AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010195.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010195.01.T01 MTR_2g085340 93.787 338 8 1 1 338 1 325 0.0 639
MsG0280010195.01.T01 MTR_2g085340 92.958 284 7 1 1 284 1 271 0.0 530
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010195.01.T01 AT1G53120 62.275 334 108 5 6 338 4 320 6.65e-150 424
MsG0280010195.01.T01 AT1G53120 62.275 334 107 6 6 338 4 319 3.26e-148 420

Find 74 sgRNAs with CRISPR-Local

Find 406 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACTTCCTTGGCTCAATTCT+TGG 0.207293 2:-66022909 MsG0280010195.01.T01:CDS
GTTCTTTGCTCTTCTCTTCC+AGG 0.220937 2:+66019305 None:intergenic
TAGTGGATTGGGAAGATTAA+AGG 0.272114 2:-66019622 MsG0280010195.01.T01:intron
TGTGATCAAATAAGCATATA+TGG 0.320912 2:+66019360 None:intergenic
GGTATCTTGGTGCAAGTTAC+AGG 0.327096 2:+66020643 None:intergenic
CAGTTTGAACCTTGCTCTCA+TGG 0.330450 2:-66022933 MsG0280010195.01.T01:CDS
GGATCACTTGTCAGTTCATC+TGG 0.343082 2:+66023090 None:intergenic
TGCTCTCATGGTGACTTCCT+TGG 0.363969 2:-66022921 MsG0280010195.01.T01:CDS
GAACAGATTTCAATGTATAA+TGG 0.368359 2:-66019286 MsG0280010195.01.T01:three_prime_UTR
CCTTGTTACCCAGGGAGAAC+AGG 0.372665 2:-66022067 MsG0280010195.01.T01:intron
ATGTATTGCTCAAGGGAGTT+GGG 0.373857 2:-66023623 MsG0280010195.01.T01:CDS
AAGTGATCCAGATGTTATTT+CGG 0.379461 2:-66023076 MsG0280010195.01.T01:CDS
CTTGTATCAGTTAGTGGATT+GGG 0.386024 2:-66019633 MsG0280010195.01.T01:CDS
ATCACATTACATTGCTTATG+TGG 0.393777 2:-66019343 MsG0280010195.01.T01:three_prime_UTR
AGTTGGGGATATTATATTGC+AGG 0.396380 2:-66022865 MsG0280010195.01.T01:intron
CGAAGCTAGTTGACATGATC+AGG 0.398418 2:-66020415 MsG0280010195.01.T01:intron
TCATAATCAAGAGAAATTAA+TGG 0.400281 2:+66020622 None:intergenic
GAATTGTCAGGGAGAAAGTT+GGG 0.409360 2:-66022881 MsG0280010195.01.T01:CDS
AAGAGAAATTAATGGTATCT+TGG 0.414759 2:+66020630 None:intergenic
TCTTGCGTCAGCACTGGATA+AGG 0.420014 2:-66022007 MsG0280010195.01.T01:intron
GGAGATCTTGTATCAGTTAG+TGG 0.420203 2:-66019639 MsG0280010195.01.T01:CDS
GCTGCAACTACCACTAGCTT+TGG 0.424137 2:-66025758 MsG0280010195.01.T01:CDS
CTCTTTAGGCTGAACGGTGC+CGG 0.424686 2:-66023128 MsG0280010195.01.T01:intron
CTTGGCTCAATTCTTGGTAC+AGG 0.426476 2:-66022903 MsG0280010195.01.T01:CDS
GATGTATTGCTCAAGGGAGT+TGG 0.427872 2:-66023624 MsG0280010195.01.T01:CDS
AGGAGAGAAGATGAGAGGTA+AGG 0.433483 2:+66025639 None:intergenic
GAGGGGTTAGAAAATTTGTA+TGG 0.436886 2:+66023314 None:intergenic
GAAGTAAACACCACAAAGAA+AGG 0.438769 2:-66019486 MsG0280010195.01.T01:CDS
CTCAATGCCGAAATAACATC+TGG 0.441188 2:+66023069 None:intergenic
TTCTCTTCCAGGTTTGAACT+TGG 0.443257 2:+66019316 None:intergenic
AAAAGAATCTATGCAAGTAT+TGG 0.445890 2:-66023284 MsG0280010195.01.T01:CDS
CATGAGAGCAAGGTTCAAAC+TGG 0.449126 2:+66022934 None:intergenic
GTAACCTGAAGAAGTGGAAA+AGG 0.453594 2:+66025619 None:intergenic
TGGATCCCAATTACTACAAA+AGG 0.454338 2:-66019678 MsG0280010195.01.T01:CDS
ATGGCGATGTACGTATCAAC+TGG 0.457613 2:-66019698 MsG0280010195.01.T01:CDS
TTCTTGGTACAGGAATTGTC+AGG 0.461050 2:-66022893 MsG0280010195.01.T01:CDS
CTGGATGTCCAACAGAAATC+CGG 0.476765 2:+66023109 None:intergenic
AGAATTTCTTGCGTCAGCAC+TGG 0.477119 2:-66022013 MsG0280010195.01.T01:CDS
GAACGGTGCCGGATTTCTGT+TGG 0.493515 2:-66023117 MsG0280010195.01.T01:CDS
TAGAGAGTAACCTGAAGAAG+TGG 0.494138 2:+66025613 None:intergenic
TCTTGTATCAGTTAGTGGAT+TGG 0.495279 2:-66019634 MsG0280010195.01.T01:CDS
GTTGATGCAGTAGCCAGTGC+AGG 0.500484 2:-66020455 MsG0280010195.01.T01:CDS
ATTAGCGGACATTAAAGCAT+TGG 0.502673 2:-66023257 MsG0280010195.01.T01:CDS
GGAGAGAAGATGAGAGGTAA+GGG 0.518934 2:+66025640 None:intergenic
GCAAGAAATTCTACAAGCTC+TGG 0.522573 2:+66022024 None:intergenic
GGACATTTAAATAATAAAAG+AGG 0.526656 2:+66019381 None:intergenic
TGAAATCTTAAATCCTGCAC+TGG 0.527319 2:+66020442 None:intergenic
GGAATTGTCAGGGAGAAAGT+TGG 0.527589 2:-66022882 MsG0280010195.01.T01:CDS
CCACTAGCTTTGGAACTGCT+TGG 0.535075 2:-66025748 MsG0280010195.01.T01:CDS
CTCTTGATTATGAACCGCCA+AGG 0.539330 2:-66020612 MsG0280010195.01.T01:intron
GGGCCAAGATGTTACCTTGG+CGG 0.539528 2:+66020598 None:intergenic
CAGATGTTATTTCGGCATTG+AGG 0.539649 2:-66023068 MsG0280010195.01.T01:intron
GACATTAAAGCATTGGCTCA+AGG 0.555546 2:-66023250 MsG0280010195.01.T01:CDS
TGGAATACCAAGTTCAAACC+TGG 0.561544 2:-66019323 MsG0280010195.01.T01:three_prime_UTR
AGAGGTTGTTAGCATTGTTG+CGG 0.563507 2:+66025675 None:intergenic
AGAAGTTGATGTATTGCTCA+AGG 0.564298 2:-66023631 MsG0280010195.01.T01:CDS
CTTGTTACCCAGGGAGAACA+GGG 0.565414 2:-66022066 MsG0280010195.01.T01:intron
GCTAGTGGTAGTTGCAGCCA+TGG 0.567257 2:+66025763 None:intergenic
AAGATCTCCACTCTTGATTG+TGG 0.570795 2:+66019653 None:intergenic
GGAAAAGGAGAGAAGATGAG+AGG 0.603841 2:+66025634 None:intergenic
TATATGCTCTTTAGGCTGAA+CGG 0.610234 2:-66023134 MsG0280010195.01.T01:intron
TGTATTGCTCAAGGGAGTTG+GGG 0.611297 2:-66023622 MsG0280010195.01.T01:CDS
AGGAAGTCACCATGAGAGCA+AGG 0.611523 2:+66022924 None:intergenic
AAAGAAAGGAAAATTTGCAG+TGG 0.618269 2:-66019472 MsG0280010195.01.T01:CDS
GGCTCAAGGAGGTTATCCAC+AGG 0.618562 2:-66023236 MsG0280010195.01.T01:intron
TAAGGGTCCTTTGAAAAGAG+AGG 0.622157 2:+66025657 None:intergenic
GAAGTTGATGTATTGCTCAA+GGG 0.624002 2:-66023630 MsG0280010195.01.T01:CDS
AAAGGAACCACAATCAAGAG+TGG 0.627963 2:-66019660 MsG0280010195.01.T01:CDS
TCTTGGTACAGGAATTGTCA+GGG 0.628354 2:-66022892 MsG0280010195.01.T01:CDS
CCAAGCAGTTCCAAAGCTAG+TGG 0.639165 2:+66025748 None:intergenic
AATTGTCAGGGAGAAAGTTG+GGG 0.647375 2:-66022880 MsG0280010195.01.T01:CDS
CTGTACCAAGAATTGAGCCA+AGG 0.655995 2:+66022904 None:intergenic
AGTGAAGCATGTTCTTGAGA+TGG 0.664704 2:-66023580 MsG0280010195.01.T01:intron
ATTAAAGCATTGGCTCAAGG+AGG 0.676251 2:-66023247 MsG0280010195.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAAAAAAT+TGG + Chr2:66024484-66024503 None:intergenic 0.0%
!! AAAATAAAATAATTTAATCC+AGG + Chr2:66022684-66022703 None:intergenic 10.0%
!! ACTGAAAATAAATTAAATAA+TGG + Chr2:66019551-66019570 None:intergenic 10.0%
!!! CTTTTTTATAAAATAAATTG+TGG - Chr2:66019497-66019516 MsG0280010195.01.T01:intron 10.0%
!! TAGCATAAAATGATATATAA+TGG + Chr2:66021586-66021605 None:intergenic 15.0%
!! TTATCTAAATATACTATGAA+AGG + Chr2:66022021-66022040 None:intergenic 15.0%
!! TTGAAATTGTGTTTATAAAT+GGG - Chr2:66024244-66024263 MsG0280010195.01.T01:intron 15.0%
!!! ATAAAAGAACTTTTTACTAT+AGG - Chr2:66023344-66023363 MsG0280010195.01.T01:CDS 15.0%
!!! ATGTTTAATTTATTTCATTC+TGG - Chr2:66025485-66025504 MsG0280010195.01.T01:intron 15.0%
!!! TAGGAATACAATATTTTTAT+TGG - Chr2:66023587-66023606 MsG0280010195.01.T01:CDS 15.0%
!!! TGATATTTTATATACAACAA+AGG - Chr2:66022276-66022295 MsG0280010195.01.T01:intron 15.0%
!! AAAGTTATACAAAATACGAA+GGG + Chr2:66022908-66022927 None:intergenic 20.0%
!! AATTTACGTATCAAAACAAA+AGG - Chr2:66023065-66023084 MsG0280010195.01.T01:intron 20.0%
!! ACATAACATAAGTCAATATA+TGG - Chr2:66024775-66024794 MsG0280010195.01.T01:intron 20.0%
!! ACATAATATATATGCTCTTT+AGG - Chr2:66021863-66021882 MsG0280010195.01.T01:intron 20.0%
!! ACATCATATATACACAAATT+AGG + Chr2:66024625-66024644 None:intergenic 20.0%
!! AGTTTCACATTGTTTATTAT+TGG - Chr2:66020858-66020877 MsG0280010195.01.T01:intron 20.0%
!! ATCTCTATATCTTTCTTAAT+TGG + Chr2:66022793-66022812 None:intergenic 20.0%
!! CATCATATATACACAAATTA+GGG + Chr2:66024624-66024643 None:intergenic 20.0%
!! CATTAAATTTATGCTCTATT+TGG + Chr2:66025039-66025058 None:intergenic 20.0%
!! CCTACAAAAAAAAATAGAAA+TGG + Chr2:66019428-66019447 None:intergenic 20.0%
!! CTCAAAAAATGTTTATAAGT+GGG - Chr2:66022543-66022562 MsG0280010195.01.T01:intron 20.0%
!! CTTGAAATTGTGTTTATAAA+TGG - Chr2:66024243-66024262 MsG0280010195.01.T01:intron 20.0%
!! GATACGTAAATTTATTAAGA+AGG + Chr2:66023057-66023076 None:intergenic 20.0%
!! GGACATTTAAATAATAAAAG+AGG + Chr2:66025627-66025646 None:intergenic 20.0%
!! TAGACTAATGTTAGTATATT+AGG - Chr2:66023611-66023630 MsG0280010195.01.T01:CDS 20.0%
!! TATCTAAATCAAAAACCTTA+AGG + Chr2:66020933-66020952 None:intergenic 20.0%
!! TATTGATCAAATCATTGAAA+AGG - Chr2:66024037-66024056 MsG0280010195.01.T01:intron 20.0%
!! TCATAATCAAGAGAAATTAA+TGG + Chr2:66024386-66024405 None:intergenic 20.0%
!! TCTCTATATCTTTCTTAATT+GGG + Chr2:66022792-66022811 None:intergenic 20.0%
!! TGGTCAAATAAAACATATAA+TGG + Chr2:66022710-66022729 None:intergenic 20.0%
!! TTTATAATTGTGTTCCTAAA+GGG + Chr2:66023717-66023736 None:intergenic 20.0%
!!! CCATTTCTATTTTTTTTTGT+AGG - Chr2:66019425-66019444 MsG0280010195.01.T01:three_prime_UTR 20.0%
!!! TAAGGTTTTTGATTTAGATA+GGG - Chr2:66020933-66020952 MsG0280010195.01.T01:intron 20.0%
!!! TATGTTTTATTTGACCATTT+TGG - Chr2:66022713-66022732 MsG0280010195.01.T01:intron 20.0%
!!! TCTTAGCTAAATCATTATTT+TGG - Chr2:66021262-66021281 MsG0280010195.01.T01:intron 20.0%
!!! TTAAGGTTTTTGATTTAGAT+AGG - Chr2:66020932-66020951 MsG0280010195.01.T01:intron 20.0%
!!! TTGTAGTAAAGTTTTAAACT+TGG - Chr2:66019650-66019669 MsG0280010195.01.T01:CDS 20.0%
!!! TTTTAGGTAAAAGTAGTAAA+TGG + Chr2:66022182-66022201 None:intergenic 20.0%
!!! TTTTATAATTGTGTTCCTAA+AGG + Chr2:66023718-66023737 None:intergenic 20.0%
!!! TTTTGAACAATTGAACATAA+TGG + Chr2:66019470-66019489 None:intergenic 20.0%
! AAAAGAATCTATGCAAGTAT+TGG - Chr2:66021721-66021740 MsG0280010195.01.T01:intron 25.0%
! AAACATGACAAGATAGAATT+AGG - Chr2:66023568-66023587 MsG0280010195.01.T01:intron 25.0%
! AAATAAGTGCAAGAAAATCA+AGG + Chr2:66025111-66025130 None:intergenic 25.0%
! AAGAGAAATTAATGGTATCT+TGG + Chr2:66024378-66024397 None:intergenic 25.0%
! AAGCATTAAAAATGTGAAAC+TGG + Chr2:66021305-66021324 None:intergenic 25.0%
! AAGTCATATCACATATAATG+TGG + Chr2:66024226-66024245 None:intergenic 25.0%
! AAGTTATAAAACTTAAGAGC+TGG + Chr2:66024908-66024927 None:intergenic 25.0%
! AATGAAATTTGTATGGATCA+AGG + Chr2:66021470-66021489 None:intergenic 25.0%
! AATGATATATAATGGCTCAA+AGG + Chr2:66021578-66021597 None:intergenic 25.0%
! ACATTGTTTATTATTGGACA+AGG - Chr2:66020864-66020883 MsG0280010195.01.T01:intron 25.0%
! ACTTGTAAAAGCTTAAAAGA+AGG - Chr2:66025408-66025427 MsG0280010195.01.T01:intron 25.0%
! AGAAAAAAAAACTTTCCATC+AGG + Chr2:66024143-66024162 None:intergenic 25.0%
! AGTAAAGAAAGTAGATCATA+TGG - Chr2:66023973-66023992 MsG0280010195.01.T01:intron 25.0%
! AGTAAGAAAATGGTTAAGAT+GGG - Chr2:66020639-66020658 MsG0280010195.01.T01:CDS 25.0%
! ATAGTTCTTATTCACCTTTA+AGG + Chr2:66024020-66024039 None:intergenic 25.0%
! ATGAAATTTGTATGGATCAA+GGG + Chr2:66021469-66021488 None:intergenic 25.0%
! CAAAGTTATACAAAATACGA+AGG + Chr2:66022909-66022928 None:intergenic 25.0%
! CACAATTATAAAACGAAATG+CGG - Chr2:66023725-66023744 MsG0280010195.01.T01:intron 25.0%
! CCTCAAAAAATGTTTATAAG+TGG - Chr2:66022542-66022561 MsG0280010195.01.T01:intron 25.0%
! GAAAAGGATTCAGATTTAAA+TGG - Chr2:66024053-66024072 MsG0280010195.01.T01:intron 25.0%
! GAACAGATTTCAATGTATAA+TGG - Chr2:66025719-66025738 MsG0280010195.01.T01:CDS 25.0%
! GTAAAGAAAGTAGATCATAT+GGG - Chr2:66023974-66023993 MsG0280010195.01.T01:intron 25.0%
! TACTAAATTTCGTAGTTTGA+AGG - Chr2:66023245-66023264 MsG0280010195.01.T01:CDS 25.0%
! TACTCAAAACAAAAAGAAAG+TGG + Chr2:66025465-66025484 None:intergenic 25.0%
! TAGTAAGAAAATGGTTAAGA+TGG - Chr2:66020638-66020657 MsG0280010195.01.T01:CDS 25.0%
! TGATGAATATATTGCTGAAT+TGG - Chr2:66019609-66019628 MsG0280010195.01.T01:intron 25.0%
! TGATTTATCCTTTGATCATT+TGG - Chr2:66021150-66021169 MsG0280010195.01.T01:intron 25.0%
! TGTGATCAAATAAGCATATA+TGG + Chr2:66025648-66025667 None:intergenic 25.0%
! TTAAAGGAAATTATACCGTA+TGG - Chr2:66023437-66023456 MsG0280010195.01.T01:intron 25.0%
! TTATAATTGTGTTCCTAAAG+GGG + Chr2:66023716-66023735 None:intergenic 25.0%
! TTATATGGAATGAGAATCAA+TGG - Chr2:66020416-66020435 MsG0280010195.01.T01:CDS 25.0%
! TTCAAACTTAAGTTTCTACT+TGG + Chr2:66020140-66020159 None:intergenic 25.0%
! TTCAATTGTTAAAGCCTTAA+AGG - Chr2:66024003-66024022 MsG0280010195.01.T01:intron 25.0%
!! AGTCTAGAATGAAATTTGTA+TGG + Chr2:66021477-66021496 None:intergenic 25.0%
!! ATCCTTTAACTTAAGTGATT+TGG - Chr2:66023920-66023939 MsG0280010195.01.T01:intron 25.0%
!! CTCTTTTGCATGAAATATTT+TGG - Chr2:66025236-66025255 MsG0280010195.01.T01:intron 25.0%
!! GAAACGTTATTCAAGTTTAA+AGG - Chr2:66023421-66023440 MsG0280010195.01.T01:intron 25.0%
!! TCCTTTAACTTAAGTGATTT+GGG - Chr2:66023921-66023940 MsG0280010195.01.T01:intron 25.0%
!! TTCACTTTCCTAAAGTATTA+TGG - Chr2:66020277-66020296 MsG0280010195.01.T01:intron 25.0%
!! TTTTACTATAGGATCTTAGT+AGG - Chr2:66023355-66023374 MsG0280010195.01.T01:intron 25.0%
!!! AAGCACTTCATTTTGATTTT+AGG + Chr2:66020069-66020088 None:intergenic 25.0%
!!! AGCACTTCATTTTGATTTTA+GGG + Chr2:66020068-66020087 None:intergenic 25.0%
!!! CCACTTATAAACATTTTTTG+AGG + Chr2:66022545-66022564 None:intergenic 25.0%
!!! GCAGGAATTTTTTAAAATCT+CGG - Chr2:66023161-66023180 MsG0280010195.01.T01:intron 25.0%
!!! TTGAATTCTTGATTTGCTTA+TGG - Chr2:66024658-66024677 MsG0280010195.01.T01:intron 25.0%
!!! TTTTGATTTTAGGGTTTGTT+TGG + Chr2:66020059-66020078 None:intergenic 25.0%
!!! TTTTGTAGGTTGATTCTATT+TGG - Chr2:66019439-66019458 MsG0280010195.01.T01:exon 25.0%
!!! TTTTTTTCTTTTTCTGTGTG+CGG - Chr2:66024154-66024173 MsG0280010195.01.T01:intron 25.0%
AAAGAAAGGAAAATTTGCAG+TGG - Chr2:66025533-66025552 MsG0280010195.01.T01:intron 30.0%
AAAGAAATCATGATTGTGAG+CGG - Chr2:66020462-66020481 MsG0280010195.01.T01:CDS 30.0%
AACTTAAGTTTCTACTTGGA+TGG + Chr2:66020136-66020155 None:intergenic 30.0%
ACAACGAAACTAATACCTTA+AGG - Chr2:66020915-66020934 MsG0280010195.01.T01:intron 30.0%
ACTTTACTGTATCAAGGTAA+TGG + Chr2:66021819-66021838 None:intergenic 30.0%
AGATATAGAGATTAATGAGC+TGG - Chr2:66022801-66022820 MsG0280010195.01.T01:intron 30.0%
AGCATCAACAATTTCTGTAT+TGG + Chr2:66021990-66022009 None:intergenic 30.0%
AGTAGACACCATAATACTTT+AGG + Chr2:66020288-66020307 None:intergenic 30.0%
AGTGATGAGTAGTAAGAAAA+TGG - Chr2:66020629-66020648 MsG0280010195.01.T01:CDS 30.0%
ATAATAACTCTTGACGATAC+AGG + Chr2:66021016-66021035 None:intergenic 30.0%
ATAGACATCAAACAATGACA+CGG + Chr2:66020338-66020357 None:intergenic 30.0%
ATATTCATCATCACCATGTT+GGG + Chr2:66019599-66019618 None:intergenic 30.0%
ATCAAAATTGCTCAGTAGTT+GGG + Chr2:66021131-66021150 None:intergenic 30.0%
ATCACATTACATTGCTTATG+TGG - Chr2:66025662-66025681 MsG0280010195.01.T01:CDS 30.0%
ATGTAATGAAGAACTTACCA+AGG + Chr2:66020982-66021001 None:intergenic 30.0%
CAAAGTTAAATCATTGTGAC+TGG - Chr2:66022491-66022510 MsG0280010195.01.T01:intron 30.0%
CATAAGTCAATATATGGATG+AGG - Chr2:66024781-66024800 MsG0280010195.01.T01:intron 30.0%
CATATGCCAAAATAACCAAA+GGG + Chr2:66025181-66025200 None:intergenic 30.0%
CATGTAGAAAAAAAAGTTCC+AGG + Chr2:66021508-66021527 None:intergenic 30.0%
CTACAATTTATGAAACCCTT+TGG + Chr2:66019636-66019655 None:intergenic 30.0%
CTTAAGATTTGAATTGAGTG+TGG + Chr2:66024291-66024310 None:intergenic 30.0%
GAATGAATGTAATCACAAGT+CGG + Chr2:66020260-66020279 None:intergenic 30.0%
GCATCAACAATTTCTGTATT+GGG + Chr2:66021989-66022008 None:intergenic 30.0%
GGTCATGAACATATCATAAA+CGG - Chr2:66019966-66019985 MsG0280010195.01.T01:intron 30.0%
GTATCGTCAAGAGTTATTAT+TGG - Chr2:66021016-66021035 MsG0280010195.01.T01:intron 30.0%
TATAAGCTGAAAACAGCTTA+TGG + Chr2:66024855-66024874 None:intergenic 30.0%
TATAATTGTGTTCCTAAAGG+GGG + Chr2:66023715-66023734 None:intergenic 30.0%
TATATTCATCATCACCATGT+TGG + Chr2:66019600-66019619 None:intergenic 30.0%
TATCACACTTTAAGTACCTT+GGG - Chr2:66023298-66023317 MsG0280010195.01.T01:CDS 30.0%
TCAACATTTGATGTATGGTT+CGG - Chr2:66021552-66021571 MsG0280010195.01.T01:intron 30.0%
TCAGTAGTAATGTTTATGAC+TGG - Chr2:66021070-66021089 MsG0280010195.01.T01:intron 30.0%
TCATATGCCAAAATAACCAA+AGG + Chr2:66025182-66025201 None:intergenic 30.0%
TCATTGTTTGATGTCTATGT+TGG - Chr2:66020340-66020359 MsG0280010195.01.T01:intron 30.0%
TCCCAAATCACTTAAGTTAA+AGG + Chr2:66023925-66023944 None:intergenic 30.0%
TGTAATGAAGAACTTACCAA+GGG + Chr2:66020981-66021000 None:intergenic 30.0%
TGTGTTATATTACAGTCAGT+GGG + Chr2:66020169-66020188 None:intergenic 30.0%
TTGTGTATATATGATGTCTG+TGG - Chr2:66024628-66024647 MsG0280010195.01.T01:intron 30.0%
TTGTGTTATATTACAGTCAG+TGG + Chr2:66020170-66020189 None:intergenic 30.0%
TTTATGTCAACTTCAAACCA+GGG + Chr2:66024430-66024449 None:intergenic 30.0%
! AAGTGATCCAGATGTTATTT+CGG - Chr2:66021929-66021948 MsG0280010195.01.T01:intron 30.0%
! ACATGTTCTATCATCTTTTC+TGG + Chr2:66023762-66023781 None:intergenic 30.0%
! ATTACTCTTTTCAGCATTAC+AGG - Chr2:66022042-66022061 MsG0280010195.01.T01:CDS 30.0%
! ATTCAGAAAACAAGTTCTGA+AGG + Chr2:66024699-66024718 None:intergenic 30.0%
! GGATCTTTTACTATATACAC+AGG + Chr2:66022364-66022383 None:intergenic 30.0%
! TGCAAATTTTCCTTTCTTTG+TGG + Chr2:66025532-66025551 None:intergenic 30.0%
! TGGTTCCTTTTGTAGTAATT+GGG + Chr2:66025335-66025354 None:intergenic 30.0%
! TTAAGTGATTTGGGAAAATG+TGG - Chr2:66023930-66023949 MsG0280010195.01.T01:intron 30.0%
! TTACTCTTTTCAGCATTACA+GGG - Chr2:66022043-66022062 MsG0280010195.01.T01:CDS 30.0%
! TTGAAAGTATGTCTGATAGT+TGG - Chr2:66020597-66020616 MsG0280010195.01.T01:intron 30.0%
! TTGTTACCCTTTGGTTATTT+TGG - Chr2:66025172-66025191 MsG0280010195.01.T01:intron 30.0%
! TTTTATGTCAACTTCAAACC+AGG + Chr2:66024431-66024450 None:intergenic 30.0%
! TTTTCTTACTACTCATCACT+TGG + Chr2:66020629-66020648 None:intergenic 30.0%
!! ATATACTATGAAAGGCATCT+AGG + Chr2:66022013-66022032 None:intergenic 30.0%
!! GCAAGTATTGGAAAAATTAG+CGG - Chr2:66021733-66021752 MsG0280010195.01.T01:intron 30.0%
!!! CTGGAACTTTTTTTTCTACA+TGG - Chr2:66021506-66021525 MsG0280010195.01.T01:intron 30.0%
AACAATTTCTGTATTGGGCT+TGG + Chr2:66021984-66022003 None:intergenic 35.0%
AAGAAAGTAGATCATATGGG+AGG - Chr2:66023977-66023996 MsG0280010195.01.T01:intron 35.0%
ACAGGTAACCATCTAGATAT+AGG - Chr2:66021787-66021806 MsG0280010195.01.T01:intron 35.0%
ACATATTGTGCTCATAGCAA+TGG - Chr2:66025288-66025307 MsG0280010195.01.T01:intron 35.0%
ACATCATTTGATCCCTAACT+TGG - Chr2:66021610-66021629 MsG0280010195.01.T01:intron 35.0%
ACATGTGAAGCAATAGTGAA+GGG - Chr2:66019707-66019726 MsG0280010195.01.T01:intron 35.0%
ACTATAGGATCTTAGTAGGA+TGG - Chr2:66023359-66023378 MsG0280010195.01.T01:intron 35.0%
AGAACATGTCTTAGATAGTC+TGG - Chr2:66023773-66023792 MsG0280010195.01.T01:intron 35.0%
AGAAGGTAGTCTGTAAAATG+AGG + Chr2:66023040-66023059 None:intergenic 35.0%
AGATATGCACAACTTTAGAC+AGG + Chr2:66022386-66022405 None:intergenic 35.0%
AGCATAGAATTGTTACCCTT+TGG - Chr2:66025163-66025182 MsG0280010195.01.T01:intron 35.0%
AGGAAATGATTGTGTAATCG+TGG - Chr2:66023085-66023104 MsG0280010195.01.T01:CDS 35.0%
AGTTGGGGATATTATATTGC+AGG - Chr2:66022140-66022159 MsG0280010195.01.T01:intron 35.0%
ATACAGCATTGCAAGTCTTA+TGG + Chr2:66023463-66023482 None:intergenic 35.0%
ATATAGCAAACTTCACCTGA+TGG - Chr2:66024125-66024144 MsG0280010195.01.T01:intron 35.0%
ATATTGCTGAATTGGACCAA+AGG - Chr2:66019617-66019636 MsG0280010195.01.T01:intron 35.0%
ATGAGGGAATACATGACATT+GGG - Chr2:66020368-66020387 MsG0280010195.01.T01:intron 35.0%
ATGGATGAGGCTATTTGAAT+TGG - Chr2:66024794-66024813 MsG0280010195.01.T01:intron 35.0%
ATGTCATGTATTCCCTCATA+TGG + Chr2:66020367-66020386 None:intergenic 35.0%
ATTTGGAAAGACAGCCAAAA+TGG + Chr2:66022730-66022749 None:intergenic 35.0%
CAGTGTCAACATTTGATGTA+TGG - Chr2:66021547-66021566 MsG0280010195.01.T01:intron 35.0%
CATACATCAAATGTTGACAC+TGG + Chr2:66021549-66021568 None:intergenic 35.0%
CATCAAAATTGCTCAGTAGT+TGG + Chr2:66021132-66021151 None:intergenic 35.0%
CGCATTCTTCTTATTCATTC+AGG - Chr2:66024328-66024347 MsG0280010195.01.T01:intron 35.0%
CGTAGTTTGAAGGTGAAAAT+TGG - Chr2:66023255-66023274 MsG0280010195.01.T01:CDS 35.0%
CTATGTATCTACCAACATGT+TGG + Chr2:66020685-66020704 None:intergenic 35.0%
CTTATATTCATAAGCTCTCC+AGG - Chr2:66024869-66024888 MsG0280010195.01.T01:intron 35.0%
GAAGTAAACACCACAAAGAA+AGG - Chr2:66025519-66025538 MsG0280010195.01.T01:intron 35.0%
GAATTCATTAGAGAAAGACG+TGG - Chr2:66023869-66023888 MsG0280010195.01.T01:intron 35.0%
GAGGGGTTAGAAAATTTGTA+TGG + Chr2:66021694-66021713 None:intergenic 35.0%
GAGTTAAATGACCAAAACCT+TGG + Chr2:66023656-66023675 None:intergenic 35.0%
GATATGCACAACTTTAGACA+GGG + Chr2:66022385-66022404 None:intergenic 35.0%
GCAAACACTTTACTGTATCA+AGG + Chr2:66021825-66021844 None:intergenic 35.0%
GCAAACTAAATGGTGAAAAG+AGG - Chr2:66020554-66020573 MsG0280010195.01.T01:intron 35.0%
GGCTGTTTAATCAACAACTA+TGG - Chr2:66022329-66022348 MsG0280010195.01.T01:intron 35.0%
GTATCACACTTTAAGTACCT+TGG - Chr2:66023297-66023316 MsG0280010195.01.T01:CDS 35.0%
GTCTTCACAAGGAATATCTA+TGG - Chr2:66022308-66022327 MsG0280010195.01.T01:intron 35.0%
GTGAAAAGAGGTAACATGTA+TGG - Chr2:66020566-66020585 MsG0280010195.01.T01:intron 35.0%
GTTGTCCTTTCCATTCTATA+CGG + Chr2:66020900-66020919 None:intergenic 35.0%
TAAGTGCAAGAAAATCAAGG+AGG + Chr2:66025108-66025127 None:intergenic 35.0%
TACATGTGAAGCAATAGTGA+AGG - Chr2:66019706-66019725 MsG0280010195.01.T01:intron 35.0%
TAGCCTCAACTTAAAGTTTC+TGG - Chr2:66022652-66022671 MsG0280010195.01.T01:intron 35.0%
TATATCTAGATGGTTACCTG+TGG + Chr2:66021788-66021807 None:intergenic 35.0%
TATATCTTCTCCATCAACCA+CGG + Chr2:66021197-66021216 None:intergenic 35.0%
TATATGCTCTTTAGGCTGAA+CGG - Chr2:66021871-66021890 MsG0280010195.01.T01:intron 35.0%
TATGAGGGAATACATGACAT+TGG - Chr2:66020367-66020386 MsG0280010195.01.T01:intron 35.0%
TATTGCTGAATTGGACCAAA+GGG - Chr2:66019618-66019637 MsG0280010195.01.T01:intron 35.0%
TATTTCATTCTGGTCCAGAT+AGG - Chr2:66025495-66025514 MsG0280010195.01.T01:intron 35.0%
TCTTAGTAGGATGGATAAAC+TGG - Chr2:66023368-66023387 MsG0280010195.01.T01:intron 35.0%
TGAAATCTTAAATCCTGCAC+TGG + Chr2:66024566-66024585 None:intergenic 35.0%
TGGATCCCAATTACTACAAA+AGG - Chr2:66025327-66025346 MsG0280010195.01.T01:intron 35.0%
TGGGTCTGTCATAAAAAGTA+CGG - Chr2:66023317-66023336 MsG0280010195.01.T01:CDS 35.0%
TTATATTACAGTCAGTGGGA+TGG + Chr2:66020165-66020184 None:intergenic 35.0%
TTATGATGTGTCAGTGAAAG+TGG - Chr2:66023818-66023837 MsG0280010195.01.T01:intron 35.0%
TTTCACTTAGCTATCTGAGA+AGG - Chr2:66019920-66019939 MsG0280010195.01.T01:intron 35.0%
! ATTAGCGGACATTAAAGCAT+TGG - Chr2:66021748-66021767 MsG0280010195.01.T01:intron 35.0%
! CTAACAACCTCTCTTTTCAA+AGG - Chr2:66019341-66019360 MsG0280010195.01.T01:three_prime_UTR 35.0%
! CTTCAGACTGAAAGTGTATT+TGG - Chr2:66020214-66020233 MsG0280010195.01.T01:intron 35.0%
! GTGGTTCCTTTTGTAGTAAT+TGG + Chr2:66025336-66025355 None:intergenic 35.0%
! TAGCTATCTGAGAAGGTATA+TGG - Chr2:66019927-66019946 MsG0280010195.01.T01:intron 35.0%
! TCTTGTATCAGTTAGTGGAT+TGG - Chr2:66025371-66025390 MsG0280010195.01.T01:intron 35.0%
! TGCATAGATTCTTTTAGCAC+TGG + Chr2:66021716-66021735 None:intergenic 35.0%
! TGTATTGGGCTTGGAAATTT+TGG + Chr2:66021975-66021994 None:intergenic 35.0%
! TGTGTATTTTTCCTTCACCA+AGG - Chr2:66023636-66023655 MsG0280010195.01.T01:CDS 35.0%
! TTTTTCCTTCACCAAGGTTT+TGG - Chr2:66023642-66023661 MsG0280010195.01.T01:CDS 35.0%
!! AGAAGTTGATGTATTGCTCA+AGG - Chr2:66021374-66021393 MsG0280010195.01.T01:intron 35.0%
!! ATAGATTCTTTTAGCACTGG+AGG + Chr2:66021713-66021732 None:intergenic 35.0%
!! CTTGTATCAGTTAGTGGATT+GGG - Chr2:66025372-66025391 MsG0280010195.01.T01:intron 35.0%
!! GAAGTTGATGTATTGCTCAA+GGG - Chr2:66021375-66021394 MsG0280010195.01.T01:intron 35.0%
!! GTTGGTAGATACATAGCTTT+TGG - Chr2:66020689-66020708 MsG0280010195.01.T01:intron 35.0%
!! TACTTTTTATGACAGACCCA+AGG + Chr2:66023317-66023336 None:intergenic 35.0%
!! TAGATTCTTTTAGCACTGGA+GGG + Chr2:66021712-66021731 None:intergenic 35.0%
!! TAGTGGATTGGGAAGATTAA+AGG - Chr2:66025383-66025402 MsG0280010195.01.T01:intron 35.0%
!! TGTCCAGAAACTTTAAGTTG+AGG + Chr2:66022658-66022677 None:intergenic 35.0%
!! TTAAGTTGAGGCTAAACCAA+TGG + Chr2:66022646-66022665 None:intergenic 35.0%
!!! AGCTTTTGGAATAGTATGCT+TGG - Chr2:66020703-66020722 MsG0280010195.01.T01:intron 35.0%
!!! GGTTTTGTTGGGTTAAGTTA+GGG - Chr2:66022589-66022608 MsG0280010195.01.T01:intron 35.0%
!!! TGGTTTTGTTGGGTTAAGTT+AGG - Chr2:66022588-66022607 MsG0280010195.01.T01:intron 35.0%
AAAACCAGCTTGTAAGGTGA+GGG + Chr2:66022575-66022594 None:intergenic 40.0%
AAAGAAAACCCTGTGTCATG+AGG - Chr2:66023517-66023536 MsG0280010195.01.T01:intron 40.0%
AAAGGAACCACAATCAAGAG+TGG - Chr2:66025345-66025364 MsG0280010195.01.T01:intron 40.0%
AAATGGACGACAACCAAGTT+AGG + Chr2:66021626-66021645 None:intergenic 40.0%
AACGTCGACCAAATGATCAA+AGG + Chr2:66021161-66021180 None:intergenic 40.0%
AAGATCTCCACTCTTGATTG+TGG + Chr2:66025355-66025374 None:intergenic 40.0%
AATACATGACATTGGGGTTG+GGG - Chr2:66020375-66020394 MsG0280010195.01.T01:intron 40.0%
AATGACCAAAACCTTGGTGA+AGG + Chr2:66023650-66023669 None:intergenic 40.0%
AATGGACGACAACCAAGTTA+GGG + Chr2:66021625-66021644 None:intergenic 40.0%
AATGTCGTCTCCAAATTTCG+AGG - Chr2:66023136-66023155 MsG0280010195.01.T01:intron 40.0%
AATTGTCAGGGAGAAAGTTG+GGG - Chr2:66022125-66022144 MsG0280010195.01.T01:intron 40.0%
ACATTAGAGCTAAGGGTTGA+AGG + Chr2:66023678-66023697 None:intergenic 40.0%
ACTCGTCTGTTAGTGTTATG+TGG - Chr2:66020822-66020841 MsG0280010195.01.T01:intron 40.0%
ACTTTGTTACCTTGTTACCC+AGG - Chr2:66022929-66022948 MsG0280010195.01.T01:CDS 40.0%
AGACTGTTAAGATGGATGAG+TGG - Chr2:66023543-66023562 MsG0280010195.01.T01:intron 40.0%
AGAGGTTGTTAGCATTGTTG+CGG + Chr2:66019333-66019352 None:intergenic 40.0%
AGCTCAACACATTAGAGCTA+AGG + Chr2:66023686-66023705 None:intergenic 40.0%
AGTATGTCTGATAGTTGGCT+TGG - Chr2:66020602-66020621 MsG0280010195.01.T01:intron 40.0%
AGTGAAGCATGTTCTTGAGA+TGG - Chr2:66021425-66021444 MsG0280010195.01.T01:intron 40.0%
ATCAAACAATGACACGGACA+CGG + Chr2:66020332-66020351 None:intergenic 40.0%
ATCAACAACTATGGCTGTCT+TGG - Chr2:66022338-66022357 MsG0280010195.01.T01:intron 40.0%
ATGATGAGTCGTAACATGTG+TGG - Chr2:66020524-66020543 MsG0280010195.01.T01:intron 40.0%
ATGTATTGCTCAAGGGAGTT+GGG - Chr2:66021382-66021401 MsG0280010195.01.T01:intron 40.0%
ATGTCGTCTCCAAATTTCGA+GGG - Chr2:66023137-66023156 MsG0280010195.01.T01:intron 40.0%
CAACTATGTTGACGATCCAT+TGG - Chr2:66022627-66022646 MsG0280010195.01.T01:intron 40.0%
CAAGCATCATTTCACTATGC+AGG + Chr2:66024740-66024759 None:intergenic 40.0%
CAGACATACTTTCAAGAGAC+TGG + Chr2:66020592-66020611 None:intergenic 40.0%
CATGTGAAGCAATAGTGAAG+GGG - Chr2:66019708-66019727 MsG0280010195.01.T01:intron 40.0%
CTCAATGCCGAAATAACATC+TGG + Chr2:66021939-66021958 None:intergenic 40.0%
CTCGTCTGTTAGTGTTATGT+GGG - Chr2:66020823-66020842 MsG0280010195.01.T01:intron 40.0%
CTGCATAGTGAAATGATGCT+TGG - Chr2:66024738-66024757 MsG0280010195.01.T01:intron 40.0%
CTTGTGAGACTATTTGACAC+AGG + Chr2:66020001-66020020 None:intergenic 40.0%
CTTTGTTACCTTGTTACCCA+GGG - Chr2:66022930-66022949 MsG0280010195.01.T01:CDS 40.0%
GAAACTTTACCCACACACTA+AGG - Chr2:66019788-66019807 MsG0280010195.01.T01:intron 40.0%
GAAGACCGTATAGAATGGAA+AGG - Chr2:66020892-66020911 MsG0280010195.01.T01:intron 40.0%
GAATACATGACATTGGGGTT+GGG - Chr2:66020374-66020393 MsG0280010195.01.T01:intron 40.0%
GAATTGTCAGGGAGAAAGTT+GGG - Chr2:66022124-66022143 MsG0280010195.01.T01:intron 40.0%
GCAAGAAATTCTACAAGCTC+TGG + Chr2:66022984-66023003 None:intergenic 40.0%
GCTCAACACATTAGAGCTAA+GGG + Chr2:66023685-66023704 None:intergenic 40.0%
GGAGATCTTGTATCAGTTAG+TGG - Chr2:66025366-66025385 MsG0280010195.01.T01:intron 40.0%
GGATCAGAAAAGTCTTCACA+AGG - Chr2:66022297-66022316 MsG0280010195.01.T01:intron 40.0%
GGTTAAGATGGGTCTTGATT+TGG - Chr2:66020650-66020669 MsG0280010195.01.T01:CDS 40.0%
GTAACCTGAAGAAGTGGAAA+AGG + Chr2:66019389-66019408 None:intergenic 40.0%
GTCTATGTTGGTCCATATGA+GGG - Chr2:66020352-66020371 MsG0280010195.01.T01:intron 40.0%
GTGTTAAAGACTTACACTCG+AGG - Chr2:66020784-66020803 MsG0280010195.01.T01:intron 40.0%
TAGAGAGTAACCTGAAGAAG+TGG + Chr2:66019395-66019414 None:intergenic 40.0%
TAGCCTACAACGAAGTCAAA+TGG + Chr2:66021643-66021662 None:intergenic 40.0%
TAGTAGGATGGATAAACTGG+AGG - Chr2:66023371-66023390 MsG0280010195.01.T01:intron 40.0%
TATGGAGATAAGCTGAAAGC+AGG - Chr2:66019945-66019964 MsG0280010195.01.T01:intron 40.0%
TCTTGGTACAGGAATTGTCA+GGG - Chr2:66022113-66022132 MsG0280010195.01.T01:intron 40.0%
TGAACGAAGACCGTATAGAA+TGG - Chr2:66020887-66020906 MsG0280010195.01.T01:intron 40.0%
TGAGGATGAGACTGTTAAGA+TGG - Chr2:66023535-66023554 MsG0280010195.01.T01:intron 40.0%
TGAGGGAATACATGACATTG+GGG - Chr2:66020369-66020388 MsG0280010195.01.T01:intron 40.0%
TGCTTATGGTTGTAGTACAC+TGG - Chr2:66024672-66024691 MsG0280010195.01.T01:intron 40.0%
TGGAATACCAAGTTCAAACC+TGG - Chr2:66025682-66025701 MsG0280010195.01.T01:CDS 40.0%
TGGAGATGTGGCAAACTAAA+TGG - Chr2:66020544-66020563 MsG0280010195.01.T01:intron 40.0%
TGGTGTTTACTTCTCCTATC+TGG + Chr2:66025512-66025531 None:intergenic 40.0%
TGTATTTCTCCAACCCAACA+TGG - Chr2:66019583-66019602 MsG0280010195.01.T01:intron 40.0%
TGTCTATGTTGGTCCATATG+AGG - Chr2:66020351-66020370 MsG0280010195.01.T01:intron 40.0%
TTCATTAGAGAAAGACGTGG+TGG - Chr2:66023872-66023891 MsG0280010195.01.T01:intron 40.0%
TTCTACTTGGATGGAAACAC+AGG + Chr2:66020127-66020146 None:intergenic 40.0%
TTCTCTTCCAGGTTTGAACT+TGG + Chr2:66025692-66025711 None:intergenic 40.0%
TTCTTGGTACAGGAATTGTC+AGG - Chr2:66022112-66022131 MsG0280010195.01.T01:intron 40.0%
! AGCAATAGTGAAGGGGATTT+TGG - Chr2:66019715-66019734 MsG0280010195.01.T01:intron 40.0%
! CACTATGCAGGAACAGATTT+TGG + Chr2:66024728-66024747 None:intergenic 40.0%
! CATGTTTTCACGGGCTTATA+TGG - Chr2:66020401-66020420 MsG0280010195.01.T01:intron 40.0%
! GGGTCTGTCATAAAAAGTAC+GGG - Chr2:66023318-66023337 MsG0280010195.01.T01:CDS 40.0%
! TAAAGTTTCTGGACATGACC+TGG - Chr2:66022663-66022682 MsG0280010195.01.T01:intron 40.0%
! TAAGGGTCCTTTGAAAAGAG+AGG + Chr2:66019351-66019370 None:intergenic 40.0%
! TTGCAAGTCTTATGGCCATA+CGG + Chr2:66023455-66023474 None:intergenic 40.0%
!! AGAGTTATTATTGGTGCCAG+TGG - Chr2:66021025-66021044 MsG0280010195.01.T01:intron 40.0%
!! AGATTCTTTTAGCACTGGAG+GGG + Chr2:66021711-66021730 None:intergenic 40.0%
!! ATTAAAGCATTGGCTCAAGG+AGG - Chr2:66021758-66021777 MsG0280010195.01.T01:intron 40.0%
!! CAGATGTTATTTCGGCATTG+AGG - Chr2:66021937-66021956 MsG0280010195.01.T01:intron 40.0%
!! GACATTAAAGCATTGGCTCA+AGG - Chr2:66021755-66021774 MsG0280010195.01.T01:intron 40.0%
!!! ACCTTACAAGCTGGTTTTGT+TGG - Chr2:66022577-66022596 MsG0280010195.01.T01:intron 40.0%
!!! CCTTACAAGCTGGTTTTGTT+GGG - Chr2:66022578-66022597 MsG0280010195.01.T01:intron 40.0%
!!! GCAGGAACAGATTTTGGAAT+AGG + Chr2:66024722-66024741 None:intergenic 40.0%
AAACCAGCTTGTAAGGTGAG+GGG + Chr2:66022574-66022593 None:intergenic 45.0%
AAATTGCTCAGTAGTTGGGC+AGG + Chr2:66021127-66021146 None:intergenic 45.0%
AATGCTCAACTGCCACTCAA+CGG + Chr2:66020734-66020753 None:intergenic 45.0%
AATTGCTCAGTAGTTGGGCA+GGG + Chr2:66021126-66021145 None:intergenic 45.0%
ACACTCGAGGATGAGATTGT+TGG - Chr2:66020797-66020816 MsG0280010195.01.T01:intron 45.0%
ACTGTGCTCTGTGCACAAAA+TGG - Chr2:66022201-66022220 MsG0280010195.01.T01:intron 45.0%
AGAATTTCTTGCGTCAGCAC+TGG - Chr2:66022992-66023011 MsG0280010195.01.T01:intron 45.0%
AGGAGAGAAGATGAGAGGTA+AGG + Chr2:66019369-66019388 None:intergenic 45.0%
AGTCTCATCCTCATGACACA+GGG + Chr2:66023528-66023547 None:intergenic 45.0%
ATGGCGATGTACGTATCAAC+TGG - Chr2:66025307-66025326 MsG0280010195.01.T01:intron 45.0%
ATTCCTGCACCCTCGAAATT+TGG + Chr2:66023149-66023168 None:intergenic 45.0%
ATTCTAGACTGTCACAAGCC+TGG - Chr2:66021487-66021506 MsG0280010195.01.T01:intron 45.0%
ATTGTGTTCCTAAAGGGGGT+TGG + Chr2:66023711-66023730 None:intergenic 45.0%
CAAAACCAGCTTGTAAGGTG+AGG + Chr2:66022576-66022595 None:intergenic 45.0%
CAAACAGAGCCTTAGTGTGT+GGG + Chr2:66019800-66019819 None:intergenic 45.0%
CAAAGCCGTTCAGATGAACT+TGG + Chr2:66025434-66025453 None:intergenic 45.0%
CAAGAAAATCAAGGAGGAGC+AGG + Chr2:66025102-66025121 None:intergenic 45.0%
CAAGTTCATCTGAACGGCTT+TGG - Chr2:66025432-66025451 MsG0280010195.01.T01:intron 45.0%
CAGTTTGAACCTTGCTCTCA+TGG - Chr2:66022072-66022091 MsG0280010195.01.T01:intron 45.0%
CATGAGAGCAAGGTTCAAAC+TGG + Chr2:66022074-66022093 None:intergenic 45.0%
CCCAACAAAACCAGCTTGTA+AGG + Chr2:66022581-66022600 None:intergenic 45.0%
CGAAGCTAGTTGACATGATC+AGG - Chr2:66024590-66024609 MsG0280010195.01.T01:intron 45.0%
CTCTTGATTATGAACCGCCA+AGG - Chr2:66024393-66024412 MsG0280010195.01.T01:intron 45.0%
CTGGATGTCCAACAGAAATC+CGG + Chr2:66021899-66021918 None:intergenic 45.0%
CTGTACCAAGAATTGAGCCA+AGG + Chr2:66022104-66022123 None:intergenic 45.0%
CTTGGCTCAATTCTTGGTAC+AGG - Chr2:66022102-66022121 MsG0280010195.01.T01:intron 45.0%
GAAATCATGATTGTGAGCGG+TGG - Chr2:66020465-66020484 MsG0280010195.01.T01:CDS 45.0%
GAAGGCCAAGTTCATCTGAA+CGG - Chr2:66025426-66025445 MsG0280010195.01.T01:intron 45.0%
GACTTCCTTGGCTCAATTCT+TGG - Chr2:66022096-66022115 MsG0280010195.01.T01:intron 45.0%
GATGTATTGCTCAAGGGAGT+TGG - Chr2:66021381-66021400 MsG0280010195.01.T01:intron 45.0%
GATTTAGATAGGGTGCAGAG+TGG - Chr2:66020943-66020962 MsG0280010195.01.T01:intron 45.0%
GCTGTATGCAGCTGAATGTT+GGG - Chr2:66023476-66023495 MsG0280010195.01.T01:intron 45.0%
GGAAAAGGAGAGAAGATGAG+AGG + Chr2:66019374-66019393 None:intergenic 45.0%
GGAATACATGACATTGGGGT+TGG - Chr2:66020373-66020392 MsG0280010195.01.T01:intron 45.0%
GGAATTGTCAGGGAGAAAGT+TGG - Chr2:66022123-66022142 MsG0280010195.01.T01:intron 45.0%
GGAGAGAAGATGAGAGGTAA+GGG + Chr2:66019368-66019387 None:intergenic 45.0%
GGATCACTTGTCAGTTCATC+TGG + Chr2:66021918-66021937 None:intergenic 45.0%
GGTGAAGAATGCCAACATGT+TGG - Chr2:66020671-66020690 MsG0280010195.01.T01:intron 45.0%
GTTCTTTGCTCTTCTCTTCC+AGG + Chr2:66025703-66025722 None:intergenic 45.0%
TCATCATCACCATGTTGGGT+TGG + Chr2:66019595-66019614 None:intergenic 45.0%
TCGTAACATGTGTGGAGATG+TGG - Chr2:66020532-66020551 MsG0280010195.01.T01:intron 45.0%
TGCTGCACATACATAACCAC+TGG + Chr2:66021044-66021063 None:intergenic 45.0%
TGCTGTATGCAGCTGAATGT+TGG - Chr2:66023475-66023494 MsG0280010195.01.T01:intron 45.0%
TGTATTGCTCAAGGGAGTTG+GGG - Chr2:66021383-66021402 MsG0280010195.01.T01:intron 45.0%
TGTTATGTGGGCGTGAATGA+AGG - Chr2:66020835-66020854 MsG0280010195.01.T01:intron 45.0%
TTGGATGGAAACACAGGTCA+TGG + Chr2:66020121-66020140 None:intergenic 45.0%
! CGTCCATTTGACTTCGTTGT+AGG - Chr2:66021637-66021656 MsG0280010195.01.T01:intron 45.0%
! CTCTCCTTTTCCACTTCTTC+AGG - Chr2:66019382-66019401 MsG0280010195.01.T01:three_prime_UTR 45.0%
! GAGTGTGGCTTGTAAAGTGA+GGG + Chr2:66024276-66024295 None:intergenic 45.0%
! GGTATCTTGGTGCAAGTTAC+AGG + Chr2:66024365-66024384 None:intergenic 45.0%
! GTGGATTAATGTGGTACCCT+TGG - Chr2:66020962-66020981 MsG0280010195.01.T01:intron 45.0%
! GTTGGGGAGACATGTTTTCA+CGG - Chr2:66020391-66020410 MsG0280010195.01.T01:intron 45.0%
! TCGGGAAAGGTTTTTGTACG+AGG - Chr2:66020760-66020779 MsG0280010195.01.T01:intron 45.0%
! TGAGTGTGGCTTGTAAAGTG+AGG + Chr2:66024277-66024296 None:intergenic 45.0%
! TGTGCACAGAGCACAGTTTT+AGG + Chr2:66022198-66022217 None:intergenic 45.0%
! TTGGGGAGACATGTTTTCAC+GGG - Chr2:66020392-66020411 MsG0280010195.01.T01:intron 45.0%
!! ATTTGGTGTCCGACTTGAGT+TGG - Chr2:66020231-66020250 MsG0280010195.01.T01:intron 45.0%
!! CAGTTGAGCATTGAATGCTC+GGG - Chr2:66020742-66020761 MsG0280010195.01.T01:intron 45.0%
!! GAAGGGGATTTTGGTACTGA+AGG - Chr2:66019724-66019743 MsG0280010195.01.T01:intron 45.0%
!! GCAGTTGAGCATTGAATGCT+CGG - Chr2:66020741-66020760 MsG0280010195.01.T01:intron 45.0%
!! GGAGAGCACCTATATCTAGA+TGG + Chr2:66021798-66021817 None:intergenic 45.0%
!! TAAACAAAAAAATATATATT+TGG + Chr2:66022747-66022766 None:intergenic 5.0%
!!! TTTTTTATAAAATAAATTGT+GGG - Chr2:66019498-66019517 MsG0280010195.01.T01:intron 5.0%
AGGAAGTCACCATGAGAGCA+AGG + Chr2:66022084-66022103 None:intergenic 50.0%
AGTCGGACACCAACTCAAGT+CGG + Chr2:66020243-66020262 None:intergenic 50.0%
AGTCTGGACATGTGTCAGAG+AGG - Chr2:66023789-66023808 MsG0280010195.01.T01:intron 50.0%
ATGATTGTGAGCGGTGGTAC+TGG - Chr2:66020471-66020490 MsG0280010195.01.T01:CDS 50.0%
ATGCTCAACTGCCACTCAAC+GGG + Chr2:66020733-66020752 None:intergenic 50.0%
ATTGCTCAGTAGTTGGGCAG+GGG + Chr2:66021125-66021144 None:intergenic 50.0%
CAGTCTCATCCTCATGACAC+AGG + Chr2:66023529-66023548 None:intergenic 50.0%
CCAAACAGAGCCTTAGTGTG+TGG + Chr2:66019801-66019820 None:intergenic 50.0%
CCAAGCAGTTCCAAAGCTAG+TGG + Chr2:66019260-66019279 None:intergenic 50.0%
CCACACACTAAGGCTCTGTT+TGG - Chr2:66019798-66019817 MsG0280010195.01.T01:intron 50.0%
CTCTTGACGATACAGGAGCA+AGG + Chr2:66021009-66021028 None:intergenic 50.0%
CTTGTTACCCAGGGAGAACA+GGG - Chr2:66022939-66022958 MsG0280010195.01.T01:CDS 50.0%
GAACCGCCAAGGTAACATCT+TGG - Chr2:66024404-66024423 MsG0280010195.01.T01:intron 50.0%
GCTTTCTGACGTGCAGATTC+AGG - Chr2:66021321-66021340 MsG0280010195.01.T01:intron 50.0%
TGCTCTCATGGTGACTTCCT+TGG - Chr2:66022084-66022103 MsG0280010195.01.T01:intron 50.0%
! GCTGCAACTACCACTAGCTT+TGG - Chr2:66019247-66019266 MsG0280010195.01.T01:three_prime_UTR 50.0%
! GCTGGTTTCGTAAGCTATCC+TGG + Chr2:66024890-66024909 None:intergenic 50.0%
! TCTCCAAATTTCGAGGGTGC+AGG - Chr2:66023143-66023162 MsG0280010195.01.T01:intron 50.0%
! TCTTGCGTCAGCACTGGATA+AGG - Chr2:66022998-66023017 MsG0280010195.01.T01:intron 50.0%
!! CCACTAGCTTTGGAACTGCT+TGG - Chr2:66019257-66019276 MsG0280010195.01.T01:three_prime_UTR 50.0%
!! GAGCATTGAATGCTCGGGAA+AGG - Chr2:66020747-66020766 MsG0280010195.01.T01:intron 50.0%
!! GGGTGCAGAGTGGATTAATG+TGG - Chr2:66020953-66020972 MsG0280010195.01.T01:intron 50.0%
!!! CGTTTTTCGAAGAAGCACCG+TGG - Chr2:66021177-66021196 MsG0280010195.01.T01:intron 50.0%
ACACCCCTCACCTTACAAGC+TGG - Chr2:66022568-66022587 MsG0280010195.01.T01:intron 55.0%
CCAAGGTAACATCTTGGCCC+TGG - Chr2:66024410-66024429 MsG0280010195.01.T01:intron 55.0%
CCAGGGCCAAGATGTTACCT+TGG + Chr2:66024413-66024432 None:intergenic 55.0%
CCTGTTCTCCCTGGGTAACA+AGG + Chr2:66022941-66022960 None:intergenic 55.0%
CCTTGTTACCCAGGGAGAAC+AGG - Chr2:66022938-66022957 MsG0280010195.01.T01:CDS 55.0%
CTCTTTAGGCTGAACGGTGC+CGG - Chr2:66021877-66021896 MsG0280010195.01.T01:intron 55.0%
CTGGACATGTGTCAGAGAGG+AGG - Chr2:66023792-66023811 MsG0280010195.01.T01:intron 55.0%
GGCTCAAGGAGGTTATCCAC+AGG - Chr2:66021769-66021788 MsG0280010195.01.T01:intron 55.0%
GGGCCAAGATGTTACCTTGG+CGG + Chr2:66024410-66024429 None:intergenic 55.0%
GGTACAAGCAACCGAGCAAG+TGG - Chr2:66020492-66020511 MsG0280010195.01.T01:CDS 55.0%
GTTGATGCAGTAGCCAGTGC+AGG - Chr2:66024550-66024569 MsG0280010195.01.T01:intron 55.0%
TGAGCTAGCCAACCCCCTTT+AGG - Chr2:66023700-66023719 MsG0280010195.01.T01:intron 55.0%
! GAACGGTGCCGGATTTCTGT+TGG - Chr2:66021888-66021907 MsG0280010195.01.T01:intron 55.0%
!! CGAAGAAGCACCGTGGTTGA+TGG - Chr2:66021184-66021203 MsG0280010195.01.T01:intron 55.0%
!! TGCTTGGTGTTCCCGTTGAG+TGG - Chr2:66020719-66020738 MsG0280010195.01.T01:intron 55.0%
AAGCAACCGAGCAAGTGGCG+TGG - Chr2:66020497-66020516 MsG0280010195.01.T01:intron 60.0%
AGCAACCGAGCAAGTGGCGT+GGG - Chr2:66020498-66020517 MsG0280010195.01.T01:intron 60.0%
ATCAGCCCACGCCACTTGCT+CGG + Chr2:66020506-66020525 None:intergenic 60.0%
CTGAGCACCCTGTTCTCCCT+GGG + Chr2:66022949-66022968 None:intergenic 60.0%
TCTGAGCACCCTGTTCTCCC+TGG + Chr2:66022950-66022969 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr2 gene 66019244 66025783 66019244 ID=MsG0280010195.01;Name=MsG0280010195.01
Chr2 mRNA 66019244 66025783 66019244 ID=MsG0280010195.01.T01;Parent=MsG0280010195.01;Name=MsG0280010195.01.T01;_AED=0.49;_eAED=0.50;_QI=0|0.44|0.4|1|0.88|0.9|10|208|338
Chr2 exon 66019244 66019514 66019244 ID=MsG0280010195.01.T01:exon:5209;Parent=MsG0280010195.01.T01
Chr2 exon 66019623 66019722 66019623 ID=MsG0280010195.01.T01:exon:5208;Parent=MsG0280010195.01.T01
Chr2 exon 66020416 66020514 66020416 ID=MsG0280010195.01.T01:exon:5207;Parent=MsG0280010195.01.T01
Chr2 exon 66020613 66020677 66020613 ID=MsG0280010195.01.T01:exon:5206;Parent=MsG0280010195.01.T01
Chr2 exon 66022008 66022076 66022008 ID=MsG0280010195.01.T01:exon:5205;Parent=MsG0280010195.01.T01
Chr2 exon 66022866 66022971 66022866 ID=MsG0280010195.01.T01:exon:5204;Parent=MsG0280010195.01.T01
Chr2 exon 66023069 66023142 66023069 ID=MsG0280010195.01.T01:exon:5203;Parent=MsG0280010195.01.T01
Chr2 exon 66023237 66023368 66023237 ID=MsG0280010195.01.T01:exon:5202;Parent=MsG0280010195.01.T01
Chr2 exon 66023581 66023690 66023581 ID=MsG0280010195.01.T01:exon:5201;Parent=MsG0280010195.01.T01
Chr2 exon 66025585 66025783 66025585 ID=MsG0280010195.01.T01:exon:5200;Parent=MsG0280010195.01.T01
Chr2 CDS 66025585 66025783 66025585 ID=MsG0280010195.01.T01:cds;Parent=MsG0280010195.01.T01
Chr2 CDS 66023581 66023690 66023581 ID=MsG0280010195.01.T01:cds;Parent=MsG0280010195.01.T01
Chr2 CDS 66023237 66023368 66023237 ID=MsG0280010195.01.T01:cds;Parent=MsG0280010195.01.T01
Chr2 CDS 66023069 66023142 66023069 ID=MsG0280010195.01.T01:cds;Parent=MsG0280010195.01.T01
Chr2 CDS 66022866 66022971 66022866 ID=MsG0280010195.01.T01:cds;Parent=MsG0280010195.01.T01
Chr2 CDS 66022008 66022076 66022008 ID=MsG0280010195.01.T01:cds;Parent=MsG0280010195.01.T01
Chr2 CDS 66020613 66020677 66020613 ID=MsG0280010195.01.T01:cds;Parent=MsG0280010195.01.T01
Chr2 CDS 66020416 66020514 66020416 ID=MsG0280010195.01.T01:cds;Parent=MsG0280010195.01.T01
Chr2 CDS 66019623 66019722 66019623 ID=MsG0280010195.01.T01:cds;Parent=MsG0280010195.01.T01
Chr2 CDS 66019452 66019514 66019452 ID=MsG0280010195.01.T01:cds;Parent=MsG0280010195.01.T01
Chr2 three_prime_UTR 66019244 66019451 66019244 ID=MsG0280010195.01.T01:three_prime_utr;Parent=MsG0280010195.01.T01
Gene Sequence

>MsG0280010195.01.T01

ATGGCTGCAACTACCACTAGCTTTGGAACTGCTTGGTGTCTTAGAAGAGTAACTCAAGCTTTTGCACTTTCTCATTCTCATAATCTCCGCAACAATGCTAACAACCTCTCTTTTCAAAGGACCCTTACCTCTCATCTTCTCTCCTTTTCCACTTCTTCAGGTTACTCTCTACTTTCTTCATCCATTTCTATTTTTTTTTATTCAGGTGCAAGCACGACAGTGCATGCTTCAAAACGAGAAGTTGATGTATTGCTCAAGGGAGTTGGGGAGAAAAGTGTAGAAAATGAAGTGAAGCATGTTCTTGAGATGGCTAGACGAGCATCATTAAAACGAGAGATTCTCCATACAAATTTTCTAACCCCTCCAGTGCTAAAAGAATCTATGCAAGTATTGGAAAAATTAGCGGACATTAAAGCATTGGCTCAAGGAGGTTATCCACAGGCTGAACGGTGCCGGATTTCTGTTGGACATCCAGATGAACTGACAAGTGATCCAGATGTTATTTCGGCATTGAGCATTACAGGGAACTTCCAGTTTGAACCTTGCTCTCATGGTGACTTCCTTGGCTCAATTCTTGGTACAGGAATTGTCAGGGAGAAAGTTGGGGATATTATATTGCAGGGAGAACAGGGTGCTCAGATAATTGTTGTACCAGAGCTTGTAGAATTTCTTGCGTCAGCACTGGATAAGGTTCGTAATGTTCCTGTAACTTGCACCAAGATACCATTAATTTCTCTTGATTATGAACCGCCAAGAACAAAATCATTCAAAACTATAGAAGCGTCACTAAGAGTTGATGCAGTAGCCAGTGCAGGATTTAAGATTTCACGTTCGAAGCTAGTTGACATGATCAGCAATGGCGATGTACGTATCAACTGGATCCCAATTACTACAAAAGGAACCACAATCAAGAGTGGAGATCTTGTATCAGTTAGTGGATTGGGAAGATTAAAGATAGGAGAAGTAAACACCACAAAGAAAGGAAAATTTGCAGTGGAACTCATTCGATATTTGTAG

Protein sequence

>MsG0280010195.01.T01

MAATTTSFGTAWCLRRVTQAFALSHSHNLRNNANNLSFQRTLTSHLLSFSTSSGYSLLSSSISIFFYSGASTTVHASKREVDVLLKGVGEKSVENEVKHVLEMARRASLKREILHTNFLTPPVLKESMQVLEKLADIKALAQGGYPQAERCRISVGHPDELTSDPDVISALSITGNFQFEPCSHGDFLGSILGTGIVREKVGDIILQGEQGAQIIVVPELVEFLASALDKVRNVPVTCTKIPLISLDYEPPRTKSFKTIEASLRVDAVASAGFKISRSKLVDMISNGDVRINWIPITTKGTTIKSGDLVSVSGLGRLKIGEVNTTKKGKFAVELIRYL*