
| !!! | TTAAGAGCACTAATTAAATT+GGG | - | Chr2:84185175-84185194 | None:intergenic | 20.0% |
| !!! | TTTCTAATATTGTTTTTCCT+CGG | - | Chr2:84186745-84186764 | None:intergenic | 20.0% |
| ! | AAAAAAAAAAGGGATTGAAG+TGG | - | Chr2:84186824-84186843 | None:intergenic | 25.0% |
| ! | AAAGATAGAATAAATGTCCT+TGG | - | Chr2:84184881-84184900 | None:intergenic | 25.0% |
| ! | AAGTAATAATAAGAGGAGTT+TGG | + | Chr2:84184979-84184998 | MsG0280011451.01.T01:CDS | 25.0% |
| ! | ACTGGTTAAAGATATGAAAA+AGG | + | Chr2:84185940-84185959 | MsG0280011451.01.T01:intron | 25.0% |
| ! | AGAGTAGAAGTAATAATAAG+AGG | + | Chr2:84184972-84184991 | MsG0280011451.01.T01:CDS | 25.0% |
| ! | ATGAAGAAGAAGAAAAAAGA+AGG | - | Chr2:84186801-84186820 | None:intergenic | 25.0% |
| ! | GAGTATATTTCTTCAATCAA+AGG | + | Chr2:84186913-84186932 | MsG0280011451.01.T01:three_prime_UTR | 25.0% |
| ! | TGAAGAAGAAGAAAAAAGAA+GGG | - | Chr2:84186800-84186819 | None:intergenic | 25.0% |
| ! | TGATGTTAAAGCAAGAATAT+TGG | + | Chr2:84185574-84185593 | MsG0280011451.01.T01:CDS | 25.0% |
| ! | TTTATGTCAGAAAATAGTAC+TGG | - | Chr2:84184638-84184657 | None:intergenic | 25.0% |
| ! | TTTCAATTAATGGTGACAAT+AGG | + | Chr2:84184664-84184683 | MsG0280011451.01.T01:intron | 25.0% |
| !!! | TGTTCTATGTCATTTTTTTG+AGG | + | Chr2:84184586-84184605 | MsG0280011451.01.T01:intron | 25.0% |
| !!! | TTGGCTACTATTTTATTTAC+TGG | - | Chr2:84186176-84186195 | None:intergenic | 25.0% |
| AGAAGAACATATTAATCCCT+CGG | - | Chr2:84185277-84185296 | None:intergenic | 30.0% | |
| AGCAAGAATATTGGAAAATG+AGG | + | Chr2:84185583-84185602 | MsG0280011451.01.T01:CDS | 30.0% | |
| ATGGACAAGAACTATATACT+TGG | + | Chr2:84185386-84185405 | MsG0280011451.01.T01:CDS | 30.0% | |
| ATTTAAAGGGAAATGCTAAC+CGG | + | Chr2:84185905-84185924 | MsG0280011451.01.T01:intron | 30.0% | |
| TAATGGTGACAATAGGAATT+GGG | + | Chr2:84184671-84184690 | MsG0280011451.01.T01:intron | 30.0% | |
| TACTCAAATTTACTGCTAGT+TGG | - | Chr2:84186898-84186917 | None:intergenic | 30.0% | |
| TAGTTGGATTCTGGATAATT+GGG | - | Chr2:84186882-84186901 | None:intergenic | 30.0% | |
| TGTTGTTGACACATTACATA+AGG | + | Chr2:84186612-84186631 | MsG0280011451.01.T01:CDS | 30.0% | |
| TTAATGGTGACAATAGGAAT+TGG | + | Chr2:84184670-84184689 | MsG0280011451.01.T01:intron | 30.0% | |
| TTACTTCTACTCTTTGTTCT+TGG | - | Chr2:84184965-84184984 | None:intergenic | 30.0% | |
| ! | CAGTCGGATTTTAAATTCTT+CGG | - | Chr2:84186686-84186705 | None:intergenic | 30.0% |
| !! | AGTATTTTTACCGAATGAAG+AGG | - | Chr2:84184530-84184549 | None:intergenic | 30.0% |
| !! | GATTCTTTGCTATTCTTGTT+TGG | - | Chr2:84185467-84185486 | None:intergenic | 30.0% |
| !! | TTTTATTTACTGGACCTTGA+TGG | - | Chr2:84186166-84186185 | None:intergenic | 30.0% |
| AATATGTAACAGGTTGCTGA+AGG | - | Chr2:84184772-84184791 | None:intergenic | 35.0% | |
| ACTTCTTGTTCTGATTCTTC+TGG | - | Chr2:84184941-84184960 | None:intergenic | 35.0% | |
| AGTAGTAGTAGCTGGTATTA+TGG | - | Chr2:84184915-84184934 | None:intergenic | 35.0% | |
| ATACACATCACAGAACATCA+TGG | + | Chr2:84184484-84184503 | MsG0280011451.01.T01:CDS | 35.0% | |
| ATATCTTTAACCAGTGTCTC+GGG | - | Chr2:84185935-84185954 | None:intergenic | 35.0% | |
| ATTTACTGCTAGTTGGATTC+TGG | - | Chr2:84186891-84186910 | None:intergenic | 35.0% | |
| CATATCTTTAACCAGTGTCT+CGG | - | Chr2:84185936-84185955 | None:intergenic | 35.0% | |
| CTAAATGTTCCATTCCATCA+AGG | + | Chr2:84186149-84186168 | MsG0280011451.01.T01:intron | 35.0% | |
| CTAGTTGGATTCTGGATAAT+TGG | - | Chr2:84186883-84186902 | None:intergenic | 35.0% | |
| CTTGCTTTAACATCAAAGAG+TGG | - | Chr2:84185569-84185588 | None:intergenic | 35.0% | |
| TAGAATAAATGTCCTTGGAG+TGG | - | Chr2:84184876-84184895 | None:intergenic | 35.0% | |
| TATTCACTGGATGAAGCTAA+TGG | - | Chr2:84184467-84184486 | None:intergenic | 35.0% | |
| TCAGTGTTTGGATCACATTA+TGG | + | Chr2:84185054-84185073 | MsG0280011451.01.T01:CDS | 35.0% | |
| TCTTTCATCCTCTAATGAGA+TGG | + | Chr2:84184802-84184821 | MsG0280011451.01.T01:CDS | 35.0% | |
| TTAATCCCTCGGTTAAATAC+CGG | - | Chr2:84185266-84185285 | None:intergenic | 35.0% | |
| TTCTACTCTTCTTTCCACTT+TGG | - | Chr2:84185027-84185046 | None:intergenic | 35.0% | |
| TTTATTACCTTCTTCAAGCC+AGG | - | Chr2:84185139-84185158 | None:intergenic | 35.0% | |
| ! | AAAGAAGGGTCTGTTTTACT+CGG | - | Chr2:84186786-84186805 | None:intergenic | 35.0% |
| !! | GTAGAAAGATTGATTTGTCC+CGG | + | Chr2:84185244-84185263 | MsG0280011451.01.T01:intron | 35.0% |
| !! | TGGTTACTTGCTTTTGCTTT+TGG | - | Chr2:84185007-84185026 | None:intergenic | 35.0% |
| AAGCTAATGGAATGGGGATA+AGG | - | Chr2:84184454-84184473 | None:intergenic | 40.0% | |
| ACTACTTCAAGAACGTGTGA+AGG | + | Chr2:84185430-84185449 | MsG0280011451.01.T01:CDS | 40.0% | |
| ACTGGATGAAGCTAATGGAA+TGG | - | Chr2:84184462-84184481 | None:intergenic | 40.0% | |
| AGAACATCATGGAGGAATCA+TGG | + | Chr2:84184495-84184514 | MsG0280011451.01.T01:CDS | 40.0% | |
| AGCTAATGGAATGGGGATAA+GGG | - | Chr2:84184453-84184472 | None:intergenic | 40.0% | |
| AGTGGAAAGAAGAGTAGAAG+TGG | + | Chr2:84185028-84185047 | MsG0280011451.01.T01:CDS | 40.0% | |
| ATAAATGTCCTTGGAGTGGA+CGG | - | Chr2:84184872-84184891 | None:intergenic | 40.0% | |
| ATAACATGGTGTCTTGCAGA+TGG | + | Chr2:84186513-84186532 | MsG0280011451.01.T01:intron | 40.0% | |
| ATAGGAATTGGGTGATGTTG+AGG | + | Chr2:84184682-84184701 | MsG0280011451.01.T01:intron | 40.0% | |
| ATCCTGATCAGAATTTGAGG+TGG | - | Chr2:84185534-84185553 | None:intergenic | 40.0% | |
| CAGCAACCTGTTACATATTC+TGG | + | Chr2:84184773-84184792 | MsG0280011451.01.T01:CDS | 40.0% | |
| CGAAATGACGGTGATTGATT+TGG | + | Chr2:84186546-84186565 | MsG0280011451.01.T01:CDS | 40.0% | |
| CTGCTTCCAGAATATGTAAC+AGG | - | Chr2:84184782-84184801 | None:intergenic | 40.0% | |
| CTGGATGAAGCTAATGGAAT+GGG | - | Chr2:84184461-84184480 | None:intergenic | 40.0% | |
| GAACATCATGGAGGAATCAT+GGG | + | Chr2:84184496-84184515 | MsG0280011451.01.T01:CDS | 40.0% | |
| GCAAAAGCAAGTAACCAAAG+TGG | + | Chr2:84185010-84185029 | MsG0280011451.01.T01:CDS | 40.0% | |
| GCAATCCTGATCAGAATTTG+AGG | - | Chr2:84185537-84185556 | None:intergenic | 40.0% | |
| GTTCTGTGATGTGTATTCAC+TGG | - | Chr2:84184480-84184499 | None:intergenic | 40.0% | |
| TAACATGGTGTCTTGCAGAT+GGG | + | Chr2:84186514-84186533 | MsG0280011451.01.T01:intron | 40.0% | |
| TAATCCCTCGGTTAAATACC+GGG | - | Chr2:84185265-84185284 | None:intergenic | 40.0% | |
| TACCACCTCAAATTCTGATC+AGG | + | Chr2:84185529-84185548 | MsG0280011451.01.T01:CDS | 40.0% | |
| TAGAAGTGGTTCTCAGTGTT+TGG | + | Chr2:84185042-84185061 | MsG0280011451.01.T01:CDS | 40.0% | |
| TATCTTTAACCAGTGTCTCG+GGG | - | Chr2:84185934-84185953 | None:intergenic | 40.0% | |
| TCATCCTCTAATGAGATGGA+TGG | + | Chr2:84184806-84184825 | MsG0280011451.01.T01:CDS | 40.0% | |
| TGGATGAAGCTAATGGAATG+GGG | - | Chr2:84184460-84184479 | None:intergenic | 40.0% | |
| TGTCAATTTCCTTCTCACAG+TGG | - | Chr2:84185622-84185641 | None:intergenic | 40.0% | |
| TTTACTGGACCTTGATGGAA+TGG | - | Chr2:84186161-84186180 | None:intergenic | 40.0% | |
| ! | AAAATACGATTTTGCCCCCT+CGG | + | Chr2:84186650-84186669 | MsG0280011451.01.T01:exon | 40.0% |
| ! | TACTATTCCTGGCTTGAAGA+AGG | + | Chr2:84185129-84185148 | MsG0280011451.01.T01:CDS | 40.0% |
| ! | TTAACTACCGAGGTTTTCCT+CGG | - | Chr2:84186719-84186738 | None:intergenic | 40.0% |
| !! | GTGATGTTGAGGATTTGCTA+GGG | + | Chr2:84184693-84184712 | MsG0280011451.01.T01:CDS | 40.0% |
| !!! | GCTTTTGGAACTTCAACTCT+TGG | + | Chr2:84185707-84185726 | MsG0280011451.01.T01:CDS | 40.0% |
| CACATCACAGAACATCATGG+AGG | + | Chr2:84184487-84184506 | MsG0280011451.01.T01:CDS | 45.0% | |
| CATTCAGATCCACTGTGAGA+AGG | + | Chr2:84185610-84185629 | MsG0280011451.01.T01:CDS | 45.0% | |
| GCACTTTCAGCTACTATTCC+TGG | + | Chr2:84185118-84185137 | MsG0280011451.01.T01:CDS | 45.0% | |
| TAAATATGGGTCCCGCTAAC+CGG | - | Chr2:84186086-84186105 | None:intergenic | 45.0% | |
| TAATGGAATGGGGATAAGGG+AGG | - | Chr2:84184450-84184469 | None:intergenic | 45.0% | |
| TACTCGGTAGTTAACTACCG+AGG | - | Chr2:84186770-84186789 | None:intergenic | 45.0% | |
| TCTGGTGTAGTAGTAGTAGC+TGG | - | Chr2:84184923-84184942 | None:intergenic | 45.0% | |
| TGAGCCATCCATCTCATTAG+AGG | - | Chr2:84184813-84184832 | None:intergenic | 45.0% | |
| TGGAGGAATCATGGGAACAT+TGG | + | Chr2:84184504-84184523 | MsG0280011451.01.T01:CDS | 45.0% | |
| TGTCACTGCTAGCAGTGTAT+TGG | + | Chr2:84185685-84185704 | MsG0280011451.01.T01:CDS | 45.0% | |
| TTAACTGCCGAGGAAAACCT+CGG | + | Chr2:84186709-84186728 | MsG0280011451.01.T01:three_prime_UTR | 45.0% | |
| TTGTCCCGGTATTTAACCGA+GGG | + | Chr2:84185258-84185277 | MsG0280011451.01.T01:intron | 45.0% | |
| TTTGTCCCGGTATTTAACCG+AGG | + | Chr2:84185257-84185276 | MsG0280011451.01.T01:intron | 45.0% | |
| ! | GGAACATTGGCCTCTTCATT+CGG | + | Chr2:84184517-84184536 | MsG0280011451.01.T01:CDS | 45.0% |
| ! | GGTGATGTTGAGGATTTGCT+AGG | + | Chr2:84184692-84184711 | MsG0280011451.01.T01:CDS | 45.0% |
| ! | TGGCTTTACTATTGTCGCTC+AGG | + | Chr2:84185727-84185746 | MsG0280011451.01.T01:CDS | 45.0% |
| !!! | GCTAGCAGTGTATTGGCTTT+TGG | + | Chr2:84185692-84185711 | MsG0280011451.01.T01:CDS | 45.0% |
| !!! | TTAATGATTTTATTTTATAA+CGG | + | Chr2:84185318-84185337 | MsG0280011451.01.T01:intron | 5.0% |
| AGAACGTGTGAAGGAGCTAG+AGG | + | Chr2:84185439-84185458 | MsG0280011451.01.T01:CDS | 50.0% | |
| ATGGATGGCTCAGATTGCTC+AGG | + | Chr2:84184821-84184840 | MsG0280011451.01.T01:CDS | 50.0% | |
| GTGTCTTGCAGATGGGTGAA+GGG | + | Chr2:84186521-84186540 | MsG0280011451.01.T01:intron | 50.0% | |
| TATGATTAACCAGTGCCCCG+AGG | + | Chr2:84186057-84186076 | MsG0280011451.01.T01:intron | 50.0% | |
| TGGATGGCTCAGATTGCTCA+GGG | + | Chr2:84184822-84184841 | MsG0280011451.01.T01:CDS | 50.0% | |
| ! | GGGTGAAGGGTACGAAATGA+CGG | + | Chr2:84186534-84186553 | MsG0280011451.01.T01:CDS | 50.0% |
| !! | TGGACGGTGTTGATGAAGGA+TGG | - | Chr2:84184856-84184875 | None:intergenic | 50.0% |
| ACCTCGGTAGTTAACTGCCG+AGG | + | Chr2:84186725-84186744 | MsG0280011451.01.T01:three_prime_UTR | 55.0% | |
| CATCAACACCGTCCACTCCA+AGG | + | Chr2:84184861-84184880 | MsG0280011451.01.T01:CDS | 55.0% | |
| CCTCGGCAGTTAACTGCAGT+CGG | - | Chr2:84186702-84186721 | None:intergenic | 55.0% | |
| CTTCGGCAGTTAACTGCCGA+GGG | - | Chr2:84186669-84186688 | None:intergenic | 55.0% | |
| GGAATGGGGATAAGGGAGGA+TGG | - | Chr2:84184446-84184465 | None:intergenic | 55.0% | |
| GGTGTCTTGCAGATGGGTGA+AGG | + | Chr2:84186520-84186539 | MsG0280011451.01.T01:intron | 55.0% | |
| TCCTCGGCAGTTAACTACCG+AGG | - | Chr2:84186729-84186748 | None:intergenic | 55.0% | |
| TCTTCGGCAGTTAACTGCCG+AGG | - | Chr2:84186670-84186689 | None:intergenic | 55.0% | |
| TTCGGCAGTTAACTGCCGAG+GGG | - | Chr2:84186668-84186687 | None:intergenic | 55.0% | |
| !! | GGAGTGGACGGTGTTGATGA+AGG | - | Chr2:84184860-84184879 | None:intergenic | 55.0% |
| AACCAGTGTCTCGGGGACAC+CGG | - | Chr2:84185927-84185946 | None:intergenic | 60.0% | |
| CCGACTGCAGTTAACTGCCG+AGG | + | Chr2:84186699-84186718 | MsG0280011451.01.T01:three_prime_UTR | 60.0% | |
| TCGGCAGTTAACTGCCGAGG+GGG | - | Chr2:84186667-84186686 | None:intergenic | 60.0% | |
| AACCAGTGCCCCGAGGACAC+CGG | + | Chr2:84186064-84186083 | MsG0280011451.01.T01:intron | 65.0% | |
| AACCGGTGTCCCCGAGACAC+TGG | + | Chr2:84185922-84185941 | MsG0280011451.01.T01:intron | 65.0% | |
| GTCCCGCTAACCGGTGTCCT+CGG | - | Chr2:84186077-84186096 | None:intergenic | 65.0% | |
| TCCCGCTAACCGGTGTCCTC+GGG | - | Chr2:84186076-84186095 | None:intergenic | 65.0% | |
| AACCGGTGTCCTCGGGGCAC+TGG | - | Chr2:84186069-84186088 | None:intergenic | 70.0% | |
| CCCGCTAACCGGTGTCCTCG+GGG | - | Chr2:84186075-84186094 | None:intergenic | 70.0% | |
| ! | CCCCGAGGACACCGGTTAGC+GGG | + | Chr2:84186072-84186091 | MsG0280011451.01.T01:intron | 70.0% |
| ! | GCCCCGAGGACACCGGTTAG+CGG | + | Chr2:84186071-84186090 | MsG0280011451.01.T01:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 84184398 | 84186970 | 84184398 | ID=MsG0280011451.01;Name=MsG0280011451.01 |
| Chr2 | mRNA | 84184398 | 84186970 | 84184398 | ID=MsG0280011451.01.T01;Parent=MsG0280011451.01;Name=MsG0280011451.01.T01;_AED=0.32;_eAED=0.32;_QI=0|1|0.75|1|1|1|4|319|362 |
| Chr2 | exon | 84184398 | 84184538 | 84184398 | ID=MsG0280011451.01.T01:exon:12611;Parent=MsG0280011451.01.T01 |
| Chr2 | exon | 84184686 | 84185150 | 84184686 | ID=MsG0280011451.01.T01:exon:12612;Parent=MsG0280011451.01.T01 |
| Chr2 | exon | 84185386 | 84185748 | 84185386 | ID=MsG0280011451.01.T01:exon:12613;Parent=MsG0280011451.01.T01 |
| Chr2 | exon | 84186532 | 84186970 | 84186532 | ID=MsG0280011451.01.T01:exon:12614;Parent=MsG0280011451.01.T01 |
| Chr2 | CDS | 84184398 | 84184538 | 84184398 | ID=MsG0280011451.01.T01:cds;Parent=MsG0280011451.01.T01 |
| Chr2 | CDS | 84184686 | 84185150 | 84184686 | ID=MsG0280011451.01.T01:cds;Parent=MsG0280011451.01.T01 |
| Chr2 | CDS | 84185386 | 84185748 | 84185386 | ID=MsG0280011451.01.T01:cds;Parent=MsG0280011451.01.T01 |
| Chr2 | CDS | 84186532 | 84186651 | 84186532 | ID=MsG0280011451.01.T01:cds;Parent=MsG0280011451.01.T01 |
| Chr2 | three_prime_UTR | 84186652 | 84186970 | 84186652 | ID=MsG0280011451.01.T01:three_prime_utr;Parent=MsG0280011451.01.T01 |
| Gene Sequence |
| Protein sequence |
