Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044307.01.T01 | XP_013445471.2 | 96.284 | 592 | 19 | 2 | 1 | 592 | 1 | 589 | 0 | 1152 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044307.01.T01 | Q9SHH0 | 71.103 | 571 | 164 | 1 | 19 | 588 | 20 | 590 | 0 | 824 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044307.01.T01 | A0A396GJV2 | 96.284 | 592 | 19 | 2 | 1 | 592 | 1 | 589 | 0.0 | 1152 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0880044307.01 | MsG0880044309.01 | 0.886909 | 2.267296e-72 | 1.650696e-68 |
| MsG0880044307.01 | MsG0880044311.01 | 0.829873 | 4.034785e-55 | 4.182697e-52 |
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044307.01.T01 | MTR_8g461380 | 96.115 | 592 | 20 | 2 | 1 | 592 | 1 | 589 | 0.0 | 1149 |
| MsG0880044307.01.T01 | MTR_2g035430 | 61.179 | 577 | 217 | 2 | 22 | 591 | 14 | 590 | 0.0 | 723 |
| MsG0880044307.01.T01 | MTR_8g089320 | 50.528 | 568 | 277 | 2 | 27 | 590 | 19 | 586 | 0.0 | 586 |
| MsG0880044307.01.T01 | MTR_8g089360 | 49.559 | 567 | 284 | 2 | 28 | 593 | 8 | 573 | 0.0 | 566 |
| MsG0880044307.01.T01 | MTR_8g089360 | 49.559 | 567 | 284 | 2 | 28 | 593 | 25 | 590 | 0.0 | 565 |
| MsG0880044307.01.T01 | MTR_1g030660 | 48.658 | 559 | 282 | 3 | 37 | 594 | 24 | 578 | 0.0 | 553 |
| MsG0880044307.01.T01 | MTR_6g034535 | 85.830 | 247 | 31 | 1 | 352 | 594 | 68 | 314 | 2.25e-148 | 431 |
| MsG0880044307.01.T01 | MTR_6g034535 | 67.708 | 96 | 6 | 1 | 106 | 201 | 19 | 89 | 1.08e-28 | 117 |
| MsG0880044307.01.T01 | MTR_8g089340 | 48.832 | 428 | 217 | 2 | 157 | 582 | 1 | 428 | 8.83e-136 | 404 |
| MsG0880044307.01.T01 | MTR_1g111740 | 39.716 | 564 | 322 | 4 | 37 | 585 | 7 | 567 | 1.05e-132 | 400 |
| MsG0880044307.01.T01 | MTR_4g099270 | 38.314 | 522 | 313 | 5 | 64 | 577 | 6 | 526 | 3.24e-106 | 331 |
| MsG0880044307.01.T01 | MTR_4g099270 | 41.005 | 378 | 219 | 2 | 40 | 413 | 3 | 380 | 1.53e-88 | 280 |
| MsG0880044307.01.T01 | MTR_4g099270 | 36.145 | 415 | 256 | 5 | 171 | 577 | 1 | 414 | 4.53e-77 | 251 |
| MsG0880044307.01.T01 | MTR_4g099270 | 40.132 | 304 | 178 | 2 | 40 | 339 | 3 | 306 | 8.80e-65 | 215 |
| MsG0880044307.01.T01 | MTR_7g007850 | 31.992 | 522 | 316 | 10 | 76 | 577 | 45 | 547 | 4.12e-64 | 221 |
| MsG0880044307.01.T01 | MTR_6g027680 | 30.296 | 406 | 267 | 3 | 56 | 454 | 31 | 427 | 1.82e-61 | 214 |
| MsG0880044307.01.T01 | MTR_7g007850 | 30.699 | 544 | 324 | 11 | 76 | 577 | 45 | 577 | 2.47e-61 | 214 |
| MsG0880044307.01.T01 | MTR_6g027630 | 31.695 | 407 | 268 | 5 | 58 | 454 | 18 | 424 | 7.15e-61 | 212 |
| MsG0880044307.01.T01 | MTR_6g027630 | 31.695 | 407 | 268 | 5 | 58 | 454 | 18 | 424 | 2.43e-60 | 212 |
| MsG0880044307.01.T01 | MTR_6g027660 | 31.034 | 406 | 265 | 3 | 56 | 454 | 28 | 425 | 1.18e-59 | 210 |
| MsG0880044307.01.T01 | MTR_7g086510 | 31.675 | 382 | 254 | 3 | 80 | 454 | 38 | 419 | 4.23e-59 | 208 |
| MsG0880044307.01.T01 | MTR_6g027650 | 29.730 | 407 | 270 | 4 | 55 | 454 | 20 | 417 | 1.43e-58 | 207 |
| MsG0880044307.01.T01 | MTR_7g086610 | 30.928 | 388 | 261 | 2 | 74 | 454 | 26 | 413 | 6.55e-57 | 202 |
| MsG0880044307.01.T01 | MTR_7g007850 | 31.840 | 424 | 272 | 6 | 76 | 487 | 45 | 463 | 2.11e-55 | 195 |
| MsG0880044307.01.T01 | MTR_7g007850 | 31.840 | 424 | 272 | 6 | 76 | 487 | 45 | 463 | 2.77e-55 | 196 |
| MsG0880044307.01.T01 | MTR_6g027630 | 31.454 | 337 | 224 | 3 | 125 | 454 | 3 | 339 | 6.82e-49 | 179 |
| MsG0880044307.01.T01 | MTR_8g089342 | 56.410 | 117 | 51 | 0 | 30 | 146 | 23 | 139 | 1.42e-38 | 139 |
| MsG0880044307.01.T01 | MTR_6g027670 | 33.544 | 158 | 105 | 0 | 297 | 454 | 1 | 158 | 1.95e-25 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044307.01.T01 | AT1G17120 | 71.103 | 571 | 164 | 1 | 19 | 588 | 20 | 590 | 0.0 | 824 |
| MsG0880044307.01.T01 | AT2G34960 | 62.389 | 561 | 208 | 3 | 20 | 578 | 4 | 563 | 0.0 | 732 |
| MsG0880044307.01.T01 | AT4G21120 | 51.418 | 564 | 273 | 1 | 28 | 590 | 18 | 581 | 0.0 | 593 |
| MsG0880044307.01.T01 | AT4G21120 | 49.884 | 431 | 215 | 1 | 161 | 590 | 1 | 431 | 5.36e-148 | 434 |
| MsG0880044307.01.T01 | AT5G04770 | 40.687 | 553 | 311 | 5 | 38 | 576 | 15 | 564 | 1.25e-129 | 392 |
| MsG0880044307.01.T01 | AT3G10600 | 39.373 | 574 | 323 | 8 | 35 | 590 | 11 | 577 | 1.12e-128 | 390 |
| MsG0880044307.01.T01 | AT5G04770 | 43.490 | 384 | 207 | 2 | 38 | 411 | 15 | 398 | 5.27e-98 | 305 |
| MsG0880044307.01.T01 | AT3G10600 | 37.900 | 438 | 247 | 8 | 171 | 590 | 1 | 431 | 7.40e-90 | 285 |
| MsG0880044307.01.T01 | AT5G04770 | 38.810 | 420 | 240 | 5 | 171 | 576 | 1 | 417 | 1.26e-84 | 271 |
| MsG0880044307.01.T01 | AT1G05940 | 30.970 | 536 | 334 | 10 | 76 | 586 | 44 | 568 | 7.01e-62 | 214 |
| MsG0880044307.01.T01 | AT5G36940 | 29.730 | 407 | 279 | 3 | 55 | 454 | 4 | 410 | 4.72e-60 | 211 |
| MsG0880044307.01.T01 | AT1G58030 | 29.897 | 388 | 265 | 3 | 74 | 454 | 34 | 421 | 8.12e-58 | 205 |
| MsG0880044307.01.T01 | AT1G05940 | 31.288 | 489 | 302 | 8 | 76 | 541 | 44 | 521 | 2.58e-56 | 199 |
| MsG0880044307.01.T01 | AT1G05940 | 32.412 | 398 | 261 | 3 | 76 | 466 | 44 | 440 | 1.03e-55 | 196 |
| MsG0880044307.01.T01 | AT3G03720 | 28.536 | 403 | 279 | 4 | 60 | 454 | 4 | 405 | 1.42e-53 | 192 |
| MsG0880044307.01.T01 | AT1G05940 | 29.231 | 455 | 285 | 9 | 156 | 586 | 9 | 450 | 8.41e-45 | 165 |
Find 130 sgRNAs with CRISPR-Local
Find 170 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATATACCTATTGGTTTAAT+TGG | 0.145764 | 8:-39803703 | MsG0880044307.01.T01:CDS |
| TTCTTTCCTTACGGTGTTAA+AGG | 0.232045 | 8:-39803817 | MsG0880044307.01.T01:CDS |
| ATTAATAGGTGTTCCAGTTT+TGG | 0.242325 | 8:+39803417 | None:intergenic |
| GGCATTGGCACTTGTGAATA+TGG | 0.273952 | 8:-39803644 | MsG0880044307.01.T01:CDS |
| GGGACTGCGCTATGGAATTC+TGG | 0.274074 | 8:-39803178 | MsG0880044307.01.T01:CDS |
| GTTGTTGGTTCTTGTGTTGC+TGG | 0.281893 | 8:-39803199 | MsG0880044307.01.T01:CDS |
| GACTTAACCTGGCTTGCTTT+TGG | 0.287921 | 8:-39804360 | MsG0880044307.01.T01:CDS |
| TTTCTTGCTTTCATTGCTGC+TGG | 0.302937 | 8:-39804144 | MsG0880044307.01.T01:CDS |
| GGTGGGGATGGTTGTGGAGG+AGG | 0.309980 | 8:+39804599 | None:intergenic |
| CCAATGATCCCATGAGAAAA+AGG | 0.312755 | 8:+39803008 | None:intergenic |
| TGCGGTGGTGGGGATGGTTG+TGG | 0.314718 | 8:+39804593 | None:intergenic |
| AACAAAACCACAACGGCTAA+TGG | 0.322847 | 8:+39803979 | None:intergenic |
| GGCTTTGAAGGTGCGGTGGT+GGG | 0.323895 | 8:+39804582 | None:intergenic |
| GCACTTATTCATCCCAAAAC+TGG | 0.324146 | 8:-39803430 | MsG0880044307.01.T01:CDS |
| TTGCTTGTGAGGAGATATTA+TGG | 0.327696 | 8:-39803277 | MsG0880044307.01.T01:CDS |
| TTGTTCAAATTGGTATGAAA+TGG | 0.328124 | 8:-39803576 | MsG0880044307.01.T01:CDS |
| GGGGATGGTTGTGGAGGAGG+AGG | 0.328468 | 8:+39804602 | None:intergenic |
| AACGGTTATTTATTGTTTGA+TGG | 0.330270 | 8:-39803665 | MsG0880044307.01.T01:CDS |
| TGACAACAAGTTTGCTTGTT+GGG | 0.330599 | 8:-39803516 | MsG0880044307.01.T01:CDS |
| CTGCCGGTCTCGGTCGTTCA+TGG | 0.340474 | 8:-39804092 | MsG0880044307.01.T01:CDS |
| CTTGTTGGTGCTGCCGGTCT+CGG | 0.343843 | 8:-39804102 | MsG0880044307.01.T01:CDS |
| TGTTCAAATTGGTATGAAAT+GGG | 0.344658 | 8:-39803575 | MsG0880044307.01.T01:CDS |
| CCGGTTTGGAAAGATGGTTC+TGG | 0.347078 | 8:+39804522 | None:intergenic |
| TTTGGCGCTGTCGTCGGTTC+CGG | 0.359301 | 8:-39804342 | MsG0880044307.01.T01:CDS |
| CATGGGATCATTGGGTTATG+AGG | 0.363980 | 8:-39802999 | MsG0880044307.01.T01:CDS |
| ATTCTCCTTGAAGCTCTTGT+TGG | 0.364163 | 8:-39804117 | MsG0880044307.01.T01:CDS |
| GATGGTTGTGGAGGAGGAGG+AGG | 0.366628 | 8:+39804605 | None:intergenic |
| CTATGGAATTCTGGTTTGTT+TGG | 0.375852 | 8:-39803169 | MsG0880044307.01.T01:CDS |
| TGGCTTTGAAGGTGCGGTGG+TGG | 0.379853 | 8:+39804581 | None:intergenic |
| CCTTCAAGAGATATACCTAT+TGG | 0.381314 | 8:-39803712 | MsG0880044307.01.T01:CDS |
| GTCAAAAGTGTAGCATTAAT+AGG | 0.382938 | 8:+39803403 | None:intergenic |
| GAAGAGGCAACCAAAGGTTT+GGG | 0.387706 | 8:-39803077 | MsG0880044307.01.T01:CDS |
| ACCTTTGGTTGCCTCTTCTT+CGG | 0.388733 | 8:+39803082 | None:intergenic |
| TCTGGTTTGTTTGGTTGGAT+TGG | 0.392722 | 8:-39803160 | MsG0880044307.01.T01:CDS |
| GGAATTCTGGTTTGTTTGGT+TGG | 0.396442 | 8:-39803165 | MsG0880044307.01.T01:CDS |
| AAGTTTGCTTGTTGGGTCAA+TGG | 0.398278 | 8:-39803509 | MsG0880044307.01.T01:CDS |
| AGAAGAGGCAACCAAAGGTT+TGG | 0.405906 | 8:-39803078 | MsG0880044307.01.T01:CDS |
| GCCGTTGAAGTTCCCGTCGC+TGG | 0.406958 | 8:-39804204 | MsG0880044307.01.T01:CDS |
| TATGATGTGGATCATGAAAT+TGG | 0.407553 | 8:-39802905 | MsG0880044307.01.T01:CDS |
| CAGTAGCTTCGTGGCTTTGA+AGG | 0.407913 | 8:+39804570 | None:intergenic |
| TTTAGATTCTTGATTTGCAC+TGG | 0.411839 | 8:-39802971 | MsG0880044307.01.T01:CDS |
| TCACTTGGTGGGACTTAACC+TGG | 0.412491 | 8:-39804371 | MsG0880044307.01.T01:CDS |
| ACGCTGCAGCTGTCGTGTAT+TGG | 0.414985 | 8:-39803786 | MsG0880044307.01.T01:CDS |
| TATTTATTGTTTGATGGCAT+TGG | 0.415152 | 8:-39803659 | MsG0880044307.01.T01:CDS |
| CTCCATCGCCAGTAGCTTCG+TGG | 0.417828 | 8:+39804561 | None:intergenic |
| AGTTTGCTTGTTGGGTCAAT+GGG | 0.420169 | 8:-39803508 | MsG0880044307.01.T01:CDS |
| ATTGAACCAATTAAACCAAT+AGG | 0.426832 | 8:+39803697 | None:intergenic |
| CCAATAGGTATATCTCTTGA+AGG | 0.429939 | 8:+39803712 | None:intergenic |
| TTGTTGGTTCTTGTGTTGCT+GGG | 0.430117 | 8:-39803198 | MsG0880044307.01.T01:CDS |
| TTCTTGCTTTCATTGCTGCT+GGG | 0.430448 | 8:-39804143 | MsG0880044307.01.T01:CDS |
| TTAACACCGTTCTTTCCTTA+CGG | 0.430663 | 8:-39803826 | MsG0880044307.01.T01:CDS |
| CCAGAACCATCTTTCCAAAC+CGG | 0.431612 | 8:-39804522 | MsG0880044307.01.T01:CDS |
| TGAAGGTGCGGTGGTGGGGA+TGG | 0.431688 | 8:+39804587 | None:intergenic |
| ATTCTCTCCTATGCAGCGTC+AGG | 0.432906 | 8:-39804267 | MsG0880044307.01.T01:CDS |
| ATACCGTGGCTGCTTGTGTT+TGG | 0.437593 | 8:-39803135 | MsG0880044307.01.T01:CDS |
| GGTGGTGGGGATGGTTGTGG+AGG | 0.440644 | 8:+39804596 | None:intergenic |
| CAACAAATAGGGCTAAACTA+TGG | 0.448577 | 8:+39802847 | None:intergenic |
| TGCTTGTGAGGAGATATTAT+GGG | 0.457451 | 8:-39803276 | MsG0880044307.01.T01:CDS |
| GAAGCTCTTGTTGGTGCTGC+CGG | 0.460471 | 8:-39804108 | MsG0880044307.01.T01:CDS |
| CACAATGATAAAGAACGATT+CGG | 0.464761 | 8:-39804055 | MsG0880044307.01.T01:CDS |
| CCATGACTCGTTGCCTCACT+TGG | 0.465548 | 8:-39804386 | MsG0880044307.01.T01:CDS |
| TGGTTCAATGTCTATGATAA+CGG | 0.465812 | 8:-39803683 | MsG0880044307.01.T01:CDS |
| CGCTGCATAGGAGAGAATAA+TGG | 0.467239 | 8:+39804272 | None:intergenic |
| GCTTTGAAGGTGCGGTGGTG+GGG | 0.472654 | 8:+39804583 | None:intergenic |
| TGACTCGTTGCCTCACTTGG+TGG | 0.477289 | 8:-39804383 | MsG0880044307.01.T01:CDS |
| GAGAGTCTGTTGATCGGTTG+AGG | 0.481012 | 8:+39804445 | None:intergenic |
| GTCGTGTATTGGTCTTATAC+CGG | 0.481654 | 8:-39803775 | MsG0880044307.01.T01:CDS |
| TCCGGTATCTTCGTCGTCAC+CGG | 0.482639 | 8:-39804324 | MsG0880044307.01.T01:CDS |
| ACCGGTGACGACGAAGATAC+CGG | 0.483231 | 8:+39804323 | None:intergenic |
| CACCTTCCATTCTCTCATCA+CGG | 0.484892 | 8:+39802870 | None:intergenic |
| GACTCGTTGCCTCACTTGGT+GGG | 0.485706 | 8:-39804382 | MsG0880044307.01.T01:CDS |
| ATGACAACAAGTTTGCTTGT+TGG | 0.486739 | 8:-39803517 | MsG0880044307.01.T01:CDS |
| ATCAAACCGTGATGAGAGAA+TGG | 0.490209 | 8:-39802876 | MsG0880044307.01.T01:CDS |
| CTTCAAAGCCACGAAGCTAC+TGG | 0.495668 | 8:-39804569 | MsG0880044307.01.T01:CDS |
| AGTTGCAACCATATCAAAAC+CGG | 0.498318 | 8:+39803756 | None:intergenic |
| CGAATCGTTCTTTATCATTG+TGG | 0.500875 | 8:+39804056 | None:intergenic |
| CAAGAAGCTCGTTTCAATGC+TGG | 0.502149 | 8:-39804300 | MsG0880044307.01.T01:CDS |
| GTGAGTATTTGTGCTTTGAA+AGG | 0.502564 | 8:-39803541 | MsG0880044307.01.T01:CDS |
| CAGCACCAACAAGAGCTTCA+AGG | 0.507060 | 8:+39804112 | None:intergenic |
| AGAAAACGAGCCACCAGCGA+CGG | 0.513871 | 8:+39804191 | None:intergenic |
| GTTTGCTAAGGCGGTTCGAT+AGG | 0.515786 | 8:+39804494 | None:intergenic |
| GAAAACGAGCCACCAGCGAC+GGG | 0.517113 | 8:+39804192 | None:intergenic |
| CTGTTGATCGGTTGAGGAGA+CGG | 0.523901 | 8:+39804451 | None:intergenic |
| AAAACACCTTTAACACCGTA+AGG | 0.526823 | 8:+39803811 | None:intergenic |
| GTTCAAATTGGTATGAAATG+GGG | 0.527507 | 8:-39803574 | MsG0880044307.01.T01:CDS |
| GACAGCGCCAAAAGCAAGCC+AGG | 0.528955 | 8:+39804353 | None:intergenic |
| CCAAGTGAGGCAACGAGTCA+TGG | 0.533379 | 8:+39804386 | None:intergenic |
| GCTTGATCCATTAGCCGTTG+TGG | 0.536314 | 8:-39803986 | MsG0880044307.01.T01:CDS |
| ACGTGGGCAGGTGTTTGCTA+AGG | 0.538243 | 8:+39804482 | None:intergenic |
| AGAGAAACCTGACGCTGCAT+AGG | 0.539280 | 8:+39804260 | None:intergenic |
| TGACCATGAACGACCGAGAC+CGG | 0.540172 | 8:+39804089 | None:intergenic |
| TGGCTATTGCATTGCTTGTG+AGG | 0.541304 | 8:-39803288 | MsG0880044307.01.T01:CDS |
| GTGTTGCTGGGACTGCGCTA+TGG | 0.541923 | 8:-39803186 | MsG0880044307.01.T01:CDS |
| ATTGAAACGAGCTTCTTGAC+CGG | 0.547155 | 8:+39804305 | None:intergenic |
| TGGGCAGGTGTTTGCTAAGG+CGG | 0.548053 | 8:+39804485 | None:intergenic |
| TGAGTTTGCTTCCGAAGAAG+AGG | 0.551130 | 8:-39803093 | MsG0880044307.01.T01:CDS |
| GGAGGATGTCGGTGGTGTCA+TGG | 0.553029 | 8:+39804623 | None:intergenic |
| TTGGGTCAATGGGACAAGCT+AGG | 0.554068 | 8:-39803498 | MsG0880044307.01.T01:CDS |
| ACTAACGGAATCGCGGCTAG+TGG | 0.559727 | 8:-39803952 | MsG0880044307.01.T01:CDS |
| GTTGAAGTTCCCGTCGCTGG+TGG | 0.562608 | 8:-39804201 | MsG0880044307.01.T01:CDS |
| CAACGGATAAGAGTGATTTG+TGG | 0.572032 | 8:-39803246 | MsG0880044307.01.T01:CDS |
| AAGAGGCAACCAAAGGTTTG+GGG | 0.576079 | 8:-39803076 | MsG0880044307.01.T01:CDS |
| AGCCACGAAGCTACTGGCGA+TGG | 0.577541 | 8:-39804563 | MsG0880044307.01.T01:CDS |
| CAATAGGTATATCTCTTGAA+GGG | 0.579389 | 8:+39803713 | None:intergenic |
| AGAGGCAACCAAAGGTTTGG+GGG | 0.584028 | 8:-39803075 | MsG0880044307.01.T01:CDS |
| GAGGAGGAGGAGGATGTCGG+TGG | 0.585848 | 8:+39804615 | None:intergenic |
| ACCAGCGACGGGAACTTCAA+CGG | 0.587595 | 8:+39804203 | None:intergenic |
| TCCGAAGAAGAGGCAACCAA+AGG | 0.591614 | 8:-39803083 | MsG0880044307.01.T01:CDS |
| GCTTCGTGGCTTTGAAGGTG+CGG | 0.594338 | 8:+39804575 | None:intergenic |
| AAGTATAGTGAGATTGATGC+TGG | 0.595966 | 8:-39803619 | MsG0880044307.01.T01:CDS |
| GGATAAGAGTGATTTGTGGA+AGG | 0.603211 | 8:-39803242 | MsG0880044307.01.T01:CDS |
| ATCGACAGTGATGGCACCCA+CGG | 0.605291 | 8:+39803040 | None:intergenic |
| ATATTATGGGAGGGAATCAA+CGG | 0.605663 | 8:-39803263 | MsG0880044307.01.T01:CDS |
| AACCGTGATGAGAGAATGGA+AGG | 0.606006 | 8:-39802872 | MsG0880044307.01.T01:CDS |
| AAACCAAACACAAGCAGCCA+CGG | 0.609702 | 8:+39803132 | None:intergenic |
| GATGGCACCCACGGAACCAA+CGG | 0.610206 | 8:+39803049 | None:intergenic |
| AGGTTAAGTCCCACCAAGTG+AGG | 0.616937 | 8:+39804373 | None:intergenic |
| TGTGAGGAGATATTATGGGA+GGG | 0.620522 | 8:-39803272 | MsG0880044307.01.T01:CDS |
| TCGTGGCTTTGAAGGTGCGG+TGG | 0.632893 | 8:+39804578 | None:intergenic |
| TTGTGAGGAGATATTATGGG+AGG | 0.634083 | 8:-39803273 | MsG0880044307.01.T01:CDS |
| GTTAATCACTAACGGAATCG+CGG | 0.635124 | 8:-39803959 | MsG0880044307.01.T01:CDS |
| GTTCATGAGAGTCTGTTGAT+CGG | 0.635369 | 8:+39804439 | None:intergenic |
| GGTACACTACTCAAATTGCA+AGG | 0.653655 | 8:-39803477 | MsG0880044307.01.T01:CDS |
| TTAACACCGTAAGGAAAGAA+CGG | 0.656749 | 8:+39803820 | None:intergenic |
| TTCGTCGCAATCGACAGTGA+TGG | 0.657991 | 8:+39803031 | None:intergenic |
| GAGGCAACCAAAGGTTTGGG+GGG | 0.658204 | 8:-39803074 | MsG0880044307.01.T01:CDS |
| TGTTCATGCAACTTATGATG+TGG | 0.672047 | 8:-39802918 | MsG0880044307.01.T01:CDS |
| GCATAGGAGAGAATAATGGA+AGG | 0.678902 | 8:+39804276 | None:intergenic |
| TGGTTGGATTGGTTATACCG+TGG | 0.704461 | 8:-39803149 | MsG0880044307.01.T01:CDS |
| AGTGATTAACAAAACCACAA+CGG | 0.729960 | 8:+39803972 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTGTTACAACTTTTATTAT+CGG | - | Chr8:39803588-39803607 | MsG0880044307.01.T01:CDS | 15.0% |
| !!! | CTTTTGTATTATTTATTTGT+GGG | - | Chr8:39804539-39804558 | MsG0880044307.01.T01:CDS | 15.0% |
| !!! | GCTTTTGTATTATTTATTTG+TGG | - | Chr8:39804538-39804557 | MsG0880044307.01.T01:CDS | 20.0% |
| !!! | TCTTTTCATTTTTATGCTTA+TGG | - | Chr8:39804172-39804191 | MsG0880044307.01.T01:CDS | 20.0% |
| ! | AACGGTTATTTATTGTTTGA+TGG | - | Chr8:39803815-39803834 | MsG0880044307.01.T01:CDS | 25.0% |
| ! | ATTGAACCAATTAAACCAAT+AGG | + | Chr8:39803786-39803805 | None:intergenic | 25.0% |
| ! | GAAAAACATCTATCTTAACA+TGG | - | Chr8:39803556-39803575 | MsG0880044307.01.T01:CDS | 25.0% |
| ! | TGTTCAAATTGGTATGAAAT+GGG | - | Chr8:39803905-39803924 | MsG0880044307.01.T01:CDS | 25.0% |
| ! | TTGTTCAAATTGGTATGAAA+TGG | - | Chr8:39803904-39803923 | MsG0880044307.01.T01:CDS | 25.0% |
| !! | TATTTATTGTTTGATGGCAT+TGG | - | Chr8:39803821-39803840 | MsG0880044307.01.T01:CDS | 25.0% |
| !!! | AGAATCGATTCTTTTAAAAC+AGG | - | Chr8:39803462-39803481 | MsG0880044307.01.T01:CDS | 25.0% |
| !!! | ATCGGTTTTATTATTGTGAT+CGG | - | Chr8:39803606-39803625 | MsG0880044307.01.T01:CDS | 25.0% |
| !!! | GATATACCTATTGGTTTAAT+TGG | - | Chr8:39803777-39803796 | MsG0880044307.01.T01:CDS | 25.0% |
| !!! | TCTTTTCTAAGAATTGAACT+CGG | - | Chr8:39803309-39803328 | MsG0880044307.01.T01:CDS | 25.0% |
| !!! | TTGTGTTTGTTTTTTGTTGT+TGG | - | Chr8:39804266-39804285 | MsG0880044307.01.T01:CDS | 25.0% |
| AGTGATTAACAAAACCACAA+CGG | + | Chr8:39803511-39803530 | None:intergenic | 30.0% | |
| CAATAGGTATATCTCTTGAA+GGG | + | Chr8:39803770-39803789 | None:intergenic | 30.0% | |
| CACAATGATAAAGAACGATT+CGG | - | Chr8:39803425-39803444 | MsG0880044307.01.T01:CDS | 30.0% | |
| GGATGAATAAGTGCAAAAAA+GGG | + | Chr8:39804044-39804063 | None:intergenic | 30.0% | |
| GTTCAAATTGGTATGAAATG+GGG | - | Chr8:39803906-39803925 | MsG0880044307.01.T01:CDS | 30.0% | |
| TATGATGTGGATCATGAAAT+TGG | - | Chr8:39804575-39804594 | MsG0880044307.01.T01:CDS | 30.0% | |
| TGGTTCAATGTCTATGATAA+CGG | - | Chr8:39803797-39803816 | MsG0880044307.01.T01:CDS | 30.0% | |
| ! | ATTAATAGGTGTTCCAGTTT+TGG | + | Chr8:39804066-39804085 | None:intergenic | 30.0% |
| ! | GTCAAAAGTGTAGCATTAAT+AGG | + | Chr8:39804080-39804099 | None:intergenic | 30.0% |
| ! | TGTTGCTCTTTTTACTAGTT+TGG | - | Chr8:39804118-39804137 | MsG0880044307.01.T01:CDS | 30.0% |
| ! | TTAATAGGTGTTCCAGTTTT+GGG | + | Chr8:39804065-39804084 | None:intergenic | 30.0% |
| ! | TTTTGATATGGTTGCAACTA+TGG | - | Chr8:39803728-39803747 | MsG0880044307.01.T01:CDS | 30.0% |
| !! | AGAACGATTCGGATTATTTT+CGG | - | Chr8:39803436-39803455 | MsG0880044307.01.T01:CDS | 30.0% |
| !! | ATTGTGATCGGTTTTATACA+TGG | - | Chr8:39803618-39803637 | MsG0880044307.01.T01:CDS | 30.0% |
| !! | TTTAGATTCTTGATTTGCAC+TGG | - | Chr8:39804509-39804528 | MsG0880044307.01.T01:CDS | 30.0% |
| !!! | GTGGTTTTGTTAATCACTAA+CGG | - | Chr8:39803513-39803532 | MsG0880044307.01.T01:CDS | 30.0% |
| !!! | TCAGTTGCTTTTGTTCAAAT+TGG | - | Chr8:39803894-39803913 | MsG0880044307.01.T01:CDS | 30.0% |
| AAAACACCTTTAACACCGTA+AGG | + | Chr8:39803672-39803691 | None:intergenic | 35.0% | |
| AAGTATAGTGAGATTGATGC+TGG | - | Chr8:39803861-39803880 | MsG0880044307.01.T01:CDS | 35.0% | |
| AGTTGCAACCATATCAAAAC+CGG | + | Chr8:39803727-39803746 | None:intergenic | 35.0% | |
| ATATTATGGGAGGGAATCAA+CGG | - | Chr8:39804217-39804236 | MsG0880044307.01.T01:CDS | 35.0% | |
| CCAATAGGTATATCTCTTGA+AGG | + | Chr8:39803771-39803790 | None:intergenic | 35.0% | |
| CCTTCAAGAGATATACCTAT+TGG | - | Chr8:39803768-39803787 | MsG0880044307.01.T01:CDS | 35.0% | |
| CGAATCGTTCTTTATCATTG+TGG | + | Chr8:39803427-39803446 | None:intergenic | 35.0% | |
| GGGATGAATAAGTGCAAAAA+AGG | + | Chr8:39804045-39804064 | None:intergenic | 35.0% | |
| TGAATAAGTGCAAAAAAGGG+TGG | + | Chr8:39804041-39804060 | None:intergenic | 35.0% | |
| TGCTTGTGAGGAGATATTAT+GGG | - | Chr8:39804204-39804223 | MsG0880044307.01.T01:CDS | 35.0% | |
| TGTTCATGCAACTTATGATG+TGG | - | Chr8:39804562-39804581 | MsG0880044307.01.T01:CDS | 35.0% | |
| TTAACACCGTAAGGAAAGAA+CGG | + | Chr8:39803663-39803682 | None:intergenic | 35.0% | |
| TTAACACCGTTCTTTCCTTA+CGG | - | Chr8:39803654-39803673 | MsG0880044307.01.T01:CDS | 35.0% | |
| TTGCTTGTGAGGAGATATTA+TGG | - | Chr8:39804203-39804222 | MsG0880044307.01.T01:CDS | 35.0% | |
| ! | ATGACAACAAGTTTGCTTGT+TGG | - | Chr8:39803963-39803982 | MsG0880044307.01.T01:CDS | 35.0% |
| ! | CTTTTTCTCATGGGATCATT+GGG | - | Chr8:39804473-39804492 | MsG0880044307.01.T01:CDS | 35.0% |
| ! | GTGAGTATTTGTGCTTTGAA+AGG | - | Chr8:39803939-39803958 | MsG0880044307.01.T01:CDS | 35.0% |
| ! | TGACAACAAGTTTGCTTGTT+GGG | - | Chr8:39803964-39803983 | MsG0880044307.01.T01:CDS | 35.0% |
| ! | TTCTTTCCTTACGGTGTTAA+AGG | - | Chr8:39803663-39803682 | MsG0880044307.01.T01:CDS | 35.0% |
| !! | CTATGGAATTCTGGTTTGTT+TGG | - | Chr8:39804311-39804330 | MsG0880044307.01.T01:CDS | 35.0% |
| !!! | ATGGTATTTTCACTGGCTTT+GGG | + | Chr8:39803078-39803097 | None:intergenic | 35.0% |
| !!! | GTCTTATACCGGTTTTGATA+TGG | - | Chr8:39803716-39803735 | MsG0880044307.01.T01:CDS | 35.0% |
| AACAAAACCACAACGGCTAA+TGG | + | Chr8:39803504-39803523 | None:intergenic | 40.0% | |
| ATCAAACCGTGATGAGAGAA+TGG | - | Chr8:39804604-39804623 | MsG0880044307.01.T01:CDS | 40.0% | |
| ATTCTCCTTGAAGCTCTTGT+TGG | - | Chr8:39803363-39803382 | MsG0880044307.01.T01:CDS | 40.0% | |
| ATTGAAACGAGCTTCTTGAC+CGG | + | Chr8:39803178-39803197 | None:intergenic | 40.0% | |
| CAACGGATAAGAGTGATTTG+TGG | - | Chr8:39804234-39804253 | MsG0880044307.01.T01:CDS | 40.0% | |
| CCAATGATCCCATGAGAAAA+AGG | + | Chr8:39804475-39804494 | None:intergenic | 40.0% | |
| GCACTTATTCATCCCAAAAC+TGG | - | Chr8:39804050-39804069 | MsG0880044307.01.T01:CDS | 40.0% | |
| GGTACACTACTCAAATTGCA+AGG | - | Chr8:39804003-39804022 | MsG0880044307.01.T01:CDS | 40.0% | |
| GTTAATCACTAACGGAATCG+CGG | - | Chr8:39803521-39803540 | MsG0880044307.01.T01:CDS | 40.0% | |
| GTTCATGAGAGTCTGTTGAT+CGG | + | Chr8:39803044-39803063 | None:intergenic | 40.0% | |
| TGTGAGGAGATATTATGGGA+GGG | - | Chr8:39804208-39804227 | MsG0880044307.01.T01:CDS | 40.0% | |
| TTCTTGCTTTCATTGCTGCT+GGG | - | Chr8:39803337-39803356 | MsG0880044307.01.T01:CDS | 40.0% | |
| TTGTGAGGAGATATTATGGG+AGG | - | Chr8:39804207-39804226 | MsG0880044307.01.T01:CDS | 40.0% | |
| TTTCTTGCTTTCATTGCTGC+TGG | - | Chr8:39803336-39803355 | MsG0880044307.01.T01:CDS | 40.0% | |
| ! | AAGTTTGCTTGTTGGGTCAA+TGG | - | Chr8:39803971-39803990 | MsG0880044307.01.T01:CDS | 40.0% |
| ! | ACGAGTCATGGTATTTTCAC+TGG | + | Chr8:39803085-39803104 | None:intergenic | 40.0% |
| ! | AGTTTGCTTGTTGGGTCAAT+GGG | - | Chr8:39803972-39803991 | MsG0880044307.01.T01:CDS | 40.0% |
| ! | CCTTTTTCTCATGGGATCAT+TGG | - | Chr8:39804472-39804491 | MsG0880044307.01.T01:CDS | 40.0% |
| ! | GCATAGGAGAGAATAATGGA+AGG | + | Chr8:39803207-39803226 | None:intergenic | 40.0% |
| ! | GGATAAGAGTGATTTGTGGA+AGG | - | Chr8:39804238-39804257 | MsG0880044307.01.T01:CDS | 40.0% |
| ! | TTCGATAGGTTTTTCCGGTT+TGG | + | Chr8:39802975-39802994 | None:intergenic | 40.0% |
| !! | GGAATTCTGGTTTGTTTGGT+TGG | - | Chr8:39804315-39804334 | MsG0880044307.01.T01:CDS | 40.0% |
| !! | GTCGTGTATTGGTCTTATAC+CGG | - | Chr8:39803705-39803724 | MsG0880044307.01.T01:CDS | 40.0% |
| !! | TCTGGTTTGTTTGGTTGGAT+TGG | - | Chr8:39804320-39804339 | MsG0880044307.01.T01:CDS | 40.0% |
| !! | TTGTTGGTTCTTGTGTTGCT+GGG | - | Chr8:39804282-39804301 | MsG0880044307.01.T01:CDS | 40.0% |
| !!! | CATGGTATTTTCACTGGCTT+TGG | + | Chr8:39803079-39803098 | None:intergenic | 40.0% |
| !!! | GTTTTTCCGGTTTGGAAAGA+TGG | + | Chr8:39802967-39802986 | None:intergenic | 40.0% |
| !!! | TATTTTCACTGGCTTTGGGA+AGG | + | Chr8:39803074-39803093 | None:intergenic | 40.0% |
| !!! | TGTTTGGTTTTTGGCGACTT+TGG | - | Chr8:39804361-39804380 | MsG0880044307.01.T01:CDS | 40.0% |
| AAACCAAACACAAGCAGCCA+CGG | + | Chr8:39804351-39804370 | None:intergenic | 45.0% | |
| AACCGTGATGAGAGAATGGA+AGG | - | Chr8:39804608-39804627 | MsG0880044307.01.T01:CDS | 45.0% | |
| AAGAGGCAACCAAAGGTTTG+GGG | - | Chr8:39804404-39804423 | MsG0880044307.01.T01:CDS | 45.0% | |
| ACCTTTGGTTGCCTCTTCTT+CGG | + | Chr8:39804401-39804420 | None:intergenic | 45.0% | |
| AGAAGAGGCAACCAAAGGTT+TGG | - | Chr8:39804402-39804421 | MsG0880044307.01.T01:CDS | 45.0% | |
| CAAGAAGCTCGTTTCAATGC+TGG | - | Chr8:39803180-39803199 | MsG0880044307.01.T01:CDS | 45.0% | |
| CACCTTCCATTCTCTCATCA+CGG | + | Chr8:39804613-39804632 | None:intergenic | 45.0% | |
| CATGGGATCATTGGGTTATG+AGG | - | Chr8:39804481-39804500 | MsG0880044307.01.T01:CDS | 45.0% | |
| CCAGAACCATCTTTCCAAAC+CGG | - | Chr8:39802958-39802977 | MsG0880044307.01.T01:CDS | 45.0% | |
| CGCTGCATAGGAGAGAATAA+TGG | + | Chr8:39803211-39803230 | None:intergenic | 45.0% | |
| GAAGAGGCAACCAAAGGTTT+GGG | - | Chr8:39804403-39804422 | MsG0880044307.01.T01:CDS | 45.0% | |
| TGGCTATTGCATTGCTTGTG+AGG | - | Chr8:39804192-39804211 | MsG0880044307.01.T01:CDS | 45.0% | |
| ! | GCGACGAACCTTTTTCTCAT+GGG | - | Chr8:39804464-39804483 | MsG0880044307.01.T01:CDS | 45.0% |
| ! | TGAGTTTGCTTCCGAAGAAG+AGG | - | Chr8:39804387-39804406 | MsG0880044307.01.T01:CDS | 45.0% |
| ! | TGCGACGAACCTTTTTCTCA+TGG | - | Chr8:39804463-39804482 | MsG0880044307.01.T01:CDS | 45.0% |
| !! | GGCATTGGCACTTGTGAATA+TGG | - | Chr8:39803836-39803855 | MsG0880044307.01.T01:CDS | 45.0% |
| !! | GTTGTTGGTTCTTGTGTTGC+TGG | - | Chr8:39804281-39804300 | MsG0880044307.01.T01:CDS | 45.0% |
| !! | TGGTTGGATTGGTTATACCG+TGG | - | Chr8:39804331-39804350 | MsG0880044307.01.T01:CDS | 45.0% |
| !!! | GACTTAACCTGGCTTGCTTT+TGG | - | Chr8:39803120-39803139 | MsG0880044307.01.T01:CDS | 45.0% |
| !!! | GGCTGCTTGTGTTTGGTTTT+TGG | - | Chr8:39804352-39804371 | MsG0880044307.01.T01:CDS | 45.0% |
| AGAGAAACCTGACGCTGCAT+AGG | + | Chr8:39803223-39803242 | None:intergenic | 50.0% | |
| AGAGGCAACCAAAGGTTTGG+GGG | - | Chr8:39804405-39804424 | MsG0880044307.01.T01:CDS | 50.0% | |
| AGGTTAAGTCCCACCAAGTG+AGG | + | Chr8:39803110-39803129 | None:intergenic | 50.0% | |
| ATACCGTGGCTGCTTGTGTT+TGG | - | Chr8:39804345-39804364 | MsG0880044307.01.T01:CDS | 50.0% | |
| ATTCTCTCCTATGCAGCGTC+AGG | - | Chr8:39803213-39803232 | MsG0880044307.01.T01:CDS | 50.0% | |
| CAGCACCAACAAGAGCTTCA+AGG | + | Chr8:39803371-39803390 | None:intergenic | 50.0% | |
| CTGTTGATCGGTTGAGGAGA+CGG | + | Chr8:39803032-39803051 | None:intergenic | 50.0% | |
| CTTCAAAGCCACGAAGCTAC+TGG | - | Chr8:39802911-39802930 | MsG0880044307.01.T01:CDS | 50.0% | |
| GAGAGTCTGTTGATCGGTTG+AGG | + | Chr8:39803038-39803057 | None:intergenic | 50.0% | |
| GCTTGATCCATTAGCCGTTG+TGG | - | Chr8:39803494-39803513 | MsG0880044307.01.T01:CDS | 50.0% | |
| TCCGAAGAAGAGGCAACCAA+AGG | - | Chr8:39804397-39804416 | MsG0880044307.01.T01:CDS | 50.0% | |
| TTCGTCGCAATCGACAGTGA+TGG | + | Chr8:39804452-39804471 | None:intergenic | 50.0% | |
| TTGGGTCAATGGGACAAGCT+AGG | - | Chr8:39803982-39804001 | MsG0880044307.01.T01:CDS | 50.0% | |
| ! | AGGAGACGGTCTTTTAGACG+TGG | + | Chr8:39803018-39803037 | None:intergenic | 50.0% |
| ! | GGAGACGGTCTTTTAGACGT+GGG | + | Chr8:39803017-39803036 | None:intergenic | 50.0% |
| ! | GGCGGTTCGATAGGTTTTTC+CGG | + | Chr8:39802980-39802999 | None:intergenic | 50.0% |
| ! | GTTTGCTAAGGCGGTTCGAT+AGG | + | Chr8:39802989-39803008 | None:intergenic | 50.0% |
| ! | TCACTTGGTGGGACTTAACC+TGG | - | Chr8:39803109-39803128 | MsG0880044307.01.T01:CDS | 50.0% |
| !! | CAGTAGCTTCGTGGCTTTGA+AGG | + | Chr8:39802913-39802932 | None:intergenic | 50.0% |
| !! | CCGGTTTGGAAAGATGGTTC+TGG | + | Chr8:39802961-39802980 | None:intergenic | 50.0% |
| AAAGGTTTGGGGGGTTCCGT+TGG | - | Chr8:39804415-39804434 | MsG0880044307.01.T01:CDS | 55.0% | |
| AACGGAACCCCCCAAACCTT+TGG | + | Chr8:39804416-39804435 | None:intergenic | 55.0% | |
| ACCAGCGACGGGAACTTCAA+CGG | + | Chr8:39803280-39803299 | None:intergenic | 55.0% | |
| ACCGGTGACGACGAAGATAC+CGG | + | Chr8:39803160-39803179 | None:intergenic | 55.0% | |
| ACGCTGCAGCTGTCGTGTAT+TGG | - | Chr8:39803694-39803713 | MsG0880044307.01.T01:CDS | 55.0% | |
| ACTAACGGAATCGCGGCTAG+TGG | - | Chr8:39803528-39803547 | MsG0880044307.01.T01:CDS | 55.0% | |
| AGAAAACGAGCCACCAGCGA+CGG | + | Chr8:39803292-39803311 | None:intergenic | 55.0% | |
| ATCGACAGTGATGGCACCCA+CGG | + | Chr8:39804443-39804462 | None:intergenic | 55.0% | |
| CCAAGTGAGGCAACGAGTCA+TGG | + | Chr8:39803097-39803116 | None:intergenic | 55.0% | |
| CCATGACTCGTTGCCTCACT+TGG | - | Chr8:39803094-39803113 | MsG0880044307.01.T01:CDS | 55.0% | |
| GACTCGTTGCCTCACTTGGT+GGG | - | Chr8:39803098-39803117 | MsG0880044307.01.T01:CDS | 55.0% | |
| GAGGCAACCAAAGGTTTGGG+GGG | - | Chr8:39804406-39804425 | MsG0880044307.01.T01:CDS | 55.0% | |
| GGGACTGCGCTATGGAATTC+TGG | - | Chr8:39804302-39804321 | MsG0880044307.01.T01:CDS | 55.0% | |
| TCCGGTATCTTCGTCGTCAC+CGG | - | Chr8:39803156-39803175 | MsG0880044307.01.T01:CDS | 55.0% | |
| TGACCATGAACGACCGAGAC+CGG | + | Chr8:39803394-39803413 | None:intergenic | 55.0% | |
| TGACTCGTTGCCTCACTTGG+TGG | - | Chr8:39803097-39803116 | MsG0880044307.01.T01:CDS | 55.0% | |
| ! | ACGGTCTTTTAGACGTGGGC+AGG | + | Chr8:39803013-39803032 | None:intergenic | 55.0% |
| ! | ACGTGGGCAGGTGTTTGCTA+AGG | + | Chr8:39803001-39803020 | None:intergenic | 55.0% |
| ! | TGGGCAGGTGTTTGCTAAGG+CGG | + | Chr8:39802998-39803017 | None:intergenic | 55.0% |
| !! | CTTGCTTTTGGCGCTGTCGT+CGG | - | Chr8:39803132-39803151 | MsG0880044307.01.T01:CDS | 55.0% |
| !! | GAAGCTCTTGTTGGTGCTGC+CGG | - | Chr8:39803372-39803391 | MsG0880044307.01.T01:CDS | 55.0% |
| !! | GCTTCGTGGCTTTGAAGGTG+CGG | + | Chr8:39802908-39802927 | None:intergenic | 55.0% |
| AGCCACGAAGCTACTGGCGA+TGG | - | Chr8:39802917-39802936 | MsG0880044307.01.T01:CDS | 60.0% | |
| CTCCATCGCCAGTAGCTTCG+TGG | + | Chr8:39802922-39802941 | None:intergenic | 60.0% | |
| GAAAACGAGCCACCAGCGAC+GGG | + | Chr8:39803291-39803310 | None:intergenic | 60.0% | |
| GACAGCGCCAAAAGCAAGCC+AGG | + | Chr8:39803130-39803149 | None:intergenic | 60.0% | |
| GATGGCACCCACGGAACCAA+CGG | + | Chr8:39804434-39804453 | None:intergenic | 60.0% | |
| GATGGTTGTGGAGGAGGAGG+AGG | + | Chr8:39802878-39802897 | None:intergenic | 60.0% | |
| GTGGAGGAGGAGGAGGATGT+CGG | + | Chr8:39802871-39802890 | None:intergenic | 60.0% | |
| GTTGAAGTTCCCGTCGCTGG+TGG | - | Chr8:39803279-39803298 | MsG0880044307.01.T01:CDS | 60.0% | |
| ! | GTGTTGCTGGGACTGCGCTA+TGG | - | Chr8:39804294-39804313 | MsG0880044307.01.T01:CDS | 60.0% |
| !! | CTTGTTGGTGCTGCCGGTCT+CGG | - | Chr8:39803378-39803397 | MsG0880044307.01.T01:CDS | 60.0% |
| !! | GCTTTGAAGGTGCGGTGGTG+GGG | + | Chr8:39802900-39802919 | None:intergenic | 60.0% |
| !! | GGCTTTGAAGGTGCGGTGGT+GGG | + | Chr8:39802901-39802920 | None:intergenic | 60.0% |
| !! | TCGTGGCTTTGAAGGTGCGG+TGG | + | Chr8:39802905-39802924 | None:intergenic | 60.0% |
| !! | TGGCTTTGAAGGTGCGGTGG+TGG | + | Chr8:39802902-39802921 | None:intergenic | 60.0% |
| !! | TTTGGCGCTGTCGTCGGTTC+CGG | - | Chr8:39803138-39803157 | MsG0880044307.01.T01:CDS | 60.0% |
| CTGCCGGTCTCGGTCGTTCA+TGG | - | Chr8:39803388-39803407 | MsG0880044307.01.T01:CDS | 65.0% | |
| GAGGAGGAGGAGGATGTCGG+TGG | + | Chr8:39802868-39802887 | None:intergenic | 65.0% | |
| GCCGTTGAAGTTCCCGTCGC+TGG | - | Chr8:39803276-39803295 | MsG0880044307.01.T01:CDS | 65.0% | |
| GGGGATGGTTGTGGAGGAGG+AGG | + | Chr8:39802881-39802900 | None:intergenic | 65.0% | |
| GGTGGGGATGGTTGTGGAGG+AGG | + | Chr8:39802884-39802903 | None:intergenic | 65.0% | |
| !! | GGGGGTTCCGTTGGTTCCGT+GGG | - | Chr8:39804424-39804443 | MsG0880044307.01.T01:CDS | 65.0% |
| !! | GGTGGTGGGGATGGTTGTGG+AGG | + | Chr8:39802887-39802906 | None:intergenic | 65.0% |
| !! | TGAAGGTGCGGTGGTGGGGA+TGG | + | Chr8:39802896-39802915 | None:intergenic | 65.0% |
| !! | TGCGGTGGTGGGGATGGTTG+TGG | + | Chr8:39802890-39802909 | None:intergenic | 65.0% |
| !! | GGGGGGTTCCGTTGGTTCCG+TGG | - | Chr8:39804423-39804442 | MsG0880044307.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 39802859 | 39804643 | 39802859 | ID=MsG0880044307.01;Name=MsG0880044307.01 |
| Chr8 | mRNA | 39802859 | 39804643 | 39802859 | ID=MsG0880044307.01.T01;Parent=MsG0880044307.01;Name=MsG0880044307.01.T01;_AED=0.26;_eAED=0.26;_QI=0|-1|0|1|-1|1|1|0|594 |
| Chr8 | exon | 39802859 | 39804643 | 39802859 | ID=MsG0880044307.01.T01:exon:16887;Parent=MsG0880044307.01.T01 |
| Chr8 | CDS | 39802859 | 39804643 | 39802859 | ID=MsG0880044307.01.T01:cds;Parent=MsG0880044307.01.T01 |
| Gene Sequence |
| Protein sequence |
