AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017285.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017285.01.T01 MTR_3g104600 98.251 343 6 0 1 343 1 343 0.0 696
MsG0380017285.01.T01 MTR_6g091800 54.747 316 136 3 21 336 5 313 3.22e-123 357
MsG0380017285.01.T01 MTR_6g091800 51.940 335 140 3 21 336 5 337 3.03e-120 350
MsG0380017285.01.T01 MTR_6g091800 51.290 310 130 3 21 311 5 312 3.63e-108 318
MsG0380017285.01.T01 MTR_6g091800 49.367 316 112 3 21 336 5 272 2.38e-103 305
MsG0380017285.01.T01 MTR_6g091800 46.866 335 116 3 21 336 5 296 3.21e-100 298
MsG0380017285.01.T01 MTR_6g034145 54.373 263 113 3 74 336 4 259 3.21e-99 294
MsG0380017285.01.T01 MTR_6g034145 31.210 157 95 4 194 340 10 163 1.16e-13 70.5
MsG0380017285.01.T01 MTR_6g091800 56.855 248 102 2 21 268 5 247 6.93e-99 293
MsG0380017285.01.T01 MTR_6g091800 53.184 267 106 2 21 268 5 271 5.69e-96 286
MsG0380017285.01.T01 MTR_6g092210 50.951 263 116 3 74 336 4 253 1.32e-92 277
MsG0380017285.01.T01 MTR_5g009500 38.272 324 156 8 33 331 36 340 2.80e-65 210
MsG0380017285.01.T01 MTR_6g091910 47.964 221 102 5 116 336 8 215 4.72e-64 202
MsG0380017285.01.T01 MTR_6g091910 28.205 234 126 5 21 235 5 215 4.41e-20 87.8
MsG0380017285.01.T01 MTR_6g091800 53.514 185 81 2 21 205 5 184 1.89e-63 200
MsG0380017285.01.T01 MTR_6g091800 28.856 201 111 6 116 306 8 186 5.17e-13 67.4
MsG0380017285.01.T01 MTR_8g027975 35.180 361 182 11 3 331 15 355 1.08e-60 199
MsG0380017285.01.T01 MTR_6g091800 49.020 204 85 2 21 205 5 208 2.10e-60 193
MsG0380017285.01.T01 MTR_7g064980 33.856 319 164 10 32 329 22 314 1.53e-47 163
MsG0380017285.01.T01 MTR_7g064980 26.360 239 142 10 116 341 11 228 8.97e-12 65.5
MsG0380017285.01.T01 MTR_8g096050 32.131 305 172 8 35 331 227 504 4.37e-46 164
MsG0380017285.01.T01 MTR_1g012030 32.237 304 171 8 32 329 136 410 8.97e-45 159
MsG0380017285.01.T01 MTR_1g012030 28.972 214 131 4 14 227 215 407 1.43e-19 89.4
MsG0380017285.01.T01 MTR_7g084400 32.131 305 169 7 35 331 213 487 9.77e-45 160
MsG0380017285.01.T01 MTR_3g098460 31.169 308 175 8 33 331 203 482 1.01e-42 154
MsG0380017285.01.T01 MTR_3g098460 27.184 206 122 5 35 233 299 483 3.89e-16 79.7
MsG0380017285.01.T01 MTR_3g107510 31.023 303 176 7 32 329 119 393 8.75e-42 150
MsG0380017285.01.T01 MTR_3g107510 30.841 214 127 3 14 227 198 390 2.45e-21 94.4
MsG0380017285.01.T01 MTR_2g436930 27.914 326 184 6 37 329 17 324 3.25e-41 147
MsG0380017285.01.T01 MTR_2g436930 26.570 207 134 5 129 328 13 208 3.38e-16 78.6
MsG0380017285.01.T01 MTR_5g081150 33.123 317 169 8 32 330 31 322 1.42e-40 145
MsG0380017285.01.T01 MTR_5g081150 30.374 214 130 3 19 232 129 323 3.42e-16 78.6
MsG0380017285.01.T01 MTR_4g114320 30.368 326 190 9 11 329 99 394 3.17e-40 146
MsG0380017285.01.T01 MTR_3g104500 31.157 337 189 10 14 331 11 323 1.88e-39 142
MsG0380017285.01.T01 MTR_4g119770 27.576 330 182 7 37 329 16 325 2.09e-38 139
MsG0380017285.01.T01 MTR_4g119770 28.571 210 128 7 129 328 12 209 4.92e-18 84.0
MsG0380017285.01.T01 MTR_7g068340 29.617 287 165 4 46 326 98 353 4.49e-36 134
MsG0380017285.01.T01 MTR_7g068340 28.000 150 96 3 194 342 138 276 2.43e-15 76.6
MsG0380017285.01.T01 MTR_4g016730 31.667 300 147 9 46 330 100 356 1.91e-35 132
MsG0380017285.01.T01 MTR_2g436930 28.685 251 142 4 98 329 2 234 1.98e-31 119
MsG0380017285.01.T01 MTR_2g436930 24.873 197 133 5 36 224 39 228 9.86e-12 64.7
MsG0380017285.01.T01 MTR_4g005330 27.327 333 184 11 32 340 63 361 9.57e-30 117
MsG0380017285.01.T01 MTR_3g028590 30.769 312 176 11 31 326 93 380 5.43e-29 115
MsG0380017285.01.T01 MTR_3g028590 30.769 312 176 11 31 326 89 376 5.97e-29 115
MsG0380017285.01.T01 MTR_8g107270 31.186 295 160 11 33 309 16 285 1.62e-28 112
MsG0380017285.01.T01 MTR_4g005330 27.052 329 182 11 36 340 1 295 2.73e-28 112
MsG0380017285.01.T01 MTR_7g109135 26.316 304 192 8 37 329 24 306 9.10e-28 110
MsG0380017285.01.T01 MTR_8g090210 28.000 325 175 9 33 331 108 399 2.57e-26 108
MsG0380017285.01.T01 MTR_8g036880 30.547 311 179 9 31 326 98 386 2.71e-26 108
MsG0380017285.01.T01 MTR_2g098070 30.476 315 179 11 31 329 62 352 3.30e-26 107
MsG0380017285.01.T01 MTR_4g119770 27.273 264 140 6 37 268 16 259 4.08e-25 102
MsG0380017285.01.T01 MTR_4g119770 28.571 210 128 7 129 328 12 209 1.78e-18 84.3
MsG0380017285.01.T01 MTR_1g087840 27.027 296 180 11 47 329 31 303 4.67e-25 103
MsG0380017285.01.T01 MTR_1g087840 27.957 186 116 5 147 330 35 204 1.90e-12 67.4
MsG0380017285.01.T01 MTR_7g109135 25.658 304 187 8 37 329 24 299 7.21e-25 102
MsG0380017285.01.T01 MTR_4g078545 29.524 315 176 11 31 326 71 358 4.83e-24 101
MsG0380017285.01.T01 MTR_5g081150 31.092 238 129 5 32 254 31 248 6.79e-24 99.0
MsG0380017285.01.T01 MTR_5g081150 27.143 210 124 6 130 329 33 223 4.83e-12 65.5
MsG0380017285.01.T01 MTR_7g084400 32.487 197 108 5 35 227 207 382 7.84e-24 101
MsG0380017285.01.T01 MTR_7g084400 29.703 202 110 6 131 326 207 382 1.86e-15 77.4
MsG0380017285.01.T01 MTR_5g081150 31.799 239 126 6 32 254 31 248 1.05e-23 98.6
MsG0380017285.01.T01 MTR_5g081150 27.143 210 124 6 130 329 33 223 5.58e-12 65.5
MsG0380017285.01.T01 MTR_4g012850 28.188 298 184 8 33 324 14 287 2.50e-23 98.6
MsG0380017285.01.T01 MTR_5g055410 26.014 296 183 8 47 329 33 305 2.61e-23 99.4
MsG0380017285.01.T01 MTR_3g074490 26.346 353 205 9 2 331 85 405 4.49e-23 99.4
MsG0380017285.01.T01 MTR_5g081910 28.374 289 184 8 51 319 24 309 4.02e-22 95.9
MsG0380017285.01.T01 MTR_8g066975 28.105 306 198 7 33 330 6 297 4.28e-22 95.1
MsG0380017285.01.T01 MTR_7g109135 26.506 249 156 8 87 329 1 228 5.25e-21 90.9
MsG0380017285.01.T01 MTR_5g030530 27.124 306 201 7 33 330 6 297 3.62e-20 89.7
MsG0380017285.01.T01 MTR_3g025800 25.378 331 217 8 16 326 8 328 3.45e-18 84.7
MsG0380017285.01.T01 MTR_5g081910 27.941 204 137 4 130 325 40 241 5.41e-17 80.1
MsG0380017285.01.T01 MTR_7g109135 29.078 141 88 4 195 329 73 207 7.16e-17 79.0
MsG0380017285.01.T01 MTR_7g117030 27.509 269 169 10 70 326 78 332 9.81e-17 80.5
MsG0380017285.01.T01 MTR_8g098240 23.607 305 188 7 36 331 321 589 3.08e-16 80.1
MsG0380017285.01.T01 MTR_4g018750 24.172 302 197 6 37 328 17 296 9.58e-16 77.0
MsG0380017285.01.T01 MTR_1g097890 24.062 320 196 8 20 335 36 312 1.96e-15 76.3
MsG0380017285.01.T01 MTR_8g076760 23.368 291 184 9 51 323 30 299 2.03e-15 76.3
MsG0380017285.01.T01 MTR_2g102010 25.667 300 190 10 33 324 15 289 8.41e-15 74.3
MsG0380017285.01.T01 MTR_3g090820 26.007 273 179 8 66 326 123 384 1.35e-14 74.7
MsG0380017285.01.T01 MTR_1g090330 21.290 310 209 9 34 331 13 299 3.25e-14 72.8
MsG0380017285.01.T01 MTR_6g034515 26.882 279 159 8 51 318 83 327 3.29e-14 73.2
MsG0380017285.01.T01 MTR_6g034515 25.366 205 131 3 36 236 161 347 1.35e-13 71.2
MsG0380017285.01.T01 MTR_8g092080 24.116 311 191 8 21 329 38 305 8.66e-14 71.6
MsG0380017285.01.T01 MTR_5g073040 26.452 310 187 8 31 329 35 314 9.28e-14 71.6
MsG0380017285.01.T01 MTR_4g018750 24.164 269 172 6 37 295 17 263 4.85e-13 68.9
MsG0380017285.01.T01 MTR_3g462140 22.330 309 203 9 31 326 11 295 1.28e-12 67.8
MsG0380017285.01.T01 MTR_1g088995 22.222 324 223 7 13 331 10 309 1.31e-12 68.2
MsG0380017285.01.T01 MTR_7g066690 22.581 310 206 8 31 329 13 299 3.37e-12 66.6
MsG0380017285.01.T01 MTR_4g088545 22.830 311 210 6 33 331 10 302 3.66e-12 66.6
MsG0380017285.01.T01 MTR_2g032610 24.150 294 185 8 51 327 45 317 6.65e-12 65.9
MsG0380017285.01.T01 MTR_4g057850 25.633 316 195 14 21 323 9 297 6.90e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017285.01.T01 AT1G14560 64.118 340 109 3 1 338 1 329 7.84e-147 417
MsG0380017285.01.T01 AT1G14560 64.856 313 97 3 1 311 1 302 1.46e-132 380
MsG0380017285.01.T01 AT4G26180 55.732 314 133 3 26 339 12 319 2.96e-126 365
MsG0380017285.01.T01 AT4G26180 55.944 286 120 3 26 311 12 291 1.00e-113 332
MsG0380017285.01.T01 AT1G14560 65.812 234 75 2 107 338 1 231 4.44e-110 320
MsG0380017285.01.T01 AT4G01100 36.697 327 159 8 33 331 40 346 1.84e-60 198
MsG0380017285.01.T01 AT4G01100 34.503 342 160 8 33 331 40 360 3.65e-57 189
MsG0380017285.01.T01 AT4G01100 35.556 315 157 7 44 331 1 296 4.39e-56 185
MsG0380017285.01.T01 AT4G01100 27.363 201 130 6 37 227 97 291 7.38e-15 74.7
MsG0380017285.01.T01 AT2G37890 33.125 320 171 9 33 334 43 337 4.09e-49 168
MsG0380017285.01.T01 AT2G37890 29.949 197 121 4 32 227 149 329 8.33e-21 92.0
MsG0380017285.01.T01 AT2G37890 29.870 231 133 9 121 341 35 246 1.55e-14 73.9
MsG0380017285.01.T01 AT3G53940 33.333 321 171 9 32 334 70 365 8.78e-49 168
MsG0380017285.01.T01 AT3G55640 32.797 311 172 8 34 329 37 325 1.10e-47 164
MsG0380017285.01.T01 AT3G55640 32.797 311 172 8 34 329 37 325 1.10e-47 164
MsG0380017285.01.T01 AT5G61810 30.921 304 163 7 33 326 63 329 7.27e-42 149
MsG0380017285.01.T01 AT5G61810 26.768 198 122 3 35 230 156 332 3.96e-15 75.9
MsG0380017285.01.T01 AT4G32400 32.131 305 170 8 32 329 111 385 3.69e-41 148
MsG0380017285.01.T01 AT4G32400 27.830 212 134 3 26 237 200 392 3.94e-17 82.0
MsG0380017285.01.T01 AT3G21390 29.091 330 177 7 37 329 21 330 5.24e-41 146
MsG0380017285.01.T01 AT3G21390 29.469 207 126 5 129 328 17 210 1.11e-19 89.0
MsG0380017285.01.T01 AT5G48970 27.964 329 183 6 37 329 24 334 5.73e-41 146
MsG0380017285.01.T01 AT5G48970 27.273 209 132 5 129 329 20 216 4.90e-18 84.3
MsG0380017285.01.T01 AT3G21390 29.091 330 177 7 37 329 43 352 7.04e-41 147
MsG0380017285.01.T01 AT3G21390 29.469 207 126 5 129 328 39 232 1.45e-19 89.0
MsG0380017285.01.T01 AT5G51050 29.236 301 179 5 35 329 223 495 8.15e-41 149
MsG0380017285.01.T01 AT5G61810 30.744 309 167 7 33 331 206 477 8.92e-41 149
MsG0380017285.01.T01 AT3G51870 30.743 296 168 4 46 335 102 366 1.68e-39 144
MsG0380017285.01.T01 AT3G51870 27.638 199 120 5 145 342 105 280 4.05e-14 73.2
MsG0380017285.01.T01 AT5G48970 29.181 281 159 5 71 329 1 263 2.18e-37 135
MsG0380017285.01.T01 AT5G56450 30.380 316 183 7 31 329 30 325 2.40e-37 137
MsG0380017285.01.T01 AT5G07320 29.452 292 161 8 44 326 218 473 4.11e-37 139
MsG0380017285.01.T01 AT5G07320 32.673 202 105 7 35 230 300 476 2.52e-17 83.2
MsG0380017285.01.T01 AT5G01500 30.795 302 166 6 46 338 130 397 1.78e-36 136
MsG0380017285.01.T01 AT5G01500 28.426 197 119 4 144 339 132 307 2.02e-15 77.4
MsG0380017285.01.T01 AT3G55640 31.624 234 129 5 34 254 37 252 1.76e-31 119
MsG0380017285.01.T01 AT3G55640 26.577 222 134 6 130 341 37 239 7.47e-15 73.9
MsG0380017285.01.T01 AT3G55640 31.624 234 129 5 34 254 37 252 1.76e-31 119
MsG0380017285.01.T01 AT3G55640 26.577 222 134 6 130 341 37 239 7.47e-15 73.9
MsG0380017285.01.T01 AT3G53940 33.054 239 123 7 32 254 70 287 3.14e-31 119
MsG0380017285.01.T01 AT3G53940 30.493 223 126 8 131 343 73 276 6.94e-16 77.4
MsG0380017285.01.T01 AT3G20240 26.814 317 179 8 33 326 50 336 4.82e-31 120
MsG0380017285.01.T01 AT2G47490 29.085 306 178 11 47 337 29 310 1.84e-29 115
MsG0380017285.01.T01 AT2G47490 29.897 194 119 5 138 330 24 201 2.25e-12 67.4
MsG0380017285.01.T01 AT1G25380 28.053 303 181 10 47 334 33 313 7.80e-27 109
MsG0380017285.01.T01 AT1G25380 28.053 303 181 10 47 334 33 313 7.80e-27 109
MsG0380017285.01.T01 AT5G13490 30.619 307 178 10 34 326 87 372 8.38e-27 109
MsG0380017285.01.T01 AT5G13490 30.619 307 178 10 34 326 87 372 8.38e-27 109
MsG0380017285.01.T01 AT4G28390 30.968 310 178 11 31 326 79 366 1.20e-26 108
MsG0380017285.01.T01 AT4G28390 30.968 310 178 11 31 326 79 366 1.20e-26 108
MsG0380017285.01.T01 AT5G64970 28.308 325 174 11 33 331 133 424 2.38e-26 108
MsG0380017285.01.T01 AT5G17400 30.503 318 167 12 31 325 10 296 3.67e-26 106
MsG0380017285.01.T01 AT3G08580 29.808 312 180 10 31 326 80 368 5.09e-26 107
MsG0380017285.01.T01 AT3G08580 29.808 312 180 10 31 326 80 368 5.09e-26 107
MsG0380017285.01.T01 AT5G64970 27.500 320 173 11 38 331 14 300 7.71e-24 100
MsG0380017285.01.T01 AT4G11440 29.114 316 185 10 39 343 330 617 6.67e-23 100
MsG0380017285.01.T01 AT4G11440 29.114 316 185 10 39 343 330 617 6.67e-23 100
MsG0380017285.01.T01 AT1G78180 28.528 326 172 11 33 331 126 417 1.84e-22 97.8
MsG0380017285.01.T01 AT5G66380 25.552 317 200 9 37 337 12 308 7.23e-20 89.0
MsG0380017285.01.T01 AT5G64970 27.090 299 159 11 32 304 132 397 4.97e-19 87.8
MsG0380017285.01.T01 AT5G58970 25.325 308 194 9 31 326 12 295 6.76e-19 86.3
MsG0380017285.01.T01 AT5G46800 27.124 306 204 7 33 330 6 300 1.84e-18 84.7
MsG0380017285.01.T01 AT5G46800 27.124 306 204 7 33 330 6 300 1.84e-18 84.7
MsG0380017285.01.T01 AT5G46800 27.124 306 204 7 33 330 6 300 1.84e-18 84.7
MsG0380017285.01.T01 AT1G14140 24.104 307 203 8 35 331 16 302 2.31e-18 84.7
MsG0380017285.01.T01 AT1G74240 25.444 338 228 7 2 326 7 333 2.41e-18 85.5
MsG0380017285.01.T01 AT2G39970 26.780 295 183 9 51 319 24 311 1.36e-15 77.0
MsG0380017285.01.T01 AT4G03115 22.222 324 215 7 15 331 18 311 6.29e-15 75.1
MsG0380017285.01.T01 AT2G30160 25.407 307 190 8 35 329 42 321 7.85e-15 74.7
MsG0380017285.01.T01 AT4G39460 25.672 335 195 10 1 329 25 311 8.21e-15 74.7
MsG0380017285.01.T01 AT4G39460 25.672 335 195 10 1 329 25 311 8.21e-15 74.7
MsG0380017285.01.T01 AT4G39460 25.672 335 195 10 1 329 25 311 8.21e-15 74.7
MsG0380017285.01.T01 AT4G03115 22.222 324 215 7 15 331 50 343 9.13e-15 74.7
MsG0380017285.01.T01 AT1G74240 26.316 266 179 4 71 326 27 285 1.12e-14 74.3
MsG0380017285.01.T01 AT1G79900 26.071 280 168 9 51 324 32 278 1.18e-14 73.9
MsG0380017285.01.T01 AT2G33820 24.204 314 206 8 31 331 14 308 1.96e-14 73.6
MsG0380017285.01.T01 AT1G34065 24.611 321 191 10 19 335 68 341 5.17e-14 72.4
MsG0380017285.01.T01 AT1G34065 26.794 209 124 5 32 237 160 342 6.54e-12 66.2
MsG0380017285.01.T01 AT1G34065 24.611 321 191 10 19 335 61 334 5.31e-14 72.4
MsG0380017285.01.T01 AT1G34065 26.794 209 124 5 32 237 153 335 6.12e-12 66.2
MsG0380017285.01.T01 AT5G42130 24.312 218 143 3 23 236 200 399 1.89e-13 71.2
MsG0380017285.01.T01 AT5G42130 27.143 280 172 7 48 322 131 383 1.81e-11 65.1
MsG0380017285.01.T01 AT4G27940 24.910 277 176 9 66 326 144 404 3.92e-13 70.5
MsG0380017285.01.T01 AT4G03115 28.804 184 104 4 144 326 51 208 4.08e-13 68.6
MsG0380017285.01.T01 AT4G03115 22.692 260 166 6 77 331 11 240 4.58e-13 68.6
MsG0380017285.01.T01 AT4G03115 28.877 187 106 4 144 329 51 211 4.79e-13 68.2
MsG0380017285.01.T01 AT1G07030 24.490 196 123 3 131 326 40 210 6.26e-13 69.3
MsG0380017285.01.T01 AT1G07030 25.081 307 188 8 35 329 40 316 9.84e-12 65.5
MsG0380017285.01.T01 AT4G03115 22.692 260 166 6 77 331 19 248 6.44e-13 68.2
MsG0380017285.01.T01 AT1G72820 24.013 304 180 7 57 326 49 335 1.12e-12 68.6
MsG0380017285.01.T01 AT1G72820 24.013 304 180 7 57 326 49 335 1.12e-12 68.6
MsG0380017285.01.T01 AT2G33820 23.602 322 206 9 31 331 14 316 6.75e-12 65.9
MsG0380017285.01.T01 AT3G54110 22.330 309 204 9 33 329 13 297 1.90e-11 64.7
MsG0380017285.01.T01 AT2G46320 24.528 265 164 9 77 326 109 352 4.65e-11 63.9

Find 129 sgRNAs with CRISPR-Local

Find 336 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACTGTAAGTTTATATTATT+TGG 0.113461 3:-94471777 MsG0380017285.01.T01:three_prime_UTR
TTTCAAAACGGTGGCGTTTA+AGG 0.129499 3:+94476444 None:intergenic
ACGAACTCCAGCTTCTTTAT+AGG 0.187276 3:+94474031 None:intergenic
TCATCAGGTCCAACCCTTAC+TGG 0.241628 3:-94473563 MsG0380017285.01.T01:intron
CCGTACCAAACTTGCTTATC+AGG 0.253158 3:-94474696 MsG0380017285.01.T01:intron
GGAGCTCTTGCTGGATTGTT+TGG 0.263281 3:-94473440 MsG0380017285.01.T01:CDS
CTTTCTTGTGGAGCTCTTGC+TGG 0.277059 3:-94473449 MsG0380017285.01.T01:CDS
ACTGTAAGTTTATATTATTT+GGG 0.278234 3:-94471776 MsG0380017285.01.T01:three_prime_UTR
ATGCATGGTATTTGCTTGTT+TGG 0.303656 3:-94471716 MsG0380017285.01.T01:three_prime_UTR
TTAATTGCTGGTGGATTTGC+TGG 0.304100 3:-94476129 MsG0380017285.01.T01:CDS
ATGGACTTCTGATGTTCTTC+AGG 0.313245 3:+94473482 None:intergenic
TCTCTTTCTCTAGAAGTAGA+TGG 0.315440 3:-94476323 MsG0380017285.01.T01:five_prime_UTR
TTTGGTACGGGCAAGATCTA+AGG 0.328897 3:+94474709 None:intergenic
GGGTGGAGGCAGTTGTTTGC+AGG 0.333389 3:-94473287 MsG0380017285.01.T01:CDS
CTTTACCTGATAAGCAAGTT+TGG 0.338336 3:+94474691 None:intergenic
CCTGTACATAATGGCATTAA+AGG 0.342412 3:-94474068 MsG0380017285.01.T01:CDS
TTCAAAACGGTGGCGTTTAA+GGG 0.354856 3:+94476445 None:intergenic
AAGTCTCGATCAGTTTCTTC+AGG 0.364975 3:-94472158 MsG0380017285.01.T01:CDS
GAGCTCTTGCTGGATTGTTT+GGG 0.366817 3:-94473439 MsG0380017285.01.T01:CDS
CTAACATGGGATAATTGTTC+AGG 0.368987 3:+94474801 None:intergenic
AGATTCTAGATTGGCTGGTT+TGG 0.369557 3:-94476217 MsG0380017285.01.T01:CDS
ATTAACTCCTTAACATAAAC+AGG 0.374841 3:+94476147 None:intergenic
ACCATCTTTGATACATCCTT+TGG 0.378479 3:+94474121 None:intergenic
TTAGCAACTTATTCATAGAT+TGG 0.379708 3:+94475020 None:intergenic
AGCCTGCAAAATGGAGCTAA+TGG 0.389932 3:-94473365 MsG0380017285.01.T01:CDS
CTGAACAATTATCCCATGTT+AGG 0.395653 3:-94474800 MsG0380017285.01.T01:CDS
ACCGGTGGATTTCACAATCT+TGG 0.398389 3:-94475049 MsG0380017285.01.T01:CDS
AGGAAGATTGTTCGAAATCA+AGG 0.399175 3:-94473308 MsG0380017285.01.T01:CDS
TTCTGTTGCGCCTCTCGAAC+GGG 0.399548 3:-94476091 MsG0380017285.01.T01:CDS
TCGCGTTCCTGTTTATGTTA+AGG 0.399683 3:-94476154 MsG0380017285.01.T01:CDS
GGCGTTTAAGGGAGGAGAAC+GGG 0.403498 3:+94476456 None:intergenic
GAGCTTCAAAGTGGATAGAT+TGG 0.403936 3:-94476285 MsG0380017285.01.T01:five_prime_UTR
TTCATTATTTCTTAATCCTT+AGG 0.412799 3:-94471938 MsG0380017285.01.T01:three_prime_UTR
TTCTTCTCAAGATTCTAGAT+TGG 0.413816 3:-94476226 MsG0380017285.01.T01:CDS
ACTGGAATTCTTCCATATGC+TGG 0.417730 3:-94473545 MsG0380017285.01.T01:CDS
GCGTAAGCATTAACTACATA+AGG 0.418832 3:-94473265 MsG0380017285.01.T01:CDS
AAAACCAAAGTTAGGAGAAC+GGG 0.420668 3:-94476501 MsG0380017285.01.T01:five_prime_UTR
TCTCAAGATTCTAGATTGGC+TGG 0.421380 3:-94476222 MsG0380017285.01.T01:CDS
TTCACTAGGATTAATATGTC+AGG 0.426068 3:-94471866 MsG0380017285.01.T01:three_prime_UTR
GCAGACTTTAACATACCCTT+TGG 0.432131 3:-94473417 MsG0380017285.01.T01:CDS
GAAACCCGTTCTCCTAACTT+TGG 0.438276 3:+94476497 None:intergenic
TTGTGAAGTGTGATATCATT+TGG 0.440521 3:-94471982 MsG0380017285.01.T01:three_prime_UTR
TAGAACTTTAAACCAGCATA+TGG 0.441645 3:+94473533 None:intergenic
CTAAACCTAAAACCAAAGTT+AGG 0.445890 3:-94476509 MsG0380017285.01.T01:five_prime_UTR
TATGTTAAGGAGTTAATTGC+TGG 0.446548 3:-94476141 MsG0380017285.01.T01:CDS
AAAATACATTTGATGGGCTT+AGG 0.448754 3:-94473328 MsG0380017285.01.T01:CDS
AAGGGAGGAGAACGGGTTGG+AGG 0.451472 3:+94476463 None:intergenic
GAACGGCGTATACTCAGAAT+TGG 0.456634 3:+94476344 None:intergenic
TTAAGAGACAAATGCAGGTT+GGG 0.457586 3:-94473388 MsG0380017285.01.T01:CDS
GGAGTTCGTGGGCTTTATAG+AGG 0.472787 3:-94474017 MsG0380017285.01.T01:CDS
CTTCTGTTGCGCCTCTCGAA+CGG 0.475440 3:-94476092 MsG0380017285.01.T01:CDS
CAGGTTGGGAGCCTGCAAAA+TGG 0.475469 3:-94473374 MsG0380017285.01.T01:CDS
ATTCTGATGCGCCTTTCTTG+TGG 0.483627 3:-94473461 MsG0380017285.01.T01:CDS
CATATGAGCGGTATAAAAGT+TGG 0.484712 3:-94474826 MsG0380017285.01.T01:CDS
CTCTTTCTCTAGAAGTAGAT+GGG 0.486617 3:-94476322 MsG0380017285.01.T01:five_prime_UTR
TGTGGTGGTTGCAGAGGTAA+TGG 0.490076 3:-94474896 MsG0380017285.01.T01:intron
AATTATCCCATGTTAGGAAC+GGG 0.491656 3:-94474794 MsG0380017285.01.T01:CDS
CCTGATAAGCAAGTTTGGTA+CGG 0.500536 3:+94474696 None:intergenic
CAGCAAGAGCTCCACAAGAA+AGG 0.502227 3:+94473450 None:intergenic
TGCATTCTAATTAGGCGCAC+AGG 0.502541 3:-94471824 MsG0380017285.01.T01:three_prime_UTR
TATAAAGAAGCTGGAGTTCG+TGG 0.504107 3:-94474029 MsG0380017285.01.T01:CDS
CCTGTAGGTCCTGTACATAA+TGG 0.505706 3:-94474077 MsG0380017285.01.T01:CDS
GTAATGGAGCTAGTGTTATC+CGG 0.505957 3:-94474880 MsG0380017285.01.T01:CDS
CTGATAAGCAAGTTTGGTAC+GGG 0.509585 3:+94474697 None:intergenic
CGTAAGCATTAACTACATAA+GGG 0.510324 3:-94473264 MsG0380017285.01.T01:intron
TCGAACGGGTTAAGATACTT+TGG 0.511447 3:-94476077 MsG0380017285.01.T01:CDS
CATATGGAAGAATTCCAGTA+AGG 0.512544 3:+94473549 None:intergenic
TATATTATTTGGGGAATGCA+AGG 0.513028 3:-94471766 MsG0380017285.01.T01:three_prime_UTR
CCTTTAATGCCATTATGTAC+AGG 0.518203 3:+94474068 None:intergenic
GTCTCTTAACAACATCCAAA+GGG 0.520837 3:+94473402 None:intergenic
CCATTATGTACAGGACCTAC+AGG 0.521264 3:+94474077 None:intergenic
AATAAGTTGCTAAAGCATGA+AGG 0.521742 3:-94475010 MsG0380017285.01.T01:CDS
CGTGGGCTTTATAGAGGTGT+AGG 0.521949 3:-94474011 MsG0380017285.01.T01:intron
AGAAGGACCCGTTCCTAACA+TGG 0.522339 3:+94474787 None:intergenic
ACAAGTGCCTATAAAGAAGC+TGG 0.523472 3:-94474038 MsG0380017285.01.T01:CDS
ACAAGAAAGGCGCATCAGAA+TGG 0.524845 3:+94473463 None:intergenic
ATAAAATGCAAGGCTGCGTA+TGG 0.526789 3:+94474851 None:intergenic
CACCACATATGACATGATGA+AGG 0.528465 3:-94472207 MsG0380017285.01.T01:CDS
ACTTATATTTACCGAGGGTG+CGG 0.534542 3:+94471672 None:intergenic
TGTCTCTTAACAACATCCAA+AGG 0.535374 3:+94473401 None:intergenic
ATCTACTGCCACCGCACCCT+CGG 0.535446 3:-94471683 MsG0380017285.01.T01:three_prime_UTR
GTTAAGGAGTTAATTGCTGG+TGG 0.536683 3:-94476138 MsG0380017285.01.T01:CDS
CCAGCTAAAAGATCGATAGA+AGG 0.537017 3:+94474770 None:intergenic
TGAAATCGGTGATCCTTCAA+AGG 0.538410 3:-94476426 MsG0380017285.01.T01:five_prime_UTR
CATATGACATGATGAAGGCT+TGG 0.542135 3:-94472202 MsG0380017285.01.T01:CDS
TGGCGTTTAAGGGAGGAGAA+CGG 0.545217 3:+94476455 None:intergenic
CTGTAAGTTTATATTATTTG+GGG 0.547194 3:-94471775 MsG0380017285.01.T01:three_prime_UTR
GTTAAGAGACAAATGCAGGT+TGG 0.547616 3:-94473389 MsG0380017285.01.T01:CDS
TTTAAGGGAGGAGAACGGGT+TGG 0.550680 3:+94476460 None:intergenic
GGAAGATTGTTCGAAATCAA+GGG 0.550950 3:-94473307 MsG0380017285.01.T01:CDS
ACCAAAGGATGTATCAAAGA+TGG 0.551765 3:-94474122 MsG0380017285.01.T01:CDS
AAGGATCACCGATTTCAAAA+CGG 0.555000 3:+94476432 None:intergenic
ACGGGTTAAGATACTTTGGC+AGG 0.560352 3:-94476073 MsG0380017285.01.T01:intron
GGAAGAATTCCAGTAAGGGT+TGG 0.561588 3:+94473554 None:intergenic
CTCATATGTCATAAAATGCA+AGG 0.566747 3:+94474841 None:intergenic
AAATGCAATACTATTTCACT+AGG 0.568079 3:-94471880 MsG0380017285.01.T01:three_prime_UTR
ATATTATTTGGGGAATGCAA+GGG 0.572688 3:-94471765 MsG0380017285.01.T01:three_prime_UTR
AGCCTTCATCATGTCATATG+TGG 0.577415 3:+94472205 None:intergenic
TTGTTCGAAATCAAGGGTGG+AGG 0.579018 3:-94473301 MsG0380017285.01.T01:CDS
TTGGTACGGGCAAGATCTAA+GGG 0.579231 3:+94474710 None:intergenic
CAATTATCCCATGTTAGGAA+CGG 0.586032 3:-94474795 MsG0380017285.01.T01:CDS
ACCAAGATTGTGAAATCCAC+CGG 0.586652 3:+94475048 None:intergenic
TTTAGCTGGCTCAGCAGCAG+GGG 0.587262 3:-94474756 MsG0380017285.01.T01:CDS
ATATGGAAGAATTCCAGTAA+GGG 0.589360 3:+94473550 None:intergenic
GTATTGATTAATTATTCACA+AGG 0.592307 3:+94472015 None:intergenic
GTGAAACTAATTGCAGCTGA+TGG 0.596426 3:+94472227 None:intergenic
TATATTTACCGAGGGTGCGG+TGG 0.596708 3:+94471675 None:intergenic
GACATGATGAAGGCTTGGCT+TGG 0.597274 3:-94472197 MsG0380017285.01.T01:CDS
GCAGTTCATTCTCAACCTGT+AGG 0.601300 3:-94474092 MsG0380017285.01.T01:CDS
TTATAGGTGGTGGACACCAA+AGG 0.602285 3:-94474137 MsG0380017285.01.T01:intron
TAAAACCAAAGTTAGGAGAA+CGG 0.603962 3:-94476502 MsG0380017285.01.T01:five_prime_UTR
ATCTACGAGTTACATGCCTA+AGG 0.607911 3:+94471922 None:intergenic
AAAACGGTGGCGTTTAAGGG+AGG 0.608386 3:+94476448 None:intergenic
AGTATCTTAACCCGTTCGAG+AGG 0.612939 3:+94476081 None:intergenic
TTAGCTGGCTCAGCAGCAGG+GGG 0.614047 3:-94474755 MsG0380017285.01.T01:CDS
AGGCTGCGTATGGAACAATC+CGG 0.618289 3:+94474861 None:intergenic
GAAGGACCCGTTCCTAACAT+GGG 0.618969 3:+94474788 None:intergenic
TGTTGTTAAGAGACAAATGC+AGG 0.624133 3:-94473393 MsG0380017285.01.T01:CDS
CGTCAACTTATATTTACCGA+GGG 0.624382 3:+94471667 None:intergenic
TATTGATTAATTATTCACAA+GGG 0.637270 3:+94472016 None:intergenic
ATAAAGAAGCTGGAGTTCGT+GGG 0.638356 3:-94474028 MsG0380017285.01.T01:CDS
TTTATGATCATGCTGATGCA+TGG 0.638732 3:-94471731 MsG0380017285.01.T01:three_prime_UTR
CTACTTCTAGAGAAAGAGAA+CGG 0.656514 3:+94476327 None:intergenic
ACGTCAACTTATATTTACCG+AGG 0.667237 3:+94471666 None:intergenic
AGATTGTTCGAAATCAAGGG+TGG 0.681478 3:-94473304 MsG0380017285.01.T01:CDS
GTATACAAAATATTGATCAG+AGG 0.692451 3:-94472041 MsG0380017285.01.T01:three_prime_UTR
TCGGTAAATATAAGTTGACG+TGG 0.716252 3:-94471664 MsG0380017285.01.T01:three_prime_UTR
AGGCGCACAGGAGTTTCACG+AGG 0.719839 3:-94471812 MsG0380017285.01.T01:three_prime_UTR
GATCACCGATTTCAAAACGG+TGG 0.734682 3:+94476435 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+AGG - Chr3:94472533-94472552 MsG0380017285.01.T01:intron 0.0%
!! AAAAAACAAAAATAAAATGA+AGG + Chr3:94473119-94473138 None:intergenic 10.0%
!!! AAATATTTTTACAAAGTAAA+CGG + Chr3:94475743-94475762 None:intergenic 10.0%
!!! TATAATTGATTTTCATAAAA+TGG - Chr3:94475425-94475444 MsG0380017285.01.T01:intron 10.0%
!! ACTGTAAGTTTATATTATTT+GGG - Chr3:94476435-94476454 MsG0380017285.01.T01:five_prime_UTR 15.0%
!! ATTAGTTGTATGTAATAAAT+TGG - Chr3:94473899-94473918 MsG0380017285.01.T01:intron 15.0%
!! CAAAGTATATATGTATATAA+TGG + Chr3:94473970-94473989 None:intergenic 15.0%
!! CATTATATACATATATACTT+TGG - Chr3:94473968-94473987 MsG0380017285.01.T01:intron 15.0%
!! TAGTATAAGATTATATGATA+AGG + Chr3:94474982-94475001 None:intergenic 15.0%
!! TTAAAATTAATGTTAAGATG+TGG - Chr3:94475140-94475159 MsG0380017285.01.T01:intron 15.0%
!!! AATATTTTTACAAAGTAAAC+GGG + Chr3:94475742-94475761 None:intergenic 15.0%
!!! ATTTTATATTTTTACAGACA+AGG - Chr3:94473139-94473158 MsG0380017285.01.T01:intron 15.0%
!!! GTTTTTGTTTACAATTTTAT+AGG - Chr3:94474058-94474077 MsG0380017285.01.T01:CDS 15.0%
!!! TATATTTTTGCATTCTAATT+AGG - Chr3:94476379-94476398 MsG0380017285.01.T01:five_prime_UTR 15.0%
!!! TATTGATTAATTATTCACAA+GGG + Chr3:94476198-94476217 None:intergenic 15.0%
!! AAATAAAATGAAGGTTAAAG+AGG + Chr3:94473110-94473129 None:intergenic 20.0%
!! AAATGAAAATCAGAAACAAA+AGG + Chr3:94473840-94473859 None:intergenic 20.0%
!! AAGTTACAATAGAAAATTTC+AGG + Chr3:94475864-94475883 None:intergenic 20.0%
!! AATGAATGTATTGAAAACAT+TGG + Chr3:94474608-94474627 None:intergenic 20.0%
!! ATAAAATGGCTTGAATAAAT+TGG - Chr3:94475439-94475458 MsG0380017285.01.T01:intron 20.0%
!! ATTATGATTGCCAAAAATAA+AGG + Chr3:94474255-94474274 None:intergenic 20.0%
!! CATACAAAAATACATTTGAT+GGG - Chr3:94474877-94474896 MsG0380017285.01.T01:CDS 20.0%
!! CTGTAAGTTTATATTATTTG+GGG - Chr3:94476436-94476455 MsG0380017285.01.T01:five_prime_UTR 20.0%
!! GACTGTAAGTTTATATTATT+TGG - Chr3:94476434-94476453 MsG0380017285.01.T01:five_prime_UTR 20.0%
!! GTCAATATAAATAATATTCC+AGG + Chr3:94474394-94474413 None:intergenic 20.0%
!! TATAATGTAACATCAAACAA+TGG + Chr3:94472715-94472734 None:intergenic 20.0%
!! TATATACATATATACTTTGG+TGG - Chr3:94473971-94473990 MsG0380017285.01.T01:intron 20.0%
!! TGAATACATTCATTCATTAT+AGG + Chr3:94472239-94472258 None:intergenic 20.0%
!! TTCATTACTGTATATGATAT+AGG + Chr3:94473815-94473834 None:intergenic 20.0%
!!! ATCAAATGTATTTTTGTATG+CGG + Chr3:94474877-94474896 None:intergenic 20.0%
!!! CATGCTTTTCAAAATTTAAA+TGG + Chr3:94475697-94475716 None:intergenic 20.0%
!!! GTATTGATTAATTATTCACA+AGG + Chr3:94476199-94476218 None:intergenic 20.0%
!!! TCCAAGACTATTTTTTAAAT+GGG - Chr3:94473004-94473023 MsG0380017285.01.T01:intron 20.0%
!!! TTAAGATTTTGTTACAAGAT+TGG + Chr3:94475124-94475143 None:intergenic 20.0%
!!! TTATTTTTGGCAATCATAAT+TGG - Chr3:94474255-94474274 MsG0380017285.01.T01:intron 20.0%
!!! TTCATTATTTCTTAATCCTT+AGG - Chr3:94476273-94476292 MsG0380017285.01.T01:five_prime_UTR 20.0%
!!! TTTGTTTACAATTTTATAGG+TGG - Chr3:94474061-94474080 MsG0380017285.01.T01:CDS 20.0%
! AAACCATTAATTTCAATCCT+TGG + Chr3:94475608-94475627 None:intergenic 25.0%
! AAATGCAATACTATTTCACT+AGG - Chr3:94476331-94476350 MsG0380017285.01.T01:five_prime_UTR 25.0%
! AAGGATTGAAATATGGTTAA+AGG + Chr3:94473550-94473569 None:intergenic 25.0%
! AATACAAGAAATGATAGCTA+AGG + Chr3:94474573-94474592 None:intergenic 25.0%
! ACCCATTTAAAAAATAGTCT+TGG + Chr3:94473008-94473027 None:intergenic 25.0%
! ATTAACTCCTTAACATAAAC+AGG + Chr3:94472067-94472086 None:intergenic 25.0%
! ATTACAATTTACAGGTTTCA+AGG + Chr3:94473569-94473588 None:intergenic 25.0%
! ATTTCCTAGGAATTCATTTA+GGG + Chr3:94474481-94474500 None:intergenic 25.0%
! GAGTGAACATTTCATAAATA+TGG - Chr3:94475504-94475523 MsG0380017285.01.T01:intron 25.0%
! GATCTTCATTCTGTATATAT+TGG - Chr3:94472389-94472408 MsG0380017285.01.T01:intron 25.0%
! GCATACAAAAATACATTTGA+TGG - Chr3:94474876-94474895 MsG0380017285.01.T01:CDS 25.0%
! GTATACAAAATATTGATCAG+AGG - Chr3:94476170-94476189 MsG0380017285.01.T01:CDS 25.0%
! GTGTATGTATTACAATTTAC+AGG + Chr3:94473577-94473596 None:intergenic 25.0%
! GTTACATTATACATAATCGA+TGG - Chr3:94472724-94472743 MsG0380017285.01.T01:intron 25.0%
! TATAAAAATGAAGTCAGTCA+CGG + Chr3:94476116-94476135 None:intergenic 25.0%
! TATTTCCTAGGAATTCATTT+AGG + Chr3:94474482-94474501 None:intergenic 25.0%
! TCAGAATGATAGATTCTTAT+TGG + Chr3:94475092-94475111 None:intergenic 25.0%
! TCATTAGTCATATGGTTTAA+AGG + Chr3:94475584-94475603 None:intergenic 25.0%
! TCGTTTGAATTTCTACTAAT+AGG - Chr3:94473739-94473758 MsG0380017285.01.T01:intron 25.0%
! TGTCCATATTATATATCCTT+TGG - Chr3:94475715-94475734 MsG0380017285.01.T01:intron 25.0%
! TTAGCAACTTATTCATAGAT+TGG + Chr3:94473194-94473213 None:intergenic 25.0%
! TTCTTGTTGGATAATTATGT+TGG - Chr3:94474278-94474297 MsG0380017285.01.T01:intron 25.0%
! TTTAATGCAATTGACAACAA+TGG - Chr3:94472980-94472999 MsG0380017285.01.T01:intron 25.0%
!! AGTATCTTAAGTTATTTCCT+AGG + Chr3:94474494-94474513 None:intergenic 25.0%
!! AGTTTCTTCAGGATAATTTT+TGG - Chr3:94476064-94476083 MsG0380017285.01.T01:intron 25.0%
!! TAGTGTAAAACTGATTTACT+TGG - Chr3:94475189-94475208 MsG0380017285.01.T01:intron 25.0%
!! TATATAATGGAACATGATAC+AGG + Chr3:94473957-94473976 None:intergenic 25.0%
!! TCTCTTGTTCACTAAATTTT+GGG - Chr3:94475329-94475348 MsG0380017285.01.T01:intron 25.0%
!! TTCTCTTGTTCACTAAATTT+TGG - Chr3:94475328-94475347 MsG0380017285.01.T01:intron 25.0%
!! TTGATTTTCATCTGATTGTT+TGG - Chr3:94472174-94472193 MsG0380017285.01.T01:CDS 25.0%
!!! ACCAATACAACCTTTATTTT+TGG - Chr3:94474242-94474261 MsG0380017285.01.T01:intron 25.0%
!!! CTATTTTTTAAATGGGTGTA+TGG - Chr3:94473011-94473030 MsG0380017285.01.T01:intron 25.0%
!!! CTCCAAGACTATTTTTTAAA+TGG - Chr3:94473003-94473022 MsG0380017285.01.T01:intron 25.0%
!!! TGACTGACTTCATTTTTATA+GGG - Chr3:94476116-94476135 MsG0380017285.01.T01:CDS 25.0%
!!! TGTTTCAAGTTTGAGTTTAA+AGG - Chr3:94475028-94475047 MsG0380017285.01.T01:CDS 25.0%
AAACTGGATAAATGATGCAT+TGG - Chr3:94475663-94475682 MsG0380017285.01.T01:intron 30.0%
AAATATCTGAGTTACTTGCT+TGG - Chr3:94472412-94472431 MsG0380017285.01.T01:intron 30.0%
AAGATTCCTAATCATTTCCT+TGG - Chr3:94475894-94475913 MsG0380017285.01.T01:intron 30.0%
AATAAGTTGCTAAAGCATGA+AGG - Chr3:94473201-94473220 MsG0380017285.01.T01:intron 30.0%
ACATTATACATAATCGATGG+TGG - Chr3:94472727-94472746 MsG0380017285.01.T01:intron 30.0%
ACCAAAACTTGAAGAGATTA+GGG + Chr3:94475227-94475246 None:intergenic 30.0%
ACCTATGTATCCTTATAAAC+AGG + Chr3:94474454-94474473 None:intergenic 30.0%
ACTTTGGTAAATGGAATTTC+TGG - Chr3:94472476-94472495 MsG0380017285.01.T01:intron 30.0%
AGGTTTCAAGGATTGAAATA+TGG + Chr3:94473557-94473576 None:intergenic 30.0%
ATAGTGCTAGAATTGCAATT+TGG + Chr3:94473881-94473900 None:intergenic 30.0%
ATATGGAAGAATTCCAGTAA+GGG + Chr3:94474664-94474683 None:intergenic 30.0%
ATATTATTTGGGGAATGCAA+GGG - Chr3:94476446-94476465 MsG0380017285.01.T01:five_prime_UTR 30.0%
ATCCTTATAAACAGGGATTA+GGG + Chr3:94474446-94474465 None:intergenic 30.0%
ATGGCTTGAATAAATTGGAT+TGG - Chr3:94475444-94475463 MsG0380017285.01.T01:intron 30.0%
ATTACAAGGATTGCAAAATC+AGG + Chr3:94472637-94472656 None:intergenic 30.0%
ATTATAGGCGAACAATACAT+TGG + Chr3:94472224-94472243 None:intergenic 30.0%
CATAAATATGGCAAGTTAAC+TGG - Chr3:94475516-94475535 MsG0380017285.01.T01:intron 30.0%
CCAATATACTATCTTGCATT+GGG - Chr3:94473642-94473661 MsG0380017285.01.T01:intron 30.0%
CCTATGTATCCTTATAAACA+GGG + Chr3:94474453-94474472 None:intergenic 30.0%
CGTAAGCATTAACTACATAA+GGG - Chr3:94474947-94474966 MsG0380017285.01.T01:intron 30.0%
CTAAACCTAAAACCAAAGTT+AGG - Chr3:94471702-94471721 MsG0380017285.01.T01:three_prime_UTR 30.0%
CTCATATGTCATAAAATGCA+AGG + Chr3:94473373-94473392 None:intergenic 30.0%
CTTTGGTAAATGGAATTTCT+GGG - Chr3:94472477-94472496 MsG0380017285.01.T01:intron 30.0%
GAGAGAAAATAATAAGAACC+TGG - Chr3:94474373-94474392 MsG0380017285.01.T01:intron 30.0%
GCCAAAAATAAAGGTTGTAT+TGG + Chr3:94474246-94474265 None:intergenic 30.0%
GGAGAAATAAACGTTAAAAC+AGG + Chr3:94472694-94472713 None:intergenic 30.0%
GGTCCAAAGGATATATAATA+TGG + Chr3:94475721-94475740 None:intergenic 30.0%
TAAAACCAAAGTTAGGAGAA+CGG - Chr3:94471709-94471728 MsG0380017285.01.T01:three_prime_UTR 30.0%
TACCAAAACTTGAAGAGATT+AGG + Chr3:94475228-94475247 None:intergenic 30.0%
TAGAACTTTAAACCAGCATA+TGG + Chr3:94474681-94474700 None:intergenic 30.0%
TATATTATTTGGGGAATGCA+AGG - Chr3:94476445-94476464 MsG0380017285.01.T01:five_prime_UTR 30.0%
TATCCTTATAAACAGGGATT+AGG + Chr3:94474447-94474466 None:intergenic 30.0%
TATGTTAAGGAGTTAATTGC+TGG - Chr3:94472070-94472089 MsG0380017285.01.T01:three_prime_UTR 30.0%
TATTACAGTGGTAGATAGAT+AGG - Chr3:94475482-94475501 MsG0380017285.01.T01:intron 30.0%
TCAAGAGTTTCTCATCTTAT+TGG + Chr3:94475806-94475825 None:intergenic 30.0%
TCAATATTCCACTAAGCTAT+AGG + Chr3:94472809-94472828 None:intergenic 30.0%
TCCAATATACTATCTTGCAT+TGG - Chr3:94473641-94473660 MsG0380017285.01.T01:intron 30.0%
TGAGTTTAAAGGAGATTTAC+TGG - Chr3:94475039-94475058 MsG0380017285.01.T01:CDS 30.0%
TGGATCATGTAATTCTTTGA+TGG - Chr3:94472447-94472466 MsG0380017285.01.T01:intron 30.0%
TGGATTTCAACTTTGGTAAA+TGG - Chr3:94472467-94472486 MsG0380017285.01.T01:intron 30.0%
TGTGATCAATACCATTTAGT+GGG - Chr3:94473694-94473713 MsG0380017285.01.T01:intron 30.0%
TTCACTAGGATTAATATGTC+AGG - Chr3:94476345-94476364 MsG0380017285.01.T01:five_prime_UTR 30.0%
TTCTTCTCAAGATTCTAGAT+TGG - Chr3:94471985-94472004 MsG0380017285.01.T01:three_prime_UTR 30.0%
TTGATGTCATTGTATTACAG+TGG - Chr3:94475470-94475489 MsG0380017285.01.T01:intron 30.0%
TTGTGAAGTGTGATATCATT+TGG - Chr3:94476229-94476248 MsG0380017285.01.T01:CDS 30.0%
TTTGGTAAATGGAATTTCTG+GGG - Chr3:94472478-94472497 MsG0380017285.01.T01:intron 30.0%
! CAATCATAATTGGTTCTTGT+TGG - Chr3:94474265-94474284 MsG0380017285.01.T01:intron 30.0%
! GTTTACAATTTTATAGGTGG+TGG - Chr3:94474064-94474083 MsG0380017285.01.T01:CDS 30.0%
! TATGTTGGAATTCTTGTTTG+TGG - Chr3:94474293-94474312 MsG0380017285.01.T01:intron 30.0%
! TGCATTTTATGACATATGAG+CGG - Chr3:94473373-94473392 MsG0380017285.01.T01:CDS 30.0%
! TTCTGGGGAACATATAATAA+AGG - Chr3:94472493-94472512 MsG0380017285.01.T01:intron 30.0%
!! AAAATACATTTGATGGGCTT+AGG - Chr3:94474883-94474902 MsG0380017285.01.T01:CDS 30.0%
!! ATATTTTTACAGACAAGGAC+CGG - Chr3:94473144-94473163 MsG0380017285.01.T01:intron 30.0%
!! GTATTGAAAAAGGTGTTAGA+GGG - Chr3:94473767-94473786 MsG0380017285.01.T01:intron 30.0%
!! GTGACTGACTTCATTTTTAT+AGG - Chr3:94476115-94476134 MsG0380017285.01.T01:CDS 30.0%
!! TCTTTGATGGATTTCAACTT+TGG - Chr3:94472460-94472479 MsG0380017285.01.T01:intron 30.0%
!! TGATTTTCTCTGATTCGAAT+TGG - Chr3:94471831-94471850 MsG0380017285.01.T01:three_prime_UTR 30.0%
AAAACCAAAGTTAGGAGAAC+GGG - Chr3:94471710-94471729 MsG0380017285.01.T01:three_prime_UTR 35.0%
AAACGTTAAAACAGGCAAGA+AGG + Chr3:94472686-94472705 None:intergenic 35.0%
AACCCTAATCCCTGTTTATA+AGG - Chr3:94474441-94474460 MsG0380017285.01.T01:intron 35.0%
AATTATCCCATGTTAGGAAC+GGG - Chr3:94473417-94473436 MsG0380017285.01.T01:CDS 35.0%
ACCAAAGGATGTATCAAAGA+TGG - Chr3:94474089-94474108 MsG0380017285.01.T01:CDS 35.0%
ACCATCTTTGATACATCCTT+TGG + Chr3:94474093-94474112 None:intergenic 35.0%
ACGTCAACTTATATTTACCG+AGG + Chr3:94476548-94476567 None:intergenic 35.0%
ACTATAGAACACCGTAAAGA+GGG + Chr3:94473037-94473056 None:intergenic 35.0%
AGAGCAAGGAATGTTAAGAA+TGG + Chr3:94475950-94475969 None:intergenic 35.0%
AGGAAGATTGTTCGAAATCA+AGG - Chr3:94474903-94474922 MsG0380017285.01.T01:intron 35.0%
ATGCATGGTATTTGCTTGTT+TGG - Chr3:94476495-94476514 MsG0380017285.01.T01:five_prime_UTR 35.0%
ATTCCTAATCATTTCCTTGG+AGG - Chr3:94475897-94475916 MsG0380017285.01.T01:intron 35.0%
CAAAACTTGAAGAGATTAGG+GGG + Chr3:94475225-94475244 None:intergenic 35.0%
CAACACAAAAAAGCCTTTGA+AGG + Chr3:94471801-94471820 None:intergenic 35.0%
CAATTATCCCATGTTAGGAA+CGG - Chr3:94473416-94473435 MsG0380017285.01.T01:CDS 35.0%
CATATGAGCGGTATAAAAGT+TGG - Chr3:94473385-94473404 MsG0380017285.01.T01:CDS 35.0%
CATATGGAAGAATTCCAGTA+AGG + Chr3:94474665-94474684 None:intergenic 35.0%
CATGCTACAATGTCTCATAT+AGG + Chr3:94473604-94473623 None:intergenic 35.0%
CCAAAACTTGAAGAGATTAG+GGG + Chr3:94475226-94475245 None:intergenic 35.0%
CCCAATGCAAGATAGTATAT+TGG + Chr3:94473645-94473664 None:intergenic 35.0%
CCCTGTTTATAAGGATACAT+AGG - Chr3:94474450-94474469 MsG0380017285.01.T01:intron 35.0%
CCTGTACATAATGGCATTAA+AGG - Chr3:94474143-94474162 MsG0380017285.01.T01:intron 35.0%
CCTTTAATGCCATTATGTAC+AGG + Chr3:94474146-94474165 None:intergenic 35.0%
CGTCAACTTATATTTACCGA+GGG + Chr3:94476547-94476566 None:intergenic 35.0%
CTAACATGGGATAATTGTTC+AGG + Chr3:94473413-94473432 None:intergenic 35.0%
CTGAACAATTATCCCATGTT+AGG - Chr3:94473411-94473430 MsG0380017285.01.T01:CDS 35.0%
CTTTACCTGATAAGCAAGTT+TGG + Chr3:94473523-94473542 None:intergenic 35.0%
CTTTCTCAAACTTCAGAAAC+TGG - Chr3:94475647-94475666 MsG0380017285.01.T01:intron 35.0%
GAACATATAATAAAGGAGCG+AGG - Chr3:94472500-94472519 MsG0380017285.01.T01:intron 35.0%
GAGCCAAGGATTGAAATTAA+TGG - Chr3:94475602-94475621 MsG0380017285.01.T01:intron 35.0%
GAGGCAACTATGTATTAGTT+TGG - Chr3:94475916-94475935 MsG0380017285.01.T01:intron 35.0%
GCGTAAGCATTAACTACATA+AGG - Chr3:94474946-94474965 MsG0380017285.01.T01:intron 35.0%
GGAAGATTGTTCGAAATCAA+GGG - Chr3:94474904-94474923 MsG0380017285.01.T01:intron 35.0%
GTCTCTTAACAACATCCAAA+GGG + Chr3:94474812-94474831 None:intergenic 35.0%
GTGTGATCAATACCATTTAG+TGG - Chr3:94473693-94473712 MsG0380017285.01.T01:intron 35.0%
TAATAAAGGAGCGAGGATTT+AGG - Chr3:94472507-94472526 MsG0380017285.01.T01:intron 35.0%
TACAATGCTTGGAGTAAACA+AGG + Chr3:94472769-94472788 None:intergenic 35.0%
TCGATGTGTGGAAAATTACA+AGG + Chr3:94472651-94472670 None:intergenic 35.0%
TGTCTCTTAACAACATCCAA+AGG + Chr3:94474813-94474832 None:intergenic 35.0%
TGTTGTTAAGAGACAAATGC+AGG - Chr3:94474818-94474837 MsG0380017285.01.T01:CDS 35.0%
TTAAGAGACAAATGCAGGTT+GGG - Chr3:94474823-94474842 MsG0380017285.01.T01:CDS 35.0%
TTCCATTGTATGAACGTATG+AGG - Chr3:94473927-94473946 MsG0380017285.01.T01:intron 35.0%
TTGCTTGGAAATGATCGAAA+TGG - Chr3:94472427-94472446 MsG0380017285.01.T01:intron 35.0%
TTTAACGCGATTGACAACAA+TGG - Chr3:94472937-94472956 MsG0380017285.01.T01:intron 35.0%
TTTATGATCATGCTGATGCA+TGG - Chr3:94476480-94476499 MsG0380017285.01.T01:five_prime_UTR 35.0%
! AAGGTTGTATTGGTAGATTC+TGG + Chr3:94474236-94474255 None:intergenic 35.0%
! ACTATGTATTAGTTTGGCTC+TGG - Chr3:94475922-94475941 MsG0380017285.01.T01:intron 35.0%
! AGCTAAGGCATGCTTTTATT+AGG + Chr3:94474558-94474577 None:intergenic 35.0%
! AGGTTGTATTGGTAGATTCT+GGG + Chr3:94474235-94474254 None:intergenic 35.0%
! ATAGGAGAGCGTATTGAAAA+AGG - Chr3:94473757-94473776 MsG0380017285.01.T01:intron 35.0%
! ATTTTGTATACGTCGTAAGC+AGG + Chr3:94476161-94476180 None:intergenic 35.0%
! CTAAAGCATGAAGGTTTTCT+AGG - Chr3:94473210-94473229 MsG0380017285.01.T01:intron 35.0%
! CTACTTCTAGAGAAAGAGAA+CGG + Chr3:94471887-94471906 None:intergenic 35.0%
! CTCTTTCTCTAGAAGTAGAT+GGG - Chr3:94471889-94471908 MsG0380017285.01.T01:three_prime_UTR 35.0%
! GAACCTAGAAAGTGTACTTT+AGG + Chr3:94475285-94475304 None:intergenic 35.0%
! GTTGTGGGTTTCTAGATAAA+AGG - Chr3:94474348-94474367 MsG0380017285.01.T01:intron 35.0%
! TCGGTAAATATAAGTTGACG+TGG - Chr3:94476547-94476566 MsG0380017285.01.T01:five_prime_UTR 35.0%
! TCTCTTTCTCTAGAAGTAGA+TGG - Chr3:94471888-94471907 MsG0380017285.01.T01:three_prime_UTR 35.0%
! TGTCTTCCTTATGTTTTGTC+TGG - Chr3:94475836-94475855 MsG0380017285.01.T01:intron 35.0%
! TTTTGTATACGTCGTAAGCA+GGG + Chr3:94476160-94476179 None:intergenic 35.0%
!! AAGGATCACCGATTTCAAAA+CGG + Chr3:94471782-94471801 None:intergenic 35.0%
!! ACATATATACTTTGGTGGTG+AGG - Chr3:94473976-94473995 MsG0380017285.01.T01:intron 35.0%
!! ATATATACTTTGGTGGTGAG+GGG - Chr3:94473978-94473997 MsG0380017285.01.T01:intron 35.0%
!! CAGTTTCTGAAGTTTGAGAA+AGG + Chr3:94475649-94475668 None:intergenic 35.0%
!! CATATATACTTTGGTGGTGA+GGG - Chr3:94473977-94473996 MsG0380017285.01.T01:intron 35.0%
!! CGTATTGAAAAAGGTGTTAG+AGG - Chr3:94473766-94473785 MsG0380017285.01.T01:intron 35.0%
!! TTTCTGCTCCTTGATTTGTA+TGG - Chr3:94472588-94472607 MsG0380017285.01.T01:intron 35.0%
!!! GTTCTCCTAACTTTGGTTTT+AGG + Chr3:94471710-94471729 None:intergenic 35.0%
AACAATCTGGAAACAGAGCA+AGG + Chr3:94475964-94475983 None:intergenic 40.0%
AACTCCTGTCTTGAAGTTGT+GGG - Chr3:94474333-94474352 MsG0380017285.01.T01:intron 40.0%
AAGTCTCGATCAGTTTCTTC+AGG - Chr3:94476053-94476072 MsG0380017285.01.T01:intron 40.0%
ACAAGTGCCTATAAAGAAGC+TGG - Chr3:94474173-94474192 MsG0380017285.01.T01:intron 40.0%
ACCAAGATTGTGAAATCCAC+CGG + Chr3:94473166-94473185 None:intergenic 40.0%
ACCATATGACTAATGAGCCA+AGG - Chr3:94475588-94475607 MsG0380017285.01.T01:intron 40.0%
ACGAACTCCAGCTTCTTTAT+AGG + Chr3:94474183-94474202 None:intergenic 40.0%
ACTGGAATTCTTCCATATGC+TGG - Chr3:94474666-94474685 MsG0380017285.01.T01:intron 40.0%
ACTTATATTTACCGAGGGTG+CGG + Chr3:94476542-94476561 None:intergenic 40.0%
AGATTGTTCGAAATCAAGGG+TGG - Chr3:94474907-94474926 MsG0380017285.01.T01:intron 40.0%
AGCAAGAGCCATACAAATCA+AGG + Chr3:94472599-94472618 None:intergenic 40.0%
AGCCTTCATCATGTCATATG+TGG + Chr3:94476009-94476028 None:intergenic 40.0%
AGTACACTTTCTAGGTTCTG+TGG - Chr3:94475287-94475306 MsG0380017285.01.T01:intron 40.0%
ATAAAATGCAAGGCTGCGTA+TGG + Chr3:94473363-94473382 None:intergenic 40.0%
ATAAAGAAGCTGGAGTTCGT+GGG - Chr3:94474183-94474202 MsG0380017285.01.T01:intron 40.0%
ATCTACGAGTTACATGCCTA+AGG + Chr3:94476292-94476311 None:intergenic 40.0%
ATGGACTTCTGATGTTCTTC+AGG + Chr3:94474732-94474751 None:intergenic 40.0%
ATTGGACGCATGTATAAAGC+TGG + Chr3:94475074-94475093 None:intergenic 40.0%
CACCACATATGACATGATGA+AGG - Chr3:94476004-94476023 MsG0380017285.01.T01:intron 40.0%
CACCTCATACGTTCATACAA+TGG + Chr3:94473932-94473951 None:intergenic 40.0%
CACTATAGAACACCGTAAAG+AGG + Chr3:94473038-94473057 None:intergenic 40.0%
CAGGAACCAGACAAAACATA+AGG + Chr3:94475845-94475864 None:intergenic 40.0%
CATATGACATGATGAAGGCT+TGG - Chr3:94476009-94476028 MsG0380017285.01.T01:intron 40.0%
CCACATTAGCATAGGTTAAC+AGG + Chr3:94473300-94473319 None:intergenic 40.0%
CCAGCTAAAAGATCGATAGA+AGG + Chr3:94473444-94473463 None:intergenic 40.0%
CCATACTTGACTACAATGCT+TGG + Chr3:94472780-94472799 None:intergenic 40.0%
CCTGATAAGCAAGTTTGGTA+CGG + Chr3:94473518-94473537 None:intergenic 40.0%
CCTGTTAACCTATGCTAATG+TGG - Chr3:94473297-94473316 MsG0380017285.01.T01:CDS 40.0%
CTAATACATAGTTGCCTCCA+AGG + Chr3:94475914-94475933 None:intergenic 40.0%
CTGATAAGCAAGTTTGGTAC+GGG + Chr3:94473517-94473536 None:intergenic 40.0%
CTTGGAGTAAACAAGGAACA+AGG + Chr3:94472762-94472781 None:intergenic 40.0%
GAGCTTCAAAGTGGATAGAT+TGG - Chr3:94471926-94471945 MsG0380017285.01.T01:three_prime_UTR 40.0%
GATTAGCGTGATAGGTTATG+CGG + Chr3:94472328-94472347 None:intergenic 40.0%
GCAGACTTTAACATACCCTT+TGG - Chr3:94474794-94474813 MsG0380017285.01.T01:CDS 40.0%
GGATCTATGTTGTGATGCTA+TGG - Chr3:94472556-94472575 MsG0380017285.01.T01:intron 40.0%
GTGAAACTAATTGCAGCTGA+TGG + Chr3:94475987-94476006 None:intergenic 40.0%
GTGAACAAGAGAAATGACAC+TGG + Chr3:94475321-94475340 None:intergenic 40.0%
GTTAACCTATGCTAATGTGG+TGG - Chr3:94473300-94473319 MsG0380017285.01.T01:CDS 40.0%
GTTAAGAGACAAATGCAGGT+TGG - Chr3:94474822-94474841 MsG0380017285.01.T01:CDS 40.0%
GTTAAGGAGTTAATTGCTGG+TGG - Chr3:94472073-94472092 MsG0380017285.01.T01:three_prime_UTR 40.0%
TAACACACTGCTCTGTTGTT+TGG - Chr3:94475378-94475397 MsG0380017285.01.T01:intron 40.0%
TAACTCCTGTCTTGAAGTTG+TGG - Chr3:94474332-94474351 MsG0380017285.01.T01:intron 40.0%
TACAAAGTAAACGGGTCCAA+AGG + Chr3:94475734-94475753 None:intergenic 40.0%
TATAAAGAAGCTGGAGTTCG+TGG - Chr3:94474182-94474201 MsG0380017285.01.T01:intron 40.0%
TCCTTGGCTCATTAGTCATA+TGG + Chr3:94475592-94475611 None:intergenic 40.0%
TCGACCCTAAATGAATTCCT+AGG - Chr3:94474474-94474493 MsG0380017285.01.T01:intron 40.0%
TCGCGTTCCTGTTTATGTTA+AGG - Chr3:94472057-94472076 MsG0380017285.01.T01:three_prime_UTR 40.0%
TCTCAAGATTCTAGATTGGC+TGG - Chr3:94471989-94472008 MsG0380017285.01.T01:three_prime_UTR 40.0%
TGAAATCGGTGATCCTTCAA+AGG - Chr3:94471785-94471804 MsG0380017285.01.T01:three_prime_UTR 40.0%
TGCAGAGATTCAAGAAAGCT+TGG - Chr3:94475557-94475576 MsG0380017285.01.T01:intron 40.0%
TTCAAAACGGTGGCGTTTAA+GGG + Chr3:94471769-94471788 None:intergenic 40.0%
TTGCCTCCAAGGAAATGATT+AGG + Chr3:94475903-94475922 None:intergenic 40.0%
TTGGACCTGATGAAAGAGAA+AGG + Chr3:94474641-94474660 None:intergenic 40.0%
TTTCAAAACGGTGGCGTTTA+AGG + Chr3:94471770-94471789 None:intergenic 40.0%
! AACACACTGCTCTGTTGTTT+GGG - Chr3:94475379-94475398 MsG0380017285.01.T01:intron 40.0%
! ACTGATCGAGACTTTTGTTG+AGG + Chr3:94476047-94476066 None:intergenic 40.0%
! AGATTCTAGATTGGCTGGTT+TGG - Chr3:94471994-94472013 MsG0380017285.01.T01:three_prime_UTR 40.0%
! CCAAGCATTGTAGTCAAGTA+TGG - Chr3:94472777-94472796 MsG0380017285.01.T01:intron 40.0%
! CCTAGAAAGTGTACTTTAGG+CGG + Chr3:94475282-94475301 None:intergenic 40.0%
! CCTTCTATCGATCTTTTAGC+TGG - Chr3:94473441-94473460 MsG0380017285.01.T01:CDS 40.0%
! GAGTTTTCTGAGCTTCAAAG+TGG - Chr3:94471917-94471936 MsG0380017285.01.T01:three_prime_UTR 40.0%
! GTAATGGAGCTAGTGTTATC+CGG - Chr3:94473331-94473350 MsG0380017285.01.T01:CDS 40.0%
!! CCCCTAATCTCTTCAAGTTT+TGG - Chr3:94475223-94475242 MsG0380017285.01.T01:intron 40.0%
!! GGACCTGCTCTAAAATAGTT+AGG - Chr3:94473715-94473734 MsG0380017285.01.T01:intron 40.0%
!! GTTGTGTTGATTAGCGTGAT+AGG + Chr3:94472336-94472355 None:intergenic 40.0%
!! TATATACTTTGGTGGTGAGG+GGG - Chr3:94473979-94473998 MsG0380017285.01.T01:intron 40.0%
!! TCGAACGGGTTAAGATACTT+TGG - Chr3:94472134-94472153 MsG0380017285.01.T01:three_prime_UTR 40.0%
!! TTAATTGCTGGTGGATTTGC+TGG - Chr3:94472082-94472101 MsG0380017285.01.T01:three_prime_UTR 40.0%
!! TTGATTTGTATGGCTCTTGC+TGG - Chr3:94472598-94472617 MsG0380017285.01.T01:intron 40.0%
!!! AAACGCCACCGTTTTGAAAT+CGG - Chr3:94471771-94471790 MsG0380017285.01.T01:three_prime_UTR 40.0%
!!! GAGCCTAACTATTTTAGAGC+AGG + Chr3:94473721-94473740 None:intergenic 40.0%
!!! TTTTTGGTGCTCACTTGTGA+TGG - Chr3:94476080-94476099 MsG0380017285.01.T01:CDS 40.0%
AGCCTGCAAAATGGAGCTAA+TGG - Chr3:94474846-94474865 MsG0380017285.01.T01:CDS 45.0%
AGTATCTTAACCCGTTCGAG+AGG + Chr3:94472133-94472152 None:intergenic 45.0%
ATTCTGATGCGCCTTTCTTG+TGG - Chr3:94474750-94474769 MsG0380017285.01.T01:CDS 45.0%
CAATAAGCTCACTCGATGTG+TGG + Chr3:94472663-94472682 None:intergenic 45.0%
CCATTATGTACAGGACCTAC+AGG + Chr3:94474137-94474156 None:intergenic 45.0%
CCGCCTAAAGTACACTTTCT+AGG - Chr3:94475279-94475298 MsG0380017285.01.T01:intron 45.0%
CCTCACCTTTCTCTTTCATC+AGG - Chr3:94474633-94474652 MsG0380017285.01.T01:intron 45.0%
CCTGATGAAAGAGAAAGGTG+AGG + Chr3:94474636-94474655 None:intergenic 45.0%
CCTGTAGGTCCTGTACATAA+TGG - Chr3:94474134-94474153 MsG0380017285.01.T01:CDS 45.0%
GAAACCCACAACTTCAAGAC+AGG + Chr3:94474340-94474359 None:intergenic 45.0%
GAAACCCGTTCTCCTAACTT+TGG + Chr3:94471717-94471736 None:intergenic 45.0%
GAACGGCGTATACTCAGAAT+TGG + Chr3:94471870-94471889 None:intergenic 45.0%
GAGCTCTTGCTGGATTGTTT+GGG - Chr3:94474772-94474791 MsG0380017285.01.T01:CDS 45.0%
GCAGTTCATTCTCAACCTGT+AGG - Chr3:94474119-94474138 MsG0380017285.01.T01:CDS 45.0%
GGAAGAATTCCAGTAAGGGT+TGG + Chr3:94474660-94474679 None:intergenic 45.0%
GGCTATAGCCTATAGCTTAG+TGG - Chr3:94472798-94472817 MsG0380017285.01.T01:intron 45.0%
TGCAACCACCACATTAGCAT+AGG + Chr3:94473308-94473327 None:intergenic 45.0%
TGCATTCTAATTAGGCGCAC+AGG - Chr3:94476387-94476406 MsG0380017285.01.T01:five_prime_UTR 45.0%
TTAGAGCAGGTCCCACTAAA+TGG + Chr3:94473708-94473727 None:intergenic 45.0%
TTGCAGCTGATGGAACAATC+TGG + Chr3:94475977-94475996 None:intergenic 45.0%
TTGGTACGGGCAAGATCTAA+GGG + Chr3:94473504-94473523 None:intergenic 45.0%
TTGTTCGAAATCAAGGGTGG+AGG - Chr3:94474910-94474929 MsG0380017285.01.T01:intron 45.0%
TTTGGTACGGGCAAGATCTA+AGG + Chr3:94473505-94473524 None:intergenic 45.0%
! ACAAGAAAGGCGCATCAGAA+TGG + Chr3:94474751-94474770 None:intergenic 45.0%
! ACCGGTGGATTTCACAATCT+TGG - Chr3:94473162-94473181 MsG0380017285.01.T01:intron 45.0%
! ACGGGTTAAGATACTTTGGC+AGG - Chr3:94472138-94472157 MsG0380017285.01.T01:exon 45.0%
! CCGTACCAAACTTGCTTATC+AGG - Chr3:94473515-94473534 MsG0380017285.01.T01:CDS 45.0%
! CTCCATTAGCTCCATTTTGC+AGG + Chr3:94474851-94474870 None:intergenic 45.0%
! GATCGAGACTTTTGTTGAGG+TGG + Chr3:94476044-94476063 None:intergenic 45.0%
! TTTTTACAGACAAGGACCGG+TGG - Chr3:94473147-94473166 MsG0380017285.01.T01:intron 45.0%
!! GATCACCGATTTCAAAACGG+TGG + Chr3:94471779-94471798 None:intergenic 45.0%
!! TAGTGCAAAGTGCTGTCAAG+TGG - Chr3:94472860-94472879 MsG0380017285.01.T01:intron 45.0%
!! TTATAGGTGGTGGACACCAA+AGG - Chr3:94474074-94474093 MsG0380017285.01.T01:CDS 45.0%
!! TTAAATTTAAAAAATAGTAT+AGG + Chr3:94472965-94472984 None:intergenic 5.0%
AAAACGGTGGCGTTTAAGGG+AGG + Chr3:94471766-94471785 None:intergenic 50.0%
AGAAGGACCCGTTCCTAACA+TGG + Chr3:94473427-94473446 None:intergenic 50.0%
AGGCTGCGTATGGAACAATC+CGG + Chr3:94473353-94473372 None:intergenic 50.0%
AGGGGGAGAGATACTTTCTG+AGG - Chr3:94473996-94474015 MsG0380017285.01.T01:intron 50.0%
CAGCAAGAGCTCCACAAGAA+AGG + Chr3:94474764-94474783 None:intergenic 50.0%
CTACAGCACTGTAGTGTTGC+AGG - Chr3:94472896-94472915 MsG0380017285.01.T01:intron 50.0%
CTTTCTTGTGGAGCTCTTGC+TGG - Chr3:94474762-94474781 MsG0380017285.01.T01:CDS 50.0%
GAAGGACCCGTTCCTAACAT+GGG + Chr3:94473426-94473445 None:intergenic 50.0%
GACATGATGAAGGCTTGGCT+TGG - Chr3:94476014-94476033 MsG0380017285.01.T01:intron 50.0%
GGAGCTCTTGCTGGATTGTT+TGG - Chr3:94474771-94474790 MsG0380017285.01.T01:CDS 50.0%
GGGGGAGAGATACTTTCTGA+GGG - Chr3:94473997-94474016 MsG0380017285.01.T01:intron 50.0%
TCATCAGGTCCAACCCTTAC+TGG - Chr3:94474648-94474667 MsG0380017285.01.T01:intron 50.0%
TGCTAATGTGGTGGTTGCAG+AGG - Chr3:94473309-94473328 MsG0380017285.01.T01:CDS 50.0%
TGGCGTTTAAGGGAGGAGAA+CGG + Chr3:94471759-94471778 None:intergenic 50.0%
TGGGTGTATGGCCCTCTTTA+CGG - Chr3:94473023-94473042 MsG0380017285.01.T01:intron 50.0%
TGTGGTGGTTGCAGAGGTAA+TGG - Chr3:94473315-94473334 MsG0380017285.01.T01:CDS 50.0%
TTTAAGGGAGGAGAACGGGT+TGG + Chr3:94471754-94471773 None:intergenic 50.0%
! CGTGGGCTTTATAGAGGTGT+AGG - Chr3:94474200-94474219 MsG0380017285.01.T01:intron 50.0%
! GGAGTTCGTGGGCTTTATAG+AGG - Chr3:94474194-94474213 MsG0380017285.01.T01:intron 50.0%
! TATATTTACCGAGGGTGCGG+TGG + Chr3:94476539-94476558 None:intergenic 50.0%
! TGTCAAGTGGTGTCAAGTCG+TGG - Chr3:94472873-94472892 MsG0380017285.01.T01:intron 50.0%
!! TTTTAGCTGGCTCAGCAGCA+GGG - Chr3:94473454-94473473 MsG0380017285.01.T01:CDS 50.0%
CTTCTGTTGCGCCTCTCGAA+CGG - Chr3:94472119-94472138 MsG0380017285.01.T01:three_prime_UTR 55.0%
GGCGTTTAAGGGAGGAGAAC+GGG + Chr3:94471758-94471777 None:intergenic 55.0%
TTCTGTTGCGCCTCTCGAAC+GGG - Chr3:94472120-94472139 MsG0380017285.01.T01:three_prime_UTR 55.0%
! CAGGTTGGGAGCCTGCAAAA+TGG - Chr3:94474837-94474856 MsG0380017285.01.T01:CDS 55.0%
! TTTAGCTGGCTCAGCAGCAG+GGG - Chr3:94473455-94473474 MsG0380017285.01.T01:CDS 55.0%
!! CTTTTAGCTGGCTCAGCAGC+AGG - Chr3:94473453-94473472 MsG0380017285.01.T01:CDS 55.0%
AGGCGCACAGGAGTTTCACG+AGG - Chr3:94476399-94476418 MsG0380017285.01.T01:five_prime_UTR 60.0%
ATCTACTGCCACCGCACCCT+CGG - Chr3:94476528-94476547 MsG0380017285.01.T01:five_prime_UTR 60.0%
GGGTGGAGGCAGTTGTTTGC+AGG - Chr3:94474924-94474943 MsG0380017285.01.T01:intron 60.0%
! TTAGCTGGCTCAGCAGCAGG+GGG - Chr3:94473456-94473475 MsG0380017285.01.T01:CDS 60.0%
!! AAGGGAGGAGAACGGGTTGG+AGG + Chr3:94471751-94471770 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr3 gene 94471647 94476586 94471647 ID=MsG0380017285.01;Name=MsG0380017285.01
Chr3 mRNA 94471647 94476586 94471647 ID=MsG0380017285.01.T01;Parent=MsG0380017285.01;Name=MsG0380017285.01.T01;_AED=0.47;_eAED=0.47;_QI=333|1|1|1|1|1|6|507|343
Chr3 exon 94471647 94472255 94471647 ID=MsG0380017285.01.T01:exon:1510;Parent=MsG0380017285.01.T01
Chr3 exon 94473265 94473578 94473265 ID=MsG0380017285.01.T01:exon:1509;Parent=MsG0380017285.01.T01
Chr3 exon 94474012 94474153 94474012 ID=MsG0380017285.01.T01:exon:1508;Parent=MsG0380017285.01.T01
Chr3 exon 94474697 94474904 94474697 ID=MsG0380017285.01.T01:exon:1507;Parent=MsG0380017285.01.T01
Chr3 exon 94474992 94475077 94474992 ID=MsG0380017285.01.T01:exon:1506;Parent=MsG0380017285.01.T01
Chr3 exon 94476074 94476586 94476074 ID=MsG0380017285.01.T01:exon:1505;Parent=MsG0380017285.01.T01
Chr3 five_prime_UTR 94476254 94476586 94476254 ID=MsG0380017285.01.T01:five_prime_utr;Parent=MsG0380017285.01.T01
Chr3 CDS 94476074 94476253 94476074 ID=MsG0380017285.01.T01:cds;Parent=MsG0380017285.01.T01
Chr3 CDS 94474992 94475077 94474992 ID=MsG0380017285.01.T01:cds;Parent=MsG0380017285.01.T01
Chr3 CDS 94474697 94474904 94474697 ID=MsG0380017285.01.T01:cds;Parent=MsG0380017285.01.T01
Chr3 CDS 94474012 94474153 94474012 ID=MsG0380017285.01.T01:cds;Parent=MsG0380017285.01.T01
Chr3 CDS 94473265 94473578 94473265 ID=MsG0380017285.01.T01:cds;Parent=MsG0380017285.01.T01
Chr3 CDS 94472154 94472255 94472154 ID=MsG0380017285.01.T01:cds;Parent=MsG0380017285.01.T01
Chr3 three_prime_UTR 94471647 94472153 94471647 ID=MsG0380017285.01.T01:three_prime_utr;Parent=MsG0380017285.01.T01
Gene Sequence

>MsG0380017285.01.T01

ATGAATTCTTCTCAAGATTCTAGATTGGCTGGTTTGGTGAAAAATGCATCTATTAAGAGAGATGAATCTAGTTTCGATCGCGTTCCTGTTTATGTTAAGGAGTTAATTGCTGGTGGATTTGCTGGTGCGCTTGCTAAGACTTCTGTTGCGCCTCTCGAACGGGTTAAGATACTTTGGCAGACAAGGACCGGTGGATTTCACAATCTTGGTGTGTGCCAATCTATGAATAAGTTGCTAAAGCATGAAGGTTTTCTAGGATTATATAAAGGTAATGGAGCTAGTGTTATCCGGATTGTTCCATACGCAGCCTTGCATTTTATGACATATGAGCGGTATAAAAGTTGGATCCTGAACAATTATCCCATGTTAGGAACGGGTCCTTCTATCGATCTTTTAGCTGGCTCAGCAGCAGGGGGAACTTCAGTTTTATGTACATATCCCTTAGATCTTGCCCGTACCAAACTTGCTTATCAGGTGGTGGACACCAAAGGATGTATCAAAGATGGTATTAAAGCAGTTCATTCTCAACCTGTAGGTCCTGTACATAATGGCATTAAAGGTGTACTTACAAGTGCCTATAAAGAAGCTGGAGTTCGTGGGCTTTATAGAGGTGTAGGTCCAACCCTTACTGGAATTCTTCCATATGCTGGTTTAAAGTTCTATACGTATGAGAAGTTGAAAATGCATGTTCCTGAAGAACATCAGAAGTCCATTCTGATGCGCCTTTCTTGTGGAGCTCTTGCTGGATTGTTTGGGCAGACTTTAACATACCCTTTGGATGTTGTTAAGAGACAAATGCAGGTTGGGAGCCTGCAAAATGGAGCTAATGGAGATGCCGCATACAAAAATACATTTGATGGGCTTAGGAAGATTGTTCGAAATCAAGGGTGGAGGCAGTTGTTTGCAGGCGTAAGCATTAACTACATAAGGATTGTTCCATCAGCTGCAATTAGTTTCACCACATATGACATGATGAAGGCTTGGCTTGGTGTACCACCTCAACAAAAGTCTCGATCAGTTTCTTCAGGATAA

Protein sequence

>MsG0380017285.01.T01

MNSSQDSRLAGLVKNASIKRDESSFDRVPVYVKELIAGGFAGALAKTSVAPLERVKILWQTRTGGFHNLGVCQSMNKLLKHEGFLGLYKGNGASVIRIVPYAALHFMTYERYKSWILNNYPMLGTGPSIDLLAGSAAGGTSVLCTYPLDLARTKLAYQVVDTKGCIKDGIKAVHSQPVGPVHNGIKGVLTSAYKEAGVRGLYRGVGPTLTGILPYAGLKFYTYEKLKMHVPEEHQKSILMRLSCGALAGLFGQTLTYPLDVVKRQMQVGSLQNGANGDAAYKNTFDGLRKIVRNQGWRQLFAGVSINYIRIVPSAAISFTTYDMMKAWLGVPPQQKSRSVSSG*