AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017824.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017824.01.T01 MTR_3g112530 85.787 197 11 2 57 244 190 378 6.10e-99 293
MsG0380017824.01.T01 MTR_4g049640 60.571 175 68 1 57 230 191 365 4.18e-57 186
MsG0380017824.01.T01 MTR_4g132400 53.005 183 71 2 63 237 192 367 2.02e-47 161
MsG0380017824.01.T01 MTR_0549s0020 38.974 195 97 3 57 239 301 485 1.23e-31 121
MsG0380017824.01.T01 MTR_4g101880 39.674 184 105 3 60 239 327 508 4.21e-31 120
MsG0380017824.01.T01 MTR_6g045200 39.062 192 95 3 60 239 367 548 4.67e-31 120
MsG0380017824.01.T01 MTR_6g034030 38.021 192 97 3 60 239 376 557 5.19e-31 120
MsG0380017824.01.T01 MTR_6g034030 52.941 102 48 0 60 161 376 477 2.06e-29 115
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017824.01.T01 AT1G62262 58.378 185 60 2 57 232 174 350 1.06e-65 208
MsG0380017824.01.T01 AT1G62280 57.219 187 70 3 57 238 182 363 1.08e-62 201
MsG0380017824.01.T01 AT5G24030 40.513 195 94 3 57 239 394 578 1.92e-36 136
MsG0380017824.01.T01 AT4G27970 39.487 195 96 3 57 239 130 314 1.12e-35 130
MsG0380017824.01.T01 AT4G27970 39.487 195 96 3 57 239 130 314 1.12e-35 130
MsG0380017824.01.T01 AT4G27970 40.104 192 93 3 60 239 282 463 6.84e-35 130
MsG0380017824.01.T01 AT4G27970 40.104 192 93 3 60 239 282 463 6.84e-35 130
MsG0380017824.01.T01 AT5G24030 53.704 108 50 0 60 167 397 504 2.91e-32 123
MsG0380017824.01.T01 AT4G27970 54.902 102 46 0 60 161 282 383 2.34e-30 116
MsG0380017824.01.T01 AT4G27970 54.902 102 46 0 60 161 282 383 2.34e-30 116
MsG0380017824.01.T01 AT1G12480 40.625 192 92 3 60 239 330 511 1.14e-27 110

Find 64 sgRNAs with CRISPR-Local

Find 416 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACACTGGAGATGCAAAATT+TGG 0.184502 3:+101033312 MsG0380017824.01.T01:CDS
ATTAGGGATGGTGCATTATT+TGG 0.229252 3:+101038281 MsG0380017824.01.T01:CDS
AGAGAATGAGCATTAGAATA+TGG 0.254966 3:-101039891 None:intergenic
TTTATCGGTTATAGGGAATT+TGG 0.264543 3:+101038200 MsG0380017824.01.T01:CDS
ACGAGTCATTTATCGGTTAT+AGG 0.288571 3:+101038192 MsG0380017824.01.T01:CDS
CGAGTCATTTATCGGTTATA+GGG 0.320554 3:+101038193 MsG0380017824.01.T01:CDS
AATTAAACAAACAGGTTTGC+AGG 0.325902 3:+101039749 MsG0380017824.01.T01:intron
GGCAGACACAAGACAGGAAT+TGG 0.332418 3:+101033334 MsG0380017824.01.T01:CDS
TTCTTGTTCTTTGCAGCACC+TGG 0.340908 3:+101038375 MsG0380017824.01.T01:CDS
CCAGTGACATGAAGAGGAAT+AGG 0.350256 3:-101038470 None:intergenic
AGCACAAGCTGCAGCAGAAA+TGG 0.354737 3:+101038227 MsG0380017824.01.T01:CDS
AGCACCTGGTGTGGCTAGTC+TGG 0.355273 3:+101038389 MsG0380017824.01.T01:CDS
CTTGCAATGGGATCGTTATC+TGG 0.374425 3:-101039982 None:intergenic
GCCATAGCAAGTACGGTAAC+AGG 0.385140 3:-101039830 None:intergenic
GCAAAGAACAAGAAGAAAAC+TGG 0.389582 3:-101038366 None:intergenic
CGAATCCACGAGTCATTTAT+CGG 0.401344 3:+101038185 MsG0380017824.01.T01:CDS
TTCTCATAGATCTCTTGAAT+AGG 0.405405 3:-101039777 None:intergenic
CTGGTGTGGCTAGTCTGGCT+TGG 0.416273 3:+101038394 MsG0380017824.01.T01:CDS
TCTCATAGATCTCTTGAATA+GGG 0.431380 3:-101039776 None:intergenic
TATTCTAATGCTCATTCTCT+TGG 0.436966 3:+101039894 MsG0380017824.01.T01:CDS
TCCTGTTACCGTACTTGCTA+TGG 0.437754 3:+101039829 MsG0380017824.01.T01:CDS
CTGGCTTGGGAATCTATTGT+TGG 0.443643 3:+101038408 MsG0380017824.01.T01:CDS
CCCGTGTGTGCAAGTTCATA+TGG 0.444698 3:-101033376 None:intergenic
TGGTGTGGCTAGTCTGGCTT+GGG 0.445650 3:+101038395 MsG0380017824.01.T01:CDS
CCTATTCCTCTTCATGTCAC+TGG 0.453775 3:+101038470 MsG0380017824.01.T01:CDS
GAGAATGAGCATTAGAATAT+GGG 0.464878 3:-101039890 None:intergenic
GTGGATTCGCCACCGTCGTT+AGG 0.469191 3:-101038171 None:intergenic
ATCGTCTTCCTGCGTTGTTA+AGG 0.478539 3:+101038343 MsG0380017824.01.T01:CDS
ACACTTTATCAAAGGTTGTC+TGG 0.479220 3:+101038315 MsG0380017824.01.T01:CDS
ACACTGGAGATGCAAAATTT+GGG 0.487911 3:+101033313 MsG0380017824.01.T01:CDS
GCACAAGCTGCAGCAGAAAT+GGG 0.502516 3:+101038228 MsG0380017824.01.T01:CDS
AACAATGAGGATGCTTGCAA+TGG 0.505203 3:-101039995 None:intergenic
ATAGATCTCTTGAATAGGGC+TGG 0.514231 3:-101039772 None:intergenic
CAGTGACATGAAGAGGAATA+GGG 0.514535 3:-101038469 None:intergenic
TGTAGAAGCCATAGCAAGTA+CGG 0.523296 3:-101039837 None:intergenic
TCGGTTATAGGGAATTTGGT+TGG 0.528385 3:+101038204 MsG0380017824.01.T01:CDS
TCCATATGAACTTGCACACA+CGG 0.529328 3:+101033375 MsG0380017824.01.T01:CDS
ACAATGAGGATGCTTGCAAT+GGG 0.531962 3:-101039994 None:intergenic
AAGCTGCAGCAGAAATGGGT+TGG 0.541897 3:+101038232 MsG0380017824.01.T01:CDS
TATGAGAAGGTTTAATGTTG+TGG 0.544630 3:+101039792 MsG0380017824.01.T01:CDS
TGCAGTACCCCACTTGTTAG+CGG 0.544885 3:-101033401 None:intergenic
TATATACCAGTGACATGAAG+AGG 0.567022 3:-101038476 None:intergenic
CACGGGCTCCGCTAACAAGT+GGG 0.573423 3:+101033393 MsG0380017824.01.T01:CDS
AGTGGGGTACTGCAGTCTGC+AGG 0.578505 3:+101033410 MsG0380017824.01.T01:CDS
ACACGGGCTCCGCTAACAAG+TGG 0.582698 3:+101033392 MsG0380017824.01.T01:CDS
AGCAAGTACGGTAACAGGAA+AGG 0.591295 3:-101039825 None:intergenic
TGTTTGTGACACTTTATCAA+AGG 0.592867 3:+101038307 MsG0380017824.01.T01:CDS
TATTCAAGAGATCTATGAGA+AGG 0.595617 3:+101039779 MsG0380017824.01.T01:CDS
GTTCTTTGCAGCACCTGGTG+TGG 0.596453 3:+101038380 MsG0380017824.01.T01:CDS
CAAGCCAGACTAGCCACACC+AGG 0.597287 3:-101038393 None:intergenic
AATTTGGGCAGACACAAGAC+AGG 0.599765 3:+101033328 MsG0380017824.01.T01:CDS
AATAAATGAATTAAACAATG+AGG 0.610002 3:-101040008 None:intergenic
GAGAAGGTTTAATGTTGTGG+TGG 0.620350 3:+101039795 MsG0380017824.01.T01:CDS
AATTATGCACAACAAGTCAA+AGG 0.620636 3:+101039859 MsG0380017824.01.T01:CDS
GATTATGGAGAGGTCAACAC+TGG 0.622320 3:+101033297 None:intergenic
AGAAGGTTTAATGTTGTGGT+GGG 0.625528 3:+101039796 MsG0380017824.01.T01:CDS
TATAACCGATAAATGACTCG+TGG 0.626893 3:-101038190 None:intergenic
CCATATGAACTTGCACACAC+GGG 0.656449 3:+101033376 MsG0380017824.01.T01:CDS
CTTTATCAAAGGTTGTCTGG+TGG 0.678296 3:+101038318 MsG0380017824.01.T01:CDS
ACGGGCTCCGCTAACAAGTG+GGG 0.678804 3:+101033394 MsG0380017824.01.T01:CDS
AAAACTGGCCTTAACAACGC+AGG 0.680269 3:-101038351 None:intergenic
ATGATAACTAGATTATGGAG+AGG 0.694037 3:+101033287 None:intergenic
GAGATCATTCCTAACGACGG+TGG 0.700149 3:+101038162 MsG0380017824.01.T01:CDS
GAAGAGATCATTCCTAACGA+CGG 0.735716 3:+101038159 MsG0380017824.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGTAACTTAATTAATTATT+AGG - Chr3:101039680-101039699 None:intergenic 10.0%
!! TAAATATTAATCAATATTTC+AGG - Chr3:101039719-101039738 None:intergenic 10.0%
!! TATTTAATATTTCAAAATTG+AGG + Chr3:101038821-101038840 MsG0380017824.01.T01:intron 10.0%
!! TGATATGATTATATTTATAA+TGG + Chr3:101033861-101033880 MsG0380017824.01.T01:intron 10.0%
!! TTATTAATTAATTATTGTCT+AGG + Chr3:101033737-101033756 MsG0380017824.01.T01:intron 10.0%
!! TTTAATCTATTAATGTTTAT+TGG + Chr3:101036227-101036246 MsG0380017824.01.T01:intron 10.0%
!!! AAAACTATAATATAAGTTTT+CGG + Chr3:101034189-101034208 MsG0380017824.01.T01:intron 10.0%
!!! AAATAGAATATCTTATTTTT+TGG - Chr3:101034113-101034132 None:intergenic 10.0%
!!! AAATATAATATCTTTTTTCT+TGG + Chr3:101034146-101034165 MsG0380017824.01.T01:intron 10.0%
!!! AAGATATTATATTTTTTTGA+AGG - Chr3:101034140-101034159 None:intergenic 10.0%
!!! AATTTTAGTCATAAATAATT+AGG - Chr3:101036812-101036831 None:intergenic 10.0%
!!! ATAGTTTTTTATTTTGTTTT+CGG + Chr3:101034283-101034302 MsG0380017824.01.T01:intron 10.0%
!!! TCAAAAAATTCAATTTTTTT+GGG + Chr3:101035451-101035470 MsG0380017824.01.T01:intron 10.0%
!! AAAACTATAATTTACATTTC+AGG - Chr3:101034393-101034412 None:intergenic 15.0%
!! AAAATAAATCAAGACAAATT+TGG + Chr3:101034797-101034816 MsG0380017824.01.T01:intron 15.0%
!! AAATAAATCATTATCTTCAT+AGG - Chr3:101038802-101038821 None:intergenic 15.0%
!! AACATAAGAAAATTAGAATA+GGG + Chr3:101036626-101036645 MsG0380017824.01.T01:intron 15.0%
!! AATAAATTACAATTGCTAAA+TGG + Chr3:101036999-101037018 MsG0380017824.01.T01:intron 15.0%
!! ACAAAACTATGAATATTTAT+AGG - Chr3:101037127-101037146 None:intergenic 15.0%
!! ATAGATTAAATATGAATATC+TGG - Chr3:101036217-101036236 None:intergenic 15.0%
!! CTTAAAAATGTATTACTTAT+AGG - Chr3:101033806-101033825 None:intergenic 15.0%
!! TAACATAAGAAAATTAGAAT+AGG + Chr3:101036625-101036644 MsG0380017824.01.T01:intron 15.0%
!! TTTGTTAAAAGTTTGAAAAA+TGG - Chr3:101037416-101037435 None:intergenic 15.0%
!!! AAAAATTGAATTTTTTGACA+AGG - Chr3:101035449-101035468 None:intergenic 15.0%
!!! AAAATGTGATTTTATTTTGT+AGG + Chr3:101037311-101037330 MsG0380017824.01.T01:intron 15.0%
!!! AAAATTGAATTTTTTGACAA+GGG - Chr3:101035448-101035467 None:intergenic 15.0%
!!! AATAAATGATGATTTTGTAA+AGG - Chr3:101038574-101038593 None:intergenic 15.0%
!!! AATTAAATAAGTAATGGTTT+TGG - Chr3:101038068-101038087 None:intergenic 15.0%
!!! ATATTTTTTTTTTTGAGAGA+TGG - Chr3:101034084-101034103 None:intergenic 15.0%
!!! ATGTTTATTTTTCTTTAAGA+TGG + Chr3:101037946-101037965 MsG0380017824.01.T01:intron 15.0%
!!! ATTAAATAAGTAATGGTTTT+GGG - Chr3:101038067-101038086 None:intergenic 15.0%
!!! GAAATTTTACATGTAAAAAA+AGG + Chr3:101034500-101034519 MsG0380017824.01.T01:intron 15.0%
!!! GTCAAAAAATTCAATTTTTT+TGG + Chr3:101035450-101035469 MsG0380017824.01.T01:intron 15.0%
!!! GTTTTAGTTTTTTTAGTTTT+TGG + Chr3:101035079-101035098 MsG0380017824.01.T01:intron 15.0%
!!! TATAAAGTCACTTATAATTT+TGG + Chr3:101038719-101038738 MsG0380017824.01.T01:intron 15.0%
!!! TATATTTTCCATATGTTTTT+AGG + Chr3:101035872-101035891 MsG0380017824.01.T01:intron 15.0%
!!! TTTTATGACTATAACATAAA+GGG - Chr3:101037384-101037403 None:intergenic 15.0%
!!! TTTTTATGTTTTGATGTTTT+AGG + Chr3:101035395-101035414 MsG0380017824.01.T01:intron 15.0%
!!! TTTTTTTAGTATACTTGTTA+AGG - Chr3:101037732-101037751 None:intergenic 15.0%
!! AAAAAAAAAGAGAGAGAAAA+TGG - Chr3:101037064-101037083 None:intergenic 20.0%
!! AAAAATTTAACCACATATGA+AGG + Chr3:101034253-101034272 MsG0380017824.01.T01:intron 20.0%
!! AAAATTTAACCACATATGAA+GGG + Chr3:101034254-101034273 MsG0380017824.01.T01:intron 20.0%
!! AAATTCAAACTTATCAATTG+AGG - Chr3:101039535-101039554 None:intergenic 20.0%
!! AACAACTACAGTTTAAATTA+GGG - Chr3:101038754-101038773 None:intergenic 20.0%
!! AATGCTGATGAAAAATTTAT+AGG - Chr3:101037186-101037205 None:intergenic 20.0%
!! AGAAAAATAAACATCTTAAG+AGG - Chr3:101037940-101037959 None:intergenic 20.0%
!! ATCATCATTTATTAATGATG+TGG + Chr3:101038581-101038600 MsG0380017824.01.T01:intron 20.0%
!! ATGCTGATGAAAAATTTATA+GGG - Chr3:101037185-101037204 None:intergenic 20.0%
!! ATTAAATATGAATATCTGGT+GGG - Chr3:101036213-101036232 None:intergenic 20.0%
!! CATGTACTTATAAATTGATA+GGG - Chr3:101039275-101039294 None:intergenic 20.0%
!! CCAAATATATATTACAAATG+TGG - Chr3:101036591-101036610 None:intergenic 20.0%
!! CCACATTTGTAATATATATT+TGG + Chr3:101036588-101036607 MsG0380017824.01.T01:intron 20.0%
!! CCATAGAATTAAATAAGTAA+TGG - Chr3:101038074-101038093 None:intergenic 20.0%
!! CCATTACTTATTTAATTCTA+TGG + Chr3:101038071-101038090 MsG0380017824.01.T01:intron 20.0%
!! CTCTATAAAAATACATATAG+AGG - Chr3:101035664-101035645 None:intergenic 20.0%
!! CTCTATAAAAATACATATAG+TGG + Chr3:101035645-101035664 MsG0380017824.01.T01:intron 20.0%
!! GATGTGAAATATAAGTATTT+CGG + Chr3:101034307-101034326 MsG0380017824.01.T01:intron 20.0%
!! TACTTATTTAATTCTATGGT+GGG + Chr3:101038075-101038094 MsG0380017824.01.T01:intron 20.0%
!! TATAAGGGAATTTATATTTG+TGG - Chr3:101037545-101037564 None:intergenic 20.0%
!! TTACTTATTTAATTCTATGG+TGG + Chr3:101038074-101038093 MsG0380017824.01.T01:intron 20.0%
!! TTATGTTGAATTAAACAAAC+AGG + Chr3:101039741-101039760 MsG0380017824.01.T01:intron 20.0%
!! TTTCTAAACTAGGAAAAAAA+TGG - Chr3:101034053-101034072 None:intergenic 20.0%
!!! AAATGTGTGATTTTATTTGT+AGG - Chr3:101037158-101037177 None:intergenic 20.0%
!!! AAATTGTAGTTTTCAAAGTT+AGG - Chr3:101034912-101034931 None:intergenic 20.0%
!!! AACATTCTCTTCTTTTTAAA+TGG - Chr3:101033458-101033477 None:intergenic 20.0%
!!! AATGTGTGATTTTATTTGTA+GGG - Chr3:101037157-101037176 None:intergenic 20.0%
!!! AATTGTAGTTTTCAAAGTTA+GGG - Chr3:101034911-101034930 None:intergenic 20.0%
!!! ACTTTGAAAACTACAATTTT+TGG + Chr3:101034913-101034932 MsG0380017824.01.T01:intron 20.0%
!!! CAATCATTTTTTGACAATTT+TGG - Chr3:101039156-101039175 None:intergenic 20.0%
!!! CACTATATGTATTTTTATAG+AGG - Chr3:101035647-101035666 None:intergenic 20.0%
!!! CTCTATATGTATTTTTATAG+AGG + Chr3:101035329-101035348 MsG0380017824.01.T01:intron 20.0%
!!! CTGATGGAAAAAATTTTATA+GGG - Chr3:101037245-101037264 None:intergenic 20.0%
!!! GGAAAAAATATTTCTAAACT+AGG - Chr3:101034063-101034082 None:intergenic 20.0%
!!! GTTTTATGACTATAACATAA+AGG - Chr3:101037385-101037404 None:intergenic 20.0%
!!! TGGTTAAATTTTTCGAAAAA+GGG - Chr3:101034246-101034265 None:intergenic 20.0%
!!! TGTTTTTTCCTAAAAACATA+TGG - Chr3:101035883-101035902 None:intergenic 20.0%
!!! TTCTGATGGAAAATTTTATA+AGG - Chr3:101037215-101037234 None:intergenic 20.0%
!!! TTTTACAAAAAAATTCTGGT+AGG + Chr3:101039228-101039247 MsG0380017824.01.T01:intron 20.0%
!!! TTTTACAAAGTATGATAGAA+AGG + Chr3:101038636-101038655 MsG0380017824.01.T01:intron 20.0%
! AAAGTTGCGATTATTAGATA+AGG - Chr3:101034958-101034977 None:intergenic 25.0%
! AACTAGGAAAAAAATGGATA+CGG - Chr3:101034047-101034066 None:intergenic 25.0%
! AAGAAAAAACATTTCCTGTT+TGG - Chr3:101034342-101034361 None:intergenic 25.0%
! AAGTTGCATAATTAACATGT+AGG + Chr3:101036833-101036852 MsG0380017824.01.T01:intron 25.0%
! AAGTTGCGATTATTAGATAA+GGG - Chr3:101034957-101034976 None:intergenic 25.0%
! AATTAGAATAGAGAAGATGA+TGG - Chr3:101036100-101036119 None:intergenic 25.0%
! AATTATTGTCTAGGTCAATT+AGG + Chr3:101033746-101033765 MsG0380017824.01.T01:intron 25.0%
! ACACCTCTACAAAAATATAT+AGG - Chr3:101035012-101035031 None:intergenic 25.0%
! ACATGTCCTCTATATATATT+TGG + Chr3:101034836-101034855 MsG0380017824.01.T01:intron 25.0%
! ATACAACAAGAGTAGTATAA+GGG - Chr3:101037560-101037579 None:intergenic 25.0%
! ATACTAAAAAAACTTCATGC+AGG + Chr3:101037740-101037759 MsG0380017824.01.T01:intron 25.0%
! CAACAACTACAGTTTAAATT+AGG - Chr3:101038755-101038774 None:intergenic 25.0%
! CAAGTAACTGTCAATTAATA+AGG - Chr3:101039362-101039381 None:intergenic 25.0%
! CATATCAAGCAAAATCATTT+AGG + Chr3:101033623-101033642 MsG0380017824.01.T01:intron 25.0%
! CTCCAAAAAAGAATCAAATA+TGG - Chr3:101036320-101036339 None:intergenic 25.0%
! CTTCATTCAAACATACATAT+AGG - Chr3:101033976-101033995 None:intergenic 25.0%
! CTTTAGCCAAATATATATAG+AGG - Chr3:101034845-101034864 None:intergenic 25.0%
! GATTAAATATGAATATCTGG+TGG - Chr3:101036214-101036233 None:intergenic 25.0%
! GCATGTACTTATAAATTGAT+AGG - Chr3:101039276-101039295 None:intergenic 25.0%
! GTTCTCGATGTTAAAATTTA+CGG + Chr3:101038118-101038137 MsG0380017824.01.T01:intron 25.0%
! TAGACTTATTCGAAATGTTA+CGG - Chr3:101035683-101035702 None:intergenic 25.0%
! TATAAAAATCCCTTCATATG+TGG - Chr3:101034266-101034285 None:intergenic 25.0%
! TATGAACACATGTATTAGAA+TGG + Chr3:101036954-101036973 MsG0380017824.01.T01:intron 25.0%
! TCTTATGTTAGATACAAAAC+AGG - Chr3:101036615-101036634 None:intergenic 25.0%
! TTAATCTCTACATAGAGAAT+AGG + Chr3:101039570-101039589 MsG0380017824.01.T01:intron 25.0%
! TTCAGGTATGAAAAAAATTC+AGG - Chr3:101034433-101034452 None:intergenic 25.0%
! TTGATAAGTTTGAATTTACC+CGG + Chr3:101039538-101039557 MsG0380017824.01.T01:intron 25.0%
!! AAAATAGAATTTTCCGACAA+CGG - Chr3:101035132-101035151 None:intergenic 25.0%
!! AAACAAATTGTGATTTTGCA+CGG + Chr3:101035562-101035581 MsG0380017824.01.T01:intron 25.0%
!! ACATTTTCCTTAAGCATTTT+AGG - Chr3:101037279-101037298 None:intergenic 25.0%
!! ACTTGTTAAGGATCTTATTA+AGG - Chr3:101037720-101037739 None:intergenic 25.0%
!! ATTGTAGTTTTCAAAGTTAG+GGG - Chr3:101034910-101034929 None:intergenic 25.0%
!! ATTTTGTAGTATGTCCAAAA+AGG - Chr3:101034604-101034623 None:intergenic 25.0%
!! CAACTTCTATGTAACTTTTT+CGG + Chr3:101035210-101035229 MsG0380017824.01.T01:intron 25.0%
!! CATTTTCCTTAAGCATTTTA+GGG - Chr3:101037278-101037297 None:intergenic 25.0%
!! CGTATTTTCTATGTGTTTTT+AGG - Chr3:101034674-101034693 None:intergenic 25.0%
!! GAATTTATATTTGTGGATTG+TGG - Chr3:101037538-101037557 None:intergenic 25.0%
!! GACTATTAATGTTTTTCACA+TGG + Chr3:101036482-101036501 MsG0380017824.01.T01:intron 25.0%
!! GATATTGTGTTAAAAGTGTA+TGG + Chr3:101036430-101036449 MsG0380017824.01.T01:intron 25.0%
!! GCTGATGGAAAAAATTTTAT+AGG - Chr3:101037246-101037265 None:intergenic 25.0%
!! GGCTTTTTACAAAAAAATTC+TGG + Chr3:101039224-101039243 MsG0380017824.01.T01:intron 25.0%
!! TTTTGGCCCTATATATTTTT+TGG + Chr3:101034930-101034949 MsG0380017824.01.T01:intron 25.0%
!!! CACATTAGTGTTTTGAATTA+TGG + Chr3:101039489-101039508 MsG0380017824.01.T01:intron 25.0%
!!! CTCTCTCTTTTTTTTTCAAA+TGG + Chr3:101037068-101037087 MsG0380017824.01.T01:intron 25.0%
!!! GATTTTTTGTACACATGTTT+AGG - Chr3:101035496-101035515 None:intergenic 25.0%
!!! GTGGTTAAATTTTTCGAAAA+AGG - Chr3:101034247-101034266 None:intergenic 25.0%
!!! GTTTGATTTGGAAATTTCTT+GGG - Chr3:101037620-101037639 None:intergenic 25.0%
!!! TAGAGATTAATCTTTAGAAC+CGG - Chr3:101039560-101039579 None:intergenic 25.0%
!!! TAGCCTATATATTTTTGTAG+AGG + Chr3:101035006-101035025 MsG0380017824.01.T01:intron 25.0%
!!! TATTTGATTCTTTTTTGGAG+CGG + Chr3:101036320-101036339 MsG0380017824.01.T01:intron 25.0%
!!! TCAAATGGACTTTTATGTTA+GGG + Chr3:101037083-101037102 MsG0380017824.01.T01:intron 25.0%
!!! TGCCATATTTGATTCTTTTT+TGG + Chr3:101036315-101036334 MsG0380017824.01.T01:intron 25.0%
!!! TGTTTGATTTGGAAATTTCT+TGG - Chr3:101037621-101037640 None:intergenic 25.0%
!!! TTATTTTTGCACACATGTTA+AGG - Chr3:101035179-101035198 None:intergenic 25.0%
!!! TTCAAATGGACTTTTATGTT+AGG + Chr3:101037082-101037101 MsG0380017824.01.T01:intron 25.0%
!!! TTTTCTAAAACTCTCATCAA+CGG - Chr3:101033712-101033731 None:intergenic 25.0%
AAAACAATGGAGAGAGAAAA+AGG + Chr3:101039084-101039103 MsG0380017824.01.T01:intron 30.0%
AAAACATAAAAACATCGACC+TGG - Chr3:101035387-101035406 None:intergenic 30.0%
AAAATAAACCGAGACTTAGT+TGG + Chr3:101035598-101035617 MsG0380017824.01.T01:intron 30.0%
AAAATTGAATGAGATGTCGT+AGG + Chr3:101036263-101036282 MsG0380017824.01.T01:intron 30.0%
AAAGATAGTTAACTCCTACA+TGG - Chr3:101037991-101038010 None:intergenic 30.0%
AACTTATCAATTGAGGTTAG+TGG - Chr3:101039528-101039547 None:intergenic 30.0%
AAGGGGCCAAAAAATATATA+GGG - Chr3:101034939-101034958 None:intergenic 30.0%
AATAGAAACCATGAAATCCA+TGG - Chr3:101038019-101038038 None:intergenic 30.0%
AATTAAACAAACAGGTTTGC+AGG + Chr3:101039749-101039768 MsG0380017824.01.T01:intron 30.0%
AATTAGAATAGGGATCACTT+TGG + Chr3:101036636-101036655 MsG0380017824.01.T01:intron 30.0%
AATTATGCACAACAAGTCAA+AGG + Chr3:101039859-101039878 MsG0380017824.01.T01:CDS 30.0%
ACACAACTGTGGATATTTAT+AGG + Chr3:101037340-101037359 MsG0380017824.01.T01:intron 30.0%
AGAGAATGAGCATTAGAATA+TGG - Chr3:101039894-101039913 None:intergenic 30.0%
AGTTGCGATTATTAGATAAG+GGG - Chr3:101034956-101034975 None:intergenic 30.0%
ATAAAAGATTCAGATAGGCT+AGG - Chr3:101036048-101036067 None:intergenic 30.0%
ATGTAGGTACAAGGTAATTT+GGG + Chr3:101034565-101034584 MsG0380017824.01.T01:intron 30.0%
ATGTTAAAATTTACGGCCAA+TGG + Chr3:101038125-101038144 MsG0380017824.01.T01:intron 30.0%
CACAACTGTGGATATTTATA+GGG + Chr3:101037341-101037360 MsG0380017824.01.T01:intron 30.0%
CATACAACAAGAGTAGTATA+AGG - Chr3:101037561-101037580 None:intergenic 30.0%
CATACTATACTCGAAAATGA+AGG + Chr3:101034474-101034493 MsG0380017824.01.T01:intron 30.0%
GAACAATTCTATCGTCAATT+TGG + Chr3:101033771-101033790 MsG0380017824.01.T01:intron 30.0%
GACATTGTCAGACATTATAA+CGG + Chr3:101036904-101036923 MsG0380017824.01.T01:intron 30.0%
GAGAATGAGCATTAGAATAT+GGG - Chr3:101039893-101039912 None:intergenic 30.0%
TAAGGGGCCAAAAAATATAT+AGG - Chr3:101034940-101034959 None:intergenic 30.0%
TAGATAACATGACTTGACAT+TGG - Chr3:101039443-101039462 None:intergenic 30.0%
TAGGGACATTCTATATTGTA+CGG - Chr3:101039257-101039276 None:intergenic 30.0%
TATAGGGACTAAAATTCTGA+TGG - Chr3:101037229-101037248 None:intergenic 30.0%
TATGAGAAGGTTTAATGTTG+TGG + Chr3:101039792-101039811 MsG0380017824.01.T01:CDS 30.0%
TATTCAAGAGATCTATGAGA+AGG + Chr3:101039779-101039798 MsG0380017824.01.T01:CDS 30.0%
TATTCTAATGCTCATTCTCT+TGG + Chr3:101039894-101039913 MsG0380017824.01.T01:CDS 30.0%
TCAACAAAGTTGTCATCAAA+TGG - Chr3:101039035-101039054 None:intergenic 30.0%
TCATTTCTATCAGACAAAAC+AGG + Chr3:101039184-101039203 MsG0380017824.01.T01:intron 30.0%
TCTCATAGATCTCTTGAATA+GGG - Chr3:101039779-101039798 None:intergenic 30.0%
TGACAATAGGAAAATCAACA+TGG + Chr3:101037585-101037604 MsG0380017824.01.T01:intron 30.0%
TGTTGTATGAGTTTGACAAT+AGG + Chr3:101037572-101037591 MsG0380017824.01.T01:intron 30.0%
TGTTTGTGACACTTTATCAA+AGG + Chr3:101038307-101038326 MsG0380017824.01.T01:CDS 30.0%
TTCATCACTAGATCAATCTT+AGG + Chr3:101033833-101033852 MsG0380017824.01.T01:intron 30.0%
TTCTCATAGATCTCTTGAAT+AGG - Chr3:101039780-101039799 None:intergenic 30.0%
TTTAGTCCCTAAAATGCTTA+AGG + Chr3:101037269-101037288 MsG0380017824.01.T01:intron 30.0%
! AAAACAAGTGAGAAAGTATG+TGG + Chr3:101035897-101035916 MsG0380017824.01.T01:intron 30.0%
! AAGACAAATTTGGAATGCTA+CGG + Chr3:101034807-101034826 MsG0380017824.01.T01:intron 30.0%
! ACATGCAAGGATTTTATAGT+AGG - Chr3:101037494-101037513 None:intergenic 30.0%
! AGAAAAGCAATTTTCATCTC+AGG - Chr3:101034635-101034654 None:intergenic 30.0%
! AGCGGTTTGATTTACTATAA+TGG + Chr3:101036338-101036357 MsG0380017824.01.T01:intron 30.0%
! ATGCAAGGATTTTATAGTAG+GGG - Chr3:101037492-101037511 None:intergenic 30.0%
! ATGTTTTCCATAGTAATGCT+TGG - Chr3:101037796-101037815 None:intergenic 30.0%
! ATTAGGCAACTTGAGTTTTA+AGG - Chr3:101036795-101036814 None:intergenic 30.0%
! CATGCAAGGATTTTATAGTA+GGG - Chr3:101037493-101037512 None:intergenic 30.0%
! CTTGATTTTGTGCTGTAATT+TGG + Chr3:101039318-101039337 MsG0380017824.01.T01:intron 30.0%
! GAAAAGCAATTTTCATCTCA+GGG - Chr3:101034634-101034653 None:intergenic 30.0%
! GGTTTGATTTACTATAATGG+AGG + Chr3:101036341-101036360 MsG0380017824.01.T01:intron 30.0%
! TTGTAGTTTTCAAAGTTAGG+GGG - Chr3:101034909-101034928 None:intergenic 30.0%
! TTGTGTTAAAAGTGTATGGT+AGG + Chr3:101036434-101036453 MsG0380017824.01.T01:intron 30.0%
! TTTATCGGTTATAGGGAATT+TGG + Chr3:101038200-101038219 MsG0380017824.01.T01:CDS 30.0%
!! AATCGCAACTTTTGAAAGAT+AGG + Chr3:101034966-101034985 MsG0380017824.01.T01:intron 30.0%
!! AGAGATTAATCTTTAGAACC+GGG - Chr3:101039559-101039578 None:intergenic 30.0%
!! AGGTGATGGATAATTAGATA+AGG - Chr3:101035997-101036016 None:intergenic 30.0%
!! ATCGCAACTTTTGAAAGATA+GGG + Chr3:101034967-101034986 MsG0380017824.01.T01:intron 30.0%
!! CGCAACTTTTTGAAAGATAA+GGG - Chr3:101034880-101034899 None:intergenic 30.0%
!! CTGTGTGTTTGTTTTCATTA+GGG + Chr3:101038265-101038284 MsG0380017824.01.T01:CDS 30.0%
!! GCAACTTTTTGAAAGATAAG+GGG - Chr3:101034879-101034898 None:intergenic 30.0%
!! GGCAAAATTCGAATTTTTAG+TGG + Chr3:101034521-101034540 MsG0380017824.01.T01:intron 30.0%
!! TCGCAACTTTTTGAAAGATA+AGG - Chr3:101034881-101034900 None:intergenic 30.0%
!! TGGGAAAATTACTTTTCTCA+CGG - Chr3:101036551-101036570 None:intergenic 30.0%
!! TTAGGCAACTTGAGTTTTAA+GGG - Chr3:101036794-101036813 None:intergenic 30.0%
!! TTCGGAAATTTTAACCAAAC+AGG + Chr3:101034325-101034344 MsG0380017824.01.T01:intron 30.0%
!!! CAGGTTACAATTTATTTTGC+TGG - Chr3:101034374-101034393 None:intergenic 30.0%
!!! CTTGAGTTTTAAGGGTTTAT+CGG - Chr3:101036786-101036805 None:intergenic 30.0%
!!! TCGAATTTTTAGTGGTTTGT+TGG + Chr3:101034529-101034548 MsG0380017824.01.T01:intron 30.0%
!!! TTGAGTTTTAAGGGTTTATC+GGG - Chr3:101036785-101036804 None:intergenic 30.0%
AAAGTACACATGTAGGTACA+AGG + Chr3:101034556-101034575 MsG0380017824.01.T01:intron 35.0%
AACACTGGAGATGCAAAATT+TGG + Chr3:101033312-101033331 MsG0380017824.01.T01:CDS 35.0%
ACACAAAAGTGAACCAGAAA+AGG + Chr3:101036133-101036152 MsG0380017824.01.T01:intron 35.0%
ACACTGGAGATGCAAAATTT+GGG + Chr3:101033313-101033332 MsG0380017824.01.T01:CDS 35.0%
ACACTTTATCAAAGGTTGTC+TGG + Chr3:101038315-101038334 MsG0380017824.01.T01:CDS 35.0%
ACCAAAATCAACCTCGTTAA+TGG + Chr3:101037682-101037701 MsG0380017824.01.T01:intron 35.0%
AGAAGGTTTAATGTTGTGGT+GGG + Chr3:101039796-101039815 MsG0380017824.01.T01:CDS 35.0%
AGAGAAATAGAAACGGGAAA+AGG + Chr3:101036381-101036400 MsG0380017824.01.T01:intron 35.0%
AGAGAGAAAGAAATTGGATC+AGG - Chr3:101036022-101036041 None:intergenic 35.0%
AGTACTATGAAAACAGAGGA+CGG - Chr3:101037872-101037891 None:intergenic 35.0%
ATATTTAATCCGTCCGTTGT+CGG + Chr3:101035116-101035135 MsG0380017824.01.T01:intron 35.0%
ATTAGGGATGGTGCATTATT+TGG + Chr3:101038281-101038300 MsG0380017824.01.T01:CDS 35.0%
ATTTGGACGTACAAGATGAA+AGG + Chr3:101039335-101039354 MsG0380017824.01.T01:intron 35.0%
ATTTGGCTAAAGTGCAACTT+TGG + Chr3:101034853-101034872 MsG0380017824.01.T01:intron 35.0%
CAACCTCTATTTCACTATTC+CGG + Chr3:101035527-101035546 MsG0380017824.01.T01:intron 35.0%
CAATTCTATCGTCAATTTGG+AGG + Chr3:101033774-101033793 MsG0380017824.01.T01:intron 35.0%
CACAAAAGTGAACCAGAAAA+GGG + Chr3:101036134-101036153 MsG0380017824.01.T01:intron 35.0%
CAGCTCAAAATTCTATTTCC+AGG + Chr3:101035366-101035385 MsG0380017824.01.T01:intron 35.0%
CAGTAAGAAGTGAGAAAACA+AGG - Chr3:101039061-101039080 None:intergenic 35.0%
CATGTAGGTACAAGGTAATT+TGG + Chr3:101034564-101034583 MsG0380017824.01.T01:intron 35.0%
CCATAGTACTATGAAAACAG+AGG - Chr3:101037876-101037895 None:intergenic 35.0%
CGTGTTGTATTAAATGCGTA+AGG + Chr3:101036681-101036700 MsG0380017824.01.T01:intron 35.0%
CTTCTTACTGGTCAAAACAA+TGG + Chr3:101039071-101039090 MsG0380017824.01.T01:intron 35.0%
GAAGAATTCTTACACCATGT+AGG + Chr3:101037974-101037993 MsG0380017824.01.T01:intron 35.0%
GACAAGCTCAATGTTTGATT+TGG - Chr3:101037632-101037651 None:intergenic 35.0%
GCAAAGAACAAGAAGAAAAC+TGG - Chr3:101038369-101038388 None:intergenic 35.0%
GCTGGATAAAAGATTCAGAT+AGG - Chr3:101036053-101036072 None:intergenic 35.0%
GTAAACCTTGTCATTACTTG+AGG - Chr3:101038874-101038893 None:intergenic 35.0%
GTAGTATTCCAACTAAGTCT+CGG - Chr3:101035609-101035628 None:intergenic 35.0%
GTTGGACAGATTGTAGAAAA+AGG - Chr3:101039419-101039438 None:intergenic 35.0%
TATAACCGATAAATGACTCG+TGG - Chr3:101038193-101038212 None:intergenic 35.0%
TATATACCAGTGACATGAAG+AGG - Chr3:101038479-101038498 None:intergenic 35.0%
TATTGTCTAGGTCAATTAGG+AGG + Chr3:101033749-101033768 MsG0380017824.01.T01:intron 35.0%
TCGGAGTCAAACTTTACATA+TGG - Chr3:101036175-101036194 None:intergenic 35.0%
TCTAAAGAGATGATAATCGC+AGG - Chr3:101033498-101033517 None:intergenic 35.0%
TCTTCCCTTTAGTAAACCAT+TGG - Chr3:101038144-101038163 None:intergenic 35.0%
TGGGAAGTGATGTGAAAATT+CGG - Chr3:101036194-101036213 None:intergenic 35.0%
TTAGGGACTAAAAATGCTGA+TGG - Chr3:101037261-101037280 None:intergenic 35.0%
TTCATACCTGAAATGTCATG+TGG + Chr3:101034441-101034460 MsG0380017824.01.T01:intron 35.0%
TTGAACCAACAGTAGTTAAC+TGG + Chr3:101035778-101035797 MsG0380017824.01.T01:intron 35.0%
TTTAACATCGAGAACAACCA+CGG - Chr3:101038113-101038132 None:intergenic 35.0%
TTTCCCATGAGATTGACAAT+CGG + Chr3:101036564-101036583 MsG0380017824.01.T01:intron 35.0%
! ACGAGTCATTTATCGGTTAT+AGG + Chr3:101038192-101038211 MsG0380017824.01.T01:CDS 35.0%
! CCTCTGTTTTCATAGTACTA+TGG + Chr3:101037873-101037892 MsG0380017824.01.T01:intron 35.0%
! CGAGTCATTTATCGGTTATA+GGG + Chr3:101038193-101038212 MsG0380017824.01.T01:CDS 35.0%
! GAGAAAGTATGTGGATTCTA+GGG + Chr3:101035906-101035925 MsG0380017824.01.T01:intron 35.0%
! TATGTTGTTAAGCCCTTTTC+TGG - Chr3:101036149-101036168 None:intergenic 35.0%
! TGAGAAAGTATGTGGATTCT+AGG + Chr3:101035905-101035924 MsG0380017824.01.T01:intron 35.0%
! TGCAAGGATTTTATAGTAGG+GGG - Chr3:101037491-101037510 None:intergenic 35.0%
! TGGTATGAAAGTACACATGT+AGG + Chr3:101034549-101034568 MsG0380017824.01.T01:intron 35.0%
! TTAACTATCTTTTCGCTCCA+TGG + Chr3:101037999-101038018 MsG0380017824.01.T01:intron 35.0%
! TTCAGAATTAGCCTCTCATT+TGG + Chr3:101037767-101037786 MsG0380017824.01.T01:intron 35.0%
!! AAAGCCAATAGTGTTGACTA+AGG - Chr3:101039210-101039229 None:intergenic 35.0%
!! ACCATTAACGAGGTTGATTT+TGG - Chr3:101037686-101037705 None:intergenic 35.0%
!! CTTGTTTTCTCACTTCTTAC+TGG + Chr3:101039059-101039078 MsG0380017824.01.T01:intron 35.0%
!! GAAAATTACTTTTCTCACGG+TGG - Chr3:101036548-101036567 None:intergenic 35.0%
!! GCTGTGTGTTTGTTTTCATT+AGG + Chr3:101038264-101038283 MsG0380017824.01.T01:CDS 35.0%
!! GTGTTTGTTTTCATTAGGGA+TGG + Chr3:101038269-101038288 MsG0380017824.01.T01:CDS 35.0%
!! TCGCAACTTTTGAAAGATAG+GGG + Chr3:101034968-101034987 MsG0380017824.01.T01:intron 35.0%
!!! AATTCTATGGTGGGTTTTCA+CGG + Chr3:101038084-101038103 MsG0380017824.01.T01:intron 35.0%
!!! GAGGTTGATTTTGGTTATTG+TGG - Chr3:101037677-101037696 None:intergenic 35.0%
!!! GTGAGCTGCTTTTAATCTAA+CGG - Chr3:101035975-101035994 None:intergenic 35.0%
!!! TTGGGAGAGATGTGTTTTTT+TGG + Chr3:101035469-101035488 MsG0380017824.01.T01:intron 35.0%
AACAATGAGGATGCTTGCAA+TGG - Chr3:101039998-101040017 None:intergenic 40.0%
AAGGGTTTATCGGGAGTTTA+GGG - Chr3:101036776-101036795 None:intergenic 40.0%
AATCTAACGGCGAAATTGAG+TGG - Chr3:101035962-101035981 None:intergenic 40.0%
ACAATGAGGATGCTTGCAAT+GGG - Chr3:101039997-101040016 None:intergenic 40.0%
ACATGACTTGACATTGGAGT+TGG - Chr3:101039437-101039456 None:intergenic 40.0%
ACGGCCAATGGTTTACTAAA+GGG + Chr3:101038137-101038156 MsG0380017824.01.T01:intron 40.0%
AGAGAGAAAAAGGAAGAGAG+AGG + Chr3:101039094-101039113 MsG0380017824.01.T01:intron 40.0%
AGAGAGAAAATGGTCCATTC+TGG - Chr3:101037054-101037073 None:intergenic 40.0%
AGAGATGATAATCGCAGGTT+AGG - Chr3:101033493-101033512 None:intergenic 40.0%
AGATGTCGTAGGCTTGATTA+GGG + Chr3:101036274-101036293 MsG0380017824.01.T01:intron 40.0%
AGGCAGAGAGAGAAAGAAAT+TGG - Chr3:101036028-101036047 None:intergenic 40.0%
ATACCTGAAATGTCATGTGG+AGG + Chr3:101034444-101034463 MsG0380017824.01.T01:intron 40.0%
ATAGATCTCTTGAATAGGGC+TGG - Chr3:101039775-101039794 None:intergenic 40.0%
ATCACAATCAATGCTCTACC+AGG + Chr3:101035737-101035756 MsG0380017824.01.T01:intron 40.0%
ATTCGCAAAGACAACCAGAA+TGG + Chr3:101037037-101037056 MsG0380017824.01.T01:intron 40.0%
CAACAGTAGTTAACTGGAGT+TGG + Chr3:101035784-101035803 MsG0380017824.01.T01:intron 40.0%
CAACTCCAGTTAACTACTGT+TGG - Chr3:101035786-101035805 None:intergenic 40.0%
CAATCGTGATTTACGCGTTT+CGG + Chr3:101034764-101034783 MsG0380017824.01.T01:intron 40.0%
CAGTGACATGAAGAGGAATA+GGG - Chr3:101038472-101038491 None:intergenic 40.0%
CGAATCCACGAGTCATTTAT+CGG + Chr3:101038185-101038204 MsG0380017824.01.T01:CDS 40.0%
CGAGAGCAGAGAAATAGAAA+CGG + Chr3:101036374-101036393 MsG0380017824.01.T01:intron 40.0%
CGTCATCTTCTATGAACATG+TGG - Chr3:101036663-101036682 None:intergenic 40.0%
CTCTTCCTCAAGTAATGACA+AGG + Chr3:101038866-101038885 MsG0380017824.01.T01:intron 40.0%
CTTTATCAAAGGTTGTCTGG+TGG + Chr3:101038318-101038337 MsG0380017824.01.T01:CDS 40.0%
GAAAGAAATTGGATCAGGTG+AGG - Chr3:101036017-101036036 None:intergenic 40.0%
GAAGAGATCATTCCTAACGA+CGG + Chr3:101038159-101038178 MsG0380017824.01.T01:CDS 40.0%
GAGAAGGTTTAATGTTGTGG+TGG + Chr3:101039795-101039814 MsG0380017824.01.T01:CDS 40.0%
GAGAGCAGAGAAATAGAAAC+GGG + Chr3:101036375-101036394 MsG0380017824.01.T01:intron 40.0%
GAGTGCTAGTCGAAATAGTA+CGG + Chr3:101035293-101035312 MsG0380017824.01.T01:intron 40.0%
GGTTCAAGTGCACTTAAGTT+TGG - Chr3:101035765-101035784 None:intergenic 40.0%
GTAATGACAAGGTTTACAGC+TGG + Chr3:101038877-101038896 MsG0380017824.01.T01:intron 40.0%
GTAGGCTAAAAACACAACTG+TGG + Chr3:101037329-101037348 MsG0380017824.01.T01:intron 40.0%
TAACTATCGTTCAGTCCTTC+CGG - Chr3:101035832-101035851 None:intergenic 40.0%
TAAGGGTTTATCGGGAGTTT+AGG - Chr3:101036777-101036796 None:intergenic 40.0%
TACCTGAAATGTCATGTGGA+GGG + Chr3:101034445-101034464 MsG0380017824.01.T01:intron 40.0%
TACGGCCAATGGTTTACTAA+AGG + Chr3:101038136-101038155 MsG0380017824.01.T01:intron 40.0%
TCCATATGAACTTGCACACA+CGG + Chr3:101033375-101033394 MsG0380017824.01.T01:CDS 40.0%
TCGGTTATAGGGAATTTGGT+TGG + Chr3:101038204-101038223 MsG0380017824.01.T01:CDS 40.0%
TGTAGAAGCCATAGCAAGTA+CGG - Chr3:101039840-101039859 None:intergenic 40.0%
TTAACATCGAGAACAACCAC+GGG - Chr3:101038112-101038131 None:intergenic 40.0%
TTCCCATGAGATTGACAATC+GGG + Chr3:101036565-101036584 MsG0380017824.01.T01:intron 40.0%
! AGAATTAGCCTCTCATTTGG+TGG + Chr3:101037770-101037789 MsG0380017824.01.T01:intron 40.0%
! AGGATTTTATAGTAGGGGGA+AGG - Chr3:101037487-101037506 None:intergenic 40.0%
! ATGTTTTTCACATGGTCCAC+CGG + Chr3:101036490-101036509 MsG0380017824.01.T01:intron 40.0%
! CGTTTCTATTTCTCTGCTCT+CGG - Chr3:101036376-101036395 None:intergenic 40.0%
! GTCATTTAAAACTCAACCGC+TGG - Chr3:101036712-101036731 None:intergenic 40.0%
! TAGAATTTTCCGACAACGGA+CGG - Chr3:101035128-101035147 None:intergenic 40.0%
! TCGTTTTCTGACCATTAACG+AGG - Chr3:101037696-101037715 None:intergenic 40.0%
! TTTTATAGTAGGGGGAAGGT+AGG - Chr3:101037483-101037502 None:intergenic 40.0%
! TTTTCGCTCCATGGATTTCA+TGG + Chr3:101038008-101038027 MsG0380017824.01.T01:intron 40.0%
!! CGCAACTTTTGAAAGATAGG+GGG + Chr3:101034969-101034988 MsG0380017824.01.T01:intron 40.0%
!! GATTTGCTTGTGTCGTTTGT+TGG - Chr3:101037827-101037846 None:intergenic 40.0%
!! GGACAAAAAGAAGAGCATCT+TGG - Chr3:101038451-101038470 None:intergenic 40.0%
!! TCCAAAAAGGATTCTGAAGC+AGG - Chr3:101034591-101034610 None:intergenic 40.0%
!! TTTTCTCACGGTGGATTCTA+GGG - Chr3:101036539-101036558 None:intergenic 40.0%
!!! ATGGTTTTGGGAGCTATGAA+TGG - Chr3:101038055-101038074 None:intergenic 40.0%
AAATACGTTTGTACCCCCAG+CGG + Chr3:101034687-101034706 MsG0380017824.01.T01:intron 45.0%
AATGCGTAAGGTCAATCCAG+CGG + Chr3:101036693-101036712 MsG0380017824.01.T01:intron 45.0%
AATTGGATCAGGTGAGGTGA+TGG - Chr3:101036011-101036030 None:intergenic 45.0%
AATTTGGGCAGACACAAGAC+AGG + Chr3:101033328-101033347 MsG0380017824.01.T01:CDS 45.0%
AGCAAGTACGGTAACAGGAA+AGG - Chr3:101039828-101039847 None:intergenic 45.0%
ATCGTCTTCCTGCGTTGTTA+AGG + Chr3:101038343-101038362 MsG0380017824.01.T01:CDS 45.0%
CAGGCCTTAGTCAACACTAT+TGG + Chr3:101039203-101039222 MsG0380017824.01.T01:intron 45.0%
CCAGTGACATGAAGAGGAAT+AGG - Chr3:101038473-101038492 None:intergenic 45.0%
CCATATGAACTTGCACACAC+GGG + Chr3:101033376-101033395 MsG0380017824.01.T01:CDS 45.0%
CCTATTCCTCTTCATGTCAC+TGG + Chr3:101038470-101038489 MsG0380017824.01.T01:CDS 45.0%
CGTCCGGAATAGTGAAATAG+AGG - Chr3:101035533-101035552 None:intergenic 45.0%
CTTGCAATGGGATCGTTATC+TGG - Chr3:101039985-101040004 None:intergenic 45.0%
GAGATGTCGTAGGCTTGATT+AGG + Chr3:101036273-101036292 MsG0380017824.01.T01:intron 45.0%
TAGGCTTGATTAGGGAGTGA+GGG + Chr3:101036282-101036301 MsG0380017824.01.T01:intron 45.0%
TATTGCTTCGCACACATGCA+AGG - Chr3:101037507-101037526 None:intergenic 45.0%
TTCTTGTTCTTTGCAGCACC+TGG + Chr3:101038375-101038394 MsG0380017824.01.T01:CDS 45.0%
! AAGCTCTAGCAAGTTGGACT+AGG - Chr3:101033940-101033959 None:intergenic 45.0%
! ACATAAAAGAGTGCAGACGC+TGG - Chr3:101036071-101036090 None:intergenic 45.0%
! AGCTCTAGCAAGTTGGACTA+GGG - Chr3:101033939-101033958 None:intergenic 45.0%
! ATCACGATTGATTCTCTGCC+AGG - Chr3:101034754-101034773 None:intergenic 45.0%
! GATTGTGATTTTGCGCGCTT+CGG - Chr3:101035726-101035745 None:intergenic 45.0%
! GCAATTTTCATCTCAGGGCT+TGG - Chr3:101034629-101034648 None:intergenic 45.0%
! GCCTGCTTCAGAATCCTTTT+TGG + Chr3:101034587-101034606 MsG0380017824.01.T01:intron 45.0%
! GTGCACTTAAGTTTGGTTCC+TGG - Chr3:101035758-101035777 None:intergenic 45.0%
! TCCTGTTACCGTACTTGCTA+TGG + Chr3:101039829-101039848 MsG0380017824.01.T01:CDS 45.0%
! TTGGTGGCCAAGCATTACTA+TGG + Chr3:101037786-101037805 MsG0380017824.01.T01:intron 45.0%
!! AAAACTGGCCTTAACAACGC+AGG - Chr3:101038354-101038373 None:intergenic 45.0%
!! AGTATGTGGATTCTAGGGTG+AGG + Chr3:101035911-101035930 MsG0380017824.01.T01:intron 45.0%
!! CTGGCTTGGGAATCTATTGT+TGG + Chr3:101038408-101038427 MsG0380017824.01.T01:CDS 45.0%
!! CTTTTCTCACGGTGGATTCT+AGG - Chr3:101036540-101036559 None:intergenic 45.0%
!! GTATGTGGATTCTAGGGTGA+GGG + Chr3:101035912-101035931 MsG0380017824.01.T01:intron 45.0%
!!! AACTTTTTCGGACGCACACT+TGG + Chr3:101035222-101035241 MsG0380017824.01.T01:intron 45.0%
!!! ACTTTTTCGGACGCACACTT+GGG + Chr3:101035223-101035242 MsG0380017824.01.T01:intron 45.0%
!!! TTTGTTTTCAAGTGCGCGTC+CGG - Chr3:101035549-101035568 None:intergenic 45.0%
AAGCTGCAGCAGAAATGGGT+TGG + Chr3:101038232-101038251 MsG0380017824.01.T01:CDS 50.0%
AGCACAAGCTGCAGCAGAAA+TGG + Chr3:101038227-101038246 MsG0380017824.01.T01:CDS 50.0%
ATGCTTGGCCACCAAATGAG+AGG - Chr3:101037781-101037800 None:intergenic 50.0%
CACCCTCCACATGACATTTC+AGG - Chr3:101034450-101034469 None:intergenic 50.0%
CCCGTGTGTGCAAGTTCATA+TGG - Chr3:101033379-101033398 None:intergenic 50.0%
CTGCACTTAAGTGCAGTTCC+TGG + Chr3:101034733-101034752 MsG0380017824.01.T01:intron 50.0%
CTTAAGTGCAGCTGAGTCAG+CGG - Chr3:101034724-101034743 None:intergenic 50.0%
GAGATCATTCCTAACGACGG+TGG + Chr3:101038162-101038181 MsG0380017824.01.T01:CDS 50.0%
GCACAAGCTGCAGCAGAAAT+GGG + Chr3:101038228-101038247 MsG0380017824.01.T01:CDS 50.0%
GCCATAGCAAGTACGGTAAC+AGG - Chr3:101039833-101039852 None:intergenic 50.0%
GGCAGACACAAGACAGGAAT+TGG + Chr3:101033334-101033353 MsG0380017824.01.T01:CDS 50.0%
GGCCCGATTGTCAATCTCAT+GGG - Chr3:101036570-101036589 None:intergenic 50.0%
GTAGGCTTGATTAGGGAGTG+AGG + Chr3:101036281-101036300 MsG0380017824.01.T01:intron 50.0%
TGGCCCGATTGTCAATCTCA+TGG - Chr3:101036571-101036590 None:intergenic 50.0%
TTAACTGGAGTTGGAGCCAG+CGG + Chr3:101035793-101035812 MsG0380017824.01.T01:intron 50.0%
! GGTTCTAACAAGTCCCTCAC+CGG - Chr3:101036512-101036531 None:intergenic 50.0%
! TCTAGCAAGTTGGACTAGGG+AGG - Chr3:101033936-101033955 None:intergenic 50.0%
! TGCAGTACCCCACTTGTTAG+CGG - Chr3:101033404-101033423 None:intergenic 50.0%
!!! CTTTTTCGGACGCACACTTG+GGG + Chr3:101035224-101035243 MsG0380017824.01.T01:intron 50.0%
AATTGAGTGGTCCACCGGTG+AGG - Chr3:101035949-101035968 None:intergenic 55.0%
AGCATTAAGTCCCTCACCGG+TGG + Chr3:101035935-101035954 MsG0380017824.01.T01:intron 55.0%
AGCGGTCATTTAACGACCGC+TGG - Chr3:101034706-101034725 None:intergenic 55.0%
ATTGAGTGGTCCACCGGTGA+GGG - Chr3:101035948-101035967 None:intergenic 55.0%
CAGCGGTAGTTAACTGTGGC+CGG + Chr3:101035810-101035829 MsG0380017824.01.T01:intron 55.0%
CGGTCATTTAACGACCGCTG+GGG - Chr3:101034704-101034723 None:intergenic 55.0%
GAGCCAGCGGTAGTTAACTG+TGG + Chr3:101035806-101035825 MsG0380017824.01.T01:intron 55.0%
GCGGTCATTTAACGACCGCT+GGG - Chr3:101034705-101034724 None:intergenic 55.0%
GCTTGATTAGGGAGTGAGGG+AGG + Chr3:101036285-101036304 MsG0380017824.01.T01:intron 55.0%
GGCGAAATTGAGTGGTCCAC+CGG - Chr3:101035954-101035973 None:intergenic 55.0%
GGTAGTTAACTGTGGCCGGA+AGG + Chr3:101035814-101035833 MsG0380017824.01.T01:intron 55.0%
GGTCATTTAACGACCGCTGG+GGG - Chr3:101034703-101034722 None:intergenic 55.0%
GTGACTGCGTGATTACGCGA+CGG + Chr3:101036736-101036755 MsG0380017824.01.T01:intron 55.0%
GTTCTTTGCAGCACCTGGTG+TGG + Chr3:101038380-101038399 MsG0380017824.01.T01:CDS 55.0%
TACGCGACGGCAGTCAATCA+CGG + Chr3:101036749-101036768 MsG0380017824.01.T01:intron 55.0%
TAGGGAGTGAGGGAGGAAGA+TGG + Chr3:101036292-101036311 MsG0380017824.01.T01:intron 55.0%
TCTAACAAGTCCCTCACCGG+TGG - Chr3:101036509-101036528 None:intergenic 55.0%
TTCACATGGTCCACCGGTGA+GGG + Chr3:101036496-101036515 MsG0380017824.01.T01:intron 55.0%
TTTCACATGGTCCACCGGTG+AGG + Chr3:101036495-101036514 MsG0380017824.01.T01:intron 55.0%
! GACGCGAAGCTCTAGCAAGT+TGG - Chr3:101033946-101033965 None:intergenic 55.0%
! GCAAGTTGGACTAGGGAGGT+TGG - Chr3:101033932-101033951 None:intergenic 55.0%
!! CACGGTGGATTCTAGGGTGA+GGG - Chr3:101036533-101036552 None:intergenic 55.0%
!! GGGAGCATTAAGTCCCTCAC+CGG + Chr3:101035932-101035951 MsG0380017824.01.T01:intron 55.0%
!! TCACGGTGGATTCTAGGGTG+AGG - Chr3:101036534-101036553 None:intergenic 55.0%
!! TGGTGTGGCTAGTCTGGCTT+GGG + Chr3:101038395-101038414 MsG0380017824.01.T01:CDS 55.0%
AAGGTAGGACTGCAAGCGGG+TGG - Chr3:101037468-101037487 None:intergenic 60.0%
ACACGGGCTCCGCTAACAAG+TGG + Chr3:101033392-101033411 MsG0380017824.01.T01:CDS 60.0%
ACGGGCTCCGCTAACAAGTG+GGG + Chr3:101033394-101033413 MsG0380017824.01.T01:CDS 60.0%
CACGGGCTCCGCTAACAAGT+GGG + Chr3:101033393-101033412 MsG0380017824.01.T01:CDS 60.0%
CGGCCACAGTTAACTACCGC+TGG - Chr3:101035812-101035831 None:intergenic 60.0%
GGGAAGGTAGGACTGCAAGC+GGG - Chr3:101037471-101037490 None:intergenic 60.0%
GGGGAAGGTAGGACTGCAAG+CGG - Chr3:101037472-101037491 None:intergenic 60.0%
GTGGATTCGCCACCGTCGTT+AGG - Chr3:101038174-101038193 None:intergenic 60.0%
! AGCACCTGGTGTGGCTAGTC+TGG + Chr3:101038389-101038408 MsG0380017824.01.T01:CDS 60.0%
! CAAGCCAGACTAGCCACACC+AGG - Chr3:101038396-101038415 None:intergenic 60.0%
! GTGGGTTTTCACGGTTCCCG+TGG + Chr3:101038093-101038112 MsG0380017824.01.T01:intron 60.0%
!! AGTGGGGTACTGCAGTCTGC+AGG + Chr3:101033410-101033429 MsG0380017824.01.T01:CDS 60.0%
!! CTGGTGTGGCTAGTCTGGCT+TGG + Chr3:101038394-101038413 MsG0380017824.01.T01:CDS 60.0%
TGCAAGCGGGTGGACGCAAG+TGG - Chr3:101037458-101037477 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 101033301 101040020 101033301 ID=MsG0380017824.01;Name=MsG0380017824.01
Chr3 mRNA 101033301 101040020 101033301 ID=MsG0380017824.01.T01;Parent=MsG0380017824.01;Name=MsG0380017824.01.T01;_AED=0.35;_eAED=0.36;_QI=0|0|0|0.66|1|1|3|0|244
Chr3 exon 101033301 101033443 101033301 ID=MsG0380017824.01.T01:exon:2844;Parent=MsG0380017824.01.T01
Chr3 exon 101038158 101038491 101038158 ID=MsG0380017824.01.T01:exon:2845;Parent=MsG0380017824.01.T01
Chr3 exon 101039763 101040020 101039763 ID=MsG0380017824.01.T01:exon:2846;Parent=MsG0380017824.01.T01
Chr3 CDS 101033301 101033443 101033301 ID=MsG0380017824.01.T01:cds;Parent=MsG0380017824.01.T01
Chr3 CDS 101038158 101038491 101038158 ID=MsG0380017824.01.T01:cds;Parent=MsG0380017824.01.T01
Chr3 CDS 101039763 101040020 101039763 ID=MsG0380017824.01.T01:cds;Parent=MsG0380017824.01.T01
Gene Sequence

>MsG0380017824.01.T01

ATGGAGAGGTCAACACTGGAGATGCAAAATTTGGGCAGACACAAGACAGGAATTGGAAATGCTTCTGTTTGTCGTCCATATGAACTTGCACACACGGGCTCCGCTAACAAGTGGGGTACTGCAGTCTGCAGGACTGAGAACGTGGAAGAGATCATTCCTAACGACGGTGGCGAATCCACGAGTCATTTATCGGTTATAGGGAATTTGGTTGGAGCACAAGCTGCAGCAGAAATGGGTTGGAAAGAAAGTGCTGTGTGTTTGTTTTCATTAGGGATGGTGCATTATTTGGTGTTGTTTGTGACACTTTATCAAAGGTTGTCTGGTGGTGATCGTCTTCCTGCGTTGTTAAGGCCAGTTTTCTTCTTGTTCTTTGCAGCACCTGGTGTGGCTAGTCTGGCTTGGGAATCTATTGTTGGAGATTTTGATACTCTTTCCAAGATGCTCTTCTTTTTGTCCCTATTCCTCTTCATGTCACTGGTTTGCAGGCCAGCCCTATTCAAGAGATCTATGAGAAGGTTTAATGTTGTGGTGGGCATACTCCTTTCCTGTTACCGTACTTGCTATGGCTTCTACAATTATGCACAACAAGTCAAAGGAACTGTTTCCCATATTCTAATGCTCATTCTCTTGGCACTTTCTGTTCTTGTCTCTGTTTCTCTCACATTGTTCACTTTGCTCAACTCTAAGATGCTTCTACCAGATAACGATCCCATTGCAAGCATCCTCATTGTTTAA

Protein sequence

>MsG0380017824.01.T01

MERSTLEMQNLGRHKTGIGNASVCRPYELAHTGSANKWGTAVCRTENVEEIIPNDGGESTSHLSVIGNLVGAQAAAEMGWKESAVCLFSLGMVHYLVLFVTLYQRLSGGDRLPALLRPVFFLFFAAPGVASLAWESIVGDFDTLSKMLFFLSLFLFMSLVCRPALFKRSMRRFNVVVGILLSCYRTCYGFYNYAQQVKGTVSHILMLILLALSVLVSVSLTLFTLLNSKMLLPDNDPIASILIV*